CmaCh20G008280 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G008280
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	late embryogenesis abundant protein-like
Location	Cma_Chr20: 3941796 .. 3943080 (-)
RNA-Seq Expression	CmaCh20G008280
Synteny	CmaCh20G008280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTTCAAAGCTTCACCCATTTTCAGAACCTTCATCAATGGCGAATGTACGTGACGAGTTCGGCAACCCGGTCCAGCTGACCGACGAGCGAGGGAACCCGGTTCAGCTGACTGACGAATTCGGCAACCCCGTGCAACTCACTGGAGTTGCCACCACTGGGTCCCATCCCGTTGGGAACCCGGTTCAGATGAGTGAGGAATTCGGCAACCCCATGCACCCGACCGGAGTTTCCACCACTGGGTCCAAGCCCGTTGAGAACCCGGTTCAGATGAATGAGGAATTGGGCAACCCCATGCACCCCACCGGAGTTGCCACCACTGGGTCCAAGCCCGTGTCCAGTGGCGGGGACGTTGTTGGCAGGACGCAGCCCCTTAGGGAAGGCCATGATGCCTCGCTGGCTCGTTCTAGCAGCTCCAGCTCTAGCTCGGTGAGTGAATTGTGTGTGTTGTGTGTTGAGATTATGAATTTAGAGCTTTTACGCCATAGTAAAAAAGAGGTACAAGGGATATATTAATGAAATCTTCCTTTTTGAAACGAAATGACAAGTAAGTAATGTGATCATTTTGTCTATCTTGATTTATGTCGGGTGTCAATCTAGGGGGAAAAAAATAAATAAATAATAAATAATTTTCCTTTAAATTTAGACAAATAACTTTGAACTTCACCATGCAATTATTTGCCATGAATGGTATGTTTATCCTTTGAACTCCCAACTAAGTAAAGGGAATGATCTTGAAGATATGATTGATGTTGTGTCGTGGTTGCAGTCGGAGGACGACGGGCAAGGTGGGAGGAGGAGGAAGAAGAAGGGGTTGACGCAGAAGATAAAGGAGAAGTTAACAGGAAAACACAAGGAGGCAGGGACGACAACGACGGGGGCGGGGCATCACCAGAGCACCACCGTGACATCGACGGTGGACGTCGAACACCAAGAACATGGGAAGAAGGGGGTTCTTGAGAAGATCAAAGAGAAACTTCCTGGCCACCATTAGTCCACAAATCTGTGTTGTGTTTGTATGAATGATATGATGTGTTTTTATGGATTTCGGTGTGGATATGTTTCCAACTATCTTGGAAGTGTGTGGTTTTCTGTCGAATTTAATTTGTAGAACTCCTTTTTGTATATATTTTTTAATTTTAATTTCTGGTTGGTTGGTTGGTTGCTTTGAAATTACTAAATATTCTTTCCAATGTTTTGACCTTTTCAACTTTAGAGGACCAATGTTTAATGGGAGGCCAATCCCAATGTATTTTTAAATTAATCAAAATATTCTTTAAACTTATT

mRNA sequence

GACTTCAAAGCTTCACCCATTTTCAGAACCTTCATCAATGGCGAATGTACGTGACGAGTTCGGCAACCCGGTCCAGCTGACCGACGAGCGAGGGAACCCGGTTCAGCTGACTGACGAATTCGGCAACCCCGTGCAACTCACTGGAGTTGCCACCACTGGGTCCCATCCCGTTGGGAACCCGGTTCAGATGAGTGAGGAATTCGGCAACCCCATGCACCCGACCGGAGTTTCCACCACTGGGTCCAAGCCCGTTGAGAACCCGGTTCAGATGAATGAGGAATTGGGCAACCCCATGCACCCCACCGGAGTTGCCACCACTGGGTCCAAGCCCGTGTCCAGTGGCGGGGACGTTGTTGGCAGGACGCAGCCCCTTAGGGAAGGCCATGATGCCTCGCTGGCTCGTTCTAGCAGCTCCAGCTCTAGCTCGTCGGAGGACGACGGGCAAGGTGGGAGGAGGAGGAAGAAGAAGGGGTTGACGCAGAAGATAAAGGAGAAGTTAACAGGAAAACACAAGGAGGCAGGGACGACAACGACGGGGGCGGGGCATCACCAGAGCACCACCGTGACATCGACGGTGGACGTCGAACACCAAGAACATGGGAAGAAGGGGGTTCTTGAGAAGATCAAAGAGAAACTTCCTGGCCACCATTAGTCCACAAATCTGTGTTGTGTTTGTATGAATGATATGATGTGTTTTTATGGATTTCGGTGTGGATATGTTTCCAACTATCTTGGAAGTGTGTGGTTTTCTGTCGAATTTAATTTGTAGAACTCCTTTTTGTATATATTTTTTAATTTTAATTTCTGGTTGGTTGGTTGGTTGCTTTGAAATTACTAAATATTCTTTCCAATGTTTTGACCTTTTCAACTTTAGAGGACCAATGTTTAATGGGAGGCCAATCCCAATGTATTTTTAAATTAATCAAAATATTCTTTAAACTTATT

Coding sequence (CDS)

ATGGCGAATGTACGTGACGAGTTCGGCAACCCGGTCCAGCTGACCGACGAGCGAGGGAACCCGGTTCAGCTGACTGACGAATTCGGCAACCCCGTGCAACTCACTGGAGTTGCCACCACTGGGTCCCATCCCGTTGGGAACCCGGTTCAGATGAGTGAGGAATTCGGCAACCCCATGCACCCGACCGGAGTTTCCACCACTGGGTCCAAGCCCGTTGAGAACCCGGTTCAGATGAATGAGGAATTGGGCAACCCCATGCACCCCACCGGAGTTGCCACCACTGGGTCCAAGCCCGTGTCCAGTGGCGGGGACGTTGTTGGCAGGACGCAGCCCCTTAGGGAAGGCCATGATGCCTCGCTGGCTCGTTCTAGCAGCTCCAGCTCTAGCTCGTCGGAGGACGACGGGCAAGGTGGGAGGAGGAGGAAGAAGAAGGGGTTGACGCAGAAGATAAAGGAGAAGTTAACAGGAAAACACAAGGAGGCAGGGACGACAACGACGGGGGCGGGGCATCACCAGAGCACCACCGTGACATCGACGGTGGACGTCGAACACCAAGAACATGGGAAGAAGGGGGTTCTTGAGAAGATCAAAGAGAAACTTCCTGGCCACCATTAG

Protein sequence

MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMHPTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASLARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTVDVEHQEHGKKGVLEKIKEKLPGHH

Homology

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BLAST of CmaCh20G008280 vs. ExPASy Swiss-Prot
Match: P21298 (Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 96/209 (45.93%), Postives = 116/209 (55.50%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MA+++DE GNP+ LTD  GNPVQL+DEFGNP+ +TGVA++       P       GN   
Sbjct: 1   MADLKDERGNPIHLTDAYGNPVQLSDEFGNPMHITGVASSA------PQYKDSVTGN--- 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVAT-TGSKPVSSGGDVVGRTQPLREGHDA- 120
                     P E P            P GVA  TG+   ++ G     T   +E H + 
Sbjct: 61  ------IAEYPTEAP------------PAGVAAGTGAAATTAAGVTTSETTTGQEHHGSL 120

Query: 121 --SLARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKL-TGKHKEAGTTTTGAGHHQSTT 180
              L RS SSSSSSSEDDGQGGRR  KK +  KIK+KL  GKHK+  T TT      +TT
Sbjct: 121 GEHLRRSGSSSSSSSEDDGQGGRR--KKSIKDKIKDKLGGGKHKDEQTPTTATTTGPTTT 180

Query: 181 VTSTVDVEHQEHGKKGVLEKIKEKLPGHH 205
            T+T     Q H KKG+LEKIKEKLPGHH
Sbjct: 181 TTTTGAAADQHHEKKGILEKIKEKLPGHH 180

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BLAST of CmaCh20G008280 vs. ExPASy Swiss-Prot
Match: Q96261 (Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.0e-25
Identity = 96/208 (46.15%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNP-VQLTDEFGNPVQLTG-VATTGSHPVGNPVQMSEEFGNP 60
           MA++RDE GNP+ LTD +GNP V LTDE GNP+ LTG V++T  H       ++E     
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAE----- 60

Query: 61  MHPTGVSTTG-SKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHD 120
            HPT  ST G + P   P             T    TG   VS+G       Q      +
Sbjct: 61  -HPT--STVGETHPAAAPAGAGA-------ATAATATG---VSAGTGATTTGQQHHGSLE 120

Query: 121 ASLARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKL-TGKHKEAGTTTTGAGHHQSTTV 180
             L RS SSSSSSSEDDGQGGRR  KK + +KIKEK  +GKHK+  T  T      +TT 
Sbjct: 121 EHLRRSGSSSSSSSEDDGQGGRR--KKSIKEKIKEKFGSGKHKDEQTPATA-----TTTG 180

Query: 181 TSTVDVEHQEHGKKGVLEKIKEKLPGHH 205
            +T D   Q H KKG+LEKIK+KLPGHH
Sbjct: 181 PATTD---QPHEKKGILEKIKDKLPGHH 180

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BLAST of CmaCh20G008280 vs. ExPASy Swiss-Prot
Match: Q07322 (Embryogenic cell protein 40 OS=Daucus carota OX=4039 GN=ECP40 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 8.4e-23
Identity = 111/310 (35.81%), Postives = 131/310 (42.26%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGS------HPVG-------- 60
           MA++RDE GNP+QLTD+ GNPVQLTDE+GNPV +TGVATTG+      H VG        
Sbjct: 1   MADLRDEKGNPIQLTDQHGNPVQLTDEYGNPVHITGVATTGATTGHHDHGVGGASHGGVG 60

Query: 61  -----------------------------------NPVQMSEEFG--------------- 120
                                               P  +    G               
Sbjct: 61  STGLGGVAGAAGLAGATAAAATHGGSHGGTGTHGVGPTGVGAAHGGTGTTTGLGTGTGTT 120

Query: 121 ---NPMHPTGVSTT---GSKPVENPVQMNEELG--NPMHPTGVAT--------------- 180
              + M PTG+  T   GS  +         LG  + M PTG                  
Sbjct: 121 GQTHGMGPTGIGGTHGVGSTGIGGAHGGTGVLGQTHGMGPTGTGAAHGGLGTGQSGLGSS 180

Query: 181 ------------TGSKPVSSGGDVVGRTQPLREGHDASLARSSSSSSSSSEDDGQGGRRR 205
                       TGS P S+G        P ++         S+SSSSSSEDDGQGGRR 
Sbjct: 181 YATHGGLGTGIGTGSAPASAGSH---SHAPEKKTALGEQLHRSNSSSSSSEDDGQGGRR- 240

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BLAST of CmaCh20G008280 vs. ExPASy Swiss-Prot
Match: P25863 (Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.3e-15
Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 77  QMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASLARSSSSSSSSSEDDGQ 136
           Q  ++ GNP      ATTG+   + G   V        G    L RS SSSSSSSEDDG 
Sbjct: 15  QQLDQFGNPF----PATTGAYGTAGGAPAVAE----GGGLSGMLHRSGSSSSSSSEDDGL 74

Query: 137 GGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTVDVEHQEHGKKGVLEKI 196
           GGRRRKKKG+T+KIKEKL G H    T++ G+    +TT   T  V H+   KKG++EKI
Sbjct: 75  GGRRRKKKGITEKIKEKLPGHHDSNKTSSLGS----TTTAYDTGTVHHE---KKGMMEKI 127

Query: 197 KEKLPGHH 205
           KEKLPG H
Sbjct: 135 KEKLPGGH 127

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BLAST of CmaCh20G008280 vs. ExPASy Swiss-Prot
Match: P30287 (Dehydrin Rab25 OS=Oryza sativa subsp. japonica OX=39947 GN=RAB25 PE=2 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 2.9e-15
Identity = 78/220 (35.45%), Postives = 102/220 (46.36%), Query Frame = 0


Query: 8   FGNPVQLTDERGNPVQLTDEFGNPV---QLTGVATTGSHPVGNPVQMSEEFG----NPMH 67
           +G+P    D+ GNPV   D++GNPV           G     +P   + ++G       H
Sbjct: 9   YGHPYPRVDQYGNPVPPVDQYGNPVPDEPAPRDTAAGYVAPPDPAVSTGDYGLAGAEAPH 68

Query: 68  P------TGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLR- 127
           P      +G +     P         + G  + P G  T   +   S   V G +  L+ 
Sbjct: 69  PHESAVMSGAAAAAVAP--GGEAYTRDGGGVVPPAGEKTFAYEGTVSAAGVTGASGQLQP 128

Query: 128 ----EGHDA------SLARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGT 187
               EGH           +SSSSSSSSSEDDGQGG RRKKK + +KIKEKL G HK+   
Sbjct: 129 TTREEGHTTLGETLRRSGKSSSSSSSSSEDDGQGG-RRKKKSIKEKIKEKLPGSHKQEEQ 188

Query: 188 TTTGAGHHQSTTVTSTVDVEHQEHGKKGVLEKIKEKLPGH 204
              G     + T T T      +H KKG++EKIKEKLPGH
Sbjct: 189 KQAGHTAPAAGTGTGTGTHAAGKHEKKGIVEKIKEKLPGH 225

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BLAST of CmaCh20G008280 vs. ExPASy TrEMBL
Match: A0A6J1JEI1 (late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484299 PE=3 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.0e-107
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL
Sbjct: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTV 180
           ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTV
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTV 180

Query: 181 DVEHQEHGKKGVLEKIKEKLPGHH 205
           DVEHQEHGKKGVLEKIKEKLPGHH
Sbjct: 181 DVEHQEHGKKGVLEKIKEKLPGHH 204

[Close]

BLAST of CmaCh20G008280 vs. ExPASy TrEMBL
Match: A0A6J1FTT6 (late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448732 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 2.7e-101
Identity = 197/206 (95.63%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGS PVGNPVQMSEE GNPMH
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PTGVSTTG  PV NPVQM+EELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL
Sbjct: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAG--TTTTGAGHHQSTTVTS 180
           ARSSSSSSSSSEDDGQGGRR+KKKGLTQKIKEKLTGKHKEAG  TTTTGAGHHQSTTVTS
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS 180

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 205
           TVDVEHQEHGKKGVLEKIKEKLPGHH
Sbjct: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 206

[Close]

BLAST of CmaCh20G008280 vs. ExPASy TrEMBL
Match: A0A0A0LPB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249810 PE=3 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 6.6e-47
Identity = 127/206 (61.65%), Postives = 136/206 (66.02%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+QLTGV   G+ P            + +H
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGV--VGTTP------------SNLH 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PT        P  N           +HPT V TTG          V +TQP RE HDAS 
Sbjct: 61  PT--------PPSN-----------LHPTAVTTTGEN--------VAQTQPPREIHDASP 120

Query: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT--GKHKEAGTTTTGAGHHQSTTVTS 180
            RSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT  GKHKEAGTT    G H  +T T+
Sbjct: 121 RRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEAGTT----GEHHESTTTT 161

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 205
           T  VEH E GKKGV+EKIKEKLPGHH
Sbjct: 181 TTSVEHHEPGKKGVMEKIKEKLPGHH 161

[Close]

BLAST of CmaCh20G008280 vs. ExPASy TrEMBL
Match: A0A1S3CDP4 (late embryogenesis abundant protein-like OS=Cucumis melo OX=3656 GN=LOC103499700 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.4e-41
Identity = 119/206 (57.77%), Postives = 127/206 (61.65%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+ LTGV                       
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGV----------------------- 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
              V TT SK   +P      LG    PT +           G+ V +TQP RE HD S 
Sbjct: 61  ---VGTTPSK--LDPTAPPSNLG----PTTI-----------GENVAQTQPPREAHDTSP 120

Query: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT--GKHKEAGTTTTGAGHHQSTTVTS 180
            RSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT  GKHKE GT      H  + T T+
Sbjct: 121 RRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEGGT------HDSTATTTT 157

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 205
              VEHQE GKKGV+EKIKEKLPGHH
Sbjct: 181 VTSVEHQETGKKGVMEKIKEKLPGHH 157

[Close]

BLAST of CmaCh20G008280 vs. ExPASy TrEMBL
Match: A0A6J1CYY9 (late embryogenesis abundant protein-like OS=Momordica charantia OX=3673 GN=LOC111015482 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.2e-34
Identity = 111/213 (52.11%), Postives = 121/213 (56.81%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MA+VRDE GNP+QLTDERGNPV+LTDEF                                
Sbjct: 1   MADVRDERGNPIQLTDERGNPVELTDEF-------------------------------- 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLRE---GHD 120
                                 GNPMH TGVAT  SK  S+GGD VG+TQ L +      
Sbjct: 61  ----------------------GNPMHLTGVATAASKLESTGGD-VGQTQLLPDPAPDQA 120

Query: 121 ASLARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTV- 180
            S  RS+SSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTG  K  G      G HQ TTV 
Sbjct: 121 GSPRRSTSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKGEAAPAPGCHQYTTVE 158

Query: 181 ---TSTVDVE--HQEHGKKGVLEKIKEKLPGHH 205
              TSTVDVE  HQ+  KKGV+EKI+EKLPGHH
Sbjct: 181 AKTTSTVDVEPHHQDREKKGVMEKIREKLPGHH 158

[Close]

BLAST of CmaCh20G008280 vs. NCBI nr
Match: XP_022986610.1 (late embryogenesis abundant protein-like [Cucurbita maxima])

HSP 1 Score: 398.3 bits (1022), Expect = 4.0e-107
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL
Sbjct: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTV 180
           ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTV
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTV 180

Query: 181 DVEHQEHGKKGVLEKIKEKLPGHH 205
           DVEHQEHGKKGVLEKIKEKLPGHH
Sbjct: 181 DVEHQEHGKKGVLEKIKEKLPGHH 204

[Close]

BLAST of CmaCh20G008280 vs. NCBI nr
Match: XP_022944216.1 (late embryogenesis abundant protein-like [Cucurbita moschata] >KAG6571093.1 hypothetical protein SDJN03_30008, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010910.1 hypothetical protein SDJN02_27708, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377.9 bits (969), Expect = 5.7e-101
Identity = 197/206 (95.63%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGS PVGNPVQMSEE GNPMH
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PTGVSTTG  PV NPVQM+EELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL
Sbjct: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAG--TTTTGAGHHQSTTVTS 180
           ARSSSSSSSSSEDDGQGGRR+KKKGLTQKIKEKLTGKHKEAG  TTTTGAGHHQSTTVTS
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS 180

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 205
           TVDVEHQEHGKKGVLEKIKEKLPGHH
Sbjct: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 206

[Close]

BLAST of CmaCh20G008280 vs. NCBI nr
Match: XP_023513012.1 (late embryogenesis abundant protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.9 bits (951), Expect = 6.9e-99
Identity = 194/205 (94.63%), Postives = 196/205 (95.61%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGS PVGNPVQMSEEFGNPMH
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEEFGNPMH 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PTGVSTTG  PV  PVQM+EELGNPMHPTGVAT  SKPVSSGGDVVGRTQPLREGHDASL
Sbjct: 61  PTGVSTTGFNPVGGPVQMSEELGNPMHPTGVATAVSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTT-TTGAGHHQSTTVTST 180
           ARSSSSSSSSSEDDGQGGRR+KKKGLTQKIKEKLTGKHKEAGTT TTGAGHHQSTTVTST
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTMTTGAGHHQSTTVTST 180

Query: 181 VDVEHQEHGKKGVLEKIKEKLPGHH 205
           VDVEH EHGKKGVLEKIKEKLPGHH
Sbjct: 181 VDVEHHEHGKKGVLEKIKEKLPGHH 205

[Close]

BLAST of CmaCh20G008280 vs. NCBI nr
Match: XP_004150075.1 (embryogenic cell protein 40 [Cucumis sativus] >KGN61826.1 hypothetical protein Csa_006233 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 1.4e-46
Identity = 127/206 (61.65%), Postives = 136/206 (66.02%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+QLTGV   G+ P            + +H
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGV--VGTTP------------SNLH 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PT        P  N           +HPT V TTG          V +TQP RE HDAS 
Sbjct: 61  PT--------PPSN-----------LHPTAVTTTGEN--------VAQTQPPREIHDASP 120

Query: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT--GKHKEAGTTTTGAGHHQSTTVTS 180
            RSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT  GKHKEAGTT    G H  +T T+
Sbjct: 121 RRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEAGTT----GEHHESTTTT 161

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 205
           T  VEH E GKKGV+EKIKEKLPGHH
Sbjct: 181 TTSVEHHEPGKKGVMEKIKEKLPGHH 161

[Close]

BLAST of CmaCh20G008280 vs. NCBI nr
Match: XP_038902143.1 (embryogenic cell protein 40-like isoform X1 [Benincasa hispida])

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-43
Identity = 124/206 (60.19%), Postives = 132/206 (64.08%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+ LTGV  T                    
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATS------------------- 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           P+ + +T + PV                    T         GD V +TQ  RE HD S 
Sbjct: 61  PSKLDSTTTTPVS------------------YTHLDVYKRQAGDDVAQTQLTREAHDGSP 120

Query: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT--GKHKEAGTTTTGAGHHQSTTVTS 180
            RSSSSSSSSSEDDGQGG RRKKKGLTQKIKEKLT  GKHKEAG  TTGA HHQSTTVT 
Sbjct: 121 RRSSSSSSSSSEDDGQGG-RRKKKGLTQKIKEKLTGSGKHKEAG--TTGAEHHQSTTVT- 165

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 205
           T  VEHQEHGKKGV+EKIKE+LPGHH
Sbjct: 181 TSTVEHQEHGKKGVMEKIKERLPGHH 165

[Close]

BLAST of CmaCh20G008280 vs. TAIR 10
Match: AT2G21490.1 (dehydrin LEA )

HSP 1 Score: 116.3 bits (290), Expect = 2.9e-26
Identity = 96/208 (46.15%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNP-VQLTDEFGNPVQLTG-VATTGSHPVGNPVQMSEEFGNP 60
           MA++RDE GNP+ LTD +GNP V LTDE GNP+ LTG V++T  H       ++E     
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAE----- 60

Query: 61  MHPTGVSTTG-SKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHD 120
            HPT  ST G + P   P             T    TG   VS+G       Q      +
Sbjct: 61  -HPT--STVGETHPAAAPAGAGA-------ATAATATG---VSAGTGATTTGQQHHGSLE 120

Query: 121 ASLARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKL-TGKHKEAGTTTTGAGHHQSTTV 180
             L RS SSSSSSSEDDGQGGRR  KK + +KIKEK  +GKHK+  T  T      +TT 
Sbjct: 121 EHLRRSGSSSSSSSEDDGQGGRR--KKSIKEKIKEKFGSGKHKDEQTPATA-----TTTG 180

Query: 181 TSTVDVEHQEHGKKGVLEKIKEKLPGHH 205
            +T D   Q H KKG+LEKIK+KLPGHH
Sbjct: 181 PATTD---QPHEKKGILEKIKDKLPGHH 180

[Close]

BLAST of CmaCh20G008280 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 )

HSP 1 Score: 84.7 bits (208), Expect = 9.2e-17
Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 77  QMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASLARSSSSSSSSSEDDGQ 136
           Q  ++ GNP      ATTG+   + G   V        G    L RS SSSSSSSEDDG 
Sbjct: 15  QQLDQFGNPF----PATTGAYGTAGGAPAVAE----GGGLSGMLHRSGSSSSSSSEDDGL 74

Query: 137 GGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTVDVEHQEHGKKGVLEKI 196
           GGRRRKKKG+T+KIKEKL G H    T++ G+    +TT   T  V H+   KKG++EKI
Sbjct: 75  GGRRRKKKGITEKIKEKLPGHHDSNKTSSLGS----TTTAYDTGTVHHE---KKGMMEKI 127

Query: 197 KEKLPGHH 205
           KEKLPG H
Sbjct: 135 KEKLPGGH 127

[Close]

BLAST of CmaCh20G008280 vs. TAIR 10
Match: AT5G66400.1 (Dehydrin family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14
Identity = 77/194 (39.69%), Postives = 92/194 (47.42%), Query Frame = 0


Query: 13  QLTDERGNPVQLT-DEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMHPTGVSTTGSKP 72
           Q TDE GNP+Q   DE+GNP+   G  T G    G      + +G     TG    GS  
Sbjct: 11  QATDEYGNPIQQQYDEYGNPMGGGGYGTGG----GGGATGGQGYG-----TGGQGYGSG- 70

Query: 73  VENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLRE---GHDASLARSSSSSS 132
                      G   + TG  T G      G    G+ Q  +E   G    L RS S SS
Sbjct: 71  -----GQGYGTGGQGYGTGTGTEGF-GTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSS 130

Query: 133 SSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTVDVEHQEHG 192
           SSSEDDGQGGRR  KKG+TQKIKEKL G H ++G      G               + H 
Sbjct: 131 SSSEDDGQGGRR--KKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGG---YGGEHHE 183

Query: 193 KKGVLEKIKEKLPG 203
           KKG+++KIKEKLPG
Sbjct: 191 KKGMMDKIKEKLPG 183

[Close]

BLAST of CmaCh20G008280 vs. TAIR 10
Match: AT4G39130.1 (Dehydrin family protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.3e-14
Identity = 73/204 (35.78%), Postives = 95/204 (46.57%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60
           MA+++DE GNP+ LTD  G P QL DEFGN + LTGVATT  H       + E       
Sbjct: 1   MADLKDERGNPIYLTDAHGEPAQLMDEFGNAMHLTGVATTVPH-------LKES------ 60

Query: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
               S TG  P+  PV        P H        ++P+S   D      PL++ HD   
Sbjct: 61  ----SYTGPHPITAPVTTT---NTPHH--------AQPISVSHD------PLQD-HDLRW 120

Query: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTV 180
                  +SS+E++G+G  R  K  +T + K KL G  K +  T TG+G           
Sbjct: 121 -----FGTSSTEENGEGVGR--KTNITDETKSKL-GVDKPSAATVTGSG----------- 148

Query: 181 DVEHQEHGKKGVLEKIKEKLPGHH 205
                 H KKG  +KIKEKL GHH
Sbjct: 181 --SGSVHEKKGFFKKIKEKLSGHH 148

[Close]

BLAST of CmaCh20G008280 vs. TAIR 10
Match: AT5G66400.2 (Dehydrin family protein )

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-12
Identity = 73/193 (37.82%), Postives = 89/193 (46.11%), Query Frame = 0


Query: 13  QLTDERGNPVQLT-DEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMHPTGVSTTGSKP 72
           Q TDE GNP+Q   DE+GNP+   G  T G    G      + +G     TG    GS  
Sbjct: 11  QATDEYGNPIQQQYDEYGNPMGGGGYGTGG----GGGATGGQGYG-----TGGQGYGSG- 70

Query: 73  VENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLRE--GHDASLARSSSSSSS 132
                      G   + TG  T G      G    G+ Q  +E  G    +   S S SS
Sbjct: 71  -----GQGYGTGGQGYGTGTGTEGF-GTGGGARHHGQEQLHKESGGGLGGMLHRSGSGSS 130

Query: 133 SSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTTGAGHHQSTTVTSTVDVEHQEHGK 192
           SS DDGQGGRR  KKG+TQKIKEKL G H ++G      G               + H K
Sbjct: 131 SSSDDGQGGRR--KKGITQKIKEKLPGHHDQSGQAQAMGGMGSGYDAGG---YGGEHHEK 182

Query: 193 KGVLEKIKEKLPG 203
           KG+++KIKEKLPG
Sbjct: 191 KGMMDKIKEKLPG 182

The following BLAST results are available for this feature:

BLAST of CmaCh20G008280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P21298	1.6e-29	45.93	Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1	[more]
Q96261	4.0e-25	46.15	Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1	[more]
Q07322	8.4e-23	35.81	Embryogenic cell protein 40 OS=Daucus carota OX=4039 GN=ECP40 PE=1 SV=1	[more]
P25863	1.3e-15	49.22	Dehydrin Xero 1 OS=Arabidopsis thaliana OX=3702 GN=XERO1 PE=2 SV=2	[more]
P30287	2.9e-15	35.45	Dehydrin Rab25 OS=Oryza sativa subsp. japonica OX=39947 GN=RAB25 PE=2 SV=2	[more]

BLAST of CmaCh20G008280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEI1	2.0e-107	100.00	late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1FTT6	2.7e-101	95.63	late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LPB7	6.6e-47	61.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249810 PE=3 SV=1	[more]
A0A1S3CDP4	2.4e-41	57.77	late embryogenesis abundant protein-like OS=Cucumis melo OX=3656 GN=LOC103499700...	[more]
A0A6J1CYY9	2.2e-34	52.11	late embryogenesis abundant protein-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CmaCh20G008280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986610.1	4.0e-107	100.00	late embryogenesis abundant protein-like [Cucurbita maxima]	[more]
XP_022944216.1	5.7e-101	95.63	late embryogenesis abundant protein-like [Cucurbita moschata] >KAG6571093.1 hypo...	[more]
XP_023513012.1	6.9e-99	94.63	late embryogenesis abundant protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_004150075.1	1.4e-46	61.65	embryogenic cell protein 40 [Cucumis sativus] >KGN61826.1 hypothetical protein C...	[more]
XP_038902143.1	2.4e-43	60.19	embryogenic cell protein 40-like isoform X1 [Benincasa hispida]	[more]

BLAST of CmaCh20G008280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21490.1	2.9e-26	46.15	dehydrin LEA	[more]
AT3G50980.1	9.2e-17	49.22	dehydrin xero 1	[more]
AT5G66400.1	1.5e-14	39.69	Dehydrin family protein	[more]
AT4G39130.1	4.3e-14	35.78	Dehydrin family protein	[more]
AT5G66400.2	1.1e-12	37.82	Dehydrin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 49..204 e-value: 2.8E-35 score: 122.2
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 46..204 coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..204
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..181
None	No IPR available	PANTHER	PTHR33346:SF5	DEHYDRIN XERO 2-RELATED	coord: 46..204
None	No IPR available	PANTHER	PTHR33346:SF5	DEHYDRIN XERO 2-RELATED	coord: 1..40
IPR030513	Dehydrin, conserved site	PROSITE	PS00823	DEHYDRIN_2	coord: 195..202
IPR030513	Dehydrin, conserved site	PROSITE	PS00315	DEHYDRIN_1	coord: 127..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G008280.1	CmaCh20G008280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
biological_process	GO:0009415	response to water
cellular_component	GO:0005829	cytosol