Cmc02g0059211 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTACTCAAAGAAAAAAGAGAAAAGAAAAAAGAAAAAAAAAAGAGAAGAGAAAAAGAAAGAAAGAAAGAAAAAAAAAAGGAAAACCAATCTCCCTTTTTATTTGTATCTTCAGAAATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCATCCCACATGTCATCCCGTCCATCCGACTCCTCGTTACGGTTCCGTTCCGATCCATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGAGTGCTTGTTCAAGTACGAGGAGGTGATGAAGCCGGAGGCAGCGAGCTGTGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAAAAAGCTGAAAGAATGAAAGAAAGAGCAACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAGTCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATTATCTTTAATCATAATTTTACCTCATTAATTACCCCTTTCCATTTCCCTTAATTATCCAGAGTTCCTTTTAATTAAATCTCTGCTTGGGTCTGTTTTCTTTTTTTCTTTTTAATTAATCATTTAAATTAAGTAAACTAAAGAAAAAAAAAAATATATATATATATATGGGGTTCTTAATTAGTTGGATCATTACCATCTTTGATCATCAACAATTACACATTAAATAATTCAAAATTGGAGTTCAAATTCAATTTTGTTTTGGAAATTTGTTTTGGTCTCCTAGTAATTTAATTTCTTGGTTGTTTAGTGAATTAAGTTTGTATGATATTTTAATATATTATTGATAAT TTGTACTCAAAGAAAAAAGAGAAAAGAAAAAAGAAAAAAAAAAGAGAAGAGAAAAAGAAAGAAAGAAAGAAAAAAAAAAGGAAAACCAATCTCCCTTTTTATTTGTATCTTCAGAAATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCATCCCACATGTCATCCCGTCCATCCGACTCCTCGTTACGGTTCCGTTCCGATCCATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGAGTGCTTGTTCAAGTACGAGGAGGTGATGAAGCCGGAGGCAGCGAGCTGTGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAAAAAGCTGAAAGAATGAAAGAAAGAGCAACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAGTCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATTATCTTTAATCATAATTTTACCTCATTAATTACCCCTTTCCATTTCCCTTAATTATCCAGAGTTCCTTTTAATTAAATCTCTGCTTGGGTCTGTTTTCTTTTTTTCTTTTTAATTAATCATTTAAATTAAGTAAACTAAAGAAAAAAAAAAATATATATATATATATGGGGTTCTTAATTAGTTGGATCATTACCATCTTTGATCATCAACAATTACACATTAAATAATTCAAAATTGGAGTTCAAATTCAATTTTGTTTTGGAAATTTGTTTTGGTCTCCTAGTAATTTAATTTCTTGGTTGTTTAGTGAATTAAGTTTGTATGATATTTTAATATATTATTGATAAT ATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCATCCCACATGTCATCCCGTCCATCCGACTCCTCGTTACGGTTCCGTTCCGATCCATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTAAGGCCAATCCGGCCAGTAACGGCAGGGGGGGAGTGCTTGTTCAAGTACGAGGAGGTGATGAAGCCGGAGGCAGCGAGCTGTGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAAAAAGCTGAAAGAATGAAAGAAAGAGCAACTCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAGTCTTGCAGGCAGAGGTTTCGGCCTTCTTAA MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGGECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS Homology
BLAST of Cmc02g0059211 vs. NCBI nr
Match: XP_008464429.1 (PREDICTED: protein indeterminate-domain 16 [Cucumis melo] >TYJ98452.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]) HSP 1 Score: 322.0 bits (824), Expect = 3.1e-84 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cmc02g0059211 vs. NCBI nr
Match: KAA0057771.1 (protein indeterminate-domain 16 [Cucumis melo var. makuwa]) HSP 1 Score: 320.5 bits (820), Expect = 9.0e-84 Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cmc02g0059211 vs. NCBI nr
Match: XP_004138047.1 (protein indeterminate-domain 16 [Cucumis sativus]) HSP 1 Score: 300.8 bits (769), Expect = 7.4e-78 Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 0
BLAST of Cmc02g0059211 vs. NCBI nr
Match: XP_038878928.1 (protein indeterminate-domain 16 [Benincasa hispida]) HSP 1 Score: 297.0 bits (759), Expect = 1.1e-76 Identity = 162/171 (94.74%), Postives = 162/171 (94.74%), Query Frame = 0
BLAST of Cmc02g0059211 vs. NCBI nr
Match: KAE8652381.1 (hypothetical protein Csa_014379 [Cucumis sativus]) HSP 1 Score: 290.4 bits (742), Expect = 9.9e-75 Identity = 164/170 (96.47%), Postives = 166/170 (97.65%), Query Frame = 0
BLAST of Cmc02g0059211 vs. ExPASy Swiss-Prot
Match: F4IPE3 (Zinc finger protein SHOOT GRAVITROPISM 5 OS=Arabidopsis thaliana OX=3702 GN=SGR5 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.3e-08 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Cmc02g0059211 vs. ExPASy Swiss-Prot
Match: Q9FRH4 (Protein indeterminate-domain 16 OS=Arabidopsis thaliana OX=3702 GN=IDD16 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 9.2e-07 Identity = 47/144 (32.64%), Postives = 74/144 (51.39%), Query Frame = 0
BLAST of Cmc02g0059211 vs. ExPASy Swiss-Prot
Match: Q9C9X7 (Protein indeterminate-domain 14 OS=Arabidopsis thaliana OX=3702 GN=IDD14 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.6e-06 Identity = 28/63 (44.44%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Cmc02g0059211 vs. ExPASy TrEMBL
Match: A0A5D3BFD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00530 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cmc02g0059211 vs. ExPASy TrEMBL
Match: A0A1S3CN02 (protein indeterminate-domain 16 OS=Cucumis melo OX=3656 GN=LOC103502321 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cmc02g0059211 vs. ExPASy TrEMBL
Match: A0A5A7UWD1 (Protein indeterminate-domain 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00540 PE=4 SV=1) HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84 Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cmc02g0059211 vs. ExPASy TrEMBL
Match: A0A0A0LRS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001530 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.6e-78 Identity = 169/175 (96.57%), Postives = 171/175 (97.71%), Query Frame = 0
BLAST of Cmc02g0059211 vs. ExPASy TrEMBL
Match: A0A6J1E4S8 (protein indeterminate-domain 16-like OS=Cucurbita moschata OX=3662 GN=LOC111429927 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.4e-71 Identity = 155/173 (89.60%), Postives = 161/173 (93.06%), Query Frame = 0
BLAST of Cmc02g0059211 vs. TAIR 10
Match: AT3G48550.1 (BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3); Has 78 Blast hits to 78 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 137.1 bits (344), Expect = 1.3e-32 Identity = 91/171 (53.22%), Postives = 117/171 (68.42%), Query Frame = 0
BLAST of Cmc02g0059211 vs. TAIR 10
Match: AT2G01940.1 (C2H2-like zinc finger protein ) HSP 1 Score: 61.2 bits (147), Expect = 9.1e-10 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Cmc02g0059211 vs. TAIR 10
Match: AT2G01940.2 (C2H2-like zinc finger protein ) HSP 1 Score: 61.2 bits (147), Expect = 9.1e-10 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Cmc02g0059211 vs. TAIR 10
Match: AT2G01940.3 (C2H2-like zinc finger protein ) HSP 1 Score: 61.2 bits (147), Expect = 9.1e-10 Identity = 33/79 (41.77%), Postives = 61/79 (77.22%), Query Frame = 0
BLAST of Cmc02g0059211 vs. TAIR 10
Match: AT1G25250.1 (indeterminate(ID)-domain 16 ) HSP 1 Score: 55.1 bits (131), Expect = 6.6e-08 Identity = 47/144 (32.64%), Postives = 74/144 (51.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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