Cmc02g0058741 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc02g0058741
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	28 kDa ribonucleoprotein, chloroplastic-like
Location	CMiso1.1chr02: 24124284 .. 24127443 (+)
RNA-Seq Expression	Cmc02g0058741
Synteny	Cmc02g0058741

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAACGGCCATCTCTTTCTTCACTGCTCCTTATCCTCAATTCCTCACCCCTCACCTCTTTGGGTGTTAAGCCTTGTCCTCTAAAACCCTTCTTCTTCTTCCTCTTCTATCCCTTCCTTTCGATTCAGTAATGGCTTCTACTTCAGCCACTTCCCTTTTCAAGCCTTTATCCAAGCCGGATTCTTGCTTTCTCTCTTTACCTTCTCTATTCACTGGCAGACCCCCACATACTTTCCTCTCTTTCCCTTCAAAATTCATCCCCTTCCATCTTTCCTCGTCGTCTTCCCATTCTTCATGCTTTTACCCTTCAAAGAAGAAACCCCATCTTCCCTCTGTGGCTCAAACTTCCGACTGGGCTCAAGAAGATGACACTATGACCATTGACCCAAAACTCGACAACGACGAAGATGCGGAAGAAGAAGGCGGCCCCCATTGGGAAAATGAAGAGCTCAGTGAAACTGAGTCTCGTATTTCTGATTGGGAAGGTGAAGGCGAAGATGGAGGAAGTGAGGCTGAAGTAGGAGGAGATGAAGAAGAAGAAGAAGAAGGGGAACAAGGGCCTTATGAAGAGCCAAACGAAGATGCTAAACTGTTTGTTGGGAATTTGCCTTATGATATTGACAGTGAAAAGTTAGCAATGCTCTTTGAGAAGGCTGGAACTGTGGAGATTGCTGAGGTGAGCTTTAGTTATACTGTTGCTGTCTGTTTCGTTTATGGATTTGGTTTAATCTTTTAATCTTCTTGTGATTGTGAGGAGTGCAGGTTATTTACAACAGAGAAACAGATAGGAGTCGCGGTTTTGGGTTTGTGACAATGAGTACAGTTGAAGAAGCTGAGAAAGCTGTGGATACCTTCAACCGTTATGTAAGCTTTTCTAGATATGACTCAGCCACATTTGTGTATCATGAATGAAACCTTATCTTCATTTTTACTTCACAATGGAAGCATTTACTGCCATACTTATCTTTGCATTTAACCATTTCATTTTACTCTGAAGAGTTTAAATGAACTGGTTTTCATGAATCTGAGGACTTGTTAGTGTAGGACATAACAATCAGGATGACAGATGAGTTTGTTGATTCTTCAAATGTTTAATTTTGAAAATAAGTTATTTTTTAGTCTTTGGGTACCACTCAAAAGAGCTCCCAAAGTTTATTTTCCCTAGTCAATCCTTACATATCCATAGCCGTAATGATTCGTTTGTTTGAATGTTTGACGATGAGACTGATTTTGCTATGAGGATAAGCTAAGGTTCCCCAAGAGGCCTTGATGTAATTGTTGGTTTTCTTTGATTGAGATACCCTTGACTTTTACTTGGTACTCTGTTTAAACTTTTCCATTCTCAGTTCTACAGAAGAATTTATGGGGATAAATTGTATTTTTCTGGGTTTATAGGAGTTATCAGGGAGGCTATTGACTGTTAATAAGGCTGCTCCAAGAGGTACAAGGCAAGAACGCCAACCTCGACCATTCCAACCTGCTTTCAGAATCTATGTGGGCAATCTTCCATGGGATGTAGACAATGCACGCTTGGAGCAGGTCTTTAGTGAACATGGTAAAGTAGTAGATGCTCGGGTTCTTTACGACCGGGACAGTGGCCGTTCTCGTGGCTTTGGCTTTGTGACCATGGCTGATGAAACTGGAATGAATGATGCCATTGCTGCTCTGGATGGACAGGTATGAAAACTGAAGTTTCCTTAATGACCTCATTGTCGAATTTAAATTGGTTCAACGCCTTTATGATTAAATGATGAAGCTTTCATGTCTCCACGAGTAAAAAAAAAAATTTACCAACTGCTTACAAAACATTTTGAAATTTGAAATGTGCAGAGTCTAGAAGGAAGGGCAATCAGAGTAAATGTTGCTGAGGAAAGACCAAGGCGCAACTTCTGAGCCGAACCATGATGAATCCAAAAGGCCTTTTCTTCTTTTCTTGTTCTATGTTCCTTTTATTCCTTTTTTGTTTTCCCAGAAAGTATAGGTGAGTTTTGTAGTGCCATTGTTTAGCCACCTTATTACAGTGTAATTTGATGTCTTTTATGCTTCCTAAAATTTCAAGTCCTCTATTATTTTGGATAATGTACGAGTTACAAGTTTCGTGCCATGCCCTCCTTTAGTCCTTTTGATTTATGAGCTAGAATTGTGTCAATGTTTTGATATGAATGGAGCAAATTGATTGAAAGCAAAGGATATAAAATCCTTATTTGTACTAAATACCGACGTTGAGGAAGAATATACAGTGCGGATGTTCGAAGCAAGAGGCAAACAGTGTCTAAAAGTTTCTATACACAGCATTTTGATAATAGAGGCAGAGCATCAGAAAGTATTGCCTAAGGCAAGATCAATTGTCACGTAACTGAGCTTCTCGACTTGTAAGAGGCACGTAACGAACGGAAGTCTCGTCGTGGATGCTAACAGAGCCATCACTATCTTTGTCTACAACCTTCAAATCCTGGAATATGTTCCCAACAGGAATCACCATTCTCCCGCCAGGCTTCAACTGATCAATGAGAGCTGGCGGAATTTCAGCAGCTGCTGCTCCAACATGGATAGCGTCGTATGGTGCACACTCGGCCCAACCCTGCCTGCCATCTACAATATCCAATAACAGTTGACAGTTAACATTAACTTCCCTCATCCTAGTTTTGGTAAGTTAGACTGCCTTGTTGACCTTTATTATTGAACTAAGAACGATTTCCAGATAACTTATCTAGCAAAAAGTACGTTAACGTTTTTTAAAAGCAACTTCAGAGAAGAAGAATTGCTTAAAACGTGTTTCACTCAAAATGTAAAGCTTACTTTTAAAAGGCATCTTGAACTTACCATTACTGTAAAGAATATTCATTCCAGTTCAAAAGAAAAGAAAAAAAAGTTGCAAGATGGTTACTTAACAGTCACTTCACTACATGCTTCTCACAGTCAACTAAACTAAGGAAAGAGTTCTCCATTTTAGATTCAAAGAAAATCTAGGGCTGAGAAAGGGGAAAGAAGAAAACGTACCACCAACATGCAGAGAGAGGGAACCTTCTTTCAGTAAAGGAGCAGCAGCACTTTTTTTAATATTCTCCATTGAGGAAGCAACCAGCTCGGGAATATGTTCAACACCAACAACACGGCCTTCAGGTCCAACCATTAACGCAAAGCATGCAGTCAAATATC

mRNA sequence

GAAGAACGGCCATCTCTTTCTTCACTGCTCCTTATCCTCAATTCCTCACCCCTCACCTCTTTGGGTGTTAAGCCTTGTCCTCTAAAACCCTTCTTCTTCTTCCTCTTCTATCCCTTCCTTTCGATTCAGTAATGGCTTCTACTTCAGCCACTTCCCTTTTCAAGCCTTTATCCAAGCCGGATTCTTGCTTTCTCTCTTTACCTTCTCTATTCACTGGCAGACCCCCACATACTTTCCTCTCTTTCCCTTCAAAATTCATCCCCTTCCATCTTTCCTCGTCGTCTTCCCATTCTTCATGCTTTTACCCTTCAAAGAAGAAACCCCATCTTCCCTCTGTGGCTCAAACTTCCGACTGGGCTCAAGAAGATGACACTATGACCATTGACCCAAAACTCGACAACGACGAAGATGCGGAAGAAGAAGGCGGCCCCCATTGGGAAAATGAAGAGCTCAGTGAAACTGAGTCTCGTATTTCTGATTGGGAAGGTGAAGGCGAAGATGGAGGAAGTGAGGCTGAAGTAGGAGGAGATGAAGAAGAAGAAGAAGAAGGGGAACAAGGGCCTTATGAAGAGCCAAACGAAGATGCTAAACTGTTTGTTGGGAATTTGCCTTATGATATTGACAGTGAAAAGTTAGCAATGCTCTTTGAGAAGGCTGGAACTGTGGAGATTGCTGAGGTTATTTACAACAGAGAAACAGATAGGAGTCGCGGTTTTGGGTTTGTGACAATGAGTACAGTTGAAGAAGCTGAGAAAGCTGTGGATACCTTCAACCGTTATGAGTTATCAGGGAGGCTATTGACTGTTAATAAGGCTGCTCCAAGAGGTACAAGGCAAGAACGCCAACCTCGACCATTCCAACCTGCTTTCAGAATCTATGTGGGCAATCTTCCATGGGATGTAGACAATGCACGCTTGGAGCAGGTCTTTAGTGAACATGGTAAAGTAGTAGATGCTCGGGTTCTTTACGACCGGGACAGTGGCCGTTCTCGTGGCTTTGGCTTTGTGACCATGGCTGATGAAACTGGAATGAATGATGCCATTGCTGCTCTGGATGGACAGAGTCTAGAAGGAAGGGCAATCAGAGTAAATGTTGCTGAGGAAAGACCAAGGCGCAACTTCTGAGCCGAACCATGATGAATCCAAAAGGCCTTTTCTTCTTTTCTTGTTCTATGTTCCTTTTATTCCTTTTTTGTTTTCCCAGAAAGTATAGGTGAGTTTTGTAGTGCCATTGTTTAGCCACCTTATTACAGTGTAATTTGATGTCTTTTATGCTTCCTAAAATTTCAAGTCCTCTATTATTTTGGATAATGTACGAGTTACAAGTTTCGTGCCATGCCCTCCTTTAGTCCTTTTGATTTATGAGCTAGAATTGTGTCAATGTTTTGATATGAATGGAGCAAATTGATTGAAAGCAAAGGATATAAAATCCTTATTTGTACTAAATACCGACGTTGAGGAAGAATATACAGTGCGGATGTTCGAAGCAAGAGGCAAACAGTGTCTAAAAGTTTCTATACACAGCATTTTGATAATAGAGGCAGAGCATCAGAAAGTATTGCCTAAGGCAAGATCAATTGTCACGTAACTGAGCTTCTCGACTTGTAAGAGGCACGTAACGAACGGAAGTCTCGTCGTGGATGCTAACAGAGCCATCACTATCTTTGTCTACAACCTTCAAATCCTGGAATATGTTCCCAACAGGAATCACCATTCTCCCGCCAGGCTTCAACTGATCAATGAGAGCTGGCGGAATTTCAGCAGCTGCTGCTCCAACATGGATAGCGTCGTATGGTGCACACTCGGCCCAACCCTGCCTGCCATCTACAATATCCAATAACAGTTGACAGTTAACATTAACTTCCCTCATCCTAGTTTTGATTCAAAGAAAATCTAGGGCTGAGAAAGGGGAAAGAAGAAAACGTACCACCAACATGCAGAGAGAGGGAACCTTCTTTCAGTAAAGGAGCAGCAGCACTTTTTTTAATATTCTCCATTGAGGAAGCAACCAGCTCGGGAATATGTTCAACACCAACAACACGGCCTTCAGGTCCAACCATTAACGCAAAGCATGCAGTCAAATATC

Coding sequence (CDS)

ATGGCTTCTACTTCAGCCACTTCCCTTTTCAAGCCTTTATCCAAGCCGGATTCTTGCTTTCTCTCTTTACCTTCTCTATTCACTGGCAGACCCCCACATACTTTCCTCTCTTTCCCTTCAAAATTCATCCCCTTCCATCTTTCCTCGTCGTCTTCCCATTCTTCATGCTTTTACCCTTCAAAGAAGAAACCCCATCTTCCCTCTGTGGCTCAAACTTCCGACTGGGCTCAAGAAGATGACACTATGACCATTGACCCAAAACTCGACAACGACGAAGATGCGGAAGAAGAAGGCGGCCCCCATTGGGAAAATGAAGAGCTCAGTGAAACTGAGTCTCGTATTTCTGATTGGGAAGGTGAAGGCGAAGATGGAGGAAGTGAGGCTGAAGTAGGAGGAGATGAAGAAGAAGAAGAAGAAGGGGAACAAGGGCCTTATGAAGAGCCAAACGAAGATGCTAAACTGTTTGTTGGGAATTTGCCTTATGATATTGACAGTGAAAAGTTAGCAATGCTCTTTGAGAAGGCTGGAACTGTGGAGATTGCTGAGGTTATTTACAACAGAGAAACAGATAGGAGTCGCGGTTTTGGGTTTGTGACAATGAGTACAGTTGAAGAAGCTGAGAAAGCTGTGGATACCTTCAACCGTTATGAGTTATCAGGGAGGCTATTGACTGTTAATAAGGCTGCTCCAAGAGGTACAAGGCAAGAACGCCAACCTCGACCATTCCAACCTGCTTTCAGAATCTATGTGGGCAATCTTCCATGGGATGTAGACAATGCACGCTTGGAGCAGGTCTTTAGTGAACATGGTAAAGTAGTAGATGCTCGGGTTCTTTACGACCGGGACAGTGGCCGTTCTCGTGGCTTTGGCTTTGTGACCATGGCTGATGAAACTGGAATGAATGATGCCATTGCTGCTCTGGATGGACAGAGTCTAGAAGGAAGGGCAATCAGAGTAAATGTTGCTGAGGAAAGACCAAGGCGCAACTTCTGA

Protein sequence

MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPSKKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGEGEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF

Homology

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BLAST of Cmc02g0058741 vs. NCBI nr
Match: TYJ98491.1 (28 kDa ribonucleoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 646.0 bits (1665), Expect = 1.8e-181
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
           MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS
Sbjct: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60

Query: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120
           KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE
Sbjct: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120

Query: 121 GEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 180
           GEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI
Sbjct: 121 GEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 180

Query: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR 240
           AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR
Sbjct: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR 240

Query: 241 PFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300
           PFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM
Sbjct: 241 PFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300

Query: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
           NDAIAALDGQSLEGRAIRVNVAEERPRRNF
Sbjct: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 330

[Close]

BLAST of Cmc02g0058741 vs. NCBI nr
Match: KAA0057807.1 (Ribonucleoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 631.7 bits (1628), Expect = 3.5e-177
Identity = 328/332 (98.80%), Postives = 328/332 (98.80%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
           MASTSATSLFK LSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS
Sbjct: 1   MASTSATSLFKTLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60

Query: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDW--E 120
           KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDW  E
Sbjct: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120

Query: 121 GEGEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTV 180
           GEGEDGGSEAEVGGD EEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTV
Sbjct: 121 GEGEDGGSEAEVGGD-EEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTV 180

Query: 181 EIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQ 240
           EIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQ
Sbjct: 181 EIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQ 240

Query: 241 PRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADET 300
           PRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADET
Sbjct: 241 PRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADET 300

Query: 301 GMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
           GMNDAIAALDGQSLEGRAIRVNVAEERPRRNF
Sbjct: 301 GMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331

[Close]

BLAST of Cmc02g0058741 vs. NCBI nr
Match: XP_004138078.1 (28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KAE8652388.1 hypothetical protein Csa_013384 [Cucumis sativus])

HSP 1 Score: 615.9 bits (1587), Expect = 2.0e-172
Identity = 314/330 (95.15%), Postives = 324/330 (98.18%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
           MAS+SATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSS+SS F PS
Sbjct: 1   MASSSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSGFSPS 60

Query: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120
           KKKPHLPSVAQTSDWAQEDDT+TIDPKLDNDE+  EEGGPHWENEELSETESRISDWEGE
Sbjct: 61  KKKPHLPSVAQTSDWAQEDDTITIDPKLDNDENGGEEGGPHWENEELSETESRISDWEGE 120

Query: 121 GEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 180
           GEDGGSEAEVGGDEEE+EEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI
Sbjct: 121 GEDGGSEAEVGGDEEEDEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 180

Query: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR 240
           AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRY+LSGRLLTVNKAAPRG+RQER+PR
Sbjct: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREPR 240

Query: 241 PFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300
           PFQP FRIYVGNLPWDVDN RLEQ+FSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM
Sbjct: 241 PFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300

Query: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
           NDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 NDAIAALDGQSLDGRAIRVNVAEERPRRNF 330

[Close]

BLAST of Cmc02g0058741 vs. NCBI nr
Match: XP_038878997.1 (28 kDa ribonucleoprotein, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 555.1 bits (1429), Expect = 4.2e-154
Identity = 297/333 (89.19%), Postives = 308/333 (92.49%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
           MASTSATS+ KPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPF+L  SSSH+S F  S
Sbjct: 1   MASTSATSILKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFNL--SSSHTSLFSSS 60

Query: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120
           KKK HLPSVAQTSDWAQEDDT+TIDPKL +DE AEE  GPHWEN+ELSETESRISDWEGE
Sbjct: 61  KKKTHLPSVAQTSDWAQEDDTITIDPKLGDDEAAEE--GPHWENQELSETESRISDWEGE 120

Query: 121 GE---DGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGT 180
            E   DGGSEAE  GDEEE      GPYEEPNEDAKLFVGNLPYD+DS+KLAMLFEKAGT
Sbjct: 121 AEGEDDGGSEAE--GDEEE------GPYEEPNEDAKLFVGNLPYDVDSQKLAMLFEKAGT 180

Query: 181 VEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQER 240
           VEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG+R ER
Sbjct: 181 VEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGSRPER 240

Query: 241 QPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADE 300
           QPR FQPAFRIYVGNLPWDVDNARLEQVFSEHGKVV+ARVLYDRDSGRSRGFGFVTMADE
Sbjct: 241 QPRTFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDSGRSRGFGFVTMADE 300

Query: 301 TGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
           TGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF
Sbjct: 301 TGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 321

[Close]

BLAST of Cmc02g0058741 vs. NCBI nr
Match: XP_022134798.1 (28 kDa ribonucleoprotein, chloroplastic-like [Momordica charantia])

HSP 1 Score: 526.9 bits (1356), Expect = 1.2e-145
Identity = 285/338 (84.32%), Postives = 301/338 (89.05%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
           MASTSATS+ KPLSK DSC LSLPS+FT RPPH+FLSFPSK I FHL SSSSHSS F  S
Sbjct: 1   MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHL-SSSSHSSPFSLS 60

Query: 61  KKKPHLPS----VAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISD 120
           KKKPH  S    VAQTSDWAQEDDT+TIDPKL  DE+ E+E GPHWEN+ELSETESRISD
Sbjct: 61  KKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISD 120

Query: 121 WEGEGEDGGSEAEVGGDEE----EEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLF 180
           WEGE EDGGSEAE G D E    EEEE E+G YEEPNEDAKLFVGNLPYD+DS+KLAM+F
Sbjct: 121 WEGEAEDGGSEAE-GEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIF 180

Query: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG 240
            KAGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRYEL GRLLTVNKAAPRG
Sbjct: 181 GKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRG 240

Query: 241 TRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 300
            R ER PR FQ +FRIYVGNLPWDVDNARLEQVFSEHGKVV+ARVLYDRD+GRSRGFGFV
Sbjct: 241 ARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFV 300

Query: 301 TMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
           TMADETGMNDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 TMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 336

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BLAST of Cmc02g0058741 vs. ExPASy Swiss-Prot
Match: Q04836 (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A PE=1 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.1e-83
Identity = 190/348 (54.60%), Postives = 236/348 (67.82%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSL-------------------PSLFTGRPPHTFLSFPSK 60
           MAS+  TS  KPL+  DS   ++                    SL TGR     ++ P  
Sbjct: 1   MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGR-----INLPLS 60

Query: 61  FIPFHLS-SSSSHSSCFYPSKKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGP 120
           F    LS  + +H       KK P +  VAQTSDWA+E    ++         A EE   
Sbjct: 61  FSRVSLSLKTKTH------LKKSPFVSFVAQTSDWAEEGGEGSV---------AVEETEN 120

Query: 121 HWENEELSETESRISDWEGEGEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLP 180
             E++++SE +    D        G E+E  GD  E    E+  + EP+E+AKLFVGNL 
Sbjct: 121 SLESQDVSEGDESEGDASEGDVSEGDESE--GDVSEGAVSERAEFPEPSEEAKLFVGNLA 180

Query: 181 YDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSG 240
           YD++S+ LAMLFE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AV+ FNRY+L+G
Sbjct: 181 YDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNG 240

Query: 241 RLLTVNKAAPRGTRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYD 300
           RLLTVNKAAPRG+R ER PR ++PAFR+YVGNLPWDVDN RLEQ+FSEHGKVV+ARV+YD
Sbjct: 241 RLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYD 300

Query: 301 RDSGRSRGFGFVTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRR 329
           R++GRSRGFGFVTM+D   +N+AI+ALDGQ+LEGRAIRVNVAEERP R
Sbjct: 301 RETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326

[Close]

BLAST of Cmc02g0058741 vs. ExPASy Swiss-Prot
Match: P19682 (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.9e-81
Identity = 153/205 (74.63%), Postives = 178/205 (86.83%), Query Frame = 0


Query: 127 EAEVGGDEEE--EEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVI 186
           + E GGD      E GE   Y+EP+EDAKLFVGNLPYDIDSE LA LF++AG VEIAEVI
Sbjct: 70  DQEQGGDFPSFVGEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVI 129

Query: 187 YNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPRPFQP 246
           YNRETDRSRGFGFVTMSTVEEA+KAV+ +++Y+L+GRLLTVNKAAPRG+R ER PR FQP
Sbjct: 130 YNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQP 189

Query: 247 AFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAI 306
            +RIYVGN+PWD+D+ARLEQVFSEHGKVV ARV++DR+SGRSRGFGFVTM+ E  M++AI
Sbjct: 190 TYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAI 249

Query: 307 AALDGQSLEGRAIRVNVAEERPRRN 330
           A LDGQ+L+GR IRVN AEERPRRN
Sbjct: 250 ANLDGQTLDGRTIRVNAAEERPRRN 274

[Close]

BLAST of Cmc02g0058741 vs. ExPASy Swiss-Prot
Match: P19683 (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.4e-80
Identity = 182/328 (55.49%), Postives = 222/328 (67.68%), Query Frame = 0


Query: 11  KPLSKP-----DSCFLSLPSLFTGRPPHTFLSFP---SKFIPFH-LSSSSSHSSCFYPSK 70
           KP+ KP     +SC +SLP LF         ++P   +   P   L  S ++S C    K
Sbjct: 6   KPIIKPSSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKLLHLSCTYSPCILSPK 65

Query: 71  KKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGEG 130
           KK         S   +E++T+ +D +        +E G  +  E   E        E  G
Sbjct: 66  KK------TSVSALQEEENTLILDGQ-------GQESGDLFNFEPSGEETEEEGFVEAVG 125

Query: 131 EDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEIA 190
            D G   EV  DEEEEE      ++EP EDAKLFVGNLPYD+DSE LA LFE+AG VEIA
Sbjct: 126 -DAGESDEVEADEEEEE------FQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIA 185

Query: 191 EVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPRP 250
           EVIYNR+TD+SRGFGFVTMSTVEEAEKAV+ +NRY+++GRLLTVNKAA RG R ER PR 
Sbjct: 186 EVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRT 245

Query: 251 FQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMN 310
           F+ ++RIYVGN+PW +D+ARLEQ+FSEHGKVV ARV+YDR++GRSRGFGFVTMA E  M+
Sbjct: 246 FEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMS 305

Query: 311 DAIAALDGQSLEGRAIRVNVAEERPRRN 330
           DAIA LDGQSL+GR IRVNVAE+R RRN
Sbjct: 306 DAIANLDGQSLDGRTIRVNVAEDRSRRN 313

[Close]

BLAST of Cmc02g0058741 vs. ExPASy Swiss-Prot
Match: Q9FGS0 (RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31B PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 7.3e-77
Identity = 156/220 (70.91%), Postives = 184/220 (83.64%), Query Frame = 0


Query: 112 SRISDW--EGEGEDGG-SEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKL 171
           S+ S+W  E EGEDG      V  DE  E E   G + EP E+AKLFVGNLPYD+DS+ L
Sbjct: 71  SQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVG-FPEPPEEAKLFVGNLPYDVDSQAL 130

Query: 172 AMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKA 231
           AMLFE+AGTVEI+EVIYNR+TD+SRGFGFVTMSTVEEAEKAV+ FN +E++GR LTVN+A
Sbjct: 131 AMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRA 190

Query: 232 APRGTRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRG 291
           APRG+R ERQPR +  AFRIYVGNLPWDVD+ RLE++FSEHGKVVDARV+ DR++GRSRG
Sbjct: 191 APRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRG 250

Query: 292 FGFVTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRR 329
           FGFV M++E  +N AIAALDGQ+LEGRAI+VNVAEER RR
Sbjct: 251 FGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289

[Close]

BLAST of Cmc02g0058741 vs. ExPASy Swiss-Prot
Match: P28644 (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 9.6e-77
Identity = 165/263 (62.74%), Postives = 194/263 (73.76%), Query Frame = 0


Query: 69  VAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGEGEDGGSEA 128
           VAQTS+W QE  T  +   L+ + D   EG   W                      GSE 
Sbjct: 2   VAQTSEWEQEGSTNAV---LEGESD--PEGAVSW----------------------GSET 61

Query: 129 EVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEVIYNRE 188
           +V   +E   EG QG + EP E+AKLFVGNLPYD+DSEKLA +F+ AG VEIAEVIYNRE
Sbjct: 62  QV--SDEGGVEGGQG-FSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRE 121

Query: 189 TDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR-PFQPAFR 248
           TDRSRGFGFVTMSTVEEAEKAV+  N Y++ GR LTVNKAAPRG+  ER PR  F+P+ R
Sbjct: 122 TDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGS-PERAPRGDFEPSCR 181

Query: 249 IYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAAL 308
           +YVGNLPWDVD +RLEQ+FSEHGKVV ARV+ DR++GRSRGFGFVTM+ E+ +NDAIAAL
Sbjct: 182 VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAAL 233

Query: 309 DGQSLEGRAIRVNVAEERPRRNF 331
           DGQ+L+GRA+RVNVAEERPRR F
Sbjct: 242 DGQTLDGRAVRVNVAEERPRRAF 233

[Close]

BLAST of Cmc02g0058741 vs. ExPASy TrEMBL
Match: A0A5D3BIH5 (28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00930 PE=4 SV=1)

HSP 1 Score: 646.0 bits (1665), Expect = 8.7e-182
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
           MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS
Sbjct: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60

Query: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120
           KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE
Sbjct: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120

Query: 121 GEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 180
           GEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI
Sbjct: 121 GEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 180

Query: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR 240
           AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR
Sbjct: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR 240

Query: 241 PFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300
           PFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM
Sbjct: 241 PFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300

Query: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
           NDAIAALDGQSLEGRAIRVNVAEERPRRNF
Sbjct: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 330

[Close]

BLAST of Cmc02g0058741 vs. ExPASy TrEMBL
Match: A0A5A7USX4 (Ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00900 PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.7e-177
Identity = 328/332 (98.80%), Postives = 328/332 (98.80%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
           MASTSATSLFK LSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS
Sbjct: 1   MASTSATSLFKTLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60

Query: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDW--E 120
           KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDW  E
Sbjct: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120

Query: 121 GEGEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTV 180
           GEGEDGGSEAEVGGD EEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTV
Sbjct: 121 GEGEDGGSEAEVGGD-EEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTV 180

Query: 181 EIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQ 240
           EIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQ
Sbjct: 181 EIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQ 240

Query: 241 PRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADET 300
           PRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADET
Sbjct: 241 PRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADET 300

Query: 301 GMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
           GMNDAIAALDGQSLEGRAIRVNVAEERPRRNF
Sbjct: 301 GMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331

[Close]

BLAST of Cmc02g0058741 vs. ExPASy TrEMBL
Match: A0A0A0LNS8 (Ribonucleoprotein OS=Cucumis sativus OX=3659 GN=Csa_1G002890 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 9.7e-173
Identity = 314/330 (95.15%), Postives = 324/330 (98.18%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
           MAS+SATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSS+SS F PS
Sbjct: 74  MASSSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSGFSPS 133

Query: 61  KKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISDWEGE 120
           KKKPHLPSVAQTSDWAQEDDT+TIDPKLDNDE+  EEGGPHWENEELSETESRISDWEGE
Sbjct: 134 KKKPHLPSVAQTSDWAQEDDTITIDPKLDNDENGGEEGGPHWENEELSETESRISDWEGE 193

Query: 121 GEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 180
           GEDGGSEAEVGGDEEE+EEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI
Sbjct: 194 GEDGGSEAEVGGDEEEDEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEI 253

Query: 181 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQERQPR 240
           AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRY+LSGRLLTVNKAAPRG+RQER+PR
Sbjct: 254 AEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREPR 313

Query: 241 PFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 300
           PFQP FRIYVGNLPWDVDN RLEQ+FSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM
Sbjct: 314 PFQPTFRIYVGNLPWDVDNGRLEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGM 373

Query: 301 NDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
           NDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 374 NDAIAALDGQSLDGRAIRVNVAEERPRRNF 403

[Close]

BLAST of Cmc02g0058741 vs. ExPASy TrEMBL
Match: A0A6J1C316 (28 kDa ribonucleoprotein, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111006981 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.9e-146
Identity = 285/338 (84.32%), Postives = 301/338 (89.05%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSHSSCFYPS 60
           MASTSATS+ KPLSK DSC LSLPS+FT RPPH+FLSFPSK I FHL SSSSHSS F  S
Sbjct: 1   MASTSATSILKPLSKADSCLLSLPSVFTCRPPHSFLSFPSKLIRFHL-SSSSHSSPFSLS 60

Query: 61  KKKPHLPS----VAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRISD 120
           KKKPH  S    VAQTSDWAQEDDT+TIDPKL  DE+ E+E GPHWEN+ELSETESRISD
Sbjct: 61  KKKPHPSSLVSFVAQTSDWAQEDDTITIDPKLGGDEEEEDEQGPHWENQELSETESRISD 120

Query: 121 WEGEGEDGGSEAEVGGDEE----EEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAMLF 180
           WEGE EDGGSEAE G D E    EEEE E+G YEEPNEDAKLFVGNLPYD+DS+KLAM+F
Sbjct: 121 WEGEAEDGGSEAE-GEDGEGGLLEEEEEEEGSYEEPNEDAKLFVGNLPYDVDSQKLAMIF 180

Query: 181 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG 240
            KAGTVEIAEVIYNRETD+SRGFGFVTMSTVEEAEKAVDTFNRYEL GRLLTVNKAAPRG
Sbjct: 181 GKAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVDTFNRYELEGRLLTVNKAAPRG 240

Query: 241 TRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFV 300
            R ER PR FQ +FRIYVGNLPWDVDNARLEQVFSEHGKVV+ARVLYDRD+GRSRGFGFV
Sbjct: 241 ARPERTPRTFQSSFRIYVGNLPWDVDNARLEQVFSEHGKVVEARVLYDRDTGRSRGFGFV 300

Query: 301 TMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
           TMADETGMNDAIAALDGQSL+GRAIRVNVAEERPRRNF
Sbjct: 301 TMADETGMNDAIAALDGQSLDGRAIRVNVAEERPRRNF 336

[Close]

BLAST of Cmc02g0058741 vs. ExPASy TrEMBL
Match: A0A6J1JFY1 (28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111484771 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.6e-135
Identity = 271/339 (79.94%), Postives = 293/339 (86.43%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSLPSLFTGRPPHTFLSFPSKF--IPFHLSSSSSHSSCFY 60
           MAS+SATS+ KPLSK DSC LSLPSLFT RPPH+FLSFPSKF   PFHLSSS   SS F 
Sbjct: 1   MASSSATSILKPLSKADSCLLSLPSLFTCRPPHSFLSFPSKFTTAPFHLSSSHC-SSLFS 60

Query: 61  PSKKKPHL----PSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGPHWENEELSETESRI 120
            SKKK HL     SVAQ+S+W QEDDT+TIDPKL  DED EE  GPHWEN+ELSE ESRI
Sbjct: 61  SSKKKTHLLSLVASVAQSSEWGQEDDTITIDPKLSGDEDGEE--GPHWENQELSENESRI 120

Query: 121 SDWEGEGE---DGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKLAML 180
           SDWEGEGE   DGGSE E GG  E  +E E+GP EEPNEDAKL+VGNL YD+DS+KLAML
Sbjct: 121 SDWEGEGEGEDDGGSEGEGGGVLELGDE-EEGPLEEPNEDAKLYVGNLSYDVDSQKLAML 180

Query: 181 FEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPR 240
           FEKAGTVEIAEVIY+R++DRSRGFGFVTMS+VEEAEKAVDTFNRYE  GR L VNKAA R
Sbjct: 181 FEKAGTVEIAEVIYDRQSDRSRGFGFVTMSSVEEAEKAVDTFNRYEFLGRTLVVNKAAAR 240

Query: 241 GTRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF 300
           G+R ERQPR FQPAFRIYVGNL W+VD+ARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF
Sbjct: 241 GSRPERQPRTFQPAFRIYVGNLAWEVDSARLEQVFSEHGKVVDARVLYDRDSGRSRGFGF 300

Query: 301 VTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRRNF 331
           VTMADETGMNDAIAALDGQS++GRAIRVNVAEE+PRRNF
Sbjct: 301 VTMADETGMNDAIAALDGQSVDGRAIRVNVAEEKPRRNF 335

[Close]

BLAST of Cmc02g0058741 vs. TAIR 10
Match: AT4G24770.1 (31-kDa RNA binding protein )

HSP 1 Score: 311.6 bits (797), Expect = 7.5e-85
Identity = 190/348 (54.60%), Postives = 236/348 (67.82%), Query Frame = 0


Query: 1   MASTSATSLFKPLSKPDSCFLSL-------------------PSLFTGRPPHTFLSFPSK 60
           MAS+  TS  KPL+  DS   ++                    SL TGR     ++ P  
Sbjct: 1   MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGR-----INLPLS 60

Query: 61  FIPFHLS-SSSSHSSCFYPSKKKPHLPSVAQTSDWAQEDDTMTIDPKLDNDEDAEEEGGP 120
           F    LS  + +H       KK P +  VAQTSDWA+E    ++         A EE   
Sbjct: 61  FSRVSLSLKTKTH------LKKSPFVSFVAQTSDWAEEGGEGSV---------AVEETEN 120

Query: 121 HWENEELSETESRISDWEGEGEDGGSEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLP 180
             E++++SE +    D        G E+E  GD  E    E+  + EP+E+AKLFVGNL 
Sbjct: 121 SLESQDVSEGDESEGDASEGDVSEGDESE--GDVSEGAVSERAEFPEPSEEAKLFVGNLA 180

Query: 181 YDIDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSG 240
           YD++S+ LAMLFE+AGTVEIAEVIYNRETD+SRGFGFVTMS+V+EAE AV+ FNRY+L+G
Sbjct: 181 YDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNG 240

Query: 241 RLLTVNKAAPRGTRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYD 300
           RLLTVNKAAPRG+R ER PR ++PAFR+YVGNLPWDVDN RLEQ+FSEHGKVV+ARV+YD
Sbjct: 241 RLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYD 300

Query: 301 RDSGRSRGFGFVTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRR 329
           R++GRSRGFGFVTM+D   +N+AI+ALDGQ+LEGRAIRVNVAEERP R
Sbjct: 301 RETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326

[Close]

BLAST of Cmc02g0058741 vs. TAIR 10
Match: AT5G50250.1 (chloroplast RNA-binding protein 31B )

HSP 1 Score: 288.9 bits (738), Expect = 5.2e-78
Identity = 156/220 (70.91%), Postives = 184/220 (83.64%), Query Frame = 0


Query: 112 SRISDW--EGEGEDGG-SEAEVGGDEEEEEEGEQGPYEEPNEDAKLFVGNLPYDIDSEKL 171
           S+ S+W  E EGEDG      V  DE  E E   G + EP E+AKLFVGNLPYD+DS+ L
Sbjct: 71  SQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVG-FPEPPEEAKLFVGNLPYDVDSQAL 130

Query: 172 AMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKA 231
           AMLFE+AGTVEI+EVIYNR+TD+SRGFGFVTMSTVEEAEKAV+ FN +E++GR LTVN+A
Sbjct: 131 AMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRA 190

Query: 232 APRGTRQERQPRPFQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRG 291
           APRG+R ERQPR +  AFRIYVGNLPWDVD+ RLE++FSEHGKVVDARV+ DR++GRSRG
Sbjct: 191 APRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRG 250

Query: 292 FGFVTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRR 329
           FGFV M++E  +N AIAALDGQ+LEGRAI+VNVAEER RR
Sbjct: 251 FGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289

[Close]

BLAST of Cmc02g0058741 vs. TAIR 10
Match: AT2G37220.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 184.9 bits (468), Expect = 1.1e-46
Identity = 112/235 (47.66%), Postives = 141/235 (60.00%), Query Frame = 0


Query: 117 WEGEGEDGGSEAEVGGDEEEEEEG--EQGPYEEP--NEDAKLFVGNLPYDIDSEKLAMLF 176
           W            +  + E EE+G  +  P +E   + D KLFVGNLP+++DS +LA LF
Sbjct: 52  WNSPASRFARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLF 111

Query: 177 EKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRG 236
           E AG VE+ EVIY++ T RSRGFGFVTMS+V E E A   FN YEL GR L VN   P  
Sbjct: 112 ESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPP 171

Query: 237 TRQERQPRPFQPAF-------------------RIYVGNLPWDVDNARLEQVFSEHGKVV 296
            R++   R  + +F                   R+YVGNL W VD+  LE +FSE GKVV
Sbjct: 172 KREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVV 231

Query: 297 DARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLEGRAIRVNVAEERPRR 329
           +ARV+YDRDSGRS+GFGFVT      + +AI +LDG  L+GR IRV+ AE RP R
Sbjct: 232 EARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286

[Close]

BLAST of Cmc02g0058741 vs. TAIR 10
Match: AT3G53460.1 (chloroplast RNA-binding protein 29 )

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-40
Identity = 109/269 (40.52%), Postives = 136/269 (50.56%), Query Frame = 0


Query: 126 SEAEVGGDEEEEEEGEQGPYEEP--NEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEV 185
           S+ EV  D+   +  +  P E    + D KLFVGNL +++DS +LA LFE AG VE+ EV
Sbjct: 71  SDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEV 130

Query: 186 IYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQE---RQPR 245
           IY++ T RSRGFGFVTMST  E E A   FN YE  GR L VN   P   R+E   R PR
Sbjct: 131 IYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190

Query: 246 P----------------------------------------------------------- 305
                                                                       
Sbjct: 191 SGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSGSG 250

Query: 306 --FQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG 329
                  R+YVGNL W VD+  LE +F+E GKVV+ARV+YDRDSGRS+GFGFVT++    
Sbjct: 251 SGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQE 310

[Close]

BLAST of Cmc02g0058741 vs. TAIR 10
Match: AT3G53460.2 (chloroplast RNA-binding protein 29 )

HSP 1 Score: 164.5 bits (415), Expect = 1.5e-40
Identity = 109/269 (40.52%), Postives = 136/269 (50.56%), Query Frame = 0


Query: 126 SEAEVGGDEEEEEEGEQGPYEEP--NEDAKLFVGNLPYDIDSEKLAMLFEKAGTVEIAEV 185
           S+ EV  D+   +  +  P E    + D KLFVGNL +++DS +LA LFE AG VE+ EV
Sbjct: 71  SDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEV 130

Query: 186 IYNRETDRSRGFGFVTMSTVEEAEKAVDTFNRYELSGRLLTVNKAAPRGTRQE---RQPR 245
           IY++ T RSRGFGFVTMST  E E A   FN YE  GR L VN   P   R+E   R PR
Sbjct: 131 IYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190

Query: 246 P----------------------------------------------------------- 305
                                                                       
Sbjct: 191 SGGYGSERGGGYGSERGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSGSG 250

Query: 306 --FQPAFRIYVGNLPWDVDNARLEQVFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETG 329
                  R+YVGNL W VD+  LE +F+E GKVV+ARV+YDRDSGRS+GFGFVT++    
Sbjct: 251 SGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQE 310

The following BLAST results are available for this feature:

BLAST of Cmc02g0058741 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98491.1	1.8e-181	100.00	28 kDa ribonucleoprotein [Cucumis melo var. makuwa]	[more]
KAA0057807.1	3.5e-177	98.80	Ribonucleoprotein [Cucumis melo var. makuwa]	[more]
XP_004138078.1	2.0e-172	95.15	28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus] >KAE8652388.1 hypothet...	[more]
XP_038878997.1	4.2e-154	89.19	28 kDa ribonucleoprotein, chloroplastic-like [Benincasa hispida]	[more]
XP_022134798.1	1.2e-145	84.32	28 kDa ribonucleoprotein, chloroplastic-like [Momordica charantia]	[more]

BLAST of Cmc02g0058741 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q04836	1.1e-83	54.60	31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31A...	[more]
P19682	4.9e-81	74.63	28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
P19683	1.4e-80	55.49	31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=1 SV=...	[more]
Q9FGS0	7.3e-77	70.91	RNA-binding protein CP31B, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CP31...	[more]
P28644	9.6e-77	62.74	28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1	[more]

BLAST of Cmc02g0058741 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BIH5	8.7e-182	100.00	28 kDa ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7USX4	1.7e-177	98.80	Ribonucleoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00...	[more]
A0A0A0LNS8	9.7e-173	95.15	Ribonucleoprotein OS=Cucumis sativus OX=3659 GN=Csa_1G002890 PE=4 SV=1	[more]
A0A6J1C316	5.9e-146	84.32	28 kDa ribonucleoprotein, chloroplastic-like OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1JFY1	1.6e-135	79.94	28 kDa ribonucleoprotein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of Cmc02g0058741 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24770.1	7.5e-85	54.60	31-kDa RNA binding protein	[more]
AT5G50250.1	5.2e-78	70.91	chloroplast RNA-binding protein 31B	[more]
AT2G37220.1	1.1e-46	47.66	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G53460.1	1.5e-40	40.52	chloroplast RNA-binding protein 29	[more]
AT3G53460.2	1.5e-40	40.52	chloroplast RNA-binding protein 29	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 153..226 e-value: 5.9E-26 score: 102.2 coord: 247..320 e-value: 1.8E-28 score: 110.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 248..318 e-value: 1.4E-20 score: 72.9 coord: 154..223 e-value: 1.6E-20 score: 72.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 152..230 score: 18.700279
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 246..324 score: 20.149988
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 80..235 e-value: 1.4E-29 score: 105.1 coord: 236..329 e-value: 5.0E-29 score: 103.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..151
None	No IPR available	PANTHER	PTHR48025:SF8	RIBONUCLEOPROTEIN	coord: 1..329
None	No IPR available	PANTHER	PTHR48025	OS02G0815200 PROTEIN	coord: 1..329
None	No IPR available	CDD	cd12399	RRM_HP0827_like	coord: 153..230 e-value: 4.62533E-35 score: 120.796
None	No IPR available	CDD	cd12399	RRM_HP0827_like	coord: 247..323 e-value: 3.13631E-34 score: 118.485
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 147..241
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 239..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc02g0058741.1	Cmc02g0058741.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901259	chloroplast rRNA processing
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding