CmaCh20G001430 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G001430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CSL zinc finger domain-containing protein
Location	Cma_Chr20: 699058 .. 701847 (+)
RNA-Seq Expression	CmaCh20G001430
Synteny	CmaCh20G001430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAACCACTCCGAAATCATTTTTCAAATCGCCCAAGGATAAAGAGTTTCCACTTCTTTCAATCCCGATTCCTCTGCTTTACATCCGCAAATCTAAAAGGCGTCTGGAAAGCTTCCAATAATGGCGACGGTGAGGGTCTTCGTAACAGTGCCGATGGAGCTTCTGCTCTTGCTAATGGCGCTGATGCTTCACTCAGAAGCTGTGAATACGAACAATGTATACCAACCTTGTGCGGACACCAAGATTCAGAGGTCTGACGGATTCACTTTCGGAATCGCTTTCTCTTCCAGGGACTCATTCTTCTTTAACCAGTCCCATCAGCTCTCGCCGTGTGACCGTCGTCTTTCTCTGGCATCGCTCAACTCACAGCTTGCTGTTTTCAGACCTCGAGTAGACGAGATCTCCCTTCTCTCCGTCAATACTTCCGATTTCTTTCCGGTACAAACTCGATCTTGATTTCATGATTCGGATTATTTCGAATACTCACTCAGATCAGTGTAGTTTCTAATTTGGTCGAAGTTTTTATTCCGGTTTTCCTTCCAGTTGTAGACGTTGGTAGAAGTAGGCTATATTCTTCTAGTTTTCACGTGGATTTAGCATAGGGATTCTTGATGTTACTTTATTCTTTGAATCGAACGGCCATCTTGTAACATCCTTTATTACTTGGTTGTATCTTTAGCAATCTATGAAACAGTGTCTTGTCTCTCAATATCAGATTGCTCGGTATGAGTTTAAAAACTTGTTTGACTAAATGTGTAGATCGGTAGTCTACTGGTTCTTCATCCTCGCTTCCCTCTCTTGGTTGGTTTTAACTTCGTAATATATGGCGCAATGTTTTGCCTCTCAGTGTCAGATTACTTGTTATGAGTTTATTGTTTGATGAGACGTTCTCATGGAGACAATTAGATAGATAGCACCTTCACGTGATTCGTTCTTGCTTCCATCTCTTAGTCGGTTATAAGCTTGCAATCTATGCCACTGAGTCTTGTCTCTCAATGACCGGTTACTTGGTATGCTTATCAGATCTCGTTTGAGGAAATGTGTTCATAGAGGGGACTGGATAAGTTTTTGTACTCTCCACGTCTGTGCTTAGCAGATCAGTATTCATATGGCATTTATAGAATGATGAAGCTTTACAGTTATGTAATGGCCCCTGATTAATCAAATGTCGAATCTGACTTGAATGCATCCCTAATTGCTAAAGAAGAATTCCCTGCTTAATGCAACATCACTATAAGTAACAGAAATAGCCATAATTCTTGATGCCTCGCTATTTCCAGGATACTTTTGGTGGTTACATGGTGGCATTTGCTGGAAGAAAGTATGCTGCAAGGTCTCAGCCTGCCTTTGTCGCTAATGGCACATTCATAGTGACGAGTTTCACCCTGGTAAGATTTAAAATCTCTGCAAGTAGATGCTAGAGAAGTTGTAGGTTTTGTTAGAAATAAAATTAAGCTGATGAATTCACATAATCTAATGAATGAAATCGATTTTGGTGAGAGCAGGTACTTGAATTTCAGAAGGGCAGGCTGCAGAACTTGTACTGGAAGAGAGATGGATGTGCTTCGTGCTCAGGCAAGTCCAGATCTAGTTATGTCTGCCTTAACAATCAGGATTGTGCCATCAGAACATCAAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAACTGACGTTTTCAGGCACAGATAAGCATCTTGCAGCGCTAAACACCTGGTATGAAGTAAAAAACCTTCGACAATATTCCCTCTATAGTGTTTATTCAAATCTCATGGATTCTCTTACTGGTCAGTATAATAGGTTCTTCTAATTAGTTATTCATCATACTCCTCTCAAGGTCTGTCTTTGGTCTATAACTTCTATACATTTTACTGTTTGTCATGGGCTCCCTGCTTGGCTTTGATATCCATCCTTTTGCGGCCCCCTTTGCTTTGTATGAGACATCCCATTTGAAAAAACTATTTGAACCAATTACTACCATTTAACATAAACTCCTGCTGCTTTGTTTTGGGAAATGCTTACTGAAATTATATGGGATATATTTGATTATGAATTCACAAGCAGTTTATGAAAATGTAAGTTGAGAACAAGAAATTTGTAACCGTCCAAGCCTACCGTTTAGCGGATATTATCTCTTTGAGCTTTCCCTTTTGGGTTTTCCTTCAAAGTTTTAAAAACGTATCAGCTAAGTTGATGTTTTCACTCTTTTATAAAGATTGTTTCATTCCCAACCAATTTGGGATCTCACAAAATTGATCAGGAGTGTTGGTTGGTGGAGAACAACTAAAAGTTTGTTTTTGTGTTCTCAAACTTGTACATTTGCTTTATATTTCCTCTTCCATCTTTTTCTCTCTGCCATTTTTCAATCTTGTAGTGTATTAAGTTGATTGGTTTTGAAGGCTATCTCAGTTTTCTTCTTCTTCTTCTTCTTCTTCACTTGACTATTTTGATTTGTATTGAATGTCCTATGAAGATTGAAGAAATAGTGTGCTTTCCTGGTTTAGTTGATTGGAATTGAGTGTCCTATGAAGTTGGGTGCCGGCGGCATCTGTTTAGTAAGGAGGTTACTACAAGTTTGCTAAATATATAAGCTATAGAACTCAGTTTTTGAAGTGTACACATAGAACTGCCTGCTAACTTTTATAAACTATAAGCTCGTAATACTTCCTCGGAACCAAACAAAATTTAATTCTCATTTAATAAGCCACCACTCTTAGGTGGAATCATCGAACTCTAGAACTATAATTAGAATTATATTTTCAAATAGGGCGGAGTAG

mRNA sequence

CAAAACCACTCCGAAATCATTTTTCAAATCGCCCAAGGATAAAGAGTTTCCACTTCTTTCAATCCCGATTCCTCTGCTTTACATCCGCAAATCTAAAAGGCGTCTGGAAAGCTTCCAATAATGGCGACGGTGAGGGTCTTCGTAACAGTGCCGATGGAGCTTCTGCTCTTGCTAATGGCGCTGATGCTTCACTCAGAAGCTGTGAATACGAACAATGTATACCAACCTTGTGCGGACACCAAGATTCAGAGGTCTGACGGATTCACTTTCGGAATCGCTTTCTCTTCCAGGGACTCATTCTTCTTTAACCAGTCCCATCAGCTCTCGCCGTGTGACCGTCGTCTTTCTCTGGCATCGCTCAACTCACAGCTTGCTGTTTTCAGACCTCGAGTAGACGAGATCTCCCTTCTCTCCGTCAATACTTCCGATTTCTTTCCGGATACTTTTGGTGGTTACATGGTGGCATTTGCTGGAAGAAAGTATGCTGCAAGGTCTCAGCCTGCCTTTGTCGCTAATGGCACATTCATAGTGACGAGTTTCACCCTGGTACTTGAATTTCAGAAGGGCAGGCTGCAGAACTTGTACTGGAAGAGAGATGGATGTGCTTCGTGCTCAGGCAAGTCCAGATCTAGTTATGTCTGCCTTAACAATCAGGATTGTGCCATCAGAACATCAAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAACTGACGTTTTCAGGCACAGATAAGCATCTTGCAGCGCTAAACACCTGGTATGAAGTAAAAAACCTTCGACAATATTCCCTCTATAGTGTTTATTCAAATCTCATGGATTCTCTTACTGGTCAGTATAATAGGGCGGAGTAG

Coding sequence (CDS)

ATGGCGACGGTGAGGGTCTTCGTAACAGTGCCGATGGAGCTTCTGCTCTTGCTAATGGCGCTGATGCTTCACTCAGAAGCTGTGAATACGAACAATGTATACCAACCTTGTGCGGACACCAAGATTCAGAGGTCTGACGGATTCACTTTCGGAATCGCTTTCTCTTCCAGGGACTCATTCTTCTTTAACCAGTCCCATCAGCTCTCGCCGTGTGACCGTCGTCTTTCTCTGGCATCGCTCAACTCACAGCTTGCTGTTTTCAGACCTCGAGTAGACGAGATCTCCCTTCTCTCCGTCAATACTTCCGATTTCTTTCCGGATACTTTTGGTGGTTACATGGTGGCATTTGCTGGAAGAAAGTATGCTGCAAGGTCTCAGCCTGCCTTTGTCGCTAATGGCACATTCATAGTGACGAGTTTCACCCTGGTACTTGAATTTCAGAAGGGCAGGCTGCAGAACTTGTACTGGAAGAGAGATGGATGTGCTTCGTGCTCAGGCAAGTCCAGATCTAGTTATGTCTGCCTTAACAATCAGGATTGTGCCATCAGAACATCAAGTTGTAGAAACCGAGGGGGCAATGTGGATTGTAGTCTGGGAATACAACTGACGTTTTCAGGCACAGATAAGCATCTTGCAGCGCTAAACACCTGGTATGAAGTAAAAAACCTTCGACAATATTCCCTCTATAGTGTTTATTCAAATCTCATGGATTCTCTTACTGGTCAGTATAATAGGGCGGAGTAG

Protein sequence

MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLTGQYNRAE

Homology

[Close]

BLAST of CmaCh20G001430 vs. ExPASy TrEMBL
Match: A0A6J1JBU3 (uncharacterized protein LOC111484349 OS=Cucurbita maxima OX=3661 GN=LOC111484349 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.7e-134
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60
           MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF
Sbjct: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60

Query: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120
           FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK
Sbjct: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120

Query: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180
           YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC
Sbjct: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180

Query: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240
           AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240

Query: 241 GQYNR 246
           GQYNR
Sbjct: 241 GQYNR 245

[Close]

BLAST of CmaCh20G001430 vs. ExPASy TrEMBL
Match: A0A6J1FS19 (uncharacterized protein LOC111448296 OS=Cucurbita moschata OX=3662 GN=LOC111448296 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.7e-134
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60
           MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF
Sbjct: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60

Query: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120
           FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK
Sbjct: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120

Query: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180
           YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC
Sbjct: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180

Query: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240
           AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240

Query: 241 GQYNR 246
           GQYNR
Sbjct: 241 GQYNR 245

[Close]

BLAST of CmaCh20G001430 vs. ExPASy TrEMBL
Match: A0A6J1DHN7 (uncharacterized protein LOC111020583 OS=Momordica charantia OX=3673 GN=LOC111020583 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.0e-126
Identity = 227/245 (92.65%), Postives = 238/245 (97.14%), Query Frame = 0


Query: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60
           MAT+RVFVT PMELLLLL+AL+LHSEA NTNNVYQPCADTKIQRSDGF+FGIAFSSRDSF
Sbjct: 1   MATMRVFVTAPMELLLLLVALLLHSEAANTNNVYQPCADTKIQRSDGFSFGIAFSSRDSF 60

Query: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120
           FFNQSHQLSPCDRRLSL SLNSQLAVFRPRVDEISLL++NTSDFFPD+FGGYMVAFAGRK
Sbjct: 61  FFNQSHQLSPCDRRLSLPSLNSQLAVFRPRVDEISLLTINTSDFFPDSFGGYMVAFAGRK 120

Query: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180
           YAARSQPAFVAN TFIVTSFTLVLEF+KGRLQNL+WKRDGC+SCSGKSRSSYVCLNNQDC
Sbjct: 121 YAARSQPAFVANSTFIVTSFTLVLEFEKGRLQNLFWKRDGCSSCSGKSRSSYVCLNNQDC 180

Query: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240
           AIRTSSCRNRGG VDCSLGIQLTFSGTDKHL ALN+WYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 181 AIRTSSCRNRGGTVDCSLGIQLTFSGTDKHLTALNSWYEVKNLRQYSLYSVYSNLMDSLT 240

Query: 241 GQYNR 246
            QYNR
Sbjct: 241 SQYNR 245

[Close]

BLAST of CmaCh20G001430 vs. ExPASy TrEMBL
Match: A0A1S3BNB9 (uncharacterized protein LOC103491438 OS=Cucumis melo OX=3656 GN=LOC103491438 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 2.5e-125
Identity = 230/248 (92.74%), Postives = 238/248 (95.97%), Query Frame = 0


Query: 1   MATVRVFVTVPMELLLLL---MALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSR 60
           MATVRVFVT+PM+LLLLL   + L++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSR
Sbjct: 1   MATVRVFVTMPMKLLLLLLMVLILVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSR 60

Query: 61  DSFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFA 120
           DSFF NQSHQLSPCDRRLSLASLNSQLAVFRPRVD+ISLLS+NTSDFFPD FGGYMVAFA
Sbjct: 61  DSFFSNQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFA 120

Query: 121 GRKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180
           GRKYAARSQPAFVAN TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN
Sbjct: 121 GRKYAARSQPAFVANNTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNN 180

Query: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMD 240
           QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALN+WYEVKNLRQYSLYSVYSNL D
Sbjct: 181 QDCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLRD 240

Query: 241 SLTGQYNR 246
           SLT QYNR
Sbjct: 241 SLTSQYNR 248

[Close]

BLAST of CmaCh20G001430 vs. ExPASy TrEMBL
Match: A0A0A0KEG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426900 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 7.3e-125
Identity = 228/247 (92.31%), Postives = 238/247 (96.36%), Query Frame = 0


Query: 1   MATVRVFVTVPMELLLLLMAL--MLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRD 60
           MATVR+F T+P +LLLLLMAL  ++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSRD
Sbjct: 14  MATVRLFATLPKKLLLLLMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRD 73

Query: 61  SFFFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAG 120
           SFF NQSHQLSPCDRRLSLASLNSQLAVFRPRVD+ISLLS+NTSDFFPD FGGYMVAFAG
Sbjct: 74  SFFANQSHQLSPCDRRLSLASLNSQLAVFRPRVDQISLLSINTSDFFPDAFGGYMVAFAG 133

Query: 121 RKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 180
           RKYAARSQPAFVAN TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ
Sbjct: 134 RKYAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQ 193

Query: 181 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDS 240
           DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHL+ALN+WYEVKNLRQYSLY+VYSNL DS
Sbjct: 194 DCAIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDS 253

Query: 241 LTGQYNR 246
           LTGQYNR
Sbjct: 254 LTGQYNR 260

[Close]

BLAST of CmaCh20G001430 vs. NCBI nr
Match: XP_022943561.1 (uncharacterized protein LOC111448296 [Cucurbita moschata] >XP_022986661.1 uncharacterized protein LOC111484349 [Cucurbita maxima])

HSP 1 Score: 488.4 bits (1256), Expect = 3.6e-134
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60
           MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF
Sbjct: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60

Query: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120
           FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK
Sbjct: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120

Query: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180
           YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC
Sbjct: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180

Query: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240
           AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240

Query: 241 GQYNR 246
           GQYNR
Sbjct: 241 GQYNR 245

[Close]

BLAST of CmaCh20G001430 vs. NCBI nr
Match: KAG7010325.1 (hypothetical protein SDJN02_27118 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 487.3 bits (1253), Expect = 8.0e-134
Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60
           MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF
Sbjct: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60

Query: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120
           FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK
Sbjct: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120

Query: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180
           YAARSQPAFVANGTFIVTSFTLVLEFQKG+LQNLYWKRDGCASCSGKSRSSYVCLNNQDC
Sbjct: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGKLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180

Query: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240
           AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240

Query: 241 GQYNR 246
           GQYNR
Sbjct: 241 GQYNR 245

[Close]

BLAST of CmaCh20G001430 vs. NCBI nr
Match: XP_023511823.1 (uncharacterized protein LOC111776727 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 484.6 bits (1246), Expect = 5.2e-133
Identity = 242/245 (98.78%), Postives = 244/245 (99.59%), Query Frame = 0


Query: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60
           MAT RVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF
Sbjct: 1   MATARVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60

Query: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120
           FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDF+PDTFGGYMVAFAGRK
Sbjct: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFYPDTFGGYMVAFAGRK 120

Query: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180
           YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC
Sbjct: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180

Query: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240
           AIRTS+CRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 181 AIRTSNCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240

Query: 241 GQYNR 246
           GQYNR
Sbjct: 241 GQYNR 245

[Close]

BLAST of CmaCh20G001430 vs. NCBI nr
Match: XP_038900700.1 (uncharacterized protein LOC120087841 [Benincasa hispida])

HSP 1 Score: 465.7 bits (1197), Expect = 2.5e-127
Identity = 231/245 (94.29%), Postives = 239/245 (97.55%), Query Frame = 0


Query: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60
           +AT+R FVTVPM+LLLLLM L++HSEA NTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF
Sbjct: 31  VATMRFFVTVPMKLLLLLMPLIVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 90

Query: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120
           F NQSHQLSPCDRRLSLA+LNSQLAVFRPRVDEISLLS+NTSDFFPD FGGYMVAFAGRK
Sbjct: 91  FSNQSHQLSPCDRRLSLAALNSQLAVFRPRVDEISLLSINTSDFFPDAFGGYMVAFAGRK 150

Query: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180
           YAARSQPAFVAN TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC
Sbjct: 151 YAARSQPAFVANSTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 210

Query: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240
           AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALN+WYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 211 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNSWYEVKNLRQYSLYSVYSNLMDSLT 270

Query: 241 GQYNR 246
           GQYNR
Sbjct: 271 GQYNR 275

[Close]

BLAST of CmaCh20G001430 vs. NCBI nr
Match: XP_022152979.1 (uncharacterized protein LOC111020583 [Momordica charantia])

HSP 1 Score: 461.1 bits (1185), Expect = 6.1e-126
Identity = 227/245 (92.65%), Postives = 238/245 (97.14%), Query Frame = 0


Query: 1   MATVRVFVTVPMELLLLLMALMLHSEAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSF 60
           MAT+RVFVT PMELLLLL+AL+LHSEA NTNNVYQPCADTKIQRSDGF+FGIAFSSRDSF
Sbjct: 1   MATMRVFVTAPMELLLLLVALLLHSEAANTNNVYQPCADTKIQRSDGFSFGIAFSSRDSF 60

Query: 61  FFNQSHQLSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRK 120
           FFNQSHQLSPCDRRLSL SLNSQLAVFRPRVDEISLL++NTSDFFPD+FGGYMVAFAGRK
Sbjct: 61  FFNQSHQLSPCDRRLSLPSLNSQLAVFRPRVDEISLLTINTSDFFPDSFGGYMVAFAGRK 120

Query: 121 YAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDC 180
           YAARSQPAFVAN TFIVTSFTLVLEF+KGRLQNL+WKRDGC+SCSGKSRSSYVCLNNQDC
Sbjct: 121 YAARSQPAFVANSTFIVTSFTLVLEFEKGRLQNLFWKRDGCSSCSGKSRSSYVCLNNQDC 180

Query: 181 AIRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLT 240
           AIRTSSCRNRGG VDCSLGIQLTFSGTDKHL ALN+WYEVKNLRQYSLYSVYSNLMDSLT
Sbjct: 181 AIRTSSCRNRGGTVDCSLGIQLTFSGTDKHLTALNSWYEVKNLRQYSLYSVYSNLMDSLT 240

Query: 241 GQYNR 246
            QYNR
Sbjct: 241 SQYNR 245

[Close]

BLAST of CmaCh20G001430 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 356.7 bits (914), Expect = 1.5e-98
Identity = 169/216 (78.24%), Postives = 190/216 (87.96%), Query Frame = 0


Query: 29  NTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFFNQSHQLSPCDRRLSLASLNSQLAVFR 88
           NTN +Y PC+DT+IQRSDGFTFGIAFSSR SFF NQ+  LSPCDRRLSLA++NSQ +VFR
Sbjct: 30  NTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSVFR 89

Query: 89  PRVDEISLLSVNTSDFFPDTFGGYMVAFAGRKYAARSQPAFVANGTFIVTSFTLVLEFQK 148
           P++DEISLLS+NTS FFPD +GGYMVAFAGRKYAARS PAF+AN TFIVTSFTLV+EFQK
Sbjct: 90  PKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEFQK 149

Query: 149 GRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTSSCRNRGGNVDCSLGIQLTFSGTD 208
           GRLQNLYWKRDGCASC G    ++VCLN QDCAIRT SC+ RGG VDCSLGIQL FSGTD
Sbjct: 150 GRLQNLYWKRDGCASCKG--NQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFSGTD 209

Query: 209 KHLAALNTWYEVKNLRQYSLYSVYSNLMDSLTGQYN 245
           KHLA LN+WYEV+NL+QYSLY +YSNL  SLT Q+N
Sbjct: 210 KHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFN 243

[Close]

BLAST of CmaCh20G001430 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 282.3 bits (721), Expect = 3.6e-76
Identity = 145/239 (60.67%), Postives = 180/239 (75.31%), Query Frame = 0


Query: 14  LLLLLMALMLHS---EAVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFF---NQSHQ 73
           LL  L A +L S   EA + N VY PC+D+ +   DGFTFGIAF+++DSFF    ++S Q
Sbjct: 6   LLCCLFAAVLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQ 65

Query: 74  LSPCDRRLSLASLNSQLAVFRPRVDEISLLSVNT---SDFFPDTFGGYMVAFAGRKYAAR 133
            SPCD R    + NS++AVFRP+VDEI+LL++NT   S F PD   GYMVAFAG KYAAR
Sbjct: 66  YSPCDHRHLSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAAR 125

Query: 134 SQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRT 193
           S P  VA+   IVTSFTLVLEFQKGRL+N++WK+DGC+ CSG S+  +VCLN ++CAI+ 
Sbjct: 126 SLPIMVADSNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSK--FVCLNKEECAIKP 185

Query: 194 SSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLTGQY 244
            +C+N+GG VDCSLGIQL FSGTDKH  ALN+WYEV NL+QYSLY +YSNL DSLT  +
Sbjct: 186 QNCKNQGGQVDCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPF 242

[Close]

BLAST of CmaCh20G001430 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-70
Identity = 133/240 (55.42%), Postives = 174/240 (72.50%), Query Frame = 0


Query: 14  LLLLLMALMLHSE---AVNTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFFNQSHQLSP 73
           +++++M +M+  +   A + N VY PC+DT+I + DGFT GIA SS+++FF +Q  QLSP
Sbjct: 126 IMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQV-QLSP 185

Query: 74  CDRRLSLASLNSQLAVFRPRVDEISLLSVNTSDFFPDTFGGYMVAFAGRKYAARSQPAFV 133
           CD RL LA+  +QLA+FRP+VDEISLLS++TS F P   GG+MV FAG KYAARS P  V
Sbjct: 186 CDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVKV 245

Query: 134 ANGTFIVTSFT---------LVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCA 193
           A+G+  +T+FT         LVLEFQKG LQNL+WK  GC  C G   SS VCLN  DCA
Sbjct: 246 ADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCA 305

Query: 194 IRTSSCRNRGGNVDCSLGIQLTFSGTDKHLAALNTWYEVKNLRQYSLYSVYSNLMDSLTG 242
           + TS C+  GG  +C++GIQ+ FSGTD++L +LNTWYEV NLRQYSL  +Y+N +DSL+G
Sbjct: 306 VPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLSG 364

[Close]

BLAST of CmaCh20G001430 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.6 bits (179), Expect = 2.6e-13
Identity = 34/51 (66.67%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 112 YMVAFAGRKYAARSQPAFVANGTFIVTSFTLVLEFQKGRLQNLYWKRDGCA 163
           Y V   G +  +   PAF+AN TFIVTSFT V+EFQKGRLQNLYWKRD CA
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCA 52

The following BLAST results are available for this feature:

BLAST of CmaCh20G001430 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh20G001430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBU3	1.7e-134	100.00	uncharacterized protein LOC111484349 OS=Cucurbita maxima OX=3661 GN=LOC111484349...	[more]
A0A6J1FS19	1.7e-134	100.00	uncharacterized protein LOC111448296 OS=Cucurbita moschata OX=3662 GN=LOC1114482...	[more]
A0A6J1DHN7	3.0e-126	92.65	uncharacterized protein LOC111020583 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A1S3BNB9	2.5e-125	92.74	uncharacterized protein LOC103491438 OS=Cucumis melo OX=3656 GN=LOC103491438 PE=...	[more]
A0A0A0KEG2	7.3e-125	92.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G426900 PE=4 SV=1	[more]

BLAST of CmaCh20G001430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943561.1	3.6e-134	100.00	uncharacterized protein LOC111448296 [Cucurbita moschata] >XP_022986661.1 unchar...	[more]
KAG7010325.1	8.0e-134	99.59	hypothetical protein SDJN02_27118 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023511823.1	5.2e-133	98.78	uncharacterized protein LOC111776727 [Cucurbita pepo subsp. pepo]	[more]
XP_038900700.1	2.5e-127	94.29	uncharacterized protein LOC120087841 [Benincasa hispida]	[more]
XP_022152979.1	6.1e-126	92.65	uncharacterized protein LOC111020583 [Momordica charantia]	[more]

BLAST of CmaCh20G001430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44150.1	1.5e-98	78.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11800.1	3.6e-76	60.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15910.1	2.3e-70	55.42	CSL zinc finger domain-containing protein	[more]
AT3G48630.1	2.6e-13	66.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 10..245
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 10..245

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G001430.1	CmaCh20G001430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding