CmaCh20G006410 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G006410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr20: 2975866 .. 2977760 (-)
RNA-Seq Expression	CmaCh20G006410
Synteny	CmaCh20G006410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTTCCACAGAACCGTCGACGACGTCTTCGGAAACCGTAACGCTGGAAACTATACTGGACGAACTCCGGCTATGTCTATTAGAGCGGGCTGCTCGACTGCCCTCCGAACGAATAATCTCCTGTACGACAAAGTGTAAGAGCGAAGTTTTGCCGTCGGTTCCCTTAACATCCGCCAGTTTCAAGAGCGTATCGAGCTTGAACGCCTGAGCACCGCCACGGTACGTCCCGACATTCATACGATTGCCAGTTTTGAGAACTGCTTCTAGTAGCTTGAAAAATAGCCTGCTGTTTCTAAGATTTTTGCAGGCGACCTAACATTTATCAAGTAGTGGGTAAATTACATGCTGTGTTTCATAATGTGATTGTGTTTGATTTTGGATTTGAAAATACTTGCCTGTAGCGTAGCAAACGACTCCTTAATGCTAGCGACGTCTTCCGTCAATGAGAGCATGAAGAGAAGGCACTCCAATCGTTTAAAAGCAAAAGGAACGTTCACCAACACCTTCAGGAACCGTTCTGCTGGCCCTAGCTGAGAAAGGTCCCCTGAATATAATCTCAGTTTCAGCTCCTCTTCTGCTGTTGGTGCCATCTTCAACAAGGTCTGCATAAGCTCTGCTGGAAGATCAGGATTTCCTGGTACATAATTTGTTATAAACCCTCTGTTAGTTTCATGAATTAAACCAATTGTAGATTTTATTCTCTTATCAAATCACAAGCACAACACAAACACAAGAACAGAGAGATTGCCTTGTTGAATGGCATCCATAACTTCTTCTGTTGTCACATTCAGTGCCCGTAAGAGAATTGAAAGGTTTTGAGCTTTCCTAGGGTCGATGATTTGAATGTACTGTACTGAAGGTTCCGAAGCTAAATCTTTCTTGCGGTTGCCTTTGTTAGCTTCCACTGCTGCATATCCAAACAAGGACTCCATCATCTCCTCATTGAATCTGTCAATTTTGTAATATACATCAAATCCCTCTGCCGCATAGTAATTACTATTTAGAACTAAGAATTCAAGTAGGCTTACTGGAATGATCCATCACTAATCTCGTGCCAGACCATGGATTGTCCAGGGTTGGCAAGAACCTTATCCCAGAAAAAGGGCTTTAACTTGGTTTTATGGCCTAATGAATCAGGATCCATACTTGAGCCATTGGGTCCACCCTGATGTGGCGCCACAGGTGGTGCTTGAGGTTTACCAGGGATTGCCGCCGGTGGTGCAGGTGGGGGCCGAGAAACTTTCGGGGGTGATGGTGGTGGAGCTCTGGATGCAGGCGGAGGGGGTGGAGGTGCTGCATCAGGTGCTGTTGGAGGAGGAGGCTGAGCATCTGGTCTTTCAGGAGGGGGTTTTAGAGGCGGCATTGCTGATGATTTACCATCAGATGTTGGACCCTCAGCAATATAGGTACGGTTTTCAGGATTCACTGCTAAGTTGCCAACAAAAGAGGGTGGTGGTTTAGTTCCATTATTAGCGTTGAACTCGTTGGTTGCTGGATTTCCATCGCTGTATGCCTTCAGTGAAGAACCTGCTGGTAATTCACTCAAAGATATGTTGTTTAAAGGCTTCTCATTCTTTTGCCCATCCTTCGGCTCAACCTTGCTTCCCTTACCTCTACGACAGCAGAACAAAACCAGCGCAACCACAAGAACAATTCCCACACCAGCTGCTACAATACCAGCAATTATGCCCGTCCGGCTTTCTTCATGCTTCTTTGGCGGGCGAGACTTGGGAGAAGCTCGTGGAAGAGGTGGTGAGCGAGCTACAGTAGATGGAGGTGAATCCAAAACATCAGTGTCGCCCACTGGCGGTAGCAGTTCTGGCGACGGCGCCGGGGCCACAACAGTAGGAGAATTGGTTGGTGCATTACTTGGCGACAACATTGGAGCATGA

mRNA sequence

ATGATGTTCCACAGAACCGTCGACGACGTCTTCGGAAACCGTAACGCTGGAAACTATACTGGACGAACTCCGGCTATGTCTATTAGAGCGGGCTGCTCGACTGCCCTCCGAACGAATAATCTCCTGTACGACAAAGTTTTTGCCGTCGGTTCCCTTAACATCCGCCAGTTTCAAGAGCGTATCGAGCTTGAACGCCTGAGCACCGCCACGGATCCATACTTGAGCCATTGGGTCCACCCTGATGTGGCGCCACAGGTGGTGCTTGAGGTTTACCAGGGATTGCCGCCGGTGGTGCAGGTGGGGGCCGAGAAACTTTCGGGGGTGATGGTGGTGGAGCTCTGGATGCAGGCGGAGGGGGTGGAGGTGCTGCATCAGGTGCTGTTGGAGGAGGAGGCTGAGCATCTGGTCTTTCAGGAGGGGGTTTTAGAGGCGGCATTGCTGATGATTTACCATCAGATGTTGGACCCTCAGCAATATAGGTACGGATTCACTGCTAAGTTGCCAACAAAAGAGGGTGGTGGTTTAGTTCCATTATTAGCGTTGAACTCGTTGGTTGCTGGATTTCCATCGCTGTATGCCTTCAGTGAAGAACCTGCTGGTAATTCACTCAAAGATATGTTGTTTAAAGGCTTCTCATTCTTTTGCCCATCCTTCGGCTCAACCTTGCTTCCCTTACCTCTACGACAGCAGAACAAAACCAGCGCAACCACAAGAACAATTCCCACACCAGCTGCTACAATACCAGCAATTATGCCCGTCCGGCTTTCTTCATGCTTCTTTGGCGGGCGAGACTTGGGAGAAGCTCGTGGAAGAGGTGGTGAGCGAGCTACAGTAGATGGAGGTGAATCCAAAACATCAGTGTCGCCCACTGGCGGTAGCAGTTCTGGCGACGGCGCCGGGGCCACAACAGTAGGAGAATTGGTTGGTGCATTACTTGGCGACAACATTGGAGCATGA

Coding sequence (CDS)

ATGATGTTCCACAGAACCGTCGACGACGTCTTCGGAAACCGTAACGCTGGAAACTATACTGGACGAACTCCGGCTATGTCTATTAGAGCGGGCTGCTCGACTGCCCTCCGAACGAATAATCTCCTGTACGACAAAGTTTTTGCCGTCGGTTCCCTTAACATCCGCCAGTTTCAAGAGCGTATCGAGCTTGAACGCCTGAGCACCGCCACGGATCCATACTTGAGCCATTGGGTCCACCCTGATGTGGCGCCACAGGTGGTGCTTGAGGTTTACCAGGGATTGCCGCCGGTGGTGCAGGTGGGGGCCGAGAAACTTTCGGGGGTGATGGTGGTGGAGCTCTGGATGCAGGCGGAGGGGGTGGAGGTGCTGCATCAGGTGCTGTTGGAGGAGGAGGCTGAGCATCTGGTCTTTCAGGAGGGGGTTTTAGAGGCGGCATTGCTGATGATTTACCATCAGATGTTGGACCCTCAGCAATATAGGTACGGATTCACTGCTAAGTTGCCAACAAAAGAGGGTGGTGGTTTAGTTCCATTATTAGCGTTGAACTCGTTGGTTGCTGGATTTCCATCGCTGTATGCCTTCAGTGAAGAACCTGCTGGTAATTCACTCAAAGATATGTTGTTTAAAGGCTTCTCATTCTTTTGCCCATCCTTCGGCTCAACCTTGCTTCCCTTACCTCTACGACAGCAGAACAAAACCAGCGCAACCACAAGAACAATTCCCACACCAGCTGCTACAATACCAGCAATTATGCCCGTCCGGCTTTCTTCATGCTTCTTTGGCGGGCGAGACTTGGGAGAAGCTCGTGGAAGAGGTGGTGAGCGAGCTACAGTAGATGGAGGTGAATCCAAAACATCAGTGTCGCCCACTGGCGGTAGCAGTTCTGGCGACGGCGCCGGGGCCACAACAGTAGGAGAATTGGTTGGTGCATTACTTGGCGACAACATTGGAGCATGA

Protein sequence

MMFHRTVDDVFGNRNAGNYTGRTPAMSIRAGCSTALRTNNLLYDKVFAVGSLNIRQFQERIELERLSTATDPYLSHWVHPDVAPQVVLEVYQGLPPVVQVGAEKLSGVMVVELWMQAEGVEVLHQVLLEEEAEHLVFQEGVLEAALLMIYHQMLDPQQYRYGFTAKLPTKEGGGLVPLLALNSLVAGFPSLYAFSEEPAGNSLKDMLFKGFSFFCPSFGSTLLPLPLRQQNKTSATTRTIPTPAATIPAIMPVRLSSCFFGGRDLGEARGRGGERATVDGGESKTSVSPTGGSSSGDGAGATTVGELVGALLGDNIGA

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh20G006410 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh20G006410 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh20G006410 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh20G006410 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 281..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G006410.1	CmaCh20G006410.1	mRNA