Cmc03g0085381 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0085381
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Zinc finger CCCH domain-containing protein 20
Location	CMiso1.1chr03: 29192199 .. 29194095 (+)
RNA-Seq Expression	Cmc03g0085381
Synteny	Cmc03g0085381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAATAAGGAAAAGTACAAATAATTATATATATATTATATCTTAAACTTGAAGCCAAGAGAGTAGGGGAGGAAAAAAGAAAAAAGAAGGTGCAGGAAATTAGCATGGAGAGGAGAACAGAGAAGCATATCCCAGGGATTGGGTAGATATTTAACTGGAGAGAATAGAGAGGAAGTTGAGTAACCGACCGCGGTTGAAAACCAAAAATCCCTCCACCCTCTCTTCCGGCTTCCGTCTCAAAAACTGGCACTTCCCATCCCATCTTCAAAAACCCTTCCACTCCATTTCTCTCTCACAACTCACCATGATCGCCGAATCAATGCTCCTCAATCCCACGGCTCACATTTCAACCTGGGACTCCCTCGACGATCCCTCCGCCGCAATCTCTTCCTATTTCTCCGCCGGCCACGTGTCCCCCCTCGATTCCCCAACGGCGGCGCTCATGGATTTCGATTCCTCCTTATGGGAAGATCCTGACTTGCCGGCGCCTGTGGACGGCTTCTCGTGTGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCTCGTGCGCTCGTGGCAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGCCGAGATCCCAGGAAGTTCAACTATTCAGGCGCCGAGTGCCCGGATTTACGTCATGGGTGTTGTAAAAAGGGAGATGCCTGCGAGTACGCTCATGGAACTTTCGAAATTTGGCTCCACCCAGACCGATACCGGACACAACCTTGCCGTGACGGAACTGGCTGTCGACGGCGGGTCTGTTTCTTCGCCCACACGTCGGAGCAACTCCGGATTCCGGGGAAACAAAGTGTCAGGTCTCCACGGGCGAGAGAAATCGCTGTCCCTGCTGTGTCATCGCCGACGTCGATCCTGTTATCGCCGTCTTCGGACTCGCCGCCTCTGTCTCCAATCAGCCCTGTAATCAGTGGCGGCGAATCATTCAGCCGATTAGTTGCATTGATGCACAGCCTCCGCCTGGATGAATTAAAAACAAATCCTGGAGTCTCCAGCTTCAGTCCAAATCTCCGTCGGAACTCCGGTGCATTTGATCTGTGGGATAGAGAAAATGAAGAAGAACCAGCAATGGAAAGAGTGGAATCAGGAAGAAATCTAAGAGCCCAAATGTACGCGAAATTAATGAGAGAGAATTCAGTGGACCGAGTCCGGCCACTGATATCAGCCGGATCTCAGAACTAATTCGAGGAAGAAGAAGAAGAAGAAGCCATGGATTCGAATTTTTACTTTAATTGAGTTTCTGTGAATCAAATCCTTTTCCTCCCATTTCTTTTTTTCTTCTTCTTTTTTTTCGTATTTTGTATTTTTAGTTTCTACTAATTTCTGTAAATGGGTTTAATGTTAATTTGTGGAGGTAAGTGAGTGAGTTACAATTTCCCCCCCATTTGTACAGAAACTGAATGGGAATTTAATAAAATTTCTTTCTCGACTATAATATAATATGAAGATCGAACAATGTCCAAAGGGGTAAGTTTAACGTAAAATGTATTAGAGAAGAAGGATAAGTTTCGAAGTTGAAATAGTGAAGATGAAGGAATTTGTACAAAATCCAAAACTTGCTTTTCAATCCTGCTGCTGCTGCGGTGGCGGCTCACTCAATCAATATCCTTGTTTCTACCTACTTTAAATATGCTTCATTCTGTCTTCTTTAGAACTAGCTAATCCACTTTGTAACTGCTTCCTAAGTGTGTCGTTCACTCTTGTGCGAGCTCTTTTTTGGTTATTTTTCTTCTCAGTCAAAGAGTTTGTAATTTTGGTTAATAATTTTGTAATTTTGAATGCACAAATCTCTGGGTTTGAGAAACTAAATTTATTGATTGATTGATTGAATGGGAAGTTTGATTATGATTTAAT

mRNA sequence

TTTAATAAGGAAAAGTACAAATAATTATATATATATTATATCTTAAACTTGAAGCCAAGAGAGTAGGGGAGGAAAAAAGAAAAAAGAAGGTGCAGGAAATTAGCATGGAGAGGAGAACAGAGAAGCATATCCCAGGGATTGGGTAGATATTTAACTGGAGAGAATAGAGAGGAAGTTGAGTAACCGACCGCGGTTGAAAACCAAAAATCCCTCCACCCTCTCTTCCGGCTTCCGTCTCAAAAACTGGCACTTCCCATCCCATCTTCAAAAACCCTTCCACTCCATTTCTCTCTCACAACTCACCATGATCGCCGAATCAATGCTCCTCAATCCCACGGCTCACATTTCAACCTGGGACTCCCTCGACGATCCCTCCGCCGCAATCTCTTCCTATTTCTCCGCCGGCCACGTGTCCCCCCTCGATTCCCCAACGGCGGCGCTCATGGATTTCGATTCCTCCTTATGGGAAGATCCTGACTTGCCGGCGCCTGTGGACGGCTTCTCGTGTGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCTCGTGCGCTCGTGGCAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGCCGAGATCCCAGGAAGTTCAACTATTCAGGCGCCGAGTGCCCGGATTTACGTCATGGGTGTTGTAAAAAGGGAGATGCCTGCGAGTACGCTCATGGAACTTTCGAAATTTGGCTCCACCCAGACCGATACCGGACACAACCTTGCCGTGACGGAACTGGCTGTCGACGGCGGGTCTGTTTCTTCGCCCACACGTCGGAGCAACTCCGGATTCCGGGGAAACAAAGTGTCAGGTCTCCACGGGCGAGAGAAATCGCTGTCCCTGCTGTGTCATCGCCGACGTCGATCCTGTTATCGCCGTCTTCGGACTCGCCGCCTCTGTCTCCAATCAGCCCTGTAATCAGTGGCGGCGAATCATTCAGCCGATTAGTTGCATTGATGCACAGCCTCCGCCTGGATGAATTAAAAACAAATCCTGGAGTCTCCAGCTTCAGTCCAAATCTCCGTCGGAACTCCGGTGCATTTGATCTGTGGGATAGAGAAAATGAAGAAGAACCAGCAATGGAAAGAGTGGAATCAGGAAGAAATCTAAGAGCCCAAATGTACGCGAAATTAATGAGAGAGAATTCAGTGGACCGAGTCCGGCCACTGATATCAGCCGGATCTCAGAACTAATTCGAGGAAGAAGAAGAAGAAGAAGCCATGGATTCGAATTTTTACTTTAATTGAGTTTCTGTGAATCAAATCCTTTTCCTCCCATTTCTTTTTTTCTTCTTCTTTTTTTTCGTATTTTGTATTTTTAGTTTCTACTAATTTCTGTAAATGGGTTTAATGTTAATTTGTGGAGGTAAGTGAGTGAGTTACAATTTCCCCCCCATTTGTACAGAAACTGAATGGGAATTTAATAAAATTTCTTTCTCGACTATAATATAATATGAAGATCGAACAATGTCCAAAGGGGTAAGTTTAACGTAAAATGTATTAGAGAAGAAGGATAAGTTTCGAAGTTGAAATAGTGAAGATGAAGGAATTTGTACAAAATCCAAAACTTGCTTTTCAATCCTGCTGCTGCTGCGGTGGCGGCTCACTCAATCAATATCCTTGTTTCTACCTACTTTAAATATGCTTCATTCTGTCTTCTTTAGAACTAGCTAATCCACTTTGTAACTGCTTCCTAAGTGTGTCGTTCACTCTTGTGCGAGCTCTTTTTTGGTTATTTTTCTTCTCAGTCAAAGAGTTTGTAATTTTGGTTAATAATTTTGTAATTTTGAATGCACAAATCTCTGGGTTTGAGAAACTAAATTTATTGATTGATTGATTGAATGGGAAGTTTGATTATGATTTAAT

Coding sequence (CDS)

ATGATCGCCGAATCAATGCTCCTCAATCCCACGGCTCACATTTCAACCTGGGACTCCCTCGACGATCCCTCCGCCGCAATCTCTTCCTATTTCTCCGCCGGCCACGTGTCCCCCCTCGATTCCCCAACGGCGGCGCTCATGGATTTCGATTCCTCCTTATGGGAAGATCCTGACTTGCCGGCGCCTGTGGACGGCTTCTCGTGTGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCTCGTGCGCTCGTGGCAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGCCGAGATCCCAGGAAGTTCAACTATTCAGGCGCCGAGTGCCCGGATTTACGTCATGGGTGTTGTAAAAAGGGAGATGCCTGCGAGTACGCTCATGGAACTTTCGAAATTTGGCTCCACCCAGACCGATACCGGACACAACCTTGCCGTGACGGAACTGGCTGTCGACGGCGGGTCTGTTTCTTCGCCCACACGTCGGAGCAACTCCGGATTCCGGGGAAACAAAGTGTCAGGTCTCCACGGGCGAGAGAAATCGCTGTCCCTGCTGTGTCATCGCCGACGTCGATCCTGTTATCGCCGTCTTCGGACTCGCCGCCTCTGTCTCCAATCAGCCCTGTAATCAGTGGCGGCGAATCATTCAGCCGATTAGTTGCATTGATGCACAGCCTCCGCCTGGATGAATTAAAAACAAATCCTGGAGTCTCCAGCTTCAGTCCAAATCTCCGTCGGAACTCCGGTGCATTTGATCTGTGGGATAGAGAAAATGAAGAAGAACCAGCAATGGAAAGAGTGGAATCAGGAAGAAATCTAAGAGCCCAAATGTACGCGAAATTAATGAGAGAGAATTCAGTGGACCGAGTCCGGCCACTGATATCAGCCGGATCTCAGAACTAA

Protein sequence

MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLPAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVRSPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTNPGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLISAGSQN

Homology

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BLAST of Cmc03g0085381 vs. NCBI nr
Match: KAA0060981.1 (zinc finger CCCH domain-containing protein 20 [Cucumis melo var. makuwa])

HSP 1 Score: 629.8 bits (1623), Expect = 1.2e-176
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300
           PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI
Sbjct: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300

Query: 301 SAGSQN 307
           SAGSQN
Sbjct: 301 SAGSQN 306

[Close]

BLAST of Cmc03g0085381 vs. NCBI nr
Match: XP_008444505.1 (PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 [Cucumis melo])

HSP 1 Score: 624.8 bits (1610), Expect = 4.0e-175
Identity = 304/306 (99.35%), Postives = 304/306 (99.35%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGES SRLVALMHSLRLDE KTN
Sbjct: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESSSRLVALMHSLRLDEXKTN 240

Query: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300
           PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI
Sbjct: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300

Query: 301 SAGSQN 307
           SAGSQN
Sbjct: 301 SAGSQN 306

[Close]

BLAST of Cmc03g0085381 vs. NCBI nr
Match: KGN62412.1 (hypothetical protein Csa_018765 [Cucumis sativus])

HSP 1 Score: 607.8 bits (1566), Expect = 5.0e-170
Identity = 295/307 (96.09%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRARE+A+PAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRNSG-AFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPL 300
           PGVSSFSPNLRR+SG AFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRP+
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ISAGSQN 307
           ISAGS N
Sbjct: 301 ISAGSLN 307

[Close]

BLAST of Cmc03g0085381 vs. NCBI nr
Match: NP_001295793.1 (zinc finger CCCH domain-containing protein 20 [Cucumis sativus] >CAI30889.1 putative CCCH-type zinc finger protein CsSEF1 [Cucumis sativus])

HSP 1 Score: 602.8 bits (1553), Expect = 1.6e-168
Identity = 293/307 (95.44%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRARE+A+PAVSSPTSILLSPSSDSPPLSPISPVISGGES SRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESLSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRNSG-AFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPL 300
           PGVSSFSPNLRR+SG AFDLWDR NEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRP+
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRGNEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ISAGSQN 307
           ISAGS N
Sbjct: 301 ISAGSLN 307

[Close]

BLAST of Cmc03g0085381 vs. NCBI nr
Match: KAG7029281.1 (Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 552.7 bits (1423), Expect = 1.9e-153
Identity = 261/306 (85.29%), Postives = 280/306 (91.50%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MI ESM LNPT HIS+WDSLDDP+AAI SYF+AG+VSPLDSPTAA+MD+DSSLWED DLP
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSLWEDQDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           A VD F+CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKF YSG ECPDLR
Sbjct: 61  AMVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFKYSGTECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG GCRRRVCFFAH+SEQLRIPGKQS+R
Sbjct: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAGCRRRVCFFAHSSEQLRIPGKQSIR 180

Query: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPR REIA  AVSSPTSIL+S SSDSPP+SPISP+ +GGESFSRLVALMH+L  DELKTN
Sbjct: 181 SPRGREIAASAVSSPTSILISSSSDSPPMSPISPLTTGGESFSRLVALMHNLHFDELKTN 240

Query: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300
           PG+S F PN RRNSGAFD WDR+NEEEPAMERVESGRNLRAQMYAKLMRENSV+RVRPLI
Sbjct: 241 PGISGFGPNFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRENSVERVRPLI 300

Query: 301 SAGSQN 307
            AGS+N
Sbjct: 301 LAGSRN 306

[Close]

BLAST of Cmc03g0085381 vs. ExPASy Swiss-Prot
Match: O82199 (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=At2g19810 PE=2 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.0e-73
Identity = 153/340 (45.00%), Postives = 197/340 (57.94%), Query Frame = 0


Query: 1   MIAESML-LNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDL 60
           MI ES    NPT HI  W   +D + +   Y S    S +    A L  +  S   DPD 
Sbjct: 2   MIGESHRGFNPTVHIPPWPLSEDLTVS-DIYGSPDGGSSMMEALAELQRYLPSNEPDPDS 61

Query: 61  -------PAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYS 120
                   +P+D ++CD FRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPRKF+YS
Sbjct: 62  DPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYS 121

Query: 121 GAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLR 180
           G  CP+ R GCCK+GDACE++HG FE WLHP RYRTQPC+DG  CRRRVCFFAH+ +Q+R
Sbjct: 122 GTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIR 181

Query: 181 IPGKQSVRSPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSR-------- 240
           +   QS     + ++  P +       +SPSS+SPP+SP     S     SR        
Sbjct: 182 VLPNQSPDRVDSFDVLSPTIRRAFQFSISPSSNSPPVSPRGDSDSSCSLLSRSLGSNLGN 241

Query: 241 -LVALMHSLRLDELKTN-------------------------PGVSSFSPNLRRNSGAFD 299
            +VA + +L+L+++K++                         PG  S  P      G  +
Sbjct: 242 DVVASLRNLQLNKVKSSLSSSYNNQIGGYGSGFGSPRGSVLGPGFRSL-PTTPTRPGFMN 301

[Close]

BLAST of Cmc03g0085381 vs. ExPASy Swiss-Prot
Match: O82307 (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN=At2g25900 PE=2 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.0e-69
Identity = 157/318 (49.37%), Postives = 201/318 (63.21%), Query Frame = 0


Query: 9   NPTAHISTWDSLDDPSAAISSYFSAGHVSPLD----SPTAALMDFDS--------SLWED 68
           +PT HI  WD ++DP+A ISS FS+ +++ ++    SP+  L  F S         L  D
Sbjct: 11  HPTIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTND 70

Query: 69  PDLPAP------VDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 128
            D  +        D FS D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+
Sbjct: 71  SDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFH 130

Query: 129 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQ 188
           YSG  CP+ R G C++GD+CE++HG FE WLHP RYRTQPC+DGT CRRR+CFFAHT+EQ
Sbjct: 131 YSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQ 190

Query: 189 LRIPGKQSVRSPRAREIAVPAVSSPTSILLSPS----SDSPPLSPISPVISGGESFSRLV 248
           LR+        P     +  A +SPTSIL+SPS    S+SPPLSP         S   L+
Sbjct: 191 LRV--LPCSLDPDLGFFSGLA-TSPTSILVSPSFSPPSESPPLSP---------STGELI 250

Query: 249 ALMHSLRLDE---LKTNPGVSS----FSPNLRRNSGAFDLWDR----ENEEEPAMERVES 294
           A M  ++L+      ++P  S+    FS +LR    A   W R    E EE PAME VES
Sbjct: 251 ASMRKMQLNGGGCSWSSPMRSAVRLPFSSSLRPIQAA--TWPRIREFEIEEAPAMEFVES 310

[Close]

BLAST of Cmc03g0085381 vs. ExPASy Swiss-Prot
Match: Q9M0G2 (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN=At4g29190 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.1e-66
Identity = 148/336 (44.05%), Postives = 189/336 (56.25%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWED---- 60
           MI E+    PT  I  W  L++     S +FS    SP  S   AL      L  +    
Sbjct: 2   MIGETRRTYPTVEIPPWPVLEE--LTTSEFFSPVMNSPDCSMLEALAGLQRYLPSNEPDP 61

Query: 61  ---PDL---PAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 120
              PDL    +P+D +SCD FRMY+FKVR CARGRSHDWT+CPYAH GEKARRRDPRK++
Sbjct: 62  ESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYH 121

Query: 121 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQ 180
           YSG  CPD R G CKKGD+CE+AHG FE WLHP RYRTQPC+DG  C R++CFFAH+ +Q
Sbjct: 122 YSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQ 181

Query: 181 LRIPGKQSVRSPRAREIAVPAVSSPTSILLSPSSDSPPLSP-----ISPVIS------GG 240
           LR    +S     + +++ P  +    + +SP S SPP+SP      SP+        G 
Sbjct: 182 LRFLHTRSPDRVDSFDVSSPIRARAFQLSISPVSGSPPMSPRADSESSPMTQSLSRSLGS 241

Query: 241 ESFSRLVALMHSLRLDELKT------------------NPGVSSFSPNLRRNSGAFDLWD 297
            S + +V    +L+ + +K+                   PG  S  P      G  D+W+
Sbjct: 242 CSINDVVPSFRNLQFNSVKSFPRNNPLFGFGSPRGSILGPGFQSL-PTTPTRPGNLDIWE 301

[Close]

BLAST of Cmc03g0085381 vs. ExPASy Swiss-Prot
Match: Q9FU27 (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0192000 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.6e-60
Identity = 140/306 (45.75%), Postives = 177/306 (57.84%), Query Frame = 0


Query: 59  LPAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPD 118
           + A VD ++CD+FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPRK++YSG  CPD
Sbjct: 65  MAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPD 124

Query: 119 LRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRI-PGKQ 178
            R G CK+GDACEYAHG FE WLHP RYRTQPC+DGT CRRRVCFFAHT +QLR+ P +Q
Sbjct: 125 FRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQ 184

Query: 179 SVRSPRA---------------REIAVPAV-------SSPTSILL----SPSSDSPPLSP 238
           S  SPR+               R  A  +        SSPTS L+    SP S+SPPLSP
Sbjct: 185 S--SPRSVASSPLAESYDGSPLRRQAFESYLTKTIMSSSPTSTLMSPPKSPPSESPPLSP 244

Query: 239 --ISPVISG-----GESFSRLVALMHSLRLDELKTNPG---------------------- 294
              + +  G     G   + ++A    LRL+++K++P                       
Sbjct: 245 DGAAAIRRGSWPGVGSPVNDVLASFRQLRLNKVKSSPSGGWSYPSSSAVYGSPKAATGLY 304

[Close]

BLAST of Cmc03g0085381 vs. ExPASy Swiss-Prot
Match: Q6L4N4 (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0195200 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.7e-57
Identity = 137/322 (42.55%), Postives = 169/322 (52.48%), Query Frame = 0


Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           A VD ++CD+FRMYEFKVR CARGRSHDWT+CP+AH GEKARRRDPR++ YSG  CPD R
Sbjct: 68  AAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFR 127

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRI---PGKQ 180
            G CK+GDACE+AHG FE WLHP RYRTQPC+DGT CRRRVCFFAHT +QLR+     +Q
Sbjct: 128 KGGCKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPPSQQQ 187

Query: 181 SVRSPR------AREIAVPAV-----------------------SSPTSILL----SPSS 240
              SPR      A   A P                         SSPTS L+    SP S
Sbjct: 188 GSNSPRGCGGGGAGAAASPLAESYDGSPLRRQAFESYLTKSIMSSSPTSTLVSPPRSPPS 247

Query: 241 DSPPLSPIS-------PVISGGESFSRLVALMHSLRLDELKTNPGVSSF--------SPN 300
           +SPPLSP +            G   + +   +  LRL   ++ P  +SF        SP 
Sbjct: 248 ESPPLSPDAAGALRRGAWAGVGSPVNDVHVSLRQLRLGSPRSAPSCASFLPAGYQYGSPK 307

Query: 301 LRRNSGAFDLWDREN----------------------------EEEPAMERVESGRNLRA 304
               + A  L+   +                            EEE  MERVESGR LR 
Sbjct: 308 SPAAAAAAALYSLPSTPTRLSPVTVTTASGATVTVEPLDLGLIEEEQPMERVESGRALRE 367

[Close]

BLAST of Cmc03g0085381 vs. ExPASy TrEMBL
Match: A0A5A7V5C0 (Zinc finger CCCH domain-containing protein 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001160 PE=4 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 6.0e-177
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300
           PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI
Sbjct: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300

Query: 301 SAGSQN 307
           SAGSQN
Sbjct: 301 SAGSQN 306

[Close]

BLAST of Cmc03g0085381 vs. ExPASy TrEMBL
Match: A0A1S3BBA7 (LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 OS=Cucumis melo OX=3656 GN=LOC103487803 PE=4 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 1.9e-175
Identity = 304/306 (99.35%), Postives = 304/306 (99.35%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGES SRLVALMHSLRLDE KTN
Sbjct: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESSSRLVALMHSLRLDEXKTN 240

Query: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300
           PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI
Sbjct: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300

Query: 301 SAGSQN 307
           SAGSQN
Sbjct: 301 SAGSQN 306

[Close]

BLAST of Cmc03g0085381 vs. ExPASy TrEMBL
Match: A0A0A0LNN8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352420 PE=4 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 2.4e-170
Identity = 295/307 (96.09%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRARE+A+PAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRNSG-AFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPL 300
           PGVSSFSPNLRR+SG AFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRP+
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ISAGSQN 307
           ISAGS N
Sbjct: 301 ISAGSLN 307

[Close]

BLAST of Cmc03g0085381 vs. ExPASy TrEMBL
Match: Q5NDD3 (Putative CCCH-type zinc finger protein CsSEF1 OS=Cucumis sativus OX=3659 GN=se2c5 PE=2 SV=1)

HSP 1 Score: 602.8 bits (1553), Expect = 7.8e-169
Identity = 293/307 (95.44%), Postives = 299/307 (97.39%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MIAESMLLNPT+HISTWDSLDDPS AISSYFS  HVSPLDSPTAALMDFDSSLWEDPDLP
Sbjct: 1   MIAESMLLNPTSHISTWDSLDDPSPAISSYFSTAHVSPLDSPTAALMDFDSSLWEDPDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           APVD +SCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR
Sbjct: 61  APVDAYSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR
Sbjct: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180

Query: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPRARE+A+PAVSSPTSILLSPSSDSPPLSPISPVISGGES SRLVALMHSLRLDELKTN
Sbjct: 181 SPRAREMAIPAVSSPTSILLSPSSDSPPLSPISPVISGGESLSRLVALMHSLRLDELKTN 240

Query: 241 PGVSSFSPNLRRNSG-AFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPL 300
           PGVSSFSPNLRR+SG AFDLWDR NEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRP+
Sbjct: 241 PGVSSFSPNLRRSSGAAFDLWDRGNEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPM 300

Query: 301 ISAGSQN 307
           ISAGS N
Sbjct: 301 ISAGSLN 307

[Close]

BLAST of Cmc03g0085381 vs. ExPASy TrEMBL
Match: A0A6J1K790 (zinc finger CCCH domain-containing protein 20-like OS=Cucurbita maxima OX=3661 GN=LOC111492294 PE=4 SV=1)

HSP 1 Score: 549.7 bits (1415), Expect = 7.9e-153
Identity = 259/306 (84.64%), Postives = 280/306 (91.50%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDLP 60
           MI ESM LNPT HIS+WDSLDDP+AAI SYF+AG+VSPLDSPTAA+MD+DSS WED DLP
Sbjct: 1   MINESMFLNPTPHISSWDSLDDPAAAIPSYFTAGNVSPLDSPTAAVMDYDSSFWEDQDLP 60

Query: 61  APVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLR 120
           A VD F+CD FRMYEFKVR+CARGRSHDWTKCPYAH GEKARRRDPRKFNYSG ECPDLR
Sbjct: 61  AIVDAFTCDHFRMYEFKVRACARGRSHDWTKCPYAHAGEKARRRDPRKFNYSGTECPDLR 120

Query: 121 HGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLRIPGKQSVR 180
           HGCC KGDACEYAHG FEIWLHPDRYRTQPCRDG  CRRRVCFFAH+SEQLRIPGKQS+R
Sbjct: 121 HGCCMKGDACEYAHGVFEIWLHPDRYRTQPCRDGAVCRRRVCFFAHSSEQLRIPGKQSIR 180

Query: 181 SPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSRLVALMHSLRLDELKTN 240
           SPR REIA PAVSSPTSIL+S SSDSPP+SPISP+ +GGESFSRLVALMH+L  DELKTN
Sbjct: 181 SPRGREIAAPAVSSPTSILISSSSDSPPMSPISPLATGGESFSRLVALMHNLHFDELKTN 240

Query: 241 PGVSSFSPNLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLI 300
           PG+S F P+ RRNSGAFD WDR+NEEEPAMERVESGRNLRAQMYAKLMR+NSV+RVRPLI
Sbjct: 241 PGISGFGPSFRRNSGAFDSWDRDNEEEPAMERVESGRNLRAQMYAKLMRDNSVERVRPLI 300

Query: 301 SAGSQN 307
            AGS+N
Sbjct: 301 LAGSRN 306

[Close]

BLAST of Cmc03g0085381 vs. TAIR 10
Match: AT2G19810.1 (CCCH-type zinc finger family protein )

HSP 1 Score: 277.3 bits (708), Expect = 1.5e-74
Identity = 153/340 (45.00%), Postives = 197/340 (57.94%), Query Frame = 0


Query: 1   MIAESML-LNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWEDPDL 60
           MI ES    NPT HI  W   +D + +   Y S    S +    A L  +  S   DPD 
Sbjct: 2   MIGESHRGFNPTVHIPPWPLSEDLTVS-DIYGSPDGGSSMMEALAELQRYLPSNEPDPDS 61

Query: 61  -------PAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFNYS 120
                   +P+D ++CD FRMYEFKVR CARGRSHDWT+CPYAH GEKARRRDPRKF+YS
Sbjct: 62  DPDLSGPDSPIDAYTCDHFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYS 121

Query: 121 GAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQLR 180
           G  CP+ R GCCK+GDACE++HG FE WLHP RYRTQPC+DG  CRRRVCFFAH+ +Q+R
Sbjct: 122 GTACPEFRKGCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIR 181

Query: 181 IPGKQSVRSPRAREIAVPAVSSPTSILLSPSSDSPPLSPISPVISGGESFSR-------- 240
           +   QS     + ++  P +       +SPSS+SPP+SP     S     SR        
Sbjct: 182 VLPNQSPDRVDSFDVLSPTIRRAFQFSISPSSNSPPVSPRGDSDSSCSLLSRSLGSNLGN 241

Query: 241 -LVALMHSLRLDELKTN-------------------------PGVSSFSPNLRRNSGAFD 299
            +VA + +L+L+++K++                         PG  S  P      G  +
Sbjct: 242 DVVASLRNLQLNKVKSSLSSSYNNQIGGYGSGFGSPRGSVLGPGFRSL-PTTPTRPGFMN 301

[Close]

BLAST of Cmc03g0085381 vs. TAIR 10
Match: AT2G25900.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 265.0 bits (676), Expect = 7.5e-71
Identity = 157/318 (49.37%), Postives = 201/318 (63.21%), Query Frame = 0


Query: 9   NPTAHISTWDSLDDPSAAISSYFSAGHVSPLD----SPTAALMDFDS--------SLWED 68
           +PT HI  WD ++DP+A ISS FS+ +++ ++    SP+  L  F S         L  D
Sbjct: 11  HPTIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTND 70

Query: 69  PDLPAP------VDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 128
            D  +        D FS D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+
Sbjct: 71  SDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFH 130

Query: 129 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQ 188
           YSG  CP+ R G C++GD+CE++HG FE WLHP RYRTQPC+DGT CRRR+CFFAHT+EQ
Sbjct: 131 YSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQ 190

Query: 189 LRIPGKQSVRSPRAREIAVPAVSSPTSILLSPS----SDSPPLSPISPVISGGESFSRLV 248
           LR+        P     +  A +SPTSIL+SPS    S+SPPLSP         S   L+
Sbjct: 191 LRV--LPCSLDPDLGFFSGLA-TSPTSILVSPSFSPPSESPPLSP---------STGELI 250

Query: 249 ALMHSLRLDE---LKTNPGVSS----FSPNLRRNSGAFDLWDR----ENEEEPAMERVES 294
           A M  ++L+      ++P  S+    FS +LR    A   W R    E EE PAME VES
Sbjct: 251 ASMRKMQLNGGGCSWSSPMRSAVRLPFSSSLRPIQAA--TWPRIREFEIEEAPAMEFVES 310

[Close]

BLAST of Cmc03g0085381 vs. TAIR 10
Match: AT2G25900.2 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 265.0 bits (676), Expect = 7.5e-71
Identity = 157/318 (49.37%), Postives = 201/318 (63.21%), Query Frame = 0


Query: 9   NPTAHISTWDSLDDPSAAISSYFSAGHVSPLD----SPTAALMDFDS--------SLWED 68
           +PT HI  WD ++DP+A ISS FS+ +++ ++    SP+  L  F S         L  D
Sbjct: 11  HPTIHIPQWDQINDPTATISSPFSSVNLNSVNDYPHSPSPYLDSFASLFRYLPSNELTND 70

Query: 69  PDLPAP------VDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 128
            D  +        D FS D+FR+YEFK+R CARGRSHDWT+CP+AH GEKARRRDPRKF+
Sbjct: 71  SDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFH 130

Query: 129 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQ 188
           YSG  CP+ R G C++GD+CE++HG FE WLHP RYRTQPC+DGT CRRR+CFFAHT+EQ
Sbjct: 131 YSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQ 190

Query: 189 LRIPGKQSVRSPRAREIAVPAVSSPTSILLSPS----SDSPPLSPISPVISGGESFSRLV 248
           LR+        P     +  A +SPTSIL+SPS    S+SPPLSP         S   L+
Sbjct: 191 LRV--LPCSLDPDLGFFSGLA-TSPTSILVSPSFSPPSESPPLSP---------STGELI 250

Query: 249 ALMHSLRLDE---LKTNPGVSS----FSPNLRRNSGAFDLWDR----ENEEEPAMERVES 294
           A M  ++L+      ++P  S+    FS +LR    A   W R    E EE PAME VES
Sbjct: 251 ASMRKMQLNGGGCSWSSPMRSAVRLPFSSSLRPIQAA--TWPRIREFEIEEAPAMEFVES 310

[Close]

BLAST of Cmc03g0085381 vs. TAIR 10
Match: AT4G29190.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 253.1 bits (645), Expect = 2.9e-67
Identity = 148/336 (44.05%), Postives = 189/336 (56.25%), Query Frame = 0


Query: 1   MIAESMLLNPTAHISTWDSLDDPSAAISSYFSAGHVSPLDSPTAALMDFDSSLWED---- 60
           MI E+    PT  I  W  L++     S +FS    SP  S   AL      L  +    
Sbjct: 2   MIGETRRTYPTVEIPPWPVLEE--LTTSEFFSPVMNSPDCSMLEALAGLQRYLPSNEPDP 61

Query: 61  ---PDL---PAPVDGFSCDQFRMYEFKVRSCARGRSHDWTKCPYAHTGEKARRRDPRKFN 120
              PDL    +P+D +SCD FRMY+FKVR CARGRSHDWT+CPYAH GEKARRRDPRK++
Sbjct: 62  ESYPDLLGPDSPIDAYSCDHFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYH 121

Query: 121 YSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGTGCRRRVCFFAHTSEQ 180
           YSG  CPD R G CKKGD+CE+AHG FE WLHP RYRTQPC+DG  C R++CFFAH+ +Q
Sbjct: 122 YSGTACPDFRKGGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQ 181

Query: 181 LRIPGKQSVRSPRAREIAVPAVSSPTSILLSPSSDSPPLSP-----ISPVIS------GG 240
           LR    +S     + +++ P  +    + +SP S SPP+SP      SP+        G 
Sbjct: 182 LRFLHTRSPDRVDSFDVSSPIRARAFQLSISPVSGSPPMSPRADSESSPMTQSLSRSLGS 241

Query: 241 ESFSRLVALMHSLRLDELKT------------------NPGVSSFSPNLRRNSGAFDLWD 297
            S + +V    +L+ + +K+                   PG  S  P      G  D+W+
Sbjct: 242 CSINDVVPSFRNLQFNSVKSFPRNNPLFGFGSPRGSILGPGFQSL-PTTPTRPGNLDIWE 301

[Close]

BLAST of Cmc03g0085381 vs. TAIR 10
Match: AT2G41900.1 (CCCH-type zinc finger protein with ARM repeat domain )

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-48
Identity = 108/233 (46.35%), Postives = 137/233 (58.80%), Query Frame = 0


Query: 33  AGHVSPLDSP-TAALMDFDSSLWEDPDLPAPVDG-FSCDQFRMYEFKVRSCARGRSHDWT 92
           +G  SPL SP      +F      DP LP   +  ++ D+FRMY FKVR C+R  SHDWT
Sbjct: 222 SGSGSPLGSPFKLKSTEFKKEYPVDPSLPDIKNSIYATDEFRMYSFKVRPCSRAYSHDWT 281

Query: 93  KCPYAHTGEKARRRDPRKFNYSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQP 152
           +CP+ H GE ARRRDPRKF+YS   CPD R G C++GD CEYAHG FE WLHP +YRT+ 
Sbjct: 282 ECPFVHPGENARRRDPRKFHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRL 341

Query: 153 CRDGTGCRRRVCFFAHTSEQLR---IPGKQSVRSPRAREIAVPAVSSPTSILLSPSSDSP 212
           C+DGTGC RRVCFFAHT E+LR        +V SPR+      A+    S+L    S   
Sbjct: 342 CKDGTGCARRVCFFAHTPEELRPLYASTGSAVPSPRSNADYAAAL----SLLPGSPSGVS 401

Query: 213 PLSPISPVISG-GESFSRLVALMHSLRLDELKTNPGVSSFSPNLRRNSGAFDL 260
            +SP+SP  +G G S S +     ++    L   PG +  S  LR +  A D+
Sbjct: 402 VMSPLSPSAAGNGMSHSNMAWPQPNVPALHL---PGSNLQSSRLRSSLNARDI 447

The following BLAST results are available for this feature:

BLAST of Cmc03g0085381 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060981.1	1.2e-176	100.00	zinc finger CCCH domain-containing protein 20 [Cucumis melo var. makuwa]	[more]
XP_008444505.1	4.0e-175	99.35	PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 [C...	[more]
KGN62412.1	5.0e-170	96.09	hypothetical protein Csa_018765 [Cucumis sativus]	[more]
NP_001295793.1	1.6e-168	95.44	zinc finger CCCH domain-containing protein 20 [Cucumis sativus] >CAI30889.1 puta...	[more]
KAG7029281.1	1.9e-153	85.29	Zinc finger CCCH domain-containing protein 49, partial [Cucurbita argyrosperma s...	[more]

BLAST of Cmc03g0085381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82199	2.0e-73	45.00	Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN...	[more]
O82307	1.0e-69	49.37	Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9M0G2	4.1e-66	44.05	Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FU27	2.6e-60	45.75	Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=...	[more]
Q6L4N4	2.7e-57	42.55	Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Cmc03g0085381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V5C0	6.0e-177	100.00	Zinc finger CCCH domain-containing protein 20 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BBA7	1.9e-175	99.35	LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 20 OS=Cucumis me...	[more]
A0A0A0LNN8	2.4e-170	96.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352420 PE=4 SV=1	[more]
Q5NDD3	7.8e-169	95.44	Putative CCCH-type zinc finger protein CsSEF1 OS=Cucumis sativus OX=3659 GN=se2c...	[more]
A0A6J1K790	7.9e-153	84.64	zinc finger CCCH domain-containing protein 20-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Cmc03g0085381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19810.1	1.5e-74	45.00	CCCH-type zinc finger family protein	[more]
AT2G25900.1	7.5e-71	49.37	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25900.2	7.5e-71	49.37	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT4G29190.1	2.9e-67	44.05	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G41900.1	1.8e-48	46.35	CCCH-type zinc finger protein with ARM repeat domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 145..168 e-value: 46.0 score: 3.0 coord: 110..136 e-value: 0.035 score: 23.3
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 110..137 score: 12.117198
None	No IPR available	GENE3D	4.10.1000.10		coord: 105..178 e-value: 8.7E-7 score: 30.7
None	No IPR available	PANTHER	PTHR14493:SF116	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20	coord: 7..242
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 7..242
None	No IPR available	PANTHER	PTHR14493:SF116	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20	coord: 251..303
None	No IPR available	PANTHER	PTHR14493	UNKEMPT FAMILY MEMBER	coord: 251..303

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0085381.1	Cmc03g0085381.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061157	mRNA destabilization
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003727	single-stranded RNA binding