Cmc00g0002011 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc00g0002011
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Photosystem II reaction center protein Z
Location	CMiso1.1chr00: 2369247 .. 2369435 (+)
RNA-Seq Expression	Cmc00g0002011
Synteny	Cmc00g0002011

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCGTTGTATTTGCTTCTCCTGAAGGTTGGTCGGGTAACAAAAATGTTGTATTTTCCGGTACATCATTATGGATTGGATTAGTCTTTCTGGTGGGTATCCTTAATTCTCTTATCTCTTGA

mRNA sequence

ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCGTTGTATTTGCTTCTCCTGAAGGTTGGTCGGGTAACAAAAATGTTGTATTTTCCGGTACATCATTATGGATTGGATTAGTCTTTCTGGTGGGTATCCTTAATTCTCTTATCTCTTGA

Coding sequence (CDS)

ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCGTTGTATTTGCTTCTCCTGAAGGTTGGTCGGGTAACAAAAATGTTGTATTTTCCGGTACATCATTATGGATTGGATTAGTCTTTCTGGTGGGTATCCTTAATTCTCTTATCTCTTGA

Protein sequence

MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSLIS

Homology

[Close]

BLAST of Cmc00g0002011 vs. NCBI nr
Match: YP_004841780.1 (photosystem II protein Z [Cucumis melo subsp. melo] >YP_009860070.1 photosystem II protein Z [Cucumis melo subsp. agrestis] >ASY96613.1 photosystem II protein Z [Cucumis melo var. conomon] >ASY96700.1 photosystem II protein Z [Cucumis melo var. makuwa] >ASY96787.1 photosystem II protein Z [Cucumis melo var. momordica] >ASY96874.1 photosystem II protein Z [Cucumis melo var. dudaim] >ASY96961.1 photosystem II protein Z [Cucumis melo var. cantalupo] >ASY97135.1 photosystem II protein Z [Cucumis melo var. inodorus] >ASY97309.1 photosystem II protein Z [Cucumis melo var. flexuosus] >QJF46380.1 photosystem II protein Z [Cucumis melo])

HSP 1 Score: 113.6 bits (283), Expect = 6.0e-22
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. NCBI nr
Match: YP_009004041.1 (photosystem II protein Z [Cucumis hystrix] >YP_009166880.1 photosystem II protein Z [Osyris alba] >YP_009317383.1 photosystem II protein Z [Coccinia grandis] >YP_009325986.1 photosystem II protein Z [Citrullus lanatus] >YP_009346482.1 photosystem II protein Z [Cucumis x hytivus] >YP_009348028.1 photosystem II protein Z [Citrullus mucosospermus] >YP_009420791.1 photosystem II protein Z [Citrullus colocynthis] >YP_009431554.1 photosystem II protein Z [Citrullus amarus] >YP_009431639.1 photosystem II protein Z [Citrullus rehmii] >YP_009456143.1 photosystem II protein Z [Lagenaria siceraria] >YP_009526299.1 photosystem II protein z [Hemsleya lijiangensis] >YP_009560832.1 PsbZ [Trichosanthes kirilowii] >YP_009751482.1 photosystem II subunit Z [Thladiantha dubia] >YP_009751735.1 photosystem II subunit Z [Herpetospermum pedunculosum] >YP_009751819.1 photosystem II subunit Z [Indofevillea khasiana] >YP_009751903.1 photosystem II subunit Z [Cyclanthera pedata] >YP_009752240.1 photosystem II subunit Z [Trichosanthes baviensis] >YP_009752324.1 photosystem II subunit Z [Bryonia marmorata] >YP_009752409.1 photosystem II subunit Z [Trichosanthes tricuspidata] >YP_009752493.1 photosystem II subunit Z [Trichosanthes tubiflora] >YP_009752578.1 photosystem II subunit Z [Trichosanthes homophylla] >YP_009752663.1 photosystem II subunit Z [Ampelosycios humblotii] >YP_009752747.1 photosystem II subunit Z [Cyclantheropsis parviflora] >YP_009752832.1 photosystem II subunit Z [Baijiania yunnanensis] >YP_009753171.1 photosystem II subunit Z [Trichosanthes truncata] >YP_009753255.1 photosystem II subunit Z [Nothoalsomitra suberosa] >YP_009753617.1 photosystem II subunit Z [Trichosanthes wallichiana] >YP_009753702.1 photosystem II subunit Z [Trichosanthes nervifolia] >YP_009753786.1 photosystem II subunit Z [Trichosanthes pilosa] >YP_009753871.1 photosystem II subunit Z [Trichosanthes lobata] >YP_009945414.1 photosystem II protein Z [Sechium edule] >YP_010119731.1 photosystem II protein Z [Hemsleya zhejiangensis] >YP_247596.1 photosystem II protein Z [Cucumis sativus] >Q4VZN6.1 RecName: Full=Photosystem II reaction center protein Z; Short=PSII-Z [Cucumis sativus] >ALF03298.1 photosystem II protein Z [Cucumis sativus var. hardwickii] >APW82458.1 photosystem II protein Z [Citrullus lanatus subsp. vulgaris] >AVE15328.1 PsbZ [Cucumis sativus var. sativus] >AXU40457.1 photosystem II protein Z [Gomphogyne cissiformis var. villosa] >AXU40631.1 photosystem II protein Z [Gomphogyne cissiformis var. cissiformis] >QHB75960.1 photosystem II protein Z [Cucumis melo subsp. melo] >QIT04047.1 photosystem II subunit Z [Luffa aegyptiaca] >QJD26468.1 PsbZ [Trichosanthes kirilowii var. japonica] >QJD26642.1 PsbZ [Trichosanthes rosthornii] >QKX48470.1 photosystem II protein Z [Luffa acutangula] >QNM38528.1 photosystem II protein Z [Lagenaria siceraria var. microcarpa] >QZL38590.1 photosystem II subunit Z [Citrullus naudinianus] >QZL38678.1 photosystem II subunit Z [Citrullus ecirrhosus])

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-21
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASP+GWSGNKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. NCBI nr
Match: YP_009751987.1 (photosystem II subunit Z [Cionosicys macranthus] >YP_009753001.1 photosystem II subunit Z [Gerrardanthus macrorhizus] >QIT05228.1 photosystem II subunit Z [Cionosicys macranthus] >QIT06073.1 photosystem II subunit Z [Gerrardanthus macrorhizus])

HSP 1 Score: 112.1 bits (279), Expect = 1.8e-21
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASP+GWSGNKN+VFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNIVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. NCBI nr
Match: YP_010144251.1 (photosystem II reaction center Z protein [Poikilospermum lanceolatum] >QQL92502.1 photosystem II reaction center Z protein [Poikilospermum lanceolatum])

HSP 1 Score: 112.1 bits (279), Expect = 1.8e-21
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASP+GWSGNKNVVFSGTSLWIGLVFL+GILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLIGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. NCBI nr
Match: YP_009430624.1 (photosystem II protein z [Gynostemma cardiospermum] >YP_009439801.1 photosystem II protein Z [Gynostemma laxiflorum] >YP_009439888.1 photosystem II protein z [Gynostemma caulopterum] >YP_009468858.1 photosystem II protein z [Gynostemma compressum] >YP_010015136.1 photosystem II protein Z [Gynostemma yixingense] >ART65116.1 photosystem II protein z [Gynostemma cardiospermum] >ATG86696.1 photosystem II protein Z [Gynostemma laxiflorum] >ATG86783.1 photosystem II protein z [Gynostemma caulopterum] >AVA29874.1 photosystem II protein z [Gynostemma compressum] >QOI14261.1 photosystem II protein Z [Gynostemma yixingense])

HSP 1 Score: 112.1 bits (279), Expect = 1.8e-21
Identity = 60/62 (96.77%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVP+VFASP+GWSGNKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPIVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. ExPASy Swiss-Prot
Match: Q4VZN6 (Photosystem II reaction center protein Z OS=Cucumis sativus OX=3659 GN=psbZ PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.8e-24
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASP+GWSGNKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. ExPASy Swiss-Prot
Match: Q32902 (Photosystem II reaction center protein Z OS=Pisum sativum OX=3888 GN=psbZ PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 8.8e-24
Identity = 60/62 (96.77%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASP+GWS NKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. ExPASy Swiss-Prot
Match: P56790 (Photosystem II reaction center protein Z OS=Arabidopsis thaliana OX=3702 GN=psbZ PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.1e-23
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALI+TSSILLISVPVVFASP+GWS NKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIITSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. ExPASy Swiss-Prot
Match: Q9MTN5 (Photosystem II reaction center protein Z OS=Oenothera elata subsp. hookeri OX=85636 GN=psbZ PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.0e-23
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALI TSS+LLISVPVVFASPEGWS NKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIATSSLLLISVPVVFASPEGWSSNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. ExPASy Swiss-Prot
Match: Q09MI1 (Photosystem II reaction center protein Z OS=Citrus sinensis OX=2711 GN=psbZ PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.5e-23
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALI TSSILLISVPVVFASP+GWS NKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIATSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. ExPASy TrEMBL
Match: A0A249RZC1 (Photosystem II reaction center protein Z OS=Cucumis melo var. cantalupensis OX=3658 GN=psbZ PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. ExPASy TrEMBL
Match: A0A1S4EU04 (Photosystem II reaction center protein Z OS=Cucumis melo OX=3656 GN=psbZ PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. ExPASy TrEMBL
Match: A0A286NG07 (Photosystem II reaction center protein Z OS=Cucumis melo var. flexuosus OX=1120798 GN=psbZ PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. ExPASy TrEMBL
Match: A0A249RXJ9 (Photosystem II reaction center protein Z OS=Cucumis melo subsp. agrestis OX=217619 GN=psbZ PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. ExPASy TrEMBL
Match: A0A249RZ13 (Photosystem II reaction center protein Z OS=Cucumis melo var. dudaim OX=2034236 GN=psbZ PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

[Close]

BLAST of Cmc00g0002011 vs. TAIR 10
Match: ATCG00300.1 (YCF9 )

HSP 1 Score: 109.8 bits (273), Expect = 8.1e-25
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 0


Query: 1  MTIAFQLAVFALIVTSSILLISVPVVFASPEGWSGNKNVVFSGTSLWIGLVFLVGILNSL 60
          MTIAFQLAVFALI+TSSILLISVPVVFASP+GWS NKNVVFSGTSLWIGLVFLVGILNSL
Sbjct: 1  MTIAFQLAVFALIITSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIGLVFLVGILNSL 60

Query: 61 IS 63
          IS
Sbjct: 61 IS 62

The following BLAST results are available for this feature:

BLAST of Cmc00g0002011 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841780.1	6.0e-22	100.00	photosystem II protein Z [Cucumis melo subsp. melo] >YP_009860070.1 photosystem ...	[more]
YP_009004041.1	1.3e-21	98.39	photosystem II protein Z [Cucumis hystrix] >YP_009166880.1 photosystem II protei...	[more]
YP_009751987.1	1.8e-21	96.77	photosystem II subunit Z [Cionosicys macranthus] >YP_009753001.1 photosystem II ...	[more]
YP_010144251.1	1.8e-21	96.77	photosystem II reaction center Z protein [Poikilospermum lanceolatum] >QQL92502....	[more]
YP_009430624.1	1.8e-21	96.77	photosystem II protein z [Gynostemma cardiospermum] >YP_009439801.1 photosystem ...	[more]

BLAST of Cmc00g0002011 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZN6	1.8e-24	98.39	Photosystem II reaction center protein Z OS=Cucumis sativus OX=3659 GN=psbZ PE=3...	[more]
Q32902	8.8e-24	96.77	Photosystem II reaction center protein Z OS=Pisum sativum OX=3888 GN=psbZ PE=1 S...	[more]
P56790	1.1e-23	95.16	Photosystem II reaction center protein Z OS=Arabidopsis thaliana OX=3702 GN=psbZ...	[more]
Q9MTN5	2.0e-23	95.16	Photosystem II reaction center protein Z OS=Oenothera elata subsp. hookeri OX=85...	[more]
Q09MI1	2.5e-23	95.16	Photosystem II reaction center protein Z OS=Citrus sinensis OX=2711 GN=psbZ PE=3...	[more]

BLAST of Cmc00g0002011 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A249RZC1	2.9e-22	100.00	Photosystem II reaction center protein Z OS=Cucumis melo var. cantalupensis OX=3...	[more]
A0A1S4EU04	2.9e-22	100.00	Photosystem II reaction center protein Z OS=Cucumis melo OX=3656 GN=psbZ PE=3 SV...	[more]
A0A286NG07	2.9e-22	100.00	Photosystem II reaction center protein Z OS=Cucumis melo var. flexuosus OX=11207...	[more]
A0A249RXJ9	2.9e-22	100.00	Photosystem II reaction center protein Z OS=Cucumis melo subsp. agrestis OX=2176...	[more]
A0A249RZ13	2.9e-22	100.00	Photosystem II reaction center protein Z OS=Cucumis melo var. dudaim OX=2034236 ...	[more]

BLAST of Cmc00g0002011 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00300.1	8.1e-25	95.16	YCF9	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002644	Photosystem II PsbZ, reaction centre	TIGRFAM	TIGR03043	TIGR03043	coord: 4..61 e-value: 1.0E-25 score: 87.4
IPR002644	Photosystem II PsbZ, reaction centre	PFAM	PF01737	Ycf9	coord: 5..61 e-value: 1.4E-24 score: 85.8
IPR002644	Photosystem II PsbZ, reaction centre	PANTHER	PTHR34971	PHOTOSYSTEM II REACTION CENTER PROTEIN Z	coord: 1..62
IPR002644	Photosystem II PsbZ, reaction centre	HAMAP	MF_00644	PSII_PsbZ	coord: 1..62 score: 18.184326
IPR036512	Photosystem II PsbZ superfamily	GENE3D	1.10.287.740	Photosystem II PsbZ, reaction centre	coord: 1..62 e-value: 2.3E-31 score: 109.6
IPR036512	Photosystem II PsbZ superfamily	SUPERFAMILY	161055	PsbZ-like	coord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc00g0002011.1	Cmc00g0002011.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042549	photosystem II stabilization
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009539	photosystem II reaction center
cellular_component	GO:0009523	photosystem II