Cmc01g0014501 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0014501
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
LocationCMiso1.1chr01: 11493567 .. 11494469 (-)
RNA-Seq ExpressionCmc01g0014501
SyntenyCmc01g0014501
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTAGAAACTGAGGATACCTACAAGACTGATAAGAAAGAGAAAGGAGATGAAGCTGATATCCCTATGATTCGGTTCTTACTACAACAGTACACCGATATCTTTACCACACCAAAGGGTCTCCCTCCAAAGAGAGATATCGACCACAGGATCTTGACACTGCCCAACCAAAATCTGATCAATGTAAGACCGTATAAATATGGACATATCCAAAAAGGGGAGATAGAGAAGTTAGTGGCTGAAATGCTGCAAGATGGTATCATCCGCCCAAGCCGAAGCCCATATTCCAACCCTGTTCTCCTGGTTAAAAATAAAGATGGGGGGTGGCGGTTTTGTGTTGATTACCGGAAGTTGAATCAAGCTACAGTCTCAGATAAGTTTCCTATCCCGGTGATTGAAGAACTATTGGATGAGCTATATGGAGCTGCGATTTTCTCTAAACTGGACCTCAAATCGGGTTACCACCAAATTAGAATGAAGGAAGAAGATATAGAGAAGACAACGTTTCGCACCCATGAAGGCCATTATGAATTCCTAGTGATGCCTTTCGGTCTCACAAATGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGTTGTGTTTTGGTATTTTTTGACGATATCTTAGTATATAGCAGTGACATATCTGAACATGAGAAACACCTAGGAATGGTTTTTGCTGTGTTAAGGGATAATCAACTTTATGCCAATCACAAGAAATGTGTATTTGCTCATTCTAGAATCCAATATTTGGGACACCAAATATCCAAGGCAGGGGTAGAGGCAGATGAATATAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCAGATGTGACTGAACTAAGAGGATTTCTGGGGCTGACTAGTTATTACTGA

mRNA sequence

ATGGAAGTAGAAACTGAGGATACCTACAAGACTGATAAGAAAGAGAAAGGAGATGAAGCTGATATCCCTATGATTCGGTTCTTACTACAACAGTACACCGATATCTTTACCACACCAAAGGGTCTCCCTCCAAAGAGAGATATCGACCACAGGATCTTGACACTGCCCAACCAAAATCTGATCAATGTAAGACCGTATAAATATGGACATATCCAAAAAGGGGAGATAGAGAAGTTAGTGGCTGAAATGCTGCAAGATGGTATCATCCGCCCAAGCCGAAGCCCATATTCCAACCCTGTTCTCCTGGTTAAAAATAAAGATGGGGGGTGGCGGTTTTGTGTTGATTACCGGAAGTTGAATCAAGCTACAGTCTCAGATAAGTTTCCTATCCCGGTGATTGAAGAACTATTGGATGAGCTATATGGAGCTGCGATTTTCTCTAAACTGGACCTCAAATCGGGTTACCACCAAATTAGAATGAAGGAAGAAGATATAGAGAAGACAACGTTTCGCACCCATGAAGGCCATTATGAATTCCTAGTGATGCCTTTCGGTCTCACAAATGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGTTGTGTTTTGGTATTTTTTGACGATATCTTAGTATATAGCAGTGACATATCTGAACATGAGAAACACCTAGGAATGGTTTTTGCTGTGTTAAGGGATAATCAACTTTATGCCAATCACAAGAAATGTGTATTTGCTCATTCTAGAATCCAATATTTGGGACACCAAATATCCAAGGCAGGGGTAGAGGCAGATGAATATAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCAGATGTGACTGAACTAAGAGGATTTCTGGGGCTGACTAGTTATTACTGA

Coding sequence (CDS)

ATGGAAGTAGAAACTGAGGATACCTACAAGACTGATAAGAAAGAGAAAGGAGATGAAGCTGATATCCCTATGATTCGGTTCTTACTACAACAGTACACCGATATCTTTACCACACCAAAGGGTCTCCCTCCAAAGAGAGATATCGACCACAGGATCTTGACACTGCCCAACCAAAATCTGATCAATGTAAGACCGTATAAATATGGACATATCCAAAAAGGGGAGATAGAGAAGTTAGTGGCTGAAATGCTGCAAGATGGTATCATCCGCCCAAGCCGAAGCCCATATTCCAACCCTGTTCTCCTGGTTAAAAATAAAGATGGGGGGTGGCGGTTTTGTGTTGATTACCGGAAGTTGAATCAAGCTACAGTCTCAGATAAGTTTCCTATCCCGGTGATTGAAGAACTATTGGATGAGCTATATGGAGCTGCGATTTTCTCTAAACTGGACCTCAAATCGGGTTACCACCAAATTAGAATGAAGGAAGAAGATATAGAGAAGACAACGTTTCGCACCCATGAAGGCCATTATGAATTCCTAGTGATGCCTTTCGGTCTCACAAATGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGTTGTGTTTTGGTATTTTTTGACGATATCTTAGTATATAGCAGTGACATATCTGAACATGAGAAACACCTAGGAATGGTTTTTGCTGTGTTAAGGGATAATCAACTTTATGCCAATCACAAGAAATGTGTATTTGCTCATTCTAGAATCCAATATTTGGGACACCAAATATCCAAGGCAGGGGTAGAGGCAGATGAATATAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCAGATGTGACTGAACTAAGAGGATTTCTGGGGCTGACTAGTTATTACTGA

Protein sequence

MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNLINVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLNQATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY
Homology
[Close]
BLAST of Cmc01g0014501 vs. NCBI nr
Match: KAA0039128.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26985.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 589.0 bits (1517), Expect = 2.4e-164
Identity = 284/300 (94.67%), Postives = 290/300 (96.67%), Query Frame = 0 

Query: 1   MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNL 60
           MEVETEDTYKTD+KEKGDEADIPMIRFLLQQYTDIFTTPK LPPKRDIDHRILTLPNQ  
Sbjct: 538 MEVETEDTYKTDEKEKGDEADIPMIRFLLQQYTDIFTTPKDLPPKRDIDHRILTLPNQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYS+PVLLVK KDGGWRFCVDY KLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSSPVLLVKKKDGGWRFCVDYWKLN 657

Query: 121 QATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFL 180
           QATVSDKFPIPVIEELLDELYGAA+FSKLDLKSGYHQIRMKEEDIEKT FRTHEGHYEFL
Sbjct: 658 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDIL YSSDI+EH+KHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILAYSSDITEHKKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 300
            LYANHKKCVFAHSRIQYLGHQISKAGVEADE KIRSMV+WPRPSDVTELRGFLGLT YY
Sbjct: 778 HLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMVDWPRPSDVTELRGFLGLTGYY 837

[Close]
BLAST of Cmc01g0014501 vs. NCBI nr
Match: TYK14624.1 (uncharacterized protein E5676_scaffold1275G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 589.0 bits (1517), Expect = 2.4e-164
Identity = 282/300 (94.00%), Postives = 290/300 (96.67%), Query Frame = 0 

Query: 1   MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNL 60
           MEVE E+ YKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQ  
Sbjct: 293 MEVEVEEIYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQRP 352

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLN 120
           INVRPYKYGH+QKGEIE LVAEMLQDGIIRPSRSPYS+ VLLVK KDGGWRFCVDYRKLN
Sbjct: 353 INVRPYKYGHVQKGEIENLVAEMLQDGIIRPSRSPYSSLVLLVKKKDGGWRFCVDYRKLN 412

Query: 121 QATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFL 180
           QATVSDKFPIPVIEELLDELYGAA+FSKLDLKSGYHQIRMKEEDIEKT FRTHEGHYEFL
Sbjct: 413 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 472

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSD++EHEKHLGM+FAVLRDN
Sbjct: 473 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDLTEHEKHLGMIFAVLRDN 532

Query: 241 QLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 300
           QLYANHKKCVFAHSRIQYLGHQISKAGVEAD+ KIRSMVNWPRPSDVTELRGFLGLT YY
Sbjct: 533 QLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMVNWPRPSDVTELRGFLGLTGYY 592

[Close]
BLAST of Cmc01g0014501 vs. NCBI nr
Match: TYK29308.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 589.0 bits (1517), Expect = 2.4e-164
Identity = 282/300 (94.00%), Postives = 290/300 (96.67%), Query Frame = 0 

Query: 1   MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNL 60
           MEVE E+ YKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQ  
Sbjct: 293 MEVEVEEIYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQRP 352

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLN 120
           INVRPYKYGH+QKGEIE LVAEMLQDGIIRPSRSPYS+ VLLVK KDGGWRFCVDYRKLN
Sbjct: 353 INVRPYKYGHVQKGEIENLVAEMLQDGIIRPSRSPYSSLVLLVKKKDGGWRFCVDYRKLN 412

Query: 121 QATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFL 180
           QATVSDKFPIPVIEELLDELYGAA+FSKLDLKSGYHQIRMKEEDIEKT FRTHEGHYEFL
Sbjct: 413 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 472

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSD++EHEKHLGM+FAVLRDN
Sbjct: 473 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDLTEHEKHLGMIFAVLRDN 532

Query: 241 QLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 300
           QLYANHKKCVFAHSRIQYLGHQISKAGVEAD+ KIRSMVNWPRPSDVTELRGFLGLT YY
Sbjct: 533 QLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMVNWPRPSDVTELRGFLGLTGYY 592

[Close]
BLAST of Cmc01g0014501 vs. NCBI nr
Match: KAA0061073.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 586.3 bits (1510), Expect = 1.5e-163
Identity = 280/300 (93.33%), Postives = 290/300 (96.67%), Query Frame = 0 

Query: 1   MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNL 60
           MEVET+DTYKTD+KE+GDEADIPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLP+Q  
Sbjct: 538 MEVETDDTYKTDEKEEGDEADIPMIRFLLQQYKDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDG+IRPSRSPYS+PVLLVK KDGGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 657

Query: 121 QATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAA+FSKLDLKSGYHQIRMKEED+EKT FRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDVEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYS DI E EKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDIIEREKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 300
           QLYANHKKCVFAHS+IQYLGHQISKAGVEADE KIRSMVNWPRPSDVTELRGFLGLT YY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 837

[Close]
BLAST of Cmc01g0014501 vs. NCBI nr
Match: KAA0055376.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 580.9 bits (1496), Expect = 6.5e-162
Identity = 278/300 (92.67%), Postives = 290/300 (96.67%), Query Frame = 0 

Query: 1   MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNL 60
           M+VET+DTYKTD+KE+GDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLP+Q  
Sbjct: 538 MKVETDDTYKTDEKEEGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDG+IRPSRSPYS+PVLLVK K+GGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLN 657

Query: 121 QATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAA+FSKLDLKSGYHQIRMKEEDIEKT FRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFF DILVYS DI+EHEKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 300
           QLYANHKKCVFAHS+IQYLGHQISKAGVEADE KIRSMVNWPRP DVTELRGFL LT YY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPLDVTELRGFLRLTGYY 837

[Close]
BLAST of Cmc01g0014501 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.9e-57
Identity = 114/283 (40.28%), Postives = 171/283 (60.42%), Query Frame = 0 

Query: 24  MIRFLLQQYTDIFTTP-KGLPPKRDIDHRILTLPNQNLINVRPYKYGHIQKGEIEKLVAE 83
           ++  LL ++  IF  P  G+  +  +   I T   Q+ I  + Y Y    +GE+E+ + E
Sbjct: 87  ILNSLLGEFPRIFEPPLSGMSVETAVKAEIRT-NTQDPIYAKSYPYPVNMRGEVERQIDE 146

Query: 84  MLQDGIIRPSRSPYSNPVLLVKNK-----DGGWRFCVDYRKLNQATVSDKFPIPVIEELL 143
           +LQDGIIRPS SPY++P+ +V  K     +  +R  VD+++LN  T+ D +PIP I   L
Sbjct: 147 LLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATL 206

Query: 144 DELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLM 203
             L  A  F+ LDL SG+HQI MKE DI KT F T  G YEFL +PFGL NAPA FQ ++
Sbjct: 207 ASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMI 266

Query: 204 NQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQ 263
           + + +  + +   V+ DDI+V+S D   H K+L +V A L    L  N +K  F  ++++
Sbjct: 267 DDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVE 326

Query: 264 YLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 301
           +LG+ ++  G++AD  K+R++   P P+ V EL+ FLG+TSYY
Sbjct: 327 FLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYY 368

[Close]
BLAST of Cmc01g0014501 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 219.5 bits (558), Expect = 5.0e-56
Identity = 120/304 (39.47%), Postives = 172/304 (56.58%), Query Frame = 0 

Query: 3   VETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKR------DIDHRILTLP 62
           +++ +   TD   K     +P+  +L Q+Y +I      LPP+        + H I   P
Sbjct: 537 IQSVEPNATDHSNKDTFCTLPV--WLQQKYREIIR--NDLPPRPADINNIPVKHDIEIKP 596

Query: 63  NQNLINVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDY 122
              L  ++PY      + EI K+V ++L +  I PS+SP S+PV+LV  KDG +R CVDY
Sbjct: 597 GARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDY 656

Query: 123 RKLNQATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGH 182
           R LN+AT+SD FP+P I+ LL  +  A IF+ LDL SGYHQI M+ +D  KT F T  G 
Sbjct: 657 RTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGK 716

Query: 183 YEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAV 242
           YE+ VMPFGL NAP+TF   M   F+    R V V+ DDIL++S    EH KHL  V   
Sbjct: 717 YEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLER 776

Query: 243 LRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGL 301
           L++  L    KKC FA    ++LG+ I    +   ++K  ++ ++P P  V + + FLG+
Sbjct: 777 LKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGM 834

[Close]
BLAST of Cmc01g0014501 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 5.0e-56
Identity = 120/304 (39.47%), Postives = 172/304 (56.58%), Query Frame = 0 

Query: 3   VETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKR------DIDHRILTLP 62
           +++ +   TD   K     +P+  +L Q+Y +I      LPP+        + H I   P
Sbjct: 563 IQSVEPNATDHSNKDTFCTLPV--WLQQKYREIIR--NDLPPRPADINNIPVKHDIEIKP 622

Query: 63  NQNLINVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDY 122
              L  ++PY      + EI K+V ++L +  I PS+SP S+PV+LV  KDG +R CVDY
Sbjct: 623 GARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDY 682

Query: 123 RKLNQATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGH 182
           R LN+AT+SD FP+P I+ LL  +  A IF+ LDL SGYHQI M+ +D  KT F T  G 
Sbjct: 683 RTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGK 742

Query: 183 YEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAV 242
           YE+ VMPFGL NAP+TF   M   F+    R V V+ DDIL++S    EH KHL  V   
Sbjct: 743 YEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLER 802

Query: 243 LRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGL 301
           L++  L    KKC FA    ++LG+ I    +   ++K  ++ ++P P  V + + FLG+
Sbjct: 803 LKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGM 860

[Close]
BLAST of Cmc01g0014501 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.5e-56
Identity = 103/254 (40.55%), Postives = 153/254 (60.24%), Query Frame = 0 

Query: 52  ILTLPNQNLINVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGG-- 111
           +L   + + I  + Y      + E+E  V EML  G+IR S SPY++P  +V  K     
Sbjct: 198 VLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASG 257

Query: 112 ---WRFCVDYRKLNQATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIE 171
              +R  +DYRKLN+ T+ D++PIP ++E+L +L     F+ +DL  G+HQI M EE I 
Sbjct: 258 ANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESIS 317

Query: 172 KTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEH 231
           KT F T  GHYE+L MPFGL NAPATFQ  MN + +P L +  LV+ DDI+++S+ ++EH
Sbjct: 318 KTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEH 377

Query: 232 EKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSD 291
              + +VF  L D  L     KC F      +LGH ++  G++ +  K++++V++P P+ 
Sbjct: 378 LNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTK 437

Query: 292 VTELRGFLGLTSYY 301
             E+R FLGLT YY
Sbjct: 438 DKEIRAFLGLTGYY 451

[Close]
BLAST of Cmc01g0014501 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-55
Identity = 113/279 (40.50%), Postives = 158/279 (56.63%), Query Frame = 0 

Query: 28  LLQQYTDI-FTTPKGLPPKRDIDHRILTLPNQNLINVRPYKYGHIQKGEIEKLVAEMLQD 87
           LLQ+Y DI +     L       H I T    NL     Y Y    + E+E  + +ML  
Sbjct: 176 LLQKYHDIQYHEGDKLTFTNQTKHTINT--KHNLPLYSKYSYPQAYEQEVESQIQDMLNQ 235

Query: 88  GIIRPSRSPYSNPVLLVKNKDGG-----WRFCVDYRKLNQATVSDKFPIPVIEELLDELY 147
           GIIR S SPY++P+ +V  K        +R  +DYRKLN+ TV D+ PIP ++E+L +L 
Sbjct: 236 GIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLG 295

Query: 148 GAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVF 207
               F+ +DL  G+HQI M  E + KT F T  GHYE+L MPFGL NAPATFQ  MN + 
Sbjct: 296 RCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDIL 355

Query: 208 KPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGH 267
           +P L +  LV+ DDI+V+S+ + EH + LG+VF  L    L     KC F      +LGH
Sbjct: 356 RPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGH 415

Query: 268 QISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 301
            ++  G++ +  KI ++  +P P+   E++ FLGLT YY
Sbjct: 416 VLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

[Close]
BLAST of Cmc01g0014501 vs. ExPASy TrEMBL
Match: A0A5A7T8C0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00570 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.1e-164
Identity = 284/300 (94.67%), Postives = 290/300 (96.67%), Query Frame = 0 

Query: 1   MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNL 60
           MEVETEDTYKTD+KEKGDEADIPMIRFLLQQYTDIFTTPK LPPKRDIDHRILTLPNQ  
Sbjct: 538 MEVETEDTYKTDEKEKGDEADIPMIRFLLQQYTDIFTTPKDLPPKRDIDHRILTLPNQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYS+PVLLVK KDGGWRFCVDY KLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSSPVLLVKKKDGGWRFCVDYWKLN 657

Query: 121 QATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFL 180
           QATVSDKFPIPVIEELLDELYGAA+FSKLDLKSGYHQIRMKEEDIEKT FRTHEGHYEFL
Sbjct: 658 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDIL YSSDI+EH+KHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILAYSSDITEHKKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 300
            LYANHKKCVFAHSRIQYLGHQISKAGVEADE KIRSMV+WPRPSDVTELRGFLGLT YY
Sbjct: 778 HLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMVDWPRPSDVTELRGFLGLTGYY 837

[Close]
BLAST of Cmc01g0014501 vs. ExPASy TrEMBL
Match: A0A5D3E0Q7 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00130 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.1e-164
Identity = 282/300 (94.00%), Postives = 290/300 (96.67%), Query Frame = 0 

Query: 1   MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNL 60
           MEVE E+ YKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQ  
Sbjct: 293 MEVEVEEIYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQRP 352

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLN 120
           INVRPYKYGH+QKGEIE LVAEMLQDGIIRPSRSPYS+ VLLVK KDGGWRFCVDYRKLN
Sbjct: 353 INVRPYKYGHVQKGEIENLVAEMLQDGIIRPSRSPYSSLVLLVKKKDGGWRFCVDYRKLN 412

Query: 121 QATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFL 180
           QATVSDKFPIPVIEELLDELYGAA+FSKLDLKSGYHQIRMKEEDIEKT FRTHEGHYEFL
Sbjct: 413 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 472

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSD++EHEKHLGM+FAVLRDN
Sbjct: 473 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDLTEHEKHLGMIFAVLRDN 532

Query: 241 QLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 300
           QLYANHKKCVFAHSRIQYLGHQISKAGVEAD+ KIRSMVNWPRPSDVTELRGFLGLT YY
Sbjct: 533 QLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMVNWPRPSDVTELRGFLGLTGYY 592

[Close]
BLAST of Cmc01g0014501 vs. ExPASy TrEMBL
Match: A0A5D3CUL0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00160 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.1e-164
Identity = 282/300 (94.00%), Postives = 290/300 (96.67%), Query Frame = 0 

Query: 1   MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNL 60
           MEVE E+ YKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQ  
Sbjct: 293 MEVEVEEIYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQRP 352

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLN 120
           INVRPYKYGH+QKGEIE LVAEMLQDGIIRPSRSPYS+ VLLVK KDGGWRFCVDYRKLN
Sbjct: 353 INVRPYKYGHVQKGEIENLVAEMLQDGIIRPSRSPYSSLVLLVKKKDGGWRFCVDYRKLN 412

Query: 121 QATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFL 180
           QATVSDKFPIPVIEELLDELYGAA+FSKLDLKSGYHQIRMKEEDIEKT FRTHEGHYEFL
Sbjct: 413 QATVSDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 472

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSD++EHEKHLGM+FAVLRDN
Sbjct: 473 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDLTEHEKHLGMIFAVLRDN 532

Query: 241 QLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 300
           QLYANHKKCVFAHSRIQYLGHQISKAGVEAD+ KIRSMVNWPRPSDVTELRGFLGLT YY
Sbjct: 533 QLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMVNWPRPSDVTELRGFLGLTGYY 592

[Close]
BLAST of Cmc01g0014501 vs. ExPASy TrEMBL
Match: A0A5A7UYM1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002110 PE=4 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 7.4e-164
Identity = 280/300 (93.33%), Postives = 290/300 (96.67%), Query Frame = 0 

Query: 1   MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNL 60
           MEVET+DTYKTD+KE+GDEADIPMIRFLLQQY DIFTTPKGLPPKRDIDHRILTLP+Q  
Sbjct: 538 MEVETDDTYKTDEKEEGDEADIPMIRFLLQQYKDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDG+IRPSRSPYS+PVLLVK KDGGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLN 657

Query: 121 QATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAA+FSKLDLKSGYHQIRMKEED+EKT FRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDVEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYS DI E EKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSRDIIEREKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 300
           QLYANHKKCVFAHS+IQYLGHQISKAGVEADE KIRSMVNWPRPSDVTELRGFLGLT YY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYY 837

[Close]
BLAST of Cmc01g0014501 vs. ExPASy TrEMBL
Match: A0A5A7UM77 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002210 PE=4 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.1e-162
Identity = 278/300 (92.67%), Postives = 290/300 (96.67%), Query Frame = 0 

Query: 1   MEVETEDTYKTDKKEKGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPNQNL 60
           M+VET+DTYKTD+KE+GDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLP+Q  
Sbjct: 538 MKVETDDTYKTDEKEEGDEADIPMIRFLLQQYTDIFTTPKGLPPKRDIDHRILTLPDQKP 597

Query: 61  INVRPYKYGHIQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGWRFCVDYRKLN 120
           INVRPYKYGHIQKGEIEKLVAEMLQDG+IRPSRSPYS+PVLLVK K+GGWRFCVDYRKLN
Sbjct: 598 INVRPYKYGHIQKGEIEKLVAEMLQDGVIRPSRSPYSSPVLLVKKKNGGWRFCVDYRKLN 657

Query: 121 QATVSDKFPIPVIEELLDELYGAAIFSKLDLKSGYHQIRMKEEDIEKTTFRTHEGHYEFL 180
           QAT+SDKFPIPVIEELLDELYGAA+FSKLDLKSGYHQIRMKEEDIEKT FRTHEGHYEFL
Sbjct: 658 QATISDKFPIPVIEELLDELYGAAVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFL 717

Query: 181 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDISEHEKHLGMVFAVLRDN 240
           VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFF DILVYS DI+EHEKHLGMVFAVLRDN
Sbjct: 718 VMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFYDILVYSRDITEHEKHLGMVFAVLRDN 777

Query: 241 QLYANHKKCVFAHSRIQYLGHQISKAGVEADEYKIRSMVNWPRPSDVTELRGFLGLTSYY 300
           QLYANHKKCVFAHS+IQYLGHQISKAGVEADE KIRSMVNWPRP DVTELRGFL LT YY
Sbjct: 778 QLYANHKKCVFAHSKIQYLGHQISKAGVEADEDKIRSMVNWPRPLDVTELRGFLRLTGYY 837

[Close]
BLAST of Cmc01g0014501 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-18
Identity = 42/74 (56.76%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 229 HLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQ--ISKAGVEADEYKIRSMVNWPRPSD 288
           HLGMV  +   +Q YAN KKC F   +I YLGH+  IS  GV AD  K+ +MV WP P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 289 VTELRGFLGLTSYY 301
            TELRGFLGLT YY
Sbjct: 63  TTELRGFLGLTGYY 76

[Close]
BLAST of Cmc01g0014501 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.7e-06
Identity = 21/40 (52.50%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 71  IQKGEIEKLVAEMLQDGIIRPSRSPYSNPVLLVKNKDGGW 111
           +++  ++  + EML+  II+PS SPYS+PVLLV+ KDGGW
Sbjct: 40  LRRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:
BLAST of Cmc01g0014501 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0039128.12.4e-16494.67Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26985.1 Ty3/gyp... [more]
TYK14624.12.4e-16494.00uncharacterized protein E5676_scaffold1275G00160 [Cucumis melo var. makuwa][more]
TYK29308.12.4e-16494.00Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa][more]
KAA0061073.11.5e-16393.33Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0055376.16.5e-16292.67Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of Cmc01g0014501 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8I7P95.9e-5740.28Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
Q993155.0e-5639.47Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q7LHG55.0e-5639.47Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
P208256.5e-5640.55Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
P043231.4e-5540.50Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
BLAST of Cmc01g0014501 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T8C01.1e-16494.67Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3E0Q71.1e-16494.00Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A5D3CUL01.1e-16494.00Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7UYM17.4e-16493.33Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7UM773.1e-16292.67Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of Cmc01g0014501 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.11.9e-1856.76DNA/RNA polymerases superfamily protein [more]
ATMG00850.11.7e-0652.50DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 128..263
e-value: 3.3E-88
score: 296.5
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 104..263
e-value: 1.9E-31
score: 109.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 84..263
score: 15.066315
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 48..188
e-value: 3.3E-88
score: 296.5
NoneNo IPR availablePANTHERPTHR24559:SF319SUBFAMILY NOT NAMEDcoord: 7..214
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 7..214
NoneNo IPR availableCDDcd01647RT_LTRcoord: 87..261
e-value: 3.93504E-96
score: 279.095
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 29..300

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0014501.1Cmc01g0014501.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding