Cmc01g0022071 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0022071
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr01: 20852579 .. 20853145 (+)
RNA-Seq ExpressionCmc01g0022071
SyntenyCmc01g0022071
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTATGGTGGTAGTACTCCAATTTTGCAAAAGTCAGCAATGAGAGTCCTTAATCTAACATGCAGCACTTCTGGGTGTGAACACAATTGGAGAGTTTTCTAACATGTAAGTGATTATTTTGTTTTTTAACATTATTAATTTAAGATTTAAATTATTCTTGTAACTCCATATTGGTAATAATTTGTAGATTCATATGAAAAAGAGACAGATTGGAGCAAAAGTGCTTAAATGATTTGGTTTATGTAAAGTATAATCAAACACTTAAAGAGCACTTTGATCTAAAGGATCAACTTGATCCAATCTCCTTGGATAATATCGACAAGAATAAAAATGGAAGGTACATTGGATGAAGAAAATAATGAAGCTGAAGTTGACAATAAGAGAGTTTTTGATGACATCAACCTCACATGGGGAGATGTAGATCGTGCTACTGTTAGAGAACCGATCACATACACTAGATCAAAAGGAAATTCAATTGCCTCTACCTCCATTTCTAGAGTTCAAAAGAAACACCAACTATACAAGTGGTTAGTGATGAAAATGCAGACGACAATGAAGAGGAATTAG

mRNA sequence

CTTTATGGTGGTAGTACTCCAATTTTGCAAAAGTCAGCAATGAGAGTCCTTAATCTAACATGCAGCACTTCTGGGTGTGAACACAATTGGAGAGTTTTCTAACATATTCATATGAAAAAGAGACAGATTGGAGCAAAAGTGCTTAAATGATTTGGTTTATGTAAAGTATAATCAAACACTTAAAGAGCACTTTGATCTAAAGGATCAACTTGATCCAATCTCCTTGGATAATATCGACAAGAATAAAAATGGAAGGTACATTGGATGAAGAAAATAATGAAGCTGAAGTTGACAATAAGAGAGTTTTTGATGACATCAACCTCACATGGGGAGATGTAGATCGTGCTACTGTTAGAGAACCGATCACATACACTAGATCAAAAGGAAATTCAATTGCCTCTACCTCCATTTCTAGAGTTCAAAAGAAACACCAACTATACAAGTGGTTAGTGATGAAAATGCAGACGACAATGAAGAGGAATTAG

Coding sequence (CDS)

ATGGAAGGTACATTGGATGAAGAAAATAATGAAGCTGAAGTTGACAATAAGAGAGTTTTTGATGACATCAACCTCACATGGGGAGATGTAGATCGTGCTACTGTTAGAGAACCGATCACATACACTAGATCAAAAGGAAATTCAATTGCCTCTACCTCCATTTCTAGAGTTCAAAAGAAACACCAACTATACAAGTGGTTAGTGATGAAAATGCAGACGACAATGAAGAGGAATTAG

Protein sequence

MEGTLDEENNEAEVDNKRVFDDINLTWGDVDRATVREPITYTRSKGNSIASTSISRVQKKHQLYKWLVMKMQTTMKRN
Homology
[Close]
BLAST of Cmc01g0022071 vs. NCBI nr
Match: XP_038905943.1 (uncharacterized protein LOC120091866 [Benincasa hispida])

HSP 1 Score: 82.0 bits (201), Expect = 2.5e-12
Identity = 45/59 (76.27%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 3   GTLDEENNEAEVDNKRVFDDINLTWGDVDRAT-VREPITYTRSKGNSIASTSISRVQKK 61
           GTLDEENNEAEVDN+ VFDD +LTWGDV RA  V E ITYTRSKG S ASTS  RVQK+
Sbjct: 74  GTLDEENNEAEVDNELVFDDDDLTWGDVTRANGVTESITYTRSKGKSAASTSTFRVQKQ 132

[Close]
BLAST of Cmc01g0022071 vs. NCBI nr
Match: XP_022147661.1 (uncharacterized protein LOC111016530 [Momordica charantia])

HSP 1 Score: 53.5 bits (127), Expect = 9.3e-04
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0 

Query: 3   GTLDEENNEAEVDNKRVFDDINLTWGDVDRAT-VREPI----TYTRSKGNSIA--STSIS 62
           GTL+EE+ + E  N+ VFDD +LTWGDV  A+ VREPI    TYTRSKG S A  + + S
Sbjct: 35  GTLEEEDGQEE--NELVFDDDDLTWGDVAEASGVREPIRQTRTYTRSKGKSPATPAPTTS 94

Query: 63  RVQKKHQL 64
           RV+K  Q+
Sbjct: 95  RVRKSVQV 100

[Close]
BLAST of Cmc01g0022071 vs. ExPASy TrEMBL
Match: A0A6J1D316 (uncharacterized protein LOC111016530 OS=Momordica charantia OX=3673 GN=LOC111016530 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.5e-04
Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 0 

Query: 3   GTLDEENNEAEVDNKRVFDDINLTWGDVDRAT-VREPI----TYTRSKGNSIA--STSIS 62
           GTL+EE+ + E  N+ VFDD +LTWGDV  A+ VREPI    TYTRSKG S A  + + S
Sbjct: 35  GTLEEEDGQEE--NELVFDDDDLTWGDVAEASGVREPIRQTRTYTRSKGKSPATPAPTTS 94

Query: 63  RVQKKHQL 64
           RV+K  Q+
Sbjct: 95  RVRKSVQV 100

The following BLAST results are available for this feature:
BLAST of Cmc01g0022071 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038905943.12.5e-1276.27uncharacterized protein LOC120091866 [Benincasa hispida][more]
XP_022147661.19.3e-0454.41uncharacterized protein LOC111016530 [Momordica charantia][more]
BLAST of Cmc01g0022071 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc01g0022071 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D3164.5e-0454.41uncharacterized protein LOC111016530 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
BLAST of Cmc01g0022071 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0022071.1Cmc01g0022071.1mRNA