Cmc04g0096311 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc04g0096311
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Integrase catalytic domain-containing protein
Location	CMiso1.1chr04: 10514364 .. 10515431 (-)
RNA-Seq Expression	Cmc04g0096311
Synteny	Cmc04g0096311

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAATCCTTGTTCACACTCTCAATGGCCTTCAACGCATTTCGTACCTCTATTCGAACTCGCAGCGGCAACATCTCCCTTGAAGAACTTCACACCCTTCTCATTTCGAAAGAAACAACCATGGCCAAAACTTCAGCCATTGAAGCCATTCCAACAGCCATGACGGCGTTTCACCCACCTCAGCATCACGACAGCCGTGAACGAGAACACCGTTCCCACTCCACTGGTAACCCTAATTTTAATTCTTCCCCAAATTCTTCTAATCGTGGGATAAATTTTGCTTCAGGATCGCGTGGCTTAGGAAGCAACAATAATTTCGGTACACAGCCCAATCACTTTCGGCCCAATTACAATAATCATGGCCCATTTCTCCCATCATCTCACTTCACCCCAGTTCATCTCAATCAGCGTGGTATTATTGGGTCTTCTCCTTCACATGGGCCTAGCTTTAGGCCTGAAACAAATTCTGGATATAATGGTCGCATCTTTTGTCAAAAATGTCACAAACAAGGACATGGGGCTCTCGATTGCTATAATCGCATGTTCTCATATCAAGGCCGACATCCACCCTCCCAATTAGCGACAATGGCGGTAAACTCTATGAATTCTCAAATCTCTGGTGAAAATACTAACAATTTTTGGTTATCTGACAGTGGATGCAACGTTCACATGACAAATGAGTTAGCAAATCTCAATCTATCCAATAATTATAATGGTGAGGAAACTATCACAGTGGGAAATGGTCAACCTTTAAATATTAAAAATACCGGCAGTGGTAAACTCTTAACTCCCTCACATACCTTTAATTTTTCCAAAATACTCCATGCTCCTCAACTTGCTACAAATCTATTATCTGTTCACAAATTTTGTCTTGACAATAATTGCGTCTTTATTTTTTATACTGACTGGTTCCTCATTTGGGATAAAGTCACTGGCCAAACTCTCGATACCGGTGAAAGCATCAATGGTCTCTATCCTATTCCCAGTACTTCTACTCTATCCACATCCACCATGCATTCCAAATCTTTTAATTTTCATGCAAAACAGGAAGATTCATCATTATGA

mRNA sequence

ATGAAGAAATCCTTGTTCACACTCTCAATGGCCTTCAACGCATTTCGTACCTCTATTCGAACTCGCAGCGGCAACATCTCCCTTGAAGAACTTCACACCCTTCTCATTTCGAAAGAAACAACCATGGCCAAAACTTCAGCCATTGAAGCCATTCCAACAGCCATGACGGCGTTTCACCCACCTCAGCATCACGACAGCCGTGAACGAGAACACCGTTCCCACTCCACTGGTAACCCTAATTTTAATTCTTCCCCAAATTCTTCTAATCGTGGGATAAATTTTGCTTCAGGATCGCGTGGCTTAGGAAGCAACAATAATTTCGGTACACAGCCCAATCACTTTCGGCCCAATTACAATAATCATGGCCCATTTCTCCCATCATCTCACTTCACCCCAGTTCATCTCAATCAGCGTGGTATTATTGGGTCTTCTCCTTCACATGGGCCTAGCTTTAGGCCTGAAACAAATTCTGGATATAATGGTCGCATCTTTTGTCAAAAATGTCACAAACAAGGACATGGGGCTCTCGATTGCTATAATCGCATGTTCTCATATCAAGGCCGACATCCACCCTCCCAATTAGCGACAATGGCGGTAAACTCTATGAATTCTCAAATCTCTGGTGAAAATACTAACAATTTTTGGTTATCTGACAGTGGATGCAACGTTCACATGACAAATGAGTTAGCAAATCTCAATCTATCCAATAATTATAATGGTGAGGAAACTATCACAGTGGGAAATGGTCAACCTTTAAATATTAAAAATACCGGCAGTGGTAAACTCTTAACTCCCTCACATACCTTTAATTTTTCCAAAATACTCCATGCTCCTCAACTTGCTACAAATCTATTATCTGTTCACAAATTTTGTCTTGACAATAATTGCGTCTTTATTTTTTATACTGACTGGTTCCTCATTTGGGATAAAGTCACTGGCCAAACTCTCGATACCGGTGAAAGCATCAATGGTCTCTATCCTATTCCCAGTACTTCTACTCTATCCACATCCACCATGCATTCCAAATCTTTTAATTTTCATGCAAAACAGGAAGATTCATCATTATGA

Coding sequence (CDS)

ATGAAGAAATCCTTGTTCACACTCTCAATGGCCTTCAACGCATTTCGTACCTCTATTCGAACTCGCAGCGGCAACATCTCCCTTGAAGAACTTCACACCCTTCTCATTTCGAAAGAAACAACCATGGCCAAAACTTCAGCCATTGAAGCCATTCCAACAGCCATGACGGCGTTTCACCCACCTCAGCATCACGACAGCCGTGAACGAGAACACCGTTCCCACTCCACTGGTAACCCTAATTTTAATTCTTCCCCAAATTCTTCTAATCGTGGGATAAATTTTGCTTCAGGATCGCGTGGCTTAGGAAGCAACAATAATTTCGGTACACAGCCCAATCACTTTCGGCCCAATTACAATAATCATGGCCCATTTCTCCCATCATCTCACTTCACCCCAGTTCATCTCAATCAGCGTGGTATTATTGGGTCTTCTCCTTCACATGGGCCTAGCTTTAGGCCTGAAACAAATTCTGGATATAATGGTCGCATCTTTTGTCAAAAATGTCACAAACAAGGACATGGGGCTCTCGATTGCTATAATCGCATGTTCTCATATCAAGGCCGACATCCACCCTCCCAATTAGCGACAATGGCGGTAAACTCTATGAATTCTCAAATCTCTGGTGAAAATACTAACAATTTTTGGTTATCTGACAGTGGATGCAACGTTCACATGACAAATGAGTTAGCAAATCTCAATCTATCCAATAATTATAATGGTGAGGAAACTATCACAGTGGGAAATGGTCAACCTTTAAATATTAAAAATACCGGCAGTGGTAAACTCTTAACTCCCTCACATACCTTTAATTTTTCCAAAATACTCCATGCTCCTCAACTTGCTACAAATCTATTATCTGTTCACAAATTTTGTCTTGACAATAATTGCGTCTTTATTTTTTATACTGACTGGTTCCTCATTTGGGATAAAGTCACTGGCCAAACTCTCGATACCGGTGAAAGCATCAATGGTCTCTATCCTATTCCCAGTACTTCTACTCTATCCACATCCACCATGCATTCCAAATCTTTTAATTTTCATGCAAAACAGGAAGATTCATCATTATGA

Protein sequence

MKKSLFTLSMAFNAFRTSIRTRSGNISLEELHTLLISKETTMAKTSAIEAIPTAMTAFHPPQHHDSREREHRSHSTGNPNFNSSPNSSNRGINFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLPSSHFTPVHLNQRGIIGSSPSHGPSFRPETNSGYNGRIFCQKCHKQGHGALDCYNRMFSYQGRHPPSQLATMAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITVGNGQPLNIKNTGSGKLLTPSHTFNFSKILHAPQLATNLLSVHKFCLDNNCVFIFYTDWFLIWDKVTGQTLDTGESINGLYPIPSTSTLSTSTMHSKSFNFHAKQEDSSL

Homology

[Close]

BLAST of Cmc04g0096311 vs. NCBI nr
Match: KAA0067173.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK26022.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 535.0 bits (1377), Expect = 4.8e-148
Identity = 273/307 (88.93%), Postives = 280/307 (91.21%), Query Frame = 0


Query: 8   LSMAFNAFRTSIRTRSGNISLEELHTLLISKETTMAKTSAIEAIPTAMTAFHPPQHHDSR 67
           L ++FNAFRTSIRTRSGNISLEELHTLLIS+ETTMAKTSAIEAIPTAM AFHP QHH SR
Sbjct: 163 LPVSFNAFRTSIRTRSGNISLEELHTLLISEETTMAKTSAIEAIPTAMAAFHPSQHHSSR 222

Query: 68  EREHRSHSTGNPNFNSSPNSSNRGINFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLPS 127
            R  R HSTGNP FNSSPNSSNRGINFASGSRGL SNNNFGTQPNHF+PNYNNHGPFLP 
Sbjct: 223 GRGRRFHSTGNPIFNSSPNSSNRGINFASGSRGLESNNNFGTQPNHFQPNYNNHGPFLPP 282

Query: 128 SHFTPVHLNQRGIIGSSPSHGPSFRPETNSGYNGRIFCQKCHKQGHGALDCYNRM-FSYQ 187
           SHFTPVH NQRGIIGSSPSHGPSFR E NSGYNGRIFCQ CHKQ HGALDCYN M FSYQ
Sbjct: 283 SHFTPVHPNQRGIIGSSPSHGPSFRLEANSGYNGRIFCQICHKQEHGALDCYNHMNFSYQ 342

Query: 188 GRHPPSQLATMAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITV 247
            RH PSQLA MAVNSMNSQIS ENTNNFWLSDSG NVHMTNELANLNLSNNYNGEET+TV
Sbjct: 343 DRHSPSQLAAMAVNSMNSQISSENTNNFWLSDSGYNVHMTNELANLNLSNNYNGEETVTV 402

Query: 248 GNGQPLNIKNTGSGKLLTPSHTFNFSKILHAPQLATNLLSVHKFCLDNNCVFIFYTDWFL 307
           GNGQPLNI+NTGSGKL TPSHTFN SKILHAPQLATNLLSVHKFCLDNNCVF+FYTD FL
Sbjct: 403 GNGQPLNIENTGSGKLSTPSHTFNLSKILHAPQLATNLLSVHKFCLDNNCVFVFYTDGFL 462

Query: 308 IWDKVTG 314
           I DKVTG
Sbjct: 463 IQDKVTG 469

[Close]

BLAST of Cmc04g0096311 vs. NCBI nr
Match: XP_016902697.1 (PREDICTED: uncharacterized protein LOC107991825 [Cucumis melo])

HSP 1 Score: 530.0 bits (1364), Expect = 1.5e-146
Identity = 269/301 (89.37%), Postives = 277/301 (92.03%), Query Frame = 0


Query: 8   LSMAFNAFRTSIRTRSGNISLEELHTLLISKETTMAKTSAIEAIPTAMTAFHPPQHHDSR 67
           L  AFNAFRTSIRTR+GNISLEELHTLLIS+ET MAKTSAIEAIPTAM AFHPPQHH SR
Sbjct: 86  LPAAFNAFRTSIRTRNGNISLEELHTLLISEETIMAKTSAIEAIPTAMAAFHPPQHHGSR 145

Query: 68  EREHRSHSTGNPNFNSSPNSSNRGINFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLPS 127
            R  R HSTGNPNFNSS NSSNRG NFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFL  
Sbjct: 146 GRGRRFHSTGNPNFNSSSNSSNRGTNFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLSP 205

Query: 128 SHFTPVHLNQRGIIGSSPSHGPSFRPETNSGYNGRIFCQKCHKQGHGALDCYNRM-FSYQ 187
           S+FT VHLNQRGIIGSS SHGPSFRPETNSGYNGRIFCQ CHKQGH ALDCYNRM FSYQ
Sbjct: 206 SNFTSVHLNQRGIIGSSLSHGPSFRPETNSGYNGRIFCQICHKQGHVALDCYNRMNFSYQ 265

Query: 188 GRHPPSQLATMAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITV 247
           G+HPPSQL  MA+NSMNSQI GENTNNF LSDSGCNVHMTNELANLNLSNNYNGEET+TV
Sbjct: 266 GQHPPSQLVAMAINSMNSQIFGENTNNFLLSDSGCNVHMTNELANLNLSNNYNGEETVTV 325

Query: 248 GNGQPLNIKNTGSGKLLTPSHTFNFSKILHAPQLATNLLSVHKFCLDNNCVFIFYTDWFL 307
           GNGQP+NI+NTGSGKLLTPSHTFN SKILHAPQLATNLLSVHKFCLDNNCVFIF TDWFL
Sbjct: 326 GNGQPINIENTGSGKLLTPSHTFNLSKILHAPQLATNLLSVHKFCLDNNCVFIFDTDWFL 385

[Close]

BLAST of Cmc04g0096311 vs. NCBI nr
Match: TYK06402.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 440.7 bits (1132), Expect = 1.2e-119
Identity = 225/253 (88.93%), Postives = 230/253 (90.91%), Query Frame = 0


Query: 8   LSMAFNAFRTSIRTRSGNISLEELHTLLISKETTMAKTSAIEAIPTAMTAFHPPQHHDSR 67
           L  AFNAFRTSIRTR+ NISLEELHTL IS+ETTMAKTSAIEAIPTAM AFHPPQHHDSR
Sbjct: 74  LLAAFNAFRTSIRTRNDNISLEELHTLFISEETTMAKTSAIEAIPTAMAAFHPPQHHDSR 133

Query: 68  EREHRSHSTGNPNFNSSPNSSNRGINFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLPS 127
            R  R HSTGNPNFNSSPNSSNRG NFASGSRGLGSNNNFGTQPNHFRPNYNNH  FLP 
Sbjct: 134 GRGRRFHSTGNPNFNSSPNSSNRGTNFASGSRGLGSNNNFGTQPNHFRPNYNNHDRFLPP 193

Query: 128 SHFTPVHLNQRGIIGSSPSHGPSFRPETNSGYNGRIFCQKCHKQGHGALDCYNRM-FSYQ 187
           SHFT VH NQRGIIGSSPS+GPSFRPETN GYNGRIFCQ CHKQGHGALDCYNRM FSYQ
Sbjct: 194 SHFTSVHPNQRGIIGSSPSYGPSFRPETNFGYNGRIFCQICHKQGHGALDCYNRMNFSYQ 253

Query: 188 GRHPPSQLATMAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITV 247
           GRHPPSQLA M VNSMNSQISGENTNNFWL DSGCNVHMTNELANLNLSNNYNGEET+TV
Sbjct: 254 GRHPPSQLAAMTVNSMNSQISGENTNNFWLPDSGCNVHMTNELANLNLSNNYNGEETVTV 313

Query: 248 GNGQPLNIKNTGS 260
            N QPLNI+NTGS
Sbjct: 314 ENSQPLNIENTGS 326

[Close]

BLAST of Cmc04g0096311 vs. NCBI nr
Match: KAA0050146.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 440.7 bits (1132), Expect = 1.2e-119
Identity = 225/253 (88.93%), Postives = 230/253 (90.91%), Query Frame = 0


Query: 8   LSMAFNAFRTSIRTRSGNISLEELHTLLISKETTMAKTSAIEAIPTAMTAFHPPQHHDSR 67
           L  AFNAFRTSIRTR+ NISLEELHTL IS+ETTMAKTSAIEAIPTAM AFHPPQHHDSR
Sbjct: 74  LLAAFNAFRTSIRTRNDNISLEELHTLFISEETTMAKTSAIEAIPTAMAAFHPPQHHDSR 133

Query: 68  EREHRSHSTGNPNFNSSPNSSNRGINFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLPS 127
            R  R HSTGNPNFNSSPNSSNRG NFASGSRGLGSNNNFGTQPNHFRPNYNNH  FLP 
Sbjct: 134 GRGRRFHSTGNPNFNSSPNSSNRGTNFASGSRGLGSNNNFGTQPNHFRPNYNNHDRFLPP 193

Query: 128 SHFTPVHLNQRGIIGSSPSHGPSFRPETNSGYNGRIFCQKCHKQGHGALDCYNRM-FSYQ 187
           SHFT VH NQRGIIGSSPS+GPSFRPETN GYNGRIFCQ CHKQGHGALDCYNRM FSYQ
Sbjct: 194 SHFTSVHPNQRGIIGSSPSYGPSFRPETNFGYNGRIFCQICHKQGHGALDCYNRMNFSYQ 253

Query: 188 GRHPPSQLATMAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITV 247
           GRHPPSQLA M VNSMNSQISGENTNNFWL DSGCNVHMTNELANLNLSNNYNGEET+TV
Sbjct: 254 GRHPPSQLAAMTVNSMNSQISGENTNNFWLPDSGCNVHMTNELANLNLSNNYNGEETVTV 313

Query: 248 GNGQPLNIKNTGS 260
            N QPLNI+NTGS
Sbjct: 314 ENSQPLNIENTGS 326

[Close]

BLAST of Cmc04g0096311 vs. NCBI nr
Match: XP_022158189.1 (uncharacterized protein LOC111024722 [Momordica charantia])

HSP 1 Score: 195.3 bits (495), Expect = 9.0e-46
Identity = 98/155 (63.23%), Postives = 118/155 (76.13%), Query Frame = 0


Query: 197 MAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITVGNGQPLNIKN 256
           MAVN+M    S    NNFWLSDSGCN H+TN+L NLNL ++YNGEE +TVGNGQ LNI +
Sbjct: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60

Query: 257 TGSGKLLTPSHTFNFSKILHAPQLATNLLSVHKFCLDNNCVFIFYTDWFLIWDKVTGQTL 316
           TGSG L   SH F  S +LHAP LATNLLSVHKFCLDN+C+F++ +DWFLI DKVT  TL
Sbjct: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTL 120

Query: 317 DTGESINGLYPIPSTSTLST--STMHSKSFNFHAK 350
             G+S+NGLYPIPS+STLS+  + +H K+    AK
Sbjct: 121 YKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAK 155

[Close]

BLAST of Cmc04g0096311 vs. ExPASy TrEMBL
Match: A0A5A7VGG0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1567G00280 PE=4 SV=1)

HSP 1 Score: 535.0 bits (1377), Expect = 2.3e-148
Identity = 273/307 (88.93%), Postives = 280/307 (91.21%), Query Frame = 0


Query: 8   LSMAFNAFRTSIRTRSGNISLEELHTLLISKETTMAKTSAIEAIPTAMTAFHPPQHHDSR 67
           L ++FNAFRTSIRTRSGNISLEELHTLLIS+ETTMAKTSAIEAIPTAM AFHP QHH SR
Sbjct: 163 LPVSFNAFRTSIRTRSGNISLEELHTLLISEETTMAKTSAIEAIPTAMAAFHPSQHHSSR 222

Query: 68  EREHRSHSTGNPNFNSSPNSSNRGINFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLPS 127
            R  R HSTGNP FNSSPNSSNRGINFASGSRGL SNNNFGTQPNHF+PNYNNHGPFLP 
Sbjct: 223 GRGRRFHSTGNPIFNSSPNSSNRGINFASGSRGLESNNNFGTQPNHFQPNYNNHGPFLPP 282

Query: 128 SHFTPVHLNQRGIIGSSPSHGPSFRPETNSGYNGRIFCQKCHKQGHGALDCYNRM-FSYQ 187
           SHFTPVH NQRGIIGSSPSHGPSFR E NSGYNGRIFCQ CHKQ HGALDCYN M FSYQ
Sbjct: 283 SHFTPVHPNQRGIIGSSPSHGPSFRLEANSGYNGRIFCQICHKQEHGALDCYNHMNFSYQ 342

Query: 188 GRHPPSQLATMAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITV 247
            RH PSQLA MAVNSMNSQIS ENTNNFWLSDSG NVHMTNELANLNLSNNYNGEET+TV
Sbjct: 343 DRHSPSQLAAMAVNSMNSQISSENTNNFWLSDSGYNVHMTNELANLNLSNNYNGEETVTV 402

Query: 248 GNGQPLNIKNTGSGKLLTPSHTFNFSKILHAPQLATNLLSVHKFCLDNNCVFIFYTDWFL 307
           GNGQPLNI+NTGSGKL TPSHTFN SKILHAPQLATNLLSVHKFCLDNNCVF+FYTD FL
Sbjct: 403 GNGQPLNIENTGSGKLSTPSHTFNLSKILHAPQLATNLLSVHKFCLDNNCVFVFYTDGFL 462

Query: 308 IWDKVTG 314
           I DKVTG
Sbjct: 463 IQDKVTG 469

[Close]

BLAST of Cmc04g0096311 vs. ExPASy TrEMBL
Match: A0A1S4E394 (uncharacterized protein LOC107991825 OS=Cucumis melo OX=3656 GN=LOC107991825 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 7.5e-147
Identity = 269/301 (89.37%), Postives = 277/301 (92.03%), Query Frame = 0


Query: 8   LSMAFNAFRTSIRTRSGNISLEELHTLLISKETTMAKTSAIEAIPTAMTAFHPPQHHDSR 67
           L  AFNAFRTSIRTR+GNISLEELHTLLIS+ET MAKTSAIEAIPTAM AFHPPQHH SR
Sbjct: 86  LPAAFNAFRTSIRTRNGNISLEELHTLLISEETIMAKTSAIEAIPTAMAAFHPPQHHGSR 145

Query: 68  EREHRSHSTGNPNFNSSPNSSNRGINFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLPS 127
            R  R HSTGNPNFNSS NSSNRG NFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFL  
Sbjct: 146 GRGRRFHSTGNPNFNSSSNSSNRGTNFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLSP 205

Query: 128 SHFTPVHLNQRGIIGSSPSHGPSFRPETNSGYNGRIFCQKCHKQGHGALDCYNRM-FSYQ 187
           S+FT VHLNQRGIIGSS SHGPSFRPETNSGYNGRIFCQ CHKQGH ALDCYNRM FSYQ
Sbjct: 206 SNFTSVHLNQRGIIGSSLSHGPSFRPETNSGYNGRIFCQICHKQGHVALDCYNRMNFSYQ 265

Query: 188 GRHPPSQLATMAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITV 247
           G+HPPSQL  MA+NSMNSQI GENTNNF LSDSGCNVHMTNELANLNLSNNYNGEET+TV
Sbjct: 266 GQHPPSQLVAMAINSMNSQIFGENTNNFLLSDSGCNVHMTNELANLNLSNNYNGEETVTV 325

Query: 248 GNGQPLNIKNTGSGKLLTPSHTFNFSKILHAPQLATNLLSVHKFCLDNNCVFIFYTDWFL 307
           GNGQP+NI+NTGSGKLLTPSHTFN SKILHAPQLATNLLSVHKFCLDNNCVFIF TDWFL
Sbjct: 326 GNGQPINIENTGSGKLLTPSHTFNLSKILHAPQLATNLLSVHKFCLDNNCVFIFDTDWFL 385

[Close]

BLAST of Cmc04g0096311 vs. ExPASy TrEMBL
Match: A0A5A7U7J4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001750 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 6.0e-120
Identity = 225/253 (88.93%), Postives = 230/253 (90.91%), Query Frame = 0


Query: 8   LSMAFNAFRTSIRTRSGNISLEELHTLLISKETTMAKTSAIEAIPTAMTAFHPPQHHDSR 67
           L  AFNAFRTSIRTR+ NISLEELHTL IS+ETTMAKTSAIEAIPTAM AFHPPQHHDSR
Sbjct: 74  LLAAFNAFRTSIRTRNDNISLEELHTLFISEETTMAKTSAIEAIPTAMAAFHPPQHHDSR 133

Query: 68  EREHRSHSTGNPNFNSSPNSSNRGINFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLPS 127
            R  R HSTGNPNFNSSPNSSNRG NFASGSRGLGSNNNFGTQPNHFRPNYNNH  FLP 
Sbjct: 134 GRGRRFHSTGNPNFNSSPNSSNRGTNFASGSRGLGSNNNFGTQPNHFRPNYNNHDRFLPP 193

Query: 128 SHFTPVHLNQRGIIGSSPSHGPSFRPETNSGYNGRIFCQKCHKQGHGALDCYNRM-FSYQ 187
           SHFT VH NQRGIIGSSPS+GPSFRPETN GYNGRIFCQ CHKQGHGALDCYNRM FSYQ
Sbjct: 194 SHFTSVHPNQRGIIGSSPSYGPSFRPETNFGYNGRIFCQICHKQGHGALDCYNRMNFSYQ 253

Query: 188 GRHPPSQLATMAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITV 247
           GRHPPSQLA M VNSMNSQISGENTNNFWL DSGCNVHMTNELANLNLSNNYNGEET+TV
Sbjct: 254 GRHPPSQLAAMTVNSMNSQISGENTNNFWLPDSGCNVHMTNELANLNLSNNYNGEETVTV 313

Query: 248 GNGQPLNIKNTGS 260
            N QPLNI+NTGS
Sbjct: 314 ENSQPLNIENTGS 326

[Close]

BLAST of Cmc04g0096311 vs. ExPASy TrEMBL
Match: A0A5D3C579 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001010 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 6.0e-120
Identity = 225/253 (88.93%), Postives = 230/253 (90.91%), Query Frame = 0


Query: 8   LSMAFNAFRTSIRTRSGNISLEELHTLLISKETTMAKTSAIEAIPTAMTAFHPPQHHDSR 67
           L  AFNAFRTSIRTR+ NISLEELHTL IS+ETTMAKTSAIEAIPTAM AFHPPQHHDSR
Sbjct: 74  LLAAFNAFRTSIRTRNDNISLEELHTLFISEETTMAKTSAIEAIPTAMAAFHPPQHHDSR 133

Query: 68  EREHRSHSTGNPNFNSSPNSSNRGINFASGSRGLGSNNNFGTQPNHFRPNYNNHGPFLPS 127
            R  R HSTGNPNFNSSPNSSNRG NFASGSRGLGSNNNFGTQPNHFRPNYNNH  FLP 
Sbjct: 134 GRGRRFHSTGNPNFNSSPNSSNRGTNFASGSRGLGSNNNFGTQPNHFRPNYNNHDRFLPP 193

Query: 128 SHFTPVHLNQRGIIGSSPSHGPSFRPETNSGYNGRIFCQKCHKQGHGALDCYNRM-FSYQ 187
           SHFT VH NQRGIIGSSPS+GPSFRPETN GYNGRIFCQ CHKQGHGALDCYNRM FSYQ
Sbjct: 194 SHFTSVHPNQRGIIGSSPSYGPSFRPETNFGYNGRIFCQICHKQGHGALDCYNRMNFSYQ 253

Query: 188 GRHPPSQLATMAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITV 247
           GRHPPSQLA M VNSMNSQISGENTNNFWL DSGCNVHMTNELANLNLSNNYNGEET+TV
Sbjct: 254 GRHPPSQLAAMTVNSMNSQISGENTNNFWLPDSGCNVHMTNELANLNLSNNYNGEETVTV 313

Query: 248 GNGQPLNIKNTGS 260
            N QPLNI+NTGS
Sbjct: 314 ENSQPLNIENTGS 326

[Close]

BLAST of Cmc04g0096311 vs. ExPASy TrEMBL
Match: A0A6J1DYN6 (uncharacterized protein LOC111024722 OS=Momordica charantia OX=3673 GN=LOC111024722 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.4e-46
Identity = 98/155 (63.23%), Postives = 118/155 (76.13%), Query Frame = 0


Query: 197 MAVNSMNSQISGENTNNFWLSDSGCNVHMTNELANLNLSNNYNGEETITVGNGQPLNIKN 256
           MAVN+M    S    NNFWLSDSGCN H+TN+L NLNL ++YNGEE +TVGNGQ LNI +
Sbjct: 1   MAVNAMTPSSSSNTHNNFWLSDSGCNAHVTNDLDNLNLVDSYNGEEFVTVGNGQSLNISH 60

Query: 257 TGSGKLLTPSHTFNFSKILHAPQLATNLLSVHKFCLDNNCVFIFYTDWFLIWDKVTGQTL 316
           TGSG L   SH F  S +LHAP LATNLLSVHKFCLDN+C+F++ +DWFLI DKVT  TL
Sbjct: 61  TGSGILSASSHAFTISNVLHAPDLATNLLSVHKFCLDNHCIFVYDSDWFLIQDKVTDTTL 120

Query: 317 DTGESINGLYPIPSTSTLST--STMHSKSFNFHAK 350
             G+S+NGLYPIPS+STLS+  + +H K+    AK
Sbjct: 121 YKGKSVNGLYPIPSSSTLSSARNELHPKNCALLAK 155

The following BLAST results are available for this feature:

BLAST of Cmc04g0096311 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067173.1	4.8e-148	88.93	retrotransposon protein [Cucumis melo var. makuwa] >TYK26022.1 retrotransposon p...	[more]
XP_016902697.1	1.5e-146	89.37	PREDICTED: uncharacterized protein LOC107991825 [Cucumis melo]	[more]
TYK06402.1	1.2e-119	88.93	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0050146.1	1.2e-119	88.93	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
XP_022158189.1	9.0e-46	63.23	uncharacterized protein LOC111024722 [Momordica charantia]	[more]

BLAST of Cmc04g0096311 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc04g0096311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VGG0	2.3e-148	88.93	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E394	7.5e-147	89.37	uncharacterized protein LOC107991825 OS=Cucumis melo OX=3656 GN=LOC107991825 PE=...	[more]
A0A5A7U7J4	6.0e-120	88.93	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3C579	6.0e-120	88.93	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6J1DYN6	4.4e-46	63.23	uncharacterized protein LOC111024722 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Cmc04g0096311 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..75
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..121
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 7..285

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc04g0096311.1	Cmc04g0096311.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding