Cmc01g0010511 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0010511
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr01: 5518629 .. 5520737 (+)
RNA-Seq Expression	Cmc01g0010511
Synteny	Cmc01g0010511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGTGCAAACTGCAGTTTATTTTGAATTATGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGTGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATCATGTTTATTTGTAGGCTACCGCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAATTACTGAACCTTCAACAAGAATTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGCCGGTTCATCTATTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACCGAAACCTTAATTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCAGTCTGGGATCTTGTAGATCAACCTGATGAGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACTCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACATGTTGCCATGTTAAAGTCTATTCGAATACTTTTATCCATTGCTGCATATTTTGACTATGAGATTTGACAAATGGATGTAAAGACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACATTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTCTGTACGTAGATGATATCCTACTCATTAAGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAGTTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAACACTAGCTTTGTCTCAAGCATCATATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGATTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACATGCCTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTTTAGGAAATCTACTTCAGGTTCAGTGTTCACTCTTAGCGGAGGAGCTGTAGTTTGAAGAAGTATCAAGCAAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTATGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAAATCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGCGGGGCTGTGGCTAATTCTAGGGAGCCTAGAAGCCACAAGCTTGGAAAGCATATTAAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGGTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTAGGTCTACGTGACATGCCACATTTAATCTAG

mRNA sequence

ATGCAGTGCAAACTGCAGTTTATTTTGAATTATGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGTGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATCATGTTTATTTGTAGGCTACCGCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAATTACTGAACCTTCAACAAGAATTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGCCGGTTCATCTATTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACCGAAACCTTAATTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCAGTCTGGGATCTTGTAGATCAACCTGATGAGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACTCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACATACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACATTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTCTGTACGTAGATGATATCCTACTCATTAAGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAGTTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAACACTAGCTTTGTCTCAAGCATCATATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGATTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACATGCCTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTTTAGGAAATCTACTTCAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTATGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAAATCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGCGGGGCTGTGGCTAATTCTAGGGAGCCTAGAAGCCACAAGCTTGGAAAGCATATTAAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGGTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTAGGTCTACGTGACATGCCACATTTAATCTAG

Coding sequence (CDS)

ATGCAGTGCAAACTGCAGTTTATTTTGAATTATGTTCCATCTAAAAGTGTTTCTGAAACACCTTTAAAATTATGGAATGGTCGTAAAGGTAGTTTACGTCATTTCAGAATTTGGTGTTGTCCAGCACACGTGCTTGAGAATAACCCTAAGAAATTGGAACCTCGTTCAAAATCATGTTTATTTGTAGGCTACCGCAAAGGAACTAGAGGTGGTTACTTCTATGATCCTAAAGATAATAAAGTGTTTGTATCGACAAATGCTACATTTTTAGAAGAGGACCACATAAGGGAGCACAAACCGCGTAGTAAGATAGTATTAAATGAACTTTCCAAAGAAATTACTGAACCTTCAACAAGAATTGTTGAAGAGCCTAGTGCATTAACAAGAGTTGTTCATGCCGGTTCATCTATTAGGACACATCAACCTCAATCGTTGAGGGAACCTCGACGAAGTGGGAGGGTTACAAACTTACCTATTCGTTATATGAGTTTAACCGAAACCTTAATTGTCATATCTGATGGCGACATTGAGGATCCATTGACTTTTAAGAAGGCAATGGAGGATGTGGATAAAGATGAATGGATCAAAGCTATGAATCTTGAATTGGAGTCTATGTACTTCAATTCAGTCTGGGATCTTGTAGATCAACCTGATGAGGTAAAACCTATAGGTTGTAAATGGATCTACAAGAGAAAAAGAGGTGCAGATGGTAAGGTACAAACTTTTAAAGCTAGACTAGTGGCAAAGGGTTATACTCAAGTTGAGGGAGTTGACTATGAGGAGACTTTCTCACATACTGCCTTTTTGAATGGCAATCTTGAGGAGACCATCTATATGCAACAACCAGAAGGATTCATAATTCCAGGTCAAGAGCAAAAGATTTGCAAGCTTAATCGTTCTATTTATGGATTAAAACAAGCTTCTCGATCTTGGAACATAAGATTTGATACCGCAATAAAATCTTATGGATTTGATCAAATCGTTGATGAACATTGTGTCTACAAAAGAATCATCAACAAATCAGTAGCTTTCTTAGTTCTGTACGTAGATGATATCCTACTCATTAAGAATGATATAGGTTTACTAACTGACATCAAACAATGGCTAGCAACCCAATTTCAAATGAAAGATTTGGGAGAGGCACAGTTTGTTCTGGGTATTCAGATCTTTAGAGATCGTAAGAACAAAACACTAGCTTTGTCTCAAGCATCATATATTGACAAAATAGTTGTTAAATATTCAATGCAAAACTCCAAGAGAGGCTTACTACCTTTCAGGCATGGAGTTACTTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGACGTTGAGGAAATGAGACATATCCCCTATGCATCAGCTGTTGGCAGCTTGATGTATGCGATGTTATGTACTAGACCTGACATCTGTTATGCGGTGGGGATAGTCAGTAGATATCAATCTAATCCAGGATTAGCTCATTGGATTGCCGTTAAAACTATCCTCAAGTATCTTAGGAGAACGAGGGACTACATGCCTGTGTATGGTTCTAAGGATTTGATTCTTACAGGATACACAGACTCTGACTTTCAGACTGATAGAGATTTTAGGAAATCTACTTCAGGATGTATTGCTGACTCCACTATGGAGGCAGAGTATGTTGCAGCTTGTGAAGCTGCCAAAGAGGCTGTTTGGCTTAGAAAAATCTTGATTGATTTGGAAGTAGTTCCAAACATGTCAAAGCCAATTACTCTTTACTGTGATAATAGCGGGGCTGTGGCTAATTCTAGGGAGCCTAGAAGCCACAAGCTTGGAAAGCATATTAAGCGCAAGTATCACTTGATTCGAGAGATAGTGCATCGAGGGGACGTGATCGTCACACAGATAGCTTCGACACACAATGGTGCTGATCCGTTTACAAAGCCCCTCACGGCTAAGGTGTTTGAGGGTCACCTAGAGAGTCTAGGTCTACGTGACATGCCACATTTAATCTAG

Protein sequence

MQCKLQFILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSALTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFSHTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIINKSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYTDSDFQTDRDFRKSTSGCIADSTMEAEYVAACEAAKEAVWLRKILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQIASTHNGADPFTKPLTAKVFEGHLESLGLRDMPHLI

Homology

[Close]

BLAST of Cmc01g0010511 vs. NCBI nr
Match: TYJ97618.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 626/695 (90.07%), Postives = 629/695 (90.50%), Query Frame = 0


Query: 7    FILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRK 66
            +ILN VPSKSVSETPLKLWNGRKGSLRHFRIW CPAHVLENNPKKLEPRSK CLFVGY K
Sbjct: 433  YILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 492

Query: 67   GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSA 126
            GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE TEPSTR+VEEPSA
Sbjct: 493  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 552

Query: 127  LTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAM 186
            LTRVVH GSS RTHQPQSLREPRRSGRVTNLPIRYMSLTETL VISDGDIEDPLTFKKAM
Sbjct: 553  LTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 612

Query: 187  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARL 246
            EDVDKDEWIKAMNLELESMYFNSVWDLVDQPD VKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 613  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 672

Query: 247  VAKGYTQVEGVDYEETFS---------------------------HTAFLNGNLEETIYM 306
            VAKGYTQVEGVDYEETFS                            TAFLNGNLEETIYM
Sbjct: 673  VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYM 732

Query: 307  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIIN 366
            QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDE CVYKRIIN
Sbjct: 733  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN 792

Query: 367  KSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLA 426
            KSVAFLVLYVDDILLI NDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNK LA
Sbjct: 793  KSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLA 852

Query: 427  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 486
            LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM
Sbjct: 853  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 912

Query: 487  YAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYT 546
            YAMLCTRPDICYAVGIVSRYQSNPGLAHW AVKTILKYLRRTRDY  VYGSKDLILTGYT
Sbjct: 913  YAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYT 972

Query: 547  DSDFQTDRDFRKSTS------------------GCIADSTMEAEYVAACEAAKEAVWLRK 606
            DSDFQTDRD RKSTS                  GCIADSTMEAEYVAACEAAKEAVWLR 
Sbjct: 973  DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRN 1032

Query: 607  ILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQ 657
             LIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK GKHI+RKYHLIREIVHRGDVIVTQ
Sbjct: 1033 FLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ 1092

[Close]

BLAST of Cmc01g0010511 vs. NCBI nr
Match: KAA0048404.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 626/695 (90.07%), Postives = 629/695 (90.50%), Query Frame = 0


Query: 7    FILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRK 66
            +ILN VPSKSVSETPLKLWNGRKGSLRHFRIW CPAHVLENNPKKLEPRSK CLFVGY K
Sbjct: 647  YILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 706

Query: 67   GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSA 126
            GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE TEPSTR+VEEPSA
Sbjct: 707  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 766

Query: 127  LTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAM 186
            LTRVVH GSS RTHQPQSLREPRRSGRVTNLPIRYMSLTETL VISDGDIEDPLTFKKAM
Sbjct: 767  LTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 826

Query: 187  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARL 246
            EDVDKDEWIKAMNLELESMYFNSVWDLVDQPD VKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 827  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 886

Query: 247  VAKGYTQVEGVDYEETFS---------------------------HTAFLNGNLEETIYM 306
            VAKGYTQVEGVDYEETFS                            TAFLNGNLEETIYM
Sbjct: 887  VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYM 946

Query: 307  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIIN 366
            QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDE CVYKRIIN
Sbjct: 947  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN 1006

Query: 367  KSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLA 426
            KSVAFLVLYVDDILLI NDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNK LA
Sbjct: 1007 KSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLA 1066

Query: 427  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 486
            LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM
Sbjct: 1067 LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 1126

Query: 487  YAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYT 546
            YAMLCTRPDICYAVGIVSRYQSNPGLAHW AVKTILKYLRRTRDY  VYGSKDLILTGYT
Sbjct: 1127 YAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYT 1186

Query: 547  DSDFQTDRDFRKSTS------------------GCIADSTMEAEYVAACEAAKEAVWLRK 606
            DSDFQTDRD RKSTS                  GCIADSTMEAEYVAACEAAKEAVWLR 
Sbjct: 1187 DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRN 1246

Query: 607  ILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQ 657
             LIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK GKHI+RKYHLIREIVHRGDVIVTQ
Sbjct: 1247 FLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ 1306

[Close]

BLAST of Cmc01g0010511 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 626/695 (90.07%), Postives = 629/695 (90.50%), Query Frame = 0


Query: 7    FILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRK 66
            +ILN VPSKSVSETPLKLWNGRKGSLRHFRIW CPAHVLENNPKKLEPRSK CLFVGY K
Sbjct: 648  YILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 707

Query: 67   GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSA 126
            GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE TEPSTR+VEEPSA
Sbjct: 708  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 767

Query: 127  LTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAM 186
            LTRVVH GSS RTHQPQSLREPRRSGRVTNLPIRYMSLTETL VISDGDIEDPLTFKKAM
Sbjct: 768  LTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 827

Query: 187  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARL 246
            EDVDKDEWIKAMNLELESMYFNSVWDLVDQPD VKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 828  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 887

Query: 247  VAKGYTQVEGVDYEETFS---------------------------HTAFLNGNLEETIYM 306
            VAKGYTQVEGVDYEETFS                            TAFLNGNLEETIYM
Sbjct: 888  VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYM 947

Query: 307  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIIN 366
            QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDE CVYKRIIN
Sbjct: 948  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN 1007

Query: 367  KSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLA 426
            KSVAFLVLYVDDILLI NDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNK LA
Sbjct: 1008 KSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLA 1067

Query: 427  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 486
            LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM
Sbjct: 1068 LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 1127

Query: 487  YAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYT 546
            YAMLCTRPDICYAVGIVSRYQSNPGLAHW AVKTILKYLRRTRDY  VYGSKDLILTGYT
Sbjct: 1128 YAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYT 1187

Query: 547  DSDFQTDRDFRKSTS------------------GCIADSTMEAEYVAACEAAKEAVWLRK 606
            DSDFQTDRD RKSTS                  GCIADSTMEAEYVAACEAAKEAVWLR 
Sbjct: 1188 DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRN 1247

Query: 607  ILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQ 657
             LIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK GKHI+RKYHLIREIVHRGDVIVTQ
Sbjct: 1248 FLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ 1307

[Close]

BLAST of Cmc01g0010511 vs. NCBI nr
Match: KAA0031826.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0039313.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0043789.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0048789.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 626/695 (90.07%), Postives = 629/695 (90.50%), Query Frame = 0


Query: 7    FILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRK 66
            +ILN VPSKSVSETPLKLWNGRKGSLRHFRIW CPAHVLENNPKKLEPRSK CLFVGY K
Sbjct: 648  YILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 707

Query: 67   GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSA 126
            GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE TEPSTR+VEEPSA
Sbjct: 708  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 767

Query: 127  LTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAM 186
            LTRVVH GSS RTHQPQSLREPRRSGRVTNLPIRYMSLTETL VISDGDIEDPLTFKKAM
Sbjct: 768  LTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 827

Query: 187  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARL 246
            EDVDKDEWIKAMNLELESMYFNSVWDLVDQPD VKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 828  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 887

Query: 247  VAKGYTQVEGVDYEETFS---------------------------HTAFLNGNLEETIYM 306
            VAKGYTQVEGVDYEETFS                            TAFLNGNLEETIYM
Sbjct: 888  VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYM 947

Query: 307  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIIN 366
            QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDE CVYKRIIN
Sbjct: 948  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN 1007

Query: 367  KSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLA 426
            KSVAFLVLYVDDILLI NDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNK LA
Sbjct: 1008 KSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLA 1067

Query: 427  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 486
            LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM
Sbjct: 1068 LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 1127

Query: 487  YAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYT 546
            YAMLCTRPDICYAVGIVSRYQSNPGLAHW AVKTILKYLRRTRDY  VYGSKDLILTGYT
Sbjct: 1128 YAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYT 1187

Query: 547  DSDFQTDRDFRKSTS------------------GCIADSTMEAEYVAACEAAKEAVWLRK 606
            DSDFQTDRD RKSTS                  GCIADSTMEAEYVAACEAAKEAVWLR 
Sbjct: 1188 DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRN 1247

Query: 607  ILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQ 657
             LIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK GKHI+RKYHLIREIVHRGDVIVTQ
Sbjct: 1248 FLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ 1307

[Close]

BLAST of Cmc01g0010511 vs. NCBI nr
Match: KAA0026233.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1232.6 bits (3188), Expect = 0.0e+00
Identity = 623/695 (89.64%), Postives = 626/695 (90.07%), Query Frame = 0


Query: 7    FILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRK 66
            +ILN VPSKSVSETPLKLWNG KGSLRHFRIW CPAHVLENNPKKLEPRSK CLFVGY K
Sbjct: 507  YILNCVPSKSVSETPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 566

Query: 67   GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSA 126
            GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE TEPSTR+VEEPSA
Sbjct: 567  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 626

Query: 127  LTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAM 186
            L RVVH  SS RTHQPQSLREPRRSGRVTNLPIRYMSLTETL VISDGDIEDPLTFKKAM
Sbjct: 627  LIRVVHVRSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 686

Query: 187  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARL 246
            EDVDKDEWIKAMNLELESMYFNSVWDLVDQPD VKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 687  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 746

Query: 247  VAKGYTQVEGVDYEETFS---------------------------HTAFLNGNLEETIYM 306
            VAKGYTQVEGVDYEETFS                            TAFLNGNLEETIYM
Sbjct: 747  VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYM 806

Query: 307  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIIN 366
            QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDE CVYKRIIN
Sbjct: 807  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN 866

Query: 367  KSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLA 426
            KSVAFLVLYVDDILLI NDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNK LA
Sbjct: 867  KSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLA 926

Query: 427  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 486
            LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM
Sbjct: 927  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 986

Query: 487  YAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYT 546
            YAMLCTRPDICYAVGIVSRYQSNPGLAHW AVKTILKYLRRTRDY  VYGSKDLILTGYT
Sbjct: 987  YAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYT 1046

Query: 547  DSDFQTDRDFRKSTS------------------GCIADSTMEAEYVAACEAAKEAVWLRK 606
            DSDFQTDRD RKSTS                  GCIADSTMEAEYVAACEAAKEAVWLR 
Sbjct: 1047 DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRN 1106

Query: 607  ILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQ 657
             LIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK GKHI+RKYHLIREIVHRGDVIVTQ
Sbjct: 1107 FLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ 1166

[Close]

BLAST of Cmc01g0010511 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 3.3e-121
Identity = 264/720 (36.67%), Postives = 388/720 (53.89%), Query Frame = 0


Query: 7    FILNYVPSKSVS-ETPLKLWNGRKGSLRHFRIWCCP--AHVLENNPKKLEPRSKSCLFVG 66
            +++N  PS  ++ E P ++W  ++ S  H +++ C   AHV +    KL+ +S  C+F+G
Sbjct: 619  YLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQRTKLDDKSIPCIFIG 678

Query: 67   YRKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE-ITEPST---- 126
            Y     G   +DP   KV  S +  F  E  +R     S+ V N +    +T PST    
Sbjct: 679  YGDEEFGYRLWDPVKKKVIRSRDVVF-RESEVRTAADMSEKVKNGIIPNFVTIPSTSNNP 738

Query: 127  ------------------RIVEEPSAL----TRVVHAGSSIRTHQPQSLREPRRSGRVTN 186
                               ++E+   L      V H       HQP      RRS R   
Sbjct: 739  TSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL-----RRSERPRV 798

Query: 187  LPIRYMSLTETLIVISDGDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQ 246
               RY S    LI     D  +P + K+ +   +K++ +KAM  E+ES+  N  + LV+ 
Sbjct: 799  ESRRYPSTEYVLI----SDDREPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVEL 858

Query: 247  PDEVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQVEGVDYEETFS------------ 306
            P   +P+ CKW++K K+  D K+  +KARLV KG+ Q +G+D++E FS            
Sbjct: 859  PKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTIL 918

Query: 307  ---------------HTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASR 366
                            TAFL+G+LEE IYM+QPEGF + G++  +CKLN+S+YGLKQA R
Sbjct: 919  SLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPR 978

Query: 367  SWNIRFDTAIKSYGFDQIVDEHCVY-KRIINKSVAFLVLYVDDILLIKNDIGLLTDIKQW 426
             W ++FD+ +KS  + +   + CVY KR    +   L+LYVDD+L++  D GL+  +K  
Sbjct: 979  QWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGD 1038

Query: 427  LATQFQMKDLGEAQFVLGIQIFRDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHG 486
            L+  F MKDLG AQ +LG++I R+R ++ L LSQ  YI++++ +++M+N+K    P    
Sbjct: 1039 LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1098

Query: 487  VTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHW 546
            + LSK+ CP T ++   M  +PY+SAVGSLMYAM+CTRPDI +AVG+VSR+  NPG  HW
Sbjct: 1099 LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHW 1158

Query: 547  IAVKTILKYLRRTRDYMPVYGSKDLILTGYTDSDFQTDRDFRKSTSG------------- 606
             AVK IL+YLR T      +G  D IL GYTD+D   D D RKS++G             
Sbjct: 1159 EAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQ 1218

Query: 607  -----CIADSTMEAEYVAACEAAKEAVWLRKILIDLEVVPNMSKPITLYCDNSGAVANSR 651
                 C+A ST EAEY+AA E  KE +WL++ L +L +     K   +YCD+  A+  S+
Sbjct: 1219 SKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL---HQKEYVVYCDSQSAIDLSK 1278

[Close]

BLAST of Cmc01g0010511 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 283.5 bits (724), Expect = 6.1e-75
Identity = 204/657 (31.05%), Postives = 320/657 (48.71%), Query Frame = 0


Query: 56   SKSCLFVGYRKGTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITE 115
            SK C  + + K ++       + NK F++ +     +DH+ E            SK    
Sbjct: 784  SKECDNIQFLKDSK-------ESNKYFLNESKKRKRDDHLNE------------SKGSGN 843

Query: 116  PSTRIVEEPSALTRVVHAGSSIRTHQPQSLREPRRSGRVTNLP-IRYMSLTETL--IVIS 175
            P+     E +   + +   +  +    + +   RRS R+   P I Y     +L  +V++
Sbjct: 844  PNESRESETAEHLKEIGIDNPTKNDGIEIIN--RRSERLKTKPQISYNEEDNSLNKVVLN 903

Query: 176  DGDI--EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYK 235
               I  + P +F +     DK  W +A+N EL +   N+ W +  +P+    +  +W++ 
Sbjct: 904  AHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFS 963

Query: 236  RKRGADGKVQTFKARLVAKGYTQVEGVDYEETFS-------------------------- 295
             K    G    +KARLVA+G+TQ   +DYEETF+                          
Sbjct: 964  VKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMD 1023

Query: 296  -HTAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYG 355
              TAFLNG L+E IYM+ P+G  I      +CKLN++IYGLKQA+R W   F+ A+K   
Sbjct: 1024 VKTAFLNGTLKEEIYMRLPQG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECE 1083

Query: 356  FDQIVDEHCVY---KRIINKSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGE 415
            F     + C+Y   K  IN+++ +++LYVDD+++   D+  + + K++L  +F+M DL E
Sbjct: 1084 FVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNE 1143

Query: 416  AQFVLGIQIFRDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLP----FRHGVTLSKEQC 475
             +  +GI+I  + +   + LSQ++Y+ KI+ K++M+N      P      + +  S E C
Sbjct: 1144 IKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDC 1203

Query: 476  PKTPQDVEEMRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILK 535
                       + P  S +G LMY MLCTRPD+  AV I+SRY S      W  +K +L+
Sbjct: 1204 -----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLR 1263

Query: 536  YLRRTRDYMPVYGSKDLI----LTGYTDSDFQTDRDFRKSTSG----------------- 595
            YL+ T D M +   K+L     + GY DSD+      RKST+G                 
Sbjct: 1264 YLKGTID-MKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKR 1323

Query: 596  --CIADSTMEAEYVAACEAAKEAVWLRKILIDLEVVPNMSKPITLYCDNSGAVANSREPR 651
               +A S+ EAEY+A  EA +EA+WL+ +L  + +   +  PI +Y DN G ++ +  P 
Sbjct: 1324 QNSVAASSTEAEYMALFEAVREALWLKFLLTSINI--KLENPIKIYEDNQGCISIANNPS 1383

[Close]

BLAST of Cmc01g0010511 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.0e-69
Identity = 170/524 (32.44%), Postives = 254/524 (48.47%), Query Frame = 0


Query: 178  DPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDEVKPIGCKWIYKRKRGAD 237
            +P T  +AM+D   D W +AM  E+ +   N  WDLV   P  V  +GC+WI+ +K  +D
Sbjct: 938  EPRTAIQAMKD---DRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSD 997

Query: 238  GKVQTFKARLVAKGYTQVEGVDYEETFS---------------------------HTAFL 297
            G +  +KARLVAKGY Q  G+DY ETFS                           + AFL
Sbjct: 998  GSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFL 1057

Query: 298  NGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVD 357
             G L + +YM QP GF+   +   +C+L ++IYGLKQA R+W +   T + + GF   + 
Sbjct: 1058 QGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSIS 1117

Query: 358  EHCVYKRIINKSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQI 417
            +  ++     +S+ ++++YVDDIL+  ND  LL      L+ +F +K+  +  + LGI+ 
Sbjct: 1118 DTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIE- 1177

Query: 418  FRDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHI 477
               R  + L LSQ  Y   ++ + +M  +K    P      L+     K P   E     
Sbjct: 1178 -AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTE----- 1237

Query: 478  PYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDY-MPVY 537
             Y   VGSL Y +  TRPD+ YAV  +S+Y   P   HW A+K +L+YL  T D+ + + 
Sbjct: 1238 -YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1297

Query: 538  GSKDLILTGYTDSDFQTDRDFRKSTSGCI------------------ADSTMEAEYVAAC 597
                L L  Y+D+D+  D D   ST+G I                    S+ EAEY +  
Sbjct: 1298 KGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVA 1357

Query: 598  EAAKEAVWLRKILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIRE 655
              + E  W+  +L +L +   +S P  +YCDN GA      P  H   KHI   YH IR 
Sbjct: 1358 NTSSELQWICSLLTELGI--QLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRN 1417

[Close]

BLAST of Cmc01g0010511 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.6e-67
Identity = 185/588 (31.46%), Postives = 281/588 (47.79%), Query Frame = 0


Query: 116  PSTRIVEEPSALTRVVHAGSS--IRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISD 175
            P + ++  P  L ++V+  +   + TH   S+    ++G +   P +Y SL  +L   S 
Sbjct: 901  PPSILIHPPPPLAQIVNNNNQAPLNTH---SMGTRAKAGIIKPNP-KY-SLAVSLAAES- 960

Query: 176  GDIEDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLV-DQPDEVKPIGCKWIYKRK 235
                +P T  +A++D   + W  AM  E+ +   N  WDLV   P  V  +GC+WI+ +K
Sbjct: 961  ----EPRTAIQALKD---ERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKK 1020

Query: 236  RGADGKVQTFKARLVAKGYTQVEGVDYEETFS---------------------------H 295
              +DG +  +KARLVAKGY Q  G+DY ETFS                           +
Sbjct: 1021 YNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVN 1080

Query: 296  TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 355
             AFL G L + +YM QP GFI   +   +CKL +++YGLKQA R+W +     + + GF 
Sbjct: 1081 NAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFV 1140

Query: 356  QIVDEHCVYKRIINKSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVL 415
              V +  ++     KS+ ++++YVDDIL+  ND  LL +    L+ +F +KD  E  + L
Sbjct: 1141 NSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFL 1200

Query: 416  GIQIFRDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEE 475
            GI+    R    L LSQ  YI  ++ + +M  +K    P      LS     K     E 
Sbjct: 1201 GIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTE- 1260

Query: 476  MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDY- 535
                 Y   VGSL Y +  TRPDI YAV  +S++   P   H  A+K IL+YL  T ++ 
Sbjct: 1261 -----YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHG 1320

Query: 536  MPVYGSKDLILTGYTDSDFQTDRDFRKSTSGCI------------------ADSTMEAEY 595
            + +     L L  Y+D+D+  D+D   ST+G I                    S+ EAEY
Sbjct: 1321 IFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEY 1380

Query: 596  VAACEAAKEAVWLRKILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYH 655
             +    + E  W+  +L +L +   +++P  +YCDN GA      P  H   KHI   YH
Sbjct: 1381 RSVANTSSEMQWICSLLTELGI--RLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYH 1440

[Close]

BLAST of Cmc01g0010511 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 134.8 bits (338), Expect = 3.5e-30
Identity = 95/310 (30.65%), Postives = 138/310 (44.52%), Query Frame = 0


Query: 266 TAFLNGNLEETIYMQQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 325
           TAFLN  ++E IY++QP GF+       + +L   +YGLKQA   WN   +  +K  GF 
Sbjct: 5   TAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKKIGFC 64

Query: 326 QIVDEHCVYKRIINKSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVL 385
           +   EH +Y R  +    ++ +YVDD+L+      +   +KQ L   + MKDLG+    L
Sbjct: 65  RHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFL 124

Query: 386 GIQIFRDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEE 445
           G+ I +   N  + LS   YI K   +  +   K    P  +   L +   P   +D+  
Sbjct: 125 GLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHL-KDI-- 184

Query: 446 MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYM 505
               PY S VG L++     RPDI Y V ++SR+   P   H  + + +L+YL  TR   
Sbjct: 185 ---TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMC 244

Query: 506 PVYGS-KDLILTGYTDSDFQTDRDFRKST-------------------SGCIADSTMEAE 556
             Y S   L LT Y D+      D   ST                    G I   + EAE
Sbjct: 245 LKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAE 304

[Close]

BLAST of Cmc01g0010511 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 626/695 (90.07%), Postives = 629/695 (90.50%), Query Frame = 0


Query: 7    FILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRK 66
            +ILN VPSKSVSETPLKLWNGRKGSLRHFRIW CPAHVLENNPKKLEPRSK CLFVGY K
Sbjct: 648  YILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 707

Query: 67   GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSA 126
            GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE TEPSTR+VEEPSA
Sbjct: 708  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 767

Query: 127  LTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAM 186
            LTRVVH GSS RTHQPQSLREPRRSGRVTNLPIRYMSLTETL VISDGDIEDPLTFKKAM
Sbjct: 768  LTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 827

Query: 187  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARL 246
            EDVDKDEWIKAMNLELESMYFNSVWDLVDQPD VKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 828  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 887

Query: 247  VAKGYTQVEGVDYEETFS---------------------------HTAFLNGNLEETIYM 306
            VAKGYTQVEGVDYEETFS                            TAFLNGNLEETIYM
Sbjct: 888  VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYM 947

Query: 307  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIIN 366
            QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDE CVYKRIIN
Sbjct: 948  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN 1007

Query: 367  KSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLA 426
            KSVAFLVLYVDDILLI NDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNK LA
Sbjct: 1008 KSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLA 1067

Query: 427  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 486
            LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM
Sbjct: 1068 LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 1127

Query: 487  YAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYT 546
            YAMLCTRPDICYAVGIVSRYQSNPGLAHW AVKTILKYLRRTRDY  VYGSKDLILTGYT
Sbjct: 1128 YAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYT 1187

Query: 547  DSDFQTDRDFRKSTS------------------GCIADSTMEAEYVAACEAAKEAVWLRK 606
            DSDFQTDRD RKSTS                  GCIADSTMEAEYVAACEAAKEAVWLR 
Sbjct: 1188 DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRN 1247

Query: 607  ILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQ 657
             LIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK GKHI+RKYHLIREIVHRGDVIVTQ
Sbjct: 1248 FLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ 1307

[Close]

BLAST of Cmc01g0010511 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 626/695 (90.07%), Postives = 629/695 (90.50%), Query Frame = 0


Query: 7    FILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRK 66
            +ILN VPSKSVSETPLKLWNGRKGSLRHFRIW CPAHVLENNPKKLEPRSK CLFVGY K
Sbjct: 648  YILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 707

Query: 67   GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSA 126
            GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE TEPSTR+VEEPSA
Sbjct: 708  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 767

Query: 127  LTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAM 186
            LTRVVH GSS RTHQPQSLREPRRSGRVTNLPIRYMSLTETL VISDGDIEDPLTFKKAM
Sbjct: 768  LTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 827

Query: 187  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARL 246
            EDVDKDEWIKAMNLELESMYFNSVWDLVDQPD VKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 828  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 887

Query: 247  VAKGYTQVEGVDYEETFS---------------------------HTAFLNGNLEETIYM 306
            VAKGYTQVEGVDYEETFS                            TAFLNGNLEETIYM
Sbjct: 888  VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYM 947

Query: 307  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIIN 366
            QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDE CVYKRIIN
Sbjct: 948  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN 1007

Query: 367  KSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLA 426
            KSVAFLVLYVDDILLI NDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNK LA
Sbjct: 1008 KSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLA 1067

Query: 427  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 486
            LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM
Sbjct: 1068 LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 1127

Query: 487  YAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYT 546
            YAMLCTRPDICYAVGIVSRYQSNPGLAHW AVKTILKYLRRTRDY  VYGSKDLILTGYT
Sbjct: 1128 YAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYT 1187

Query: 547  DSDFQTDRDFRKSTS------------------GCIADSTMEAEYVAACEAAKEAVWLRK 606
            DSDFQTDRD RKSTS                  GCIADSTMEAEYVAACEAAKEAVWLR 
Sbjct: 1188 DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRN 1247

Query: 607  ILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQ 657
             LIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK GKHI+RKYHLIREIVHRGDVIVTQ
Sbjct: 1248 FLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ 1307

[Close]

BLAST of Cmc01g0010511 vs. ExPASy TrEMBL
Match: A0A5D3BHG7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G00150 PE=4 SV=1)

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 626/695 (90.07%), Postives = 629/695 (90.50%), Query Frame = 0


Query: 7    FILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRK 66
            +ILN VPSKSVSETPLKLWNGRKGSLRHFRIW CPAHVLENNPKKLEPRSK CLFVGY K
Sbjct: 433  YILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 492

Query: 67   GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSA 126
            GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE TEPSTR+VEEPSA
Sbjct: 493  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 552

Query: 127  LTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAM 186
            LTRVVH GSS RTHQPQSLREPRRSGRVTNLPIRYMSLTETL VISDGDIEDPLTFKKAM
Sbjct: 553  LTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 612

Query: 187  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARL 246
            EDVDKDEWIKAMNLELESMYFNSVWDLVDQPD VKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 613  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 672

Query: 247  VAKGYTQVEGVDYEETFS---------------------------HTAFLNGNLEETIYM 306
            VAKGYTQVEGVDYEETFS                            TAFLNGNLEETIYM
Sbjct: 673  VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYM 732

Query: 307  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIIN 366
            QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDE CVYKRIIN
Sbjct: 733  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN 792

Query: 367  KSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLA 426
            KSVAFLVLYVDDILLI NDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNK LA
Sbjct: 793  KSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLA 852

Query: 427  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 486
            LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM
Sbjct: 853  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 912

Query: 487  YAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYT 546
            YAMLCTRPDICYAVGIVSRYQSNPGLAHW AVKTILKYLRRTRDY  VYGSKDLILTGYT
Sbjct: 913  YAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYT 972

Query: 547  DSDFQTDRDFRKSTS------------------GCIADSTMEAEYVAACEAAKEAVWLRK 606
            DSDFQTDRD RKSTS                  GCIADSTMEAEYVAACEAAKEAVWLR 
Sbjct: 973  DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRN 1032

Query: 607  ILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQ 657
             LIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK GKHI+RKYHLIREIVHRGDVIVTQ
Sbjct: 1033 FLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ 1092

[Close]

BLAST of Cmc01g0010511 vs. ExPASy TrEMBL
Match: A0A5A7TZD7 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G001300 PE=4 SV=1)

HSP 1 Score: 1239.9 bits (3207), Expect = 0.0e+00
Identity = 626/695 (90.07%), Postives = 629/695 (90.50%), Query Frame = 0


Query: 7    FILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRK 66
            +ILN VPSKSVSETPLKLWNGRKGSLRHFRIW CPAHVLENNPKKLEPRSK CLFVGY K
Sbjct: 647  YILNCVPSKSVSETPLKLWNGRKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 706

Query: 67   GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSA 126
            GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE TEPSTR+VEEPSA
Sbjct: 707  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 766

Query: 127  LTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAM 186
            LTRVVH GSS RTHQPQSLREPRRSGRVTNLPIRYMSLTETL VISDGDIEDPLTFKKAM
Sbjct: 767  LTRVVHVGSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 826

Query: 187  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARL 246
            EDVDKDEWIKAMNLELESMYFNSVWDLVDQPD VKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 827  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 886

Query: 247  VAKGYTQVEGVDYEETFS---------------------------HTAFLNGNLEETIYM 306
            VAKGYTQVEGVDYEETFS                            TAFLNGNLEETIYM
Sbjct: 887  VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYM 946

Query: 307  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIIN 366
            QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDE CVYKRIIN
Sbjct: 947  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN 1006

Query: 367  KSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLA 426
            KSVAFLVLYVDDILLI NDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNK LA
Sbjct: 1007 KSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLA 1066

Query: 427  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 486
            LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM
Sbjct: 1067 LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 1126

Query: 487  YAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYT 546
            YAMLCTRPDICYAVGIVSRYQSNPGLAHW AVKTILKYLRRTRDY  VYGSKDLILTGYT
Sbjct: 1127 YAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYT 1186

Query: 547  DSDFQTDRDFRKSTS------------------GCIADSTMEAEYVAACEAAKEAVWLRK 606
            DSDFQTDRD RKSTS                  GCIADSTMEAEYVAACEAAKEAVWLR 
Sbjct: 1187 DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRN 1246

Query: 607  ILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQ 657
             LIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK GKHI+RKYHLIREIVHRGDVIVTQ
Sbjct: 1247 FLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ 1306

[Close]

BLAST of Cmc01g0010511 vs. ExPASy TrEMBL
Match: A0A5A7SNP8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002160 PE=4 SV=1)

HSP 1 Score: 1232.6 bits (3188), Expect = 0.0e+00
Identity = 623/695 (89.64%), Postives = 626/695 (90.07%), Query Frame = 0


Query: 7    FILNYVPSKSVSETPLKLWNGRKGSLRHFRIWCCPAHVLENNPKKLEPRSKSCLFVGYRK 66
            +ILN VPSKSVSETPLKLWNG KGSLRHFRIW CPAHVLENNPKKLEPRSK CLFVGY K
Sbjct: 507  YILNCVPSKSVSETPLKLWNGHKGSLRHFRIWGCPAHVLENNPKKLEPRSKLCLFVGYPK 566

Query: 67   GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKEITEPSTRIVEEPSA 126
            GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKE TEPSTR+VEEPSA
Sbjct: 567  GTRGGYFYDPKDNKVFVSTNATFLEEDHIREHKPRSKIVLNELSKETTEPSTRVVEEPSA 626

Query: 127  LTRVVHAGSSIRTHQPQSLREPRRSGRVTNLPIRYMSLTETLIVISDGDIEDPLTFKKAM 186
            L RVVH  SS RTHQPQSLREPRRSGRVTNLPIRYMSLTETL VISDGDIEDPLTFKKAM
Sbjct: 627  LIRVVHVRSSTRTHQPQSLREPRRSGRVTNLPIRYMSLTETLTVISDGDIEDPLTFKKAM 686

Query: 187  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARL 246
            EDVDKDEWIKAMNLELESMYFNSVWDLVDQPD VKPIGCKWIYKRKRGADGKVQTFKARL
Sbjct: 687  EDVDKDEWIKAMNLELESMYFNSVWDLVDQPDGVKPIGCKWIYKRKRGADGKVQTFKARL 746

Query: 247  VAKGYTQVEGVDYEETFS---------------------------HTAFLNGNLEETIYM 306
            VAKGYTQVEGVDYEETFS                            TAFLNGNLEETIYM
Sbjct: 747  VAKGYTQVEGVDYEETFSPVAMLKSIRILLSIAAYFDYEIWQMDVKTAFLNGNLEETIYM 806

Query: 307  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEHCVYKRIIN 366
            QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDE CVYKRIIN
Sbjct: 807  QQPEGFIIPGQEQKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQIVDEPCVYKRIIN 866

Query: 367  KSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLA 426
            KSVAFLVLYVDDILLI NDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNK LA
Sbjct: 867  KSVAFLVLYVDDILLIGNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKMLA 926

Query: 427  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 486
            LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM
Sbjct: 927  LSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLM 986

Query: 487  YAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYMPVYGSKDLILTGYT 546
            YAMLCTRPDICYAVGIVSRYQSNPGLAHW AVKTILKYLRRTRDY  VYGSKDLILTGYT
Sbjct: 987  YAMLCTRPDICYAVGIVSRYQSNPGLAHWTAVKTILKYLRRTRDYTLVYGSKDLILTGYT 1046

Query: 547  DSDFQTDRDFRKSTS------------------GCIADSTMEAEYVAACEAAKEAVWLRK 606
            DSDFQTDRD RKSTS                  GCIADSTMEAEYVAACEAAKEAVWLR 
Sbjct: 1047 DSDFQTDRDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAKEAVWLRN 1106

Query: 607  ILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYHLIREIVHRGDVIVTQ 657
             LIDLEVVPNMSKPITLYCDNSGAVANSREPRSHK GKHI+RKYHLIREIVHRGDVIVTQ
Sbjct: 1107 FLIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKRGKHIERKYHLIREIVHRGDVIVTQ 1166

[Close]

BLAST of Cmc01g0010511 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 240.7 bits (613), Expect = 3.2e-63
Identity = 155/484 (32.02%), Postives = 247/484 (51.03%), Query Frame = 0


Query: 177 EDPLTFKKAMEDVDKDEWIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGAD 236
           ++P T+ +A E +    W  AM+ E+ +M     W++   P   KPIGCKW+YK K  +D
Sbjct: 84  KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 237 GKVQTFKARLVAKGYTQVEGVDYEETFS---------------------------HTAFL 296
           G ++ +KARLVAKGYTQ EG+D+ ETFS                             AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 297 NGNLEETIYMQQPEGFIIPGQE----QKICKLNRSIYGLKQASRSWNIRFDTAIKSYGFD 356
           NG+L+E IYM+ P G+     +      +C L +SIYGLKQASR W ++F   +  +GF 
Sbjct: 204 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 357 QIVDEHCVYKRIINKSVAFLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVL 416
           Q   +H  + +I       +++YVDDI++  N+   + ++K  L + F+++DLG  ++ L
Sbjct: 264 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 417 GIQIFRDRKNKTLALSQASYIDKIVVKYSMQNSKRGLLPFRHGVTLSKEQCPKTPQDVEE 476
           G++I R      + + Q  Y   ++ +  +   K   +P    VT S      +  D  +
Sbjct: 324 GLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH----SGGDFVD 383

Query: 477 MRHIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDYM 536
            +   Y   +G LMY  + TR DI +AV  +S++   P LAH  AV  IL Y++ T    
Sbjct: 384 AK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQG 443

Query: 537 PVYGSK-DLILTGYTDSDFQTDRDFRKSTSG------------------CIADSTMEAEY 596
             Y S+ ++ L  ++D+ FQ+ +D R+ST+G                   ++ S+ EAEY
Sbjct: 444 LFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEY 503

Query: 597 VAACEAAKEAVWLRKILIDLEVVPNMSKPITLYCDNSGAVANSREPRSHKLGKHIKRKYH 611
            A   A  E +WL +   +L++   +SKP  L+CDN+ A+  +     H+  KHI+   H
Sbjct: 504 RALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCH 553

[Close]

BLAST of Cmc01g0010511 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 2.7e-17
Identity = 76/236 (32.20%), Postives = 113/236 (47.88%), Query Frame = 0


Query: 344 FLVLYVDDILLIKNDIGLLTDIKQWLATQFQMKDLGEAQFVLGIQIFRDRKNKTLALSQA 403
           +L+LYVDDILL  +   LL  +   L++ F MKDLG   + LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 404 SYIDKIVVKYSMQNSK--RGLLPFRHGVTLSKEQCPKTPQDVEEMRHIPYASAVGSLMYA 463
            Y ++I+    M + K     LP +   ++S  + P  P D        + S VG+L Y 
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSD--------FRSIVGALQYL 121

Query: 464 MLCTRPDICYAVGIVSRYQSNPGLAHWIAVKTILKYLRRTRDY-MPVYGSKDLILTGYTD 523
            L TRPDI YAV IV +    P LA +  +K +L+Y++ T  + + ++ +  L +  + D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 524 SDFQTDRDFRKSTSG------------------CIADSTMEAEYVAACEAAKEAVW 559
           SD+      R+ST+G                   ++ S+ E EY A    A E  W
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of Cmc01g0010511 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 71.6 bits (174), Expect = 2.6e-12
Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0


Query: 194 WIKAMNLELESMYFNSVWDLVDQPDEVKPIGCKWIYKRKRGADGKVQTFKARLVAKGYTQ 253
           W +AM  EL+++  N  W LV  P     +GCKW++K K  +DG +   KARLVAKG+ Q
Sbjct: 40  WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQ 99

Query: 254 VEGVDYEETFS 265
            EG+ + ET+S
Sbjct: 100 EEGIYFVETYS 110

The following BLAST results are available for this feature:

BLAST of Cmc01g0010511 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ97618.1	0.0e+00	90.07	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048404.1	0.0e+00	90.07	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	0.0e+00	90.07	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]
KAA0031826.1	0.0e+00	90.07	gag/pol protein [Cucumis melo var. makuwa] >KAA0032384.1 gag/pol protein [Cucumi...	[more]
KAA0026233.1	0.0e+00	89.64	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0010511 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.3e-121	36.67	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	6.1e-75	31.05	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	5.0e-69	32.44	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	3.6e-67	31.46	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	3.5e-30	30.65	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc01g0010511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	0.0e+00	90.07	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	0.0e+00	90.07	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5D3BHG7	0.0e+00	90.07	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold639G0015...	[more]
A0A5A7TZD7	0.0e+00	90.07	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G0013...	[more]
A0A5A7SNP8	0.0e+00	89.64	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00216...	[more]

BLAST of Cmc01g0010511 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.2e-63	32.02	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	2.7e-17	32.20	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	2.6e-12	45.07	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 208..264 e-value: 1.7E-15 score: 57.3 coord: 266..424 e-value: 8.7E-42 score: 143.4
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 169..504
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 516..639 e-value: 1.67594E-46 score: 159.171
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 208..606

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0010511.1	Cmc01g0010511.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding