Cmc01g0014391 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCCAAATGTAAAGGGTTTCCTAGCACCCTACAAAGACCAACGCTACCACTTGTAGGAATGGCGTGGCGCTGAAAATGCACCTTCAATGTCAAAAGAGGTCTTTGGAGTTTGGAGTTGAATGTACTATGTATTTGTATTGTAACCGTGGAGAAATTAATGACAATAATATGTTTGCATTTGATTTATAGCATGTCAACTACATCGAGACTACCTAAGCAAAGTTAGACGAAAGAGGAAGAGGCAGGCCTCATCGAGTTAGTAAATGTTGGTGGCTGGAGTTCGACAACGGCAACTTTCGCCTCGGGTACCTAAATTAGCTGGCGAGAATGATGACCTTCAAGATCTTGGGTTGTAACATCCATGCTTCAACGATTGATAGCCAAATAAAATTGTTGAAGAGAACGTTCTATGCGCTAGCCGAGATGTGTGGCTCAACCTGTAGTGGGTTTGGGTGGAATGATGAACAAAAGTGCATCGTCATAGAGAAAGAAGTGTTTGAGGATTGGGTCAAGGTGCGTTATTAG CCCAAATGTAAAGGGTTTCCTAGCACCCTACAAAGACCAACGCTACCACTTGTAGGAATGGCGTGGCGCTGAAAATGCACCTTCAATGTCAAAAGAGCATGTCAACTACATCGAGACTACCTAAGCAAAGTTAGACGAAAGAGGAAGAGGCAGGCCTCATCGAGTTAGTAAATGTTGGTGGCTGGAGTTCGACAACGGCAACTTTCGCCTCGGGTACCTAAATTAGCTGGCGAGAATGATGACCTTCAAGATCTTGGGTTGTAACATCCATGCTTCAACGATTGATAGCCAAATAAAATTGTTGAAGAGAACGTTCTATGCGCTAGCCGAGATGTGTGGCTCAACCTGTAGTGGGTTTGGGTGGAATGATGAACAAAAGTGCATCGTCATAGAGAAAGAAGTGTTTGAGGATTGGGTCAAGGTGCGTTATTAG ATGATGACCTTCAAGATCTTGGGTTGTAACATCCATGCTTCAACGATTGATAGCCAAATAAAATTGTTGAAGAGAACGTTCTATGCGCTAGCCGAGATGTGTGGCTCAACCTGTAGTGGGTTTGGGTGGAATGATGAACAAAAGTGCATCGTCATAGAGAAAGAAGTGTTTGAGGATTGGGTCAAGGTGCGTTATTAG MMTFKILGCNIHASTIDSQIKLLKRTFYALAEMCGSTCSGFGWNDEQKCIVIEKEVFEDWVKVRY Homology
BLAST of Cmc01g0014391 vs. NCBI nr
Match: KAA0042271.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 119.4 bits (298), Expect = 1.2e-23 Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Cmc01g0014391 vs. NCBI nr
Match: TYK26918.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 117.9 bits (294), Expect = 3.4e-23 Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Cmc01g0014391 vs. NCBI nr
Match: KAA0026116.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 117.1 bits (292), Expect = 5.7e-23 Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 0
BLAST of Cmc01g0014391 vs. NCBI nr
Match: KAA0043325.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK02658.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 115.9 bits (289), Expect = 1.3e-22 Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of Cmc01g0014391 vs. NCBI nr
Match: TYK15304.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 115.2 bits (287), Expect = 2.2e-22 Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0
BLAST of Cmc01g0014391 vs. ExPASy TrEMBL
Match: A0A5A7TL11 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00550 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 5.6e-24 Identity = 54/65 (83.08%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Cmc01g0014391 vs. ExPASy TrEMBL
Match: A0A5D3DTP5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold699G00270 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.6e-23 Identity = 53/65 (81.54%), Postives = 56/65 (86.15%), Query Frame = 0
BLAST of Cmc01g0014391 vs. ExPASy TrEMBL
Match: A0A5A7SJZ2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00580 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 2.8e-23 Identity = 52/65 (80.00%), Postives = 58/65 (89.23%), Query Frame = 0
BLAST of Cmc01g0014391 vs. ExPASy TrEMBL
Match: A0A5A7TPI5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1734G00020 PE=4 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 6.2e-23 Identity = 52/65 (80.00%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of Cmc01g0014391 vs. ExPASy TrEMBL
Match: A0A5D3CWJ7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1706G00110 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22 Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
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