Cmc00g0001931 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATCTACTTATCGTCTTTTTGCCCCTGCTCGGTAGTGGAGTAGCAGGTTTTTTCGGACGTTTTCTAGGATCTGAAGGAACCGCTATAATCACCACTACGTGCGTTTCATTCTCTTCTCTCTTCTCTTTTCTTGCTTTTTATGAAGTCGCACTGGGAGCTAGTGCTTGCTATCTAAGAATTTCTCCATGGATCTCATCGGAAATGTTTGATGCTTCTTGGGGCTTCTTTGGCGACCGTGAAGTCACCGGATGA ATGTATCTACTTATCGTCTTTTTGCCCCTGCTCGGTAGTGGAGTAGCAGGTTTTTTCGGACGTTTTCTAGGATCTGAAGGAACCGCTATAATCACCACTACGTGCGTTTCATTCTCTTCTCTCTTCTCTTTTCTTGCTTTTTATGAAGTCGCACTGGGAGCTAGTGCTTGCTATCTAAGAATTTCTCCATGGATCTCATCGGAAATGTTTGATGCTTCTTGGGGCTTCTTTGGCGACCGTGAAGTCACCGGATGA ATGTATCTACTTATCGTCTTTTTGCCCCTGCTCGGTAGTGGAGTAGCAGGTTTTTTCGGACGTTTTCTAGGATCTGAAGGAACCGCTATAATCACCACTACGTGCGTTTCATTCTCTTCTCTCTTCTCTTTTCTTGCTTTTTATGAAGTCGCACTGGGAGCTAGTGCTTGCTATCTAAGAATTTCTCCATGGATCTCATCGGAAATGTTTGATGCTTCTTGGGGCTTCTTTGGCGACCGTGAAGTCACCGGATGA MYLLIVFLPLLGSGVAGFFGRFLGSEGTAIITTTCVSFSSLFSFLAFYEVALGASACYLRISPWISSEMFDASWGFFGDREVTG Homology
BLAST of Cmc00g0001931 vs. NCBI nr
Match: TYK30811.1 (NADH dehydrogenase subunit 5 [Cucumis melo var. makuwa]) HSP 1 Score: 167.2 bits (422), Expect = 6.2e-38 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Cmc00g0001931 vs. NCBI nr
Match: AZP40275.1 (NADH dehydrogenase subunit 5 [Cucumis melo var. momordica]) HSP 1 Score: 156.8 bits (395), Expect = 8.4e-35 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Cmc00g0001931 vs. NCBI nr
Match: ANI86455.1 (NADH dehydrogenase subunit 5 [Hordeum vulgare subsp. vulgare] >EHK62709.1 hypothetical protein M3S_K08, partial [Sorghum bicolor] >KAF7008736.1 hypothetical protein CFC21_023434 [Triticum aestivum] >KAF7104930.1 hypothetical protein CFC21_105793 [Triticum aestivum]) HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34 Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 0
BLAST of Cmc00g0001931 vs. NCBI nr
Match: pir|S14115| (NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 5, truncated - sugar beet mitochondrion [Beta vulgaris subsp. vulgaris] >CAA39307.1 unnamed protein product [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 154.5 bits (389), Expect = 4.2e-34 Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of Cmc00g0001931 vs. NCBI nr
Match: NP_064038.1 (orf116 gene product [Beta vulgaris subsp. vulgaris] >YP_004222280.1 hypothetical protein BevumaM_p042 [Beta vulgaris subsp. maritima] >YP_004842088.1 hypothetical protein BemaM_p041 [Beta macrocarpa] >CBJ14102.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBJ23354.1 hypothetical protein [Beta vulgaris subsp. maritima] >CBX24890.1 hypothetical protein [Beta macrocarpa] >CBX33293.1 hypothetical protein [Beta vulgaris subsp. maritima] >BAA99349.1 orf116 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 154.5 bits (389), Expect = 4.2e-34 Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of Cmc00g0001931 vs. ExPASy Swiss-Prot
Match: Q37680 (NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum OX=4565 GN=ND5 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.1e-32 Identity = 70/79 (88.61%), Postives = 74/79 (93.67%), Query Frame = 0
BLAST of Cmc00g0001931 vs. ExPASy Swiss-Prot
Match: P10330 (NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana OX=3950 GN=ND5 PE=2 SV=2) HSP 1 Score: 139.4 bits (350), Expect = 1.8e-32 Identity = 69/79 (87.34%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Cmc00g0001931 vs. ExPASy Swiss-Prot
Match: P29388 (NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana OX=3702 GN=ND5 PE=1 SV=3) HSP 1 Score: 138.7 bits (348), Expect = 3.1e-32 Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 0
BLAST of Cmc00g0001931 vs. ExPASy Swiss-Prot
Match: P26849 (NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha OX=3197 GN=ND5 PE=3 SV=2) HSP 1 Score: 120.2 bits (300), Expect = 1.1e-26 Identity = 58/79 (73.42%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of Cmc00g0001931 vs. ExPASy Swiss-Prot
Match: P48920 (NADH-ubiquinone oxidoreductase chain 5 OS=Chondrus crispus OX=2769 GN=ND5 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 4.5e-15 Identity = 43/79 (54.43%), Postives = 53/79 (67.09%), Query Frame = 0
BLAST of Cmc00g0001931 vs. ExPASy TrEMBL
Match: A0A5D3E5D8 (NADH dehydrogenase subunit 5 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76685G00010 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 3.0e-38 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Cmc00g0001931 vs. ExPASy TrEMBL
Match: A0A3S9JIG6 (NADH-ubiquinone oxidoreductase chain 5 OS=Cucumis melo var. momordica OX=2034244 GN=nad5 PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 4.1e-35 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Cmc00g0001931 vs. ExPASy TrEMBL
Match: H0I4F2 (Uncharacterized protein (Fragment) OS=Sorghum bicolor OX=4558 GN=M3S_K08 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.3e-35 Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 0
BLAST of Cmc00g0001931 vs. ExPASy TrEMBL
Match: A0A191TDL7 (NADH dehydrogenase subunit 5 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=nad5 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 5.3e-35 Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 0
BLAST of Cmc00g0001931 vs. ExPASy TrEMBL
Match: E6ZE87 (Uncharacterized protein orf116b OS=Beta vulgaris subsp. maritima OX=350892 GN=orf116b PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34 Identity = 76/84 (90.48%), Postives = 80/84 (95.24%), Query Frame = 0
BLAST of Cmc00g0001931 vs. TAIR 10
Match: ATMG00060.1 (NADH dehydrogenase subunit 5C ) HSP 1 Score: 136.0 bits (341), Expect = 1.4e-32 Identity = 68/79 (86.08%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of Cmc00g0001931 vs. TAIR 10
Match: ATMG00513.1 (NADH dehydrogenase 5A ) HSP 1 Score: 136.0 bits (341), Expect = 1.4e-32 Identity = 68/79 (86.08%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of Cmc00g0001931 vs. TAIR 10
Match: ATMG00665.1 (NADH dehydrogenase 5B ) HSP 1 Score: 136.0 bits (341), Expect = 1.4e-32 Identity = 68/79 (86.08%), Postives = 73/79 (92.41%), Query Frame = 0
BLAST of Cmc00g0001931 vs. TAIR 10
Match: ATMG00670.1 (hypothetical protein ) HSP 1 Score: 51.2 bits (121), Expect = 4.6e-07 Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0
BLAST of Cmc00g0001931 vs. TAIR 10
Match: AT2G07777.1 (ATP synthase 9 mitochondrial ) HSP 1 Score: 43.5 bits (101), Expect = 9.7e-05 Identity = 35/71 (49.30%), Postives = 39/71 (54.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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