Cmc00g0001731 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc00g0001731
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NADH-ubiquinone oxidoreductase
Location	CMiso1.1chr00: 2114163 .. 2115755 (+)
RNA-Seq Expression	Cmc00g0001731
Synteny	Cmc00g0001731

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTGCTTCTGCTCGCCGCTGGCGCACCTCTCCTAACTATTGCCCATTTATTCTGGAATCATTTTTTGAGGAGGGACAATTTGACATATTTCTGCCAAATACTTCTATTATTAAGTACGGCTGGTACCATTTCGATGTGTTTCGATTCTTTCTTTAAAGAGAGGTTTGATGCTTTTGAATTCATTGTATTAATTCCACTTCCTACTCGCAGTATGCTCTTTATGATCTCGGCTCATGATTCAATTTCCATGTATTTAGCTATTGAGCCTCAAAGTTTATGTTTTTATGTGATGGCAGCATCAAAAAGAAAGTCAGAATTTTCCACGGAAGCCGGCTCGAAATATTTGATCTTAGGTGCATTTTCCTCTGGAATCTTACTGTTTGGGTACGACCGGACAACTACCGATATCTCAAAATCTCCTTTCTGAGAAAGAAATGATTTAGTAAAATGGAAGAAATTCCAAGCCTATCTGTAGGACTCCCAGAGCAAGAAAGAAGGTTCAATCAAGGCTCAAAGAATTTGAGATGCCTCCGTCCAAAAGGAAAGCAAAGAAAGCTATCCAGATCCATTGAGGCGGAAGTTTGAGTTCCATCTTTTCCTTAGTGGATCAAATGGGTCCGTCCTTGAATCCGGCCATATTCCCACTTAGCGGTCGGACTCATTCATGGAACTCAAACGGAAGGTCGGCTAATATATAGGATGAAAGTAGGGAAATCCAAGTATATATATACAAGGTCAGACCCTCTATGTAGTTGTCGAGATAGGGCGATCGATCTACATCTTTGTCCATAGCCCTGGTGTCTCGATCTCCTACGTGCGAAATCGGACTAGTTCCTATGGAGATTCCCCTTGGTCTAATTCCACGCCTTATGACGAAAGGGGAGTCGGCGTGGCGTAAAGTGAAGATTGAGGGAAGTAGAGCGAAATTCCCTGATGGGGTATTCCGAAGGTGTAACCTAGGCAACGAAAAAGGGGCCCGATACTGAAAGACGAGTCGCAGAGCGAAGGAACTCGACCCTTTTGAGATGAGAGTTGTAGAGAAAGAAAGAGAAAGAGAAAAAAAGACTTGATCTTTCATGATCTCTGAATTCGATCTTTCATTCTCTCTTTACAGGAGCAAAGCAACTCAACTGTCAAGGAGAAGAGCGACCGGTTCACCAAACCCCGACCCAGCGTCCCACGTTCTCCAGGTCCGAAGGGATCCAGTGCCCAACTACCGACTCCTCCCGGAATTGCATTATCGGAGCCGAGCCAGGAATGGCCGTTAGTGGACACCCACCACTTTTCACCGGTTAGAGAGGCCCTCTTTAATACATGAAAAAAAGATGTTCACAGGGGCCAGAAAGACTCGGTCATAGGAACTGAGACCACCTACGCGCTGGTAAAGGAAAACCACCTCGACCGGATCAGAGTAAACAAGAATGTCGATCAGGCCCCTTGCCTTGAAAGAATTCACACGCGGCCACCAGCTTTCCCAAAATCAGGGGAGATCCGCTGCTTACTGTTCACGGAAACATCCGACCTATACGAGAGTCAAGTCGTCCATATGAACCTACTTTTTGGGCTTAAAGGAAGATAAAAGGAAGAAAAGA

mRNA sequence

CCTTGCTTCTGCTCGCCGCTGGCGCACCTCTCCTAACTATTGCCCATTTATTCTGGAATCATTTTTTGAGGAGGGACAATTTGACATATTTCTGCCAAATACTTCTATTATTAAGTACGGCTGGTACCATTTCGATGTGTTTCGATTCTTTCTTTAAAGAGAGGTTTGATGCTTTTGAATTCATTGTATTAATTCCACTTCCTACTCGCAGTATGCTCTTTATGATCTCGGCTCATGATTCAATTTCCATGTATTTAGCTATTGAGCCTCAAAGTTTATGTTTTTATGTGATGGCAGCATCAAAAAGAAAGTCAGAATTTTCCACGGAAGCCGGCTCGAAATATTTGATCTTAGGTGCATTTTCCTCTGGAATCTTACTGTTTGGGTACGACCGGACAACTACCGATATCTCAAAATCTCCTTTCTGAGAAAGAAATGATTTAGTAAAATGGAAGAAATTCCAAGCCTATCTGTAGGACTCCCAGAGCAAGAAAGAAGGTTCAATCAAGGCTCAAAGAATTTGAGATGCCTCCGTCCAAAAGGAAAGCAAAGAAAGCTATCCAGATCCATTGAGGCGGAAGTTTGAGTTCCATCTTTTCCTTAGTGGATCAAATGGGTCCGTCCTTGAATCCGGCCATATTCCCACTTAGCGGTCGGACTCATTCATGGAACTCAAACGGAAGGTCGGCTAATATATAGGATGAAAGTAGGGAAATCCAAGTATATATATACAAGGTCAGACCCTCTATGTAGTTGTCGAGATAGGGCGATCGATCTACATCTTTGTCCATAGCCCTGGTGTCTCGATCTCCTACGTGCGAAATCGGACTAGTTCCTATGGAGATTCCCCTTGGTCTAATTCCACGCCTTATGACGAAAGGGGAGTCGGCGTGGCGTAAAGTGAAGATTGAGGGAAGTAGAGCGAAATTCCCTGATGGGGTATTCCGAAGGTGTAACCTAGGCAACGAAAAAGGGGCCCGATACTGAAAGACGAGTCGCAGAGCGAAGGAACTCGACCCTTTTGAGATGAGAGTTGTAGAGAAAGAAAGAGAAAGAGAAAAAAAGACTTGATCTTTCATGATCTCTGAATTCGATCTTTCATTCTCTCTTTACAGGAGCAAAGCAACTCAACTGTCAAGGAGAAGAGCGACCGGTTCACCAAACCCCGACCCAGCGTCCCACGTTCTCCAGGTCCGAAGGGATCCAGTGCCCAACTACCGACTCCTCCCGGAATTGCATTATCGGAGCCGAGCCAGGAATGGCCGTTAGTGGACACCCACCACTTTTCACCGGTTAGAGAGGCCCTCTTTAATACATGAAAAAAAGATGTTCACAGGGGCCAGAAAGACTCGGTCATAGGAACTGAGACCACCTACGCGCTGGTAAAGGAAAACCACCTCGACCGGATCAGAGTAAACAAGAATGTCGATCAGGCCCCTTGCCTTGAAAGAATTCACACGCGGCCACCAGCTTTCCCAAAATCAGGGGAGATCCGCTGCTTACTGTTCACGGAAACATCCGACCTATACGAGAGTCAAGTCGTCCATATGAACCTACTTTTTGGGCTTAAAGGAAGATAAAAGGAAGAAAAGA

Coding sequence (CDS)

ATGTGTTTCGATTCTTTCTTTAAAGAGAGGTTTGATGCTTTTGAATTCATTGTATTAATTCCACTTCCTACTCGCAGTATGCTCTTTATGATCTCGGCTCATGATTCAATTTCCATGTATTTAGCTATTGAGCCTCAAAGTTTATGTTTTTATGTGATGGCAGCATCAAAAAGAAAGTCAGAATTTTCCACGGAAGCCGGCTCGAAATATTTGATCTTAGGTGCATTTTCCTCTGGAATCTTACTGTTTGGGTACGACCGGACAACTACCGATATCTCAAAATCTCCTTTCTGA

Protein sequence

MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKSEFSTEAGSKYLILGAFSSGILLFGYDRTTTDISKSPF

Homology

[Close]

BLAST of Cmc00g0001731 vs. NCBI nr
Match: WP_131747034.1 (hypothetical protein [Candidatus Frankia meridionalis])

HSP 1 Score: 177.6 bits (449), Expect = 5.3e-41
Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFDSF +ERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS
Sbjct: 45  MCFDSFEQERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 104

Query: 61  EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 93
           EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI
Sbjct: 105 EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 136

[Close]

BLAST of Cmc00g0001731 vs. NCBI nr
Match: YP_009306103.1 (NADH dehydrogenase subunit 2 [Corchorus capsularis] >AOO95941.1 NADH dehydrogenase subunit 2 [Corchorus capsularis])

HSP 1 Score: 174.9 bits (442), Expect = 3.5e-40
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFDSF +ERFDAFEFIVLIPLPTRSMLFMISAHDSI+MYLAIEPQSLCFYV+AASKRKS
Sbjct: 99  MCFDSFEQERFDAFEFIVLIPLPTRSMLFMISAHDSIAMYLAIEPQSLCFYVIAASKRKS 158

Query: 61  EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 93
           EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI
Sbjct: 159 EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 190

[Close]

BLAST of Cmc00g0001731 vs. NCBI nr
Match: YP_009532825.1 (NADH dehydrogenase subunit 2 [Glycine soja] >AYD72973.1 NADH dehydrogenase subunit 2 [Glycine soja])

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFDS  +ERFDAFEFIVLIPLPTRSMLFMISAHDSI+MYLAIEPQSLCFYVMAASKRKS
Sbjct: 85  MCFDSSEQERFDAFEFIVLIPLPTRSMLFMISAHDSIAMYLAIEPQSLCFYVMAASKRKS 144

Query: 61  EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 93
           EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI
Sbjct: 145 EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 176

[Close]

BLAST of Cmc00g0001731 vs. NCBI nr
Match: RHN73589.1 (putative NADH:ubiquinone reductase (H(+)-translocating) [Medicago truncatula])

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFDS  +ERFDAFEFIVLIPLPTRSMLFMISAHDSI+MYLAIEPQSLCFYVMAASKRKS
Sbjct: 58  MCFDSSEQERFDAFEFIVLIPLPTRSMLFMISAHDSIAMYLAIEPQSLCFYVMAASKRKS 117

Query: 61  EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 93
           EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI
Sbjct: 118 EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 149

[Close]

BLAST of Cmc00g0001731 vs. NCBI nr
Match: PKI40733.1 (hypothetical protein CRG98_038871 [Punica granatum])

HSP 1 Score: 170.6 bits (431), Expect = 6.5e-39
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
          MCFD F +ERFDAFEFIVLIPLPTRSMLFMISAHDSI+MYLAIEPQSLCFYV+AASKRKS
Sbjct: 1  MCFDFFEQERFDAFEFIVLIPLPTRSMLFMISAHDSIAMYLAIEPQSLCFYVIAASKRKS 60

Query: 61 EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 93
          EFSTEAGSKYLILGAF SGILLFGYDRTTTDI
Sbjct: 61 EFSTEAGSKYLILGAFPSGILLFGYDRTTTDI 92

[Close]

BLAST of Cmc00g0001731 vs. ExPASy Swiss-Prot
Match: P93401 (NADH-ubiquinone oxidoreductase chain 2 OS=Oenothera berteroana OX=3950 GN=ND2 PE=2 SV=2)

HSP 1 Score: 135.2 bits (339), Expect = 4.0e-31
Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFD F +ERFDAFEFIVLI L T SMLFMISA+D I+MYLAIE QSLCFYV+AASKRKS
Sbjct: 99  MCFDFFEQERFDAFEFIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVLAASKRKS 158

Query: 61  EFSTEAGSKYLILGAFSSGILLFG 85
           EFSTEAG KYLILGAFSSGILLFG
Sbjct: 159 EFSTEAGLKYLILGAFSSGILLFG 182

[Close]

BLAST of Cmc00g0001731 vs. ExPASy Swiss-Prot
Match: O05000 (NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana OX=3702 GN=ND2 PE=1 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-30
Identity = 71/84 (84.52%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFD F +ERFDAFEFIVLI L T  MLFMISA+D I+MYLAIE QSLCFYV+AASKRKS
Sbjct: 110 MCFDFFDQERFDAFEFIVLILLSTCGMLFMISAYDLIAMYLAIELQSLCFYVIAASKRKS 169

Query: 61  EFSTEAGSKYLILGAFSSGILLFG 85
           EFSTEAG KYLILGAFSSGILLFG
Sbjct: 170 EFSTEAGLKYLILGAFSSGILLFG 193

[Close]

BLAST of Cmc00g0001731 vs. ExPASy Swiss-Prot
Match: P26846 (NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha OX=3197 GN=ND2 PE=3 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 2.9e-26
Identity = 65/84 (77.38%), Postives = 70/84 (83.33%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MC D F +E  +AFE IVLI L T SMLFMISA+D I+MYLAIE QSLCFYV+AASKR S
Sbjct: 98  MCLDYFKQESLNAFESIVLILLSTCSMLFMISAYDLIAMYLAIELQSLCFYVIAASKRDS 157

Query: 61  EFSTEAGSKYLILGAFSSGILLFG 85
           EFSTEAG KY ILGAFSSGILLFG
Sbjct: 158 EFSTEAGLKYFILGAFSSGILLFG 181

[Close]

BLAST of Cmc00g0001731 vs. ExPASy Swiss-Prot
Match: P48903 (NADH-ubiquinone oxidoreductase chain 2 OS=Chondrus crispus OX=2769 GN=ND2 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 8.6e-18
Identity = 45/76 (59.21%), Postives = 62/76 (81.58%), Query Frame = 0


Query: 9   ERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKSEFSTEAGS 68
           ER ++FE+ +LI L   ++LF+I ++D ++MYL+IE QSL FY++A+ KR SEFSTEAG 
Sbjct: 107 ERINSFEYWILILLAIVAILFIIQSYDLLTMYLSIEFQSLIFYILASFKRTSEFSTEAGL 166

Query: 69  KYLILGAFSSGILLFG 85
           KY +LGAFSSG+LLFG
Sbjct: 167 KYFVLGAFSSGLLLFG 182

[Close]

BLAST of Cmc00g0001731 vs. ExPASy Swiss-Prot
Match: Q2K9R9 (NADH-quinone oxidoreductase subunit N OS=Rhizobium etli (strain CFN 42 / ATCC 51251) OX=347834 GN=nuoN PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.3e-15
Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 8   KERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKSEFSTEAG 67
           + + D FEF VL+ L T  +L MISA+D IS+YLA+E QSL  YV+AA  R S  STEAG
Sbjct: 100 ENQLDKFEFPVLLVLATLGILLMISANDLISLYLALELQSLALYVVAAINRDSLKSTEAG 159

Query: 68  SKYLILGAFSSGILLFG 85
            KY +LGA SSG+LL+G
Sbjct: 160 LKYFVLGALSSGMLLYG 176

[Close]

BLAST of Cmc00g0001731 vs. ExPASy TrEMBL
Match: A0A1C9I9Q6 (NADH dehydrogenase subunit 2 OS=Corchorus capsularis OX=210143 GN=nad2 PE=3 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.7e-40
Identity = 88/92 (95.65%), Postives = 91/92 (98.91%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFDSF +ERFDAFEFIVLIPLPTRSMLFMISAHDSI+MYLAIEPQSLCFYV+AASKRKS
Sbjct: 99  MCFDSFEQERFDAFEFIVLIPLPTRSMLFMISAHDSIAMYLAIEPQSLCFYVIAASKRKS 158

Query: 61  EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 93
           EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI
Sbjct: 159 EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 190

[Close]

BLAST of Cmc00g0001731 vs. ExPASy TrEMBL
Match: A0A386JND3 (NADH dehydrogenase subunit 2 OS=Glycine soja OX=3848 GN=nad2 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.9e-40
Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFDS  +ERFDAFEFIVLIPLPTRSMLFMISAHDSI+MYLAIEPQSLCFYVMAASKRKS
Sbjct: 85  MCFDSSEQERFDAFEFIVLIPLPTRSMLFMISAHDSIAMYLAIEPQSLCFYVMAASKRKS 144

Query: 61  EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 93
           EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI
Sbjct: 145 EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 176

[Close]

BLAST of Cmc00g0001731 vs. ExPASy TrEMBL
Match: A0A396J602 (Putative NADH:ubiquinone reductase (H(+)-translocating) OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr2g0300121 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 4.9e-40
Identity = 88/92 (95.65%), Postives = 90/92 (97.83%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFDS  +ERFDAFEFIVLIPLPTRSMLFMISAHDSI+MYLAIEPQSLCFYVMAASKRKS
Sbjct: 58  MCFDSSEQERFDAFEFIVLIPLPTRSMLFMISAHDSIAMYLAIEPQSLCFYVMAASKRKS 117

Query: 61  EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 93
           EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI
Sbjct: 118 EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 149

[Close]

BLAST of Cmc00g0001731 vs. ExPASy TrEMBL
Match: A0A2I0IAA6 (Proton_antipo_M domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_038871 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.2e-39
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
          MCFD F +ERFDAFEFIVLIPLPTRSMLFMISAHDSI+MYLAIEPQSLCFYV+AASKRKS
Sbjct: 1  MCFDFFEQERFDAFEFIVLIPLPTRSMLFMISAHDSIAMYLAIEPQSLCFYVIAASKRKS 60

Query: 61 EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 93
          EFSTEAGSKYLILGAF SGILLFGYDRTTTDI
Sbjct: 61 EFSTEAGSKYLILGAFPSGILLFGYDRTTTDI 92

[Close]

BLAST of Cmc00g0001731 vs. ExPASy TrEMBL
Match: A0A5D2LEW2 (Proton_antipo_M domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D04G102100v1 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.1e-39
Identity = 86/92 (93.48%), Postives = 89/92 (96.74%), Query Frame = 0


Query: 1  MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
          MCFDSF +ERFDAFEFIVLIPL TRSMLFMISAHDSI+MYLAIEPQSLCFYV+AASKRKS
Sbjct: 1  MCFDSFEQERFDAFEFIVLIPLSTRSMLFMISAHDSIAMYLAIEPQSLCFYVIAASKRKS 60

Query: 61 EFSTEAGSKYLILGAFSSGILLFGYDRTTTDI 93
          EFSTEAGSKYLILG FSSGILLFGYDRTTTDI
Sbjct: 61 EFSTEAGSKYLILGVFSSGILLFGYDRTTTDI 92

[Close]

BLAST of Cmc00g0001731 vs. TAIR 10
Match: ATMG00285.1 (NADH dehydrogenase 2A )

HSP 1 Score: 151.0 bits (380), Expect = 5.0e-37
Identity = 77/84 (91.67%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFDS  +ERFDAFEFIVLIPLPTR MLFMISAHD I+MYLAIEPQSLCFYV+AASKRKS
Sbjct: 110 MCFDSSDQERFDAFEFIVLIPLPTRGMLFMISAHDLIAMYLAIEPQSLCFYVIAASKRKS 169

Query: 61  EFSTEAGSKYLILGAFSSGILLFG 85
           EFSTEAGSKYLILGAFSSGILLFG
Sbjct: 170 EFSTEAGSKYLILGAFSSGILLFG 193

[Close]

BLAST of Cmc00g0001731 vs. TAIR 10
Match: ATMG01320.1 (NADH dehydrogenase 2B )

HSP 1 Score: 151.0 bits (380), Expect = 5.0e-37
Identity = 77/84 (91.67%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1   MCFDSFFKERFDAFEFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKS 60
           MCFDS  +ERFDAFEFIVLIPLPTR MLFMISAHD I+MYLAIEPQSLCFYV+AASKRKS
Sbjct: 110 MCFDSSDQERFDAFEFIVLIPLPTRGMLFMISAHDLIAMYLAIEPQSLCFYVIAASKRKS 169

Query: 61  EFSTEAGSKYLILGAFSSGILLFG 85
           EFSTEAGSKYLILGAFSSGILLFG
Sbjct: 170 EFSTEAGSKYLILGAFSSGILLFG 193

[Close]

BLAST of Cmc00g0001731 vs. TAIR 10
Match: ATCG00890.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 50.4 bits (119), Expect = 9.2e-07
Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 15 EFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKSEFSTEAGSKYLILG 74
          EF++ I   T   +F+  A+D I++++A E  SLC Y+++   +K   S EA  KYL++G
Sbjct: 5  EFLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDIRSNEATMKYLLMG 64

Query: 75 AFSSGILLFGY 86
            SS IL+ G+
Sbjct: 65 GASSSILVHGF 75

[Close]

BLAST of Cmc00g0001731 vs. TAIR 10
Match: ATCG01250.1 (NADH-Ubiquinone/plastoquinone (complex I) protein )

HSP 1 Score: 50.4 bits (119), Expect = 9.2e-07
Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 15 EFIVLIPLPTRSMLFMISAHDSISMYLAIEPQSLCFYVMAASKRKSEFSTEAGSKYLILG 74
          EF++ I   T   +F+  A+D I++++A E  SLC Y+++   +K   S EA  KYL++G
Sbjct: 5  EFLLFILTATLGGMFLCGANDLITIFVAPECFSLCSYLLSGYTKKDIRSNEATMKYLLMG 64

Query: 75 AFSSGILLFGY 86
            SS IL+ G+
Sbjct: 65 GASSSILVHGF 75

The following BLAST results are available for this feature:

BLAST of Cmc00g0001731 vs. NCBI nr


Match Name	E-value	Identity	Description
WP_131747034.1	5.3e-41	97.83	hypothetical protein [Candidatus Frankia meridionalis]	[more]
YP_009306103.1	3.5e-40	95.65	NADH dehydrogenase subunit 2 [Corchorus capsularis] >AOO95941.1 NADH dehydrogena...	[more]
YP_009532825.1	1.0e-39	95.65	NADH dehydrogenase subunit 2 [Glycine soja] >AYD72973.1 NADH dehydrogenase subun...	[more]
RHN73589.1	1.0e-39	95.65	putative NADH:ubiquinone reductase (H(+)-translocating) [Medicago truncatula]	[more]
PKI40733.1	6.5e-39	93.48	hypothetical protein CRG98_038871 [Punica granatum]	[more]

BLAST of Cmc00g0001731 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93401	4.0e-31	85.71	NADH-ubiquinone oxidoreductase chain 2 OS=Oenothera berteroana OX=3950 GN=ND2 PE...	[more]
O05000	1.5e-30	84.52	NADH-ubiquinone oxidoreductase chain 2 OS=Arabidopsis thaliana OX=3702 GN=ND2 PE...	[more]
P26846	2.9e-26	77.38	NADH-ubiquinone oxidoreductase chain 2 OS=Marchantia polymorpha OX=3197 GN=ND2 P...	[more]
P48903	8.6e-18	59.21	NADH-ubiquinone oxidoreductase chain 2 OS=Chondrus crispus OX=2769 GN=ND2 PE=3 S...	[more]
Q2K9R9	2.3e-15	58.44	NADH-quinone oxidoreductase subunit N OS=Rhizobium etli (strain CFN 42 / ATCC 51...	[more]

BLAST of Cmc00g0001731 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1C9I9Q6	1.7e-40	95.65	NADH dehydrogenase subunit 2 OS=Corchorus capsularis OX=210143 GN=nad2 PE=3 SV=1	[more]
A0A386JND3	4.9e-40	95.65	NADH dehydrogenase subunit 2 OS=Glycine soja OX=3848 GN=nad2 PE=4 SV=1	[more]
A0A396J602	4.9e-40	95.65	Putative NADH:ubiquinone reductase (H(+)-translocating) OS=Medicago truncatula O...	[more]
A0A2I0IAA6	3.2e-39	93.48	Proton_antipo_M domain-containing protein OS=Punica granatum OX=22663 GN=CRG98_0...	[more]
A0A5D2LEW2	4.1e-39	93.48	Proton_antipo_M domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES...	[more]

BLAST of Cmc00g0001731 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00285.1	5.0e-37	91.67	NADH dehydrogenase 2A	[more]
ATMG01320.1	5.0e-37	91.67	NADH dehydrogenase 2B	[more]
ATCG00890.1	9.2e-07	38.03	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]
ATCG01250.1	9.2e-07	38.03	NADH-Ubiquinone/plastoquinone (complex I) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 33..84 e-value: 1.8E-11 score: 43.8
None	No IPR available	PANTHER	PTHR22773	NADH DEHYDROGENASE	coord: 1..86
None	No IPR available	PANTHER	PTHR22773:SF106	NADH DEHYDROGENASE SUBUNIT 2-RELATED	coord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc00g0001731.1	Cmc00g0001731.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042773	ATP synthesis coupled electron transport
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016020	membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity