Homology
BLAST of Cmc01g0007631 vs. NCBI nr
Match:
XP_016901670.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like isoform X2 [Cucumis melo])
HSP 1 Score: 456.4 bits (1173), Expect = 1.4e-124
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
Query: 1 MLLMACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGY 60
MLLMACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGY
Sbjct: 1 MLLMACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGY 60
Query: 61 VRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFL 120
VRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFL
Sbjct: 61 VRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFL 120
Query: 121 MNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDT 180
MNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDT
Sbjct: 121 MNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDT 180
Query: 181 AASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 230
AASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM
Sbjct: 181 AASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 229
BLAST of Cmc01g0007631 vs. NCBI nr
Match:
XP_016901669.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like isoform X1 [Cucumis melo])
HSP 1 Score: 451.1 bits (1159), Expect = 5.9e-123
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0
Query: 2 LLMACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYV 61
+L ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYV
Sbjct: 37 VLKACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYV 96
Query: 62 RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLM 121
RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLM
Sbjct: 97 RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLM 156
Query: 122 NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA 181
NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA
Sbjct: 157 NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA 216
Query: 182 ASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 230
ASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM
Sbjct: 217 ASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 264
BLAST of Cmc01g0007631 vs. NCBI nr
Match:
XP_016901671.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like isoform X3 [Cucumis melo])
HSP 1 Score: 430.3 bits (1105), Expect = 1.1e-116
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query: 14 MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIM 73
MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIM
Sbjct: 1 MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIM 60
Query: 74 YLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSS 133
YLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSS
Sbjct: 61 YLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSS 120
Query: 134 VAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLG 193
VAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLG
Sbjct: 121 VAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLG 180
Query: 194 ACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 230
ACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM
Sbjct: 181 ACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 216
BLAST of Cmc01g0007631 vs. NCBI nr
Match:
KAA0040268.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK07080.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 198/205 (96.59%), Postives = 200/205 (97.56%), Query Frame = 0
Query: 2 LLMACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYV 61
+L ACGDLGLCEMEMEIH QVEVCVWDSDNVNNSLVAK MFDKMPV DLTSWNTMISGYV
Sbjct: 37 VLKACGDLGLCEMEMEIHRQVEVCVWDSDNVNNSLVAKTMFDKMPVRDLTSWNTMISGYV 96
Query: 62 RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLM 121
RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNY TLNDFLM
Sbjct: 97 RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYFTLNDFLM 156
Query: 122 NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA 181
NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA
Sbjct: 157 NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA 216
Query: 182 ASDEITIVSVLGACEKITALQFGKS 207
ASDEITIVSVLGACEKITALQFGK+
Sbjct: 217 ASDEITIVSVLGACEKITALQFGKA 241
BLAST of Cmc01g0007631 vs. NCBI nr
Match:
XP_038887372.1 (pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benincasa hispida])
HSP 1 Score: 360.5 bits (924), Expect = 1.0e-95
Identity = 193/243 (79.42%), Postives = 205/243 (84.36%), Query Frame = 0
Query: 2 LLMACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSL-----------VAKKMFDKMPVSD 61
+L ACGDLGL E+ MEIH QVE+C W+SD VNNSL VA+K+FDKMP D
Sbjct: 151 VLKACGDLGLREIGMEIHSQVEICGWESDIYVNNSLLAMYLKFGNVDVARKVFDKMPERD 210
Query: 62 LTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTS---LAAIKQGKEIHC 121
LTSWNTMISGYVRNNN+MEALTI YL K LKADGTTLLALLT+ LAAIKQGKEIHC
Sbjct: 211 LTSWNTMISGYVRNNNSMEALTIFYLMEKGGLKADGTTLLALLTACADLAAIKQGKEIHC 270
Query: 122 YAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAF 181
YAVRNNY TLN+FLMNSLIDMYSNCS VAAARQLFEELK KDTVSWNSIISC+Q SGDAF
Sbjct: 271 YAVRNNYFTLNEFLMNSLIDMYSNCSCVAAARQLFEELKIKDTVSWNSIISCHQRSGDAF 330
Query: 182 ESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAF 230
ESLRLF Q L EDTAA DEITIV+VLGACEKI ALQFGKSVHSYLTKIG+FLNSFLGTA
Sbjct: 331 ESLRLFCQMLTEDTAAPDEITIVAVLGACEKIAALQFGKSVHSYLTKIGIFLNSFLGTAL 390
BLAST of Cmc01g0007631 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 122.1 bits (305), Expect = 8.2e-27
Identity = 69/197 (35.03%), Postives = 118/197 (59.90%), Query Frame = 0
Query: 38 AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLA- 97
A+K+FD++PV D+ SWN MISGY N EAL + K+ ++ D +T++ ++++ A
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 98 --AIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNS 157
+I+ G+++H + + + + N ++N+LID+YS C + A LFE L KD +SWN+
Sbjct: 279 SGSIELGRQVHLWIDDHGFGS-NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 338
Query: 158 IISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKSVHSYLTK- 217
+I Y H E+L LF Q ++ +++T++S+L AC + A+ G+ +H Y+ K
Sbjct: 339 LIGGYTHMNLYKEALLLF-QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 398
Query: 218 -IGLFLNSFLGTAFIDM 230
G+ S L T+ IDM
Sbjct: 399 LKGVTNASSLRTSLIDM 413
BLAST of Cmc01g0007631 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26
Identity = 65/195 (33.33%), Postives = 119/195 (61.03%), Query Frame = 0
Query: 38 AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAA 97
A+K+FD+MP DL SWNT+++GY +N A AL ++ + LK T++++L +++A
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 98 ---IKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNS 157
I GKEIH YA+R+ + +L + + +L+DMY+ C S+ ARQLF+ + ++ VSWNS
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVN-ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 308
Query: 158 IISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKSVHSYLTKI 217
+I Y + + E++ L +Q ++++ +++++ L AC + L+ G+ +H ++
Sbjct: 309 MIDAYVQNENPKEAM-LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 368
Query: 218 GLFLNSFLGTAFIDM 230
GL N + + I M
Sbjct: 369 GLDRNVSVVNSLISM 381
BLAST of Cmc01g0007631 vs. ExPASy Swiss-Prot
Match:
Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26
Identity = 75/243 (30.86%), Postives = 128/243 (52.67%), Query Frame = 0
Query: 2 LLMACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSLV-----------AKKMFDKMPVSD 61
++ A G L ME+H V WDS+ V N+L+ + F +M D
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451
Query: 62 LTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQ---GKEIHC 121
L SW T+I+GY +N+ +EAL + K ++ D L ++L + + +K KEIHC
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 122 YAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAF 181
+ +R L+ + N L+D+Y C ++ A ++FE +K KD VSW S+IS +G+
Sbjct: 512 HILRKG--LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 571
Query: 182 ESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAF 230
E++ LF + ++E ++D + ++ +L A ++AL G+ +H YL + G L + A
Sbjct: 572 EAVELF-RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 631
BLAST of Cmc01g0007631 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 4.5e-25
Identity = 61/196 (31.12%), Postives = 117/196 (59.69%), Query Frame = 0
Query: 38 AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEAL---TIMYLTGKSELKADGTTLLALLTS 97
A +F MP D +WN+M+SG+ +++ EAL +M+ G + ++L+ +
Sbjct: 105 ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSG 164
Query: 98 LAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNS 157
L + +G ++H ++ + + + ++ ++L+DMYS C +V A+++F+E+ ++ VSWNS
Sbjct: 165 LNDMNKGVQVHSLIAKSPFLS-DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS 224
Query: 158 IISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKSVHSYLTKI 217
+I+C++ +G A E+L +F Q ++E DE+T+ SV+ AC ++A++ G+ VH + K
Sbjct: 225 LITCFEQNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 284
Query: 218 GLFLNS-FLGTAFIDM 230
N L AF+DM
Sbjct: 285 DKLRNDIILSNAFVDM 298
BLAST of Cmc01g0007631 vs. ExPASy Swiss-Prot
Match:
Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 4.5e-25
Identity = 72/225 (32.00%), Postives = 114/225 (50.67%), Query Frame = 0
Query: 38 AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTS--- 97
A+K+FD+ PV DL SWN +I+GY + A +A+ + L +K D T++ L++S
Sbjct: 210 ARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSM 269
Query: 98 LAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNS 157
L + +GKE + Y V+ N + L+N+L+DM+S C + AR++F+ L+ + VSW +
Sbjct: 270 LGDLNRGKEFYEY-VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTT 329
Query: 158 IISCYQHSGDAFESLRLF------------------------------YQTLIEDTAASD 217
+IS Y G S +LF +Q + D
Sbjct: 330 MISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPD 389
Query: 218 EITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 230
EIT++ L AC ++ AL G +H Y+ K L LN LGT+ +DM
Sbjct: 390 EITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM 433
BLAST of Cmc01g0007631 vs. ExPASy TrEMBL
Match:
A0A1S4E107 (pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495572 PE=4 SV=1)
HSP 1 Score: 456.4 bits (1173), Expect = 6.8e-125
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
Query: 1 MLLMACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGY 60
MLLMACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGY
Sbjct: 1 MLLMACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGY 60
Query: 61 VRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFL 120
VRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFL
Sbjct: 61 VRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFL 120
Query: 121 MNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDT 180
MNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDT
Sbjct: 121 MNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDT 180
Query: 181 AASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 230
AASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM
Sbjct: 181 AASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 229
BLAST of Cmc01g0007631 vs. ExPASy TrEMBL
Match:
A0A1S4E0C9 (pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495572 PE=4 SV=1)
HSP 1 Score: 451.1 bits (1159), Expect = 2.9e-123
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 0
Query: 2 LLMACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYV 61
+L ACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYV
Sbjct: 37 VLKACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYV 96
Query: 62 RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLM 121
RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLM
Sbjct: 97 RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLM 156
Query: 122 NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA 181
NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA
Sbjct: 157 NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA 216
Query: 182 ASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 230
ASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM
Sbjct: 217 ASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 264
BLAST of Cmc01g0007631 vs. ExPASy TrEMBL
Match:
A0A1S4E0B7 (pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495572 PE=4 SV=1)
HSP 1 Score: 430.3 bits (1105), Expect = 5.2e-117
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query: 14 MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIM 73
MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIM
Sbjct: 1 MEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIM 60
Query: 74 YLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSS 133
YLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSS
Sbjct: 61 YLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSS 120
Query: 134 VAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLG 193
VAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLG
Sbjct: 121 VAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLG 180
Query: 194 ACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 230
ACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM
Sbjct: 181 ACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 216
BLAST of Cmc01g0007631 vs. ExPASy TrEMBL
Match:
A0A5A7TBH8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003980 PE=4 SV=1)
HSP 1 Score: 392.9 bits (1008), Expect = 9.2e-106
Identity = 198/205 (96.59%), Postives = 200/205 (97.56%), Query Frame = 0
Query: 2 LLMACGDLGLCEMEMEIHCQVEVCVWDSDNVNNSLVAKKMFDKMPVSDLTSWNTMISGYV 61
+L ACGDLGLCEMEMEIH QVEVCVWDSDNVNNSLVAK MFDKMPV DLTSWNTMISGYV
Sbjct: 37 VLKACGDLGLCEMEMEIHRQVEVCVWDSDNVNNSLVAKTMFDKMPVRDLTSWNTMISGYV 96
Query: 62 RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYCTLNDFLM 121
RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNY TLNDFLM
Sbjct: 97 RNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQGKEIHCYAVRNNYFTLNDFLM 156
Query: 122 NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA 181
NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA
Sbjct: 157 NSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAFESLRLFYQTLIEDTA 216
Query: 182 ASDEITIVSVLGACEKITALQFGKS 207
ASDEITIVSVLGACEKITALQFGK+
Sbjct: 217 ASDEITIVSVLGACEKITALQFGKA 241
BLAST of Cmc01g0007631 vs. ExPASy TrEMBL
Match:
A0A6J1GMH0 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455614 PE=3 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 7.3e-95
Identity = 189/243 (77.78%), Postives = 204/243 (83.95%), Query Frame = 0
Query: 2 LLMACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSL-----------VAKKMFDKMPVSD 61
+L ACGDLGL EM EIH QVEVC WDSD VNNSL VA+K+FDKMP D
Sbjct: 150 VLKACGDLGLSEMGREIHTQVEVCGWDSDVYVNNSLLAMYLKFGNLDVARKVFDKMPDRD 209
Query: 62 LTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTS---LAAIKQGKEIHC 121
TSWNT+ISGYVRNNNAMEAL I YL GK+ LKADGTTLLALL++ LAAIKQGKEIHC
Sbjct: 210 TTSWNTLISGYVRNNNAMEALMIFYLMGKAGLKADGTTLLALLSACVDLAAIKQGKEIHC 269
Query: 122 YAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAF 181
YA+RNNY + N+FLMNSLIDMYSNC+SVA ARQLFEELK KDTVSWNSIISCYQ SGDAF
Sbjct: 270 YAIRNNYVSSNEFLMNSLIDMYSNCNSVAVARQLFEELKIKDTVSWNSIISCYQRSGDAF 329
Query: 182 ESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAF 230
ESLRLF Q LIE+TAA DEIT+V+VLGACEKITALQFGKSVHSYLTK G+FLNSFLGTA
Sbjct: 330 ESLRLFCQMLIEETAAPDEITLVAVLGACEKITALQFGKSVHSYLTKTGIFLNSFLGTAL 389
BLAST of Cmc01g0007631 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 122.1 bits (305), Expect = 5.8e-28
Identity = 69/197 (35.03%), Postives = 118/197 (59.90%), Query Frame = 0
Query: 38 AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLA- 97
A+K+FD++PV D+ SWN MISGY N EAL + K+ ++ D +T++ ++++ A
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 98 --AIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNS 157
+I+ G+++H + + + + N ++N+LID+YS C + A LFE L KD +SWN+
Sbjct: 279 SGSIELGRQVHLWIDDHGFGS-NLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 338
Query: 158 IISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKSVHSYLTK- 217
+I Y H E+L LF Q ++ +++T++S+L AC + A+ G+ +H Y+ K
Sbjct: 339 LIGGYTHMNLYKEALLLF-QEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 398
Query: 218 -IGLFLNSFLGTAFIDM 230
G+ S L T+ IDM
Sbjct: 399 LKGVTNASSLRTSLIDM 413
BLAST of Cmc01g0007631 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 121.3 bits (303), Expect = 1.0e-27
Identity = 65/195 (33.33%), Postives = 119/195 (61.03%), Query Frame = 0
Query: 38 AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAA 97
A+K+FD+MP DL SWNT+++GY +N A AL ++ + LK T++++L +++A
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 98 ---IKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNS 157
I GKEIH YA+R+ + +L + + +L+DMY+ C S+ ARQLF+ + ++ VSWNS
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVN-ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNS 308
Query: 158 IISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKSVHSYLTKI 217
+I Y + + E++ L +Q ++++ +++++ L AC + L+ G+ +H ++
Sbjct: 309 MIDAYVQNENPKEAM-LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVEL 368
Query: 218 GLFLNSFLGTAFIDM 230
GL N + + I M
Sbjct: 369 GLDRNVSVVNSLISM 381
BLAST of Cmc01g0007631 vs. TAIR 10
Match:
AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 120.6 bits (301), Expect = 1.7e-27
Identity = 75/243 (30.86%), Postives = 128/243 (52.67%), Query Frame = 0
Query: 2 LLMACGDLGLCEMEMEIHCQVEVCVWDSD-NVNNSLV-----------AKKMFDKMPVSD 61
++ A G L ME+H V WDS+ V N+L+ + F +M D
Sbjct: 392 IIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKD 451
Query: 62 LTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTSLAAIKQ---GKEIHC 121
L SW T+I+GY +N+ +EAL + K ++ D L ++L + + +K KEIHC
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 122 YAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNSIISCYQHSGDAF 181
+ +R L+ + N L+D+Y C ++ A ++FE +K KD VSW S+IS +G+
Sbjct: 512 HILRKG--LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 571
Query: 182 ESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAF 230
E++ LF + ++E ++D + ++ +L A ++AL G+ +H YL + G L + A
Sbjct: 572 EAVELF-RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAV 631
BLAST of Cmc01g0007631 vs. TAIR 10
Match:
AT2G22410.1 (SLOW GROWTH 1 )
HSP 1 Score: 116.3 bits (290), Expect = 3.2e-26
Identity = 72/225 (32.00%), Postives = 114/225 (50.67%), Query Frame = 0
Query: 38 AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEALTIMYLTGKSELKADGTTLLALLTS--- 97
A+K+FD+ PV DL SWN +I+GY + A +A+ + L +K D T++ L++S
Sbjct: 210 ARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSM 269
Query: 98 LAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNS 157
L + +GKE + Y V+ N + L+N+L+DM+S C + AR++F+ L+ + VSW +
Sbjct: 270 LGDLNRGKEFYEY-VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTT 329
Query: 158 IISCYQHSGDAFESLRLF------------------------------YQTLIEDTAASD 217
+IS Y G S +LF +Q + D
Sbjct: 330 MISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPD 389
Query: 218 EITIVSVLGACEKITALQFGKSVHSYLTKIGLFLNSFLGTAFIDM 230
EIT++ L AC ++ AL G +H Y+ K L LN LGT+ +DM
Sbjct: 390 EITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDM 433
BLAST of Cmc01g0007631 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 116.3 bits (290), Expect = 3.2e-26
Identity = 61/196 (31.12%), Postives = 117/196 (59.69%), Query Frame = 0
Query: 38 AKKMFDKMPVSDLTSWNTMISGYVRNNNAMEAL---TIMYLTGKSELKADGTTLLALLTS 97
A +F MP D +WN+M+SG+ +++ EAL +M+ G + ++L+ +
Sbjct: 105 ADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSG 164
Query: 98 LAAIKQGKEIHCYAVRNNYCTLNDFLMNSLIDMYSNCSSVAAARQLFEELKTKDTVSWNS 157
L + +G ++H ++ + + + ++ ++L+DMYS C +V A+++F+E+ ++ VSWNS
Sbjct: 165 LNDMNKGVQVHSLIAKSPFLS-DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNS 224
Query: 158 IISCYQHSGDAFESLRLFYQTLIEDTAASDEITIVSVLGACEKITALQFGKSVHSYLTKI 217
+I+C++ +G A E+L +F Q ++E DE+T+ SV+ AC ++A++ G+ VH + K
Sbjct: 225 LITCFEQNGPAVEALDVF-QMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKN 284
Query: 218 GLFLNS-FLGTAFIDM 230
N L AF+DM
Sbjct: 285 DKLRNDIILSNAFVDM 298
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_016901670.1 | 1.4e-124 | 100.00 | PREDICTED: pentatricopeptide repeat-containing protein At3g63370, chloroplastic-... | [more] |
XP_016901669.1 | 5.9e-123 | 99.12 | PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic-... | [more] |
XP_016901671.1 | 1.1e-116 | 100.00 | PREDICTED: pentatricopeptide repeat-containing protein At3g63370, chloroplastic-... | [more] |
KAA0040268.1 | 1.9e-105 | 96.59 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK07080... | [more] |
XP_038887372.1 | 1.0e-95 | 79.42 | pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Benin... | [more] |
Match Name | E-value | Identity | Description | |
Q9LN01 | 8.2e-27 | 35.03 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
Q3E6Q1 | 1.4e-26 | 33.33 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
Q9M1V3 | 2.4e-26 | 30.86 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
Q9SIT7 | 4.5e-25 | 31.12 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
Q9SJZ3 | 4.5e-25 | 32.00 | Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A1S4E107 | 6.8e-125 | 100.00 | pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like isofor... | [more] |
A0A1S4E0C9 | 2.9e-123 | 99.12 | pentatricopeptide repeat-containing protein At4g35130, chloroplastic-like isofor... | [more] |
A0A1S4E0B7 | 5.2e-117 | 100.00 | pentatricopeptide repeat-containing protein At3g63370, chloroplastic-like isofor... | [more] |
A0A5A7TBH8 | 9.2e-106 | 96.59 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1GMH0 | 7.3e-95 | 77.78 | putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS... | [more] |