Cmc03g0062581 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc03g0062581
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr03: 2837945 .. 2839378 (+)
RNA-Seq Expression	Cmc03g0062581
Synteny	Cmc03g0062581

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCTTCCTCCAAGGTTCTCTAACACTAATATATATTAACAGAATATTTGTAATCACAATCCCAAGCCTGTAACCGTGCAATATAGTTGATCTTTCGAGTTTGTTTCAGTGGCTGCATTGCAGAATGAAGAGAGCCCGATGAAGATTTTCGACAATCTTTTGATGCTACTTTTCAAATATAGTTTTCTTTTTCATAATTATGAGGGTATTTTGAAGTGAAATAACCATGATATGACAAAGGCGAAAACCATGCAGGCGAGTAAGAAATTCAGGAACCTGTGGCCTTGCCAGAAGTTCCGAGCCTCTGTAGAGTGTGGTGGCATCACTATGGCAGCTGTAGCAGTTGCTGTTGTTGCTTCGTTTGGTTCATTGCGTTGCTCTGTTGAATCGGCTTCGTAAGTACCAGTAACATTGTGTGCAATTGATCCACAGATCTCACATGTGCTGTAACAAATTACACATGGGTCAGTGCAAGGTACATGTTGAGCTTTTCCAAGTTTGAACAGTATTTGCTTTTCCCCCCGTCTTTTATTCCAGATAACATAACTTTTCAAATTACTTCAAACACCAAAGTCAGCTAAAAGAACAACATGAATCACAATCAAGTTTTATAGAACGCTCTCTAATAGTGAAAAGTTTTCCTGGCCAAACTATATATGTTTGCTAGCAGGGTCAAACGCAATAAAGTTCTTCACAGACCGACTATTACAATTCAATTCTTTCAATACGCTCATAGATTCATCATGGGAAAAATATGTTCAACCTATGCAGAAGATATAGTGAAGATAGTTTTTTGGCTTCTTACAGTCTACAGACCCTTTGACCGTCATCTGTATGTAATAAGCTTTAATCAATCAACAAATTTGACAATGAAAAGAGGTTTCAGATAGCGATGCTTAATTCAGGTTACAGTATAATGAATGAGGAAATAACCATGTTCAAATATTGTATCTCTTATCTATAAATTTAAATGTGTTTCCTAGGTTCTATGGGAGATGAATGTTTGATACCGTGAAGTATTCGACAGACAAAATAGCTTCACAGTCTTGAATGGTGATTTGAGAGTGGTGAAATGAAATAACAATCAACCTCAGACTGAAGCTCTAACTTTGTCCATACAAGTTTAAATACATTCTGAACAAAGGATGATACGAATATTGATAGCTATGCCGATCACGGAACTTGTGAAAATGTAAATATAGGTTAAACCTCAAAGAAAGATGTTCGAAACTCAAAACAAAACCAATCTATATTGTATCATAAATAATATATGTACTAATCTTCGCAACATCTTCTGTAGGACAGTGTGAACTGATAAAGAAATGGTTAACAAGGAAAAAAGAATCTCACTGATTGGTCTTTTTAGGAATAAATGTTGATTCCATATATTTTTGTAGATACCAACATCATGTAATGAAGTAATAAAGAATATGTA

mRNA sequence

CTCTTCCTCCAAGGTTCTCTAACACTAATATATATTAACAGAATATTTGTAATCACAATCCCAAGCCTGTAACCGTGCAATATAGTTGATCTTTCGAGTTTGTTTCAGTGGCTGCATTGCAGAATGAAGAGAGCCCGATGAAGATTTTCGACAATCTTTTGATGCTACTTTTCAAATATAGTTTTCTTTTTCATAATTATGAGGGTATTTTGAAGTGAAATAACCATGATATGACAAAGGCGAAAACCATGCAGGCGAGTAAGAAATTCAGGAACCTGTGGCCTTGCCAGAAGTTCCGAGCCTCTGTAGAGTGTGGTGGCATCACTATGGCAGCTGTAGCAGTTGCTGTTGTTGCTTCGTTTGGTTCATTGCGTTGCTCTGTTGAATCGGCTTCGTAAGTACCAGTAACATTGTGTGCAATTGATCCACAGATCTCACATGTGCTGTAACAAATTACACATGGGTCAGTGCAAGGTTCTATGGGAGATGAATGTTTGATACCGTGAAGTATTCGACAGACAAAATAGCTTCACAGTCTTGAATGGTGATTTGAGAGTGGTGAAATGAAATAACAATCAACCTCAGACTGAAGCTCTAACTTTGTCCATACAAGTTTAAATACATTCTGAACAAAGGATGATACGAATATTGATAGCTATGCCGATCACGGAACTTGTGAAAATGTAAATATAGGTTAAACCTCAAAGAAAGATGTTCGAAACTCAAAACAAAACCAATCTATATTGTATCATAAATAATATATGTACTAATCTTCGCAACATCTTCTGTAGGACAGTGTGAACTGATAAAGAAATGGTTAACAAGGAAAAAAGAATCTCACTGATTGGTCTTTTTAGGAATAAATGTTGATTCCATATATTTTTGTAGATACCAACATCATGTAATGAAGTAATAAAGAATATGTA

Coding sequence (CDS)

ATGACAAAGGCGAAAACCATGCAGGCGAGTAAGAAATTCAGGAACCTGTGGCCTTGCCAGAAGTTCCGAGCCTCTGTAGAGTGTGGTGGCATCACTATGGCAGCTGTAGCAGTTGCTGTTGTTGCTTCGTTTGGTTCATTGCGTTGCTCTGTTGAATCGGCTTCGTAA

Protein sequence

MTKAKTMQASKKFRNLWPCQKFRASVECGGITMAAVAVAVVASFGSLRCSVESAS

Homology

[Close]

BLAST of Cmc03g0062581 vs. NCBI nr
Match: EEF31971.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 55.5 bits (132), Expect = 1.7e-04
Identity = 32/55 (58.18%), Postives = 33/55 (60.00%), Query Frame = 0


Query: 1  MTKAKTMQASKKFRNLWPCQKFRASVECGGITMAAVAVAVVASFGSLRCSVESAS 56
          MTKAKT+ ASKKFRN WPCQK R S  C   T    AVA  AS  S  CS  S S
Sbjct: 35 MTKAKTIHASKKFRNRWPCQKCRVSAVCTDGT----AVATAASLASFHCSTNSTS 85

[Close]

BLAST of Cmc03g0062581 vs. ExPASy TrEMBL
Match: B9SWN2 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0498030 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 8.4e-05
Identity = 32/55 (58.18%), Postives = 33/55 (60.00%), Query Frame = 0


Query: 1  MTKAKTMQASKKFRNLWPCQKFRASVECGGITMAAVAVAVVASFGSLRCSVESAS 56
          MTKAKT+ ASKKFRN WPCQK R S  C   T    AVA  AS  S  CS  S S
Sbjct: 35 MTKAKTIHASKKFRNRWPCQKCRVSAVCTDGT----AVATAASLASFHCSTNSTS 85

The following BLAST results are available for this feature:

BLAST of Cmc03g0062581 vs. NCBI nr


Match Name	E-value	Identity	Description
EEF31971.1	1.7e-04	58.18	conserved hypothetical protein [Ricinus communis]	[more]

BLAST of Cmc03g0062581 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc03g0062581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B9SWN2	8.4e-05	58.18	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0498030 PE=4 SV=1	[more]

BLAST of Cmc03g0062581 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc03g0062581.1	Cmc03g0062581.1	mRNA