CmaCh19G010390 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G010390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like
Location	Cma_Chr19: 8822759 .. 8823739 (-)
RNA-Seq Expression	CmaCh19G010390
Synteny	CmaCh19G010390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCATCCAAAACTGATTAGTAGTGGAATCCGTTTCTGCCATCTCCGTAACGGTCACCTCCCCTGTTCCCTCTTAAACCCCCCTTTGTTTTCTCTCTCTAAAGCCCCCAATCTCCAAATCTCCAAATCTCCAAATCTCTCTCTCTCTCCTCCCGATCTCCCCGTCAAAAAATGGCCAATAATTTTGCGCTCTTTCTTCTCATTCTTCTGATTCTCGGCAGCAGCGCGGCGGAGTCCCGGCAGCCATCCACCAGGAACCAAAGCGGCGCGACGGATCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCTTCTCTGCAATCCGCCCTCGACTGGGCCTGCGGCGCCGGCGGTGCCGACTGTTCACCAATCCAGCCCGGTGGCGCATGCTACGACGCATCCAACGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCGTAAGCACGGCATGACCGACGACAGTTGCTTCTTCCAAAACGCCGCTGCTATCACCTCCTTAAACCCTAGTCTGTTTCTTCACTCCGATCTCTCAGTTTCTTAACCGAATCTGTTTTTTAGTTCAAAACCTTTCCAGATCTGTAACTGAAATGCTATTTGAATTTGTGTTCTGATTTTGATCTCTCTTGTTTTCAGGCTACGGAAGTTGCAGAATCCCAGCTAGGTAAATTTCATTGTTGATCTTTAAAACCTAGTAATCAAGAAAAATAATGTGGATCATGGTTGAAATCATCATCCACCAATGATTCTGCAATTATTTTTCTTCTTTTTTTAGTTTTAATTGGATTTGATTTCTCATTTTATGGCGCAGTTCGTTGAGAAATGGGAACTTTCCAAGCCAGACACCATCGGTAGGGCTGGGGCCGAGTGAAGACATAAGCGGGTCGGGTCGGAAATCGGGCCGGTCATGGGTTTGGCCAATGGTAATCGGGTATTTGTTTTTTAGAATTGTGTTTCAATCTCAAATAGGAAGCCCTAG

mRNA sequence

TCATCCAAAACTGATTAGTAGTGGAATCCGTTTCTGCCATCTCCGTAACGGTCACCTCCCCTGTTCCCTCTTAAACCCCCCTTTGTTTTCTCTCTCTAAAGCCCCCAATCTCCAAATCTCCAAATCTCCAAATCTCTCTCTCTCTCCTCCCGATCTCCCCGTCAAAAAATGGCCAATAATTTTGCGCTCTTTCTTCTCATTCTTCTGATTCTCGGCAGCAGCGCGGCGGAGTCCCGGCAGCCATCCACCAGGAACCAAAGCGGCGCGACGGATCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCTTCTCTGCAATCCGCCCTCGACTGGGCCTGCGGCGCCGGCGGTGCCGACTGTTCACCAATCCAGCCCGGTGGCGCATGCTACGACGCATCCAACGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCGTAAGCACGGCATGACCGACGACAGTTGCTTCTTCCAAAACGCCGCTGCTATCACCTCCTTAAACCCTAGCTACGGAAGTTGCAGAATCCCAGCTAGTTCGTTGAGAAATGGGAACTTTCCAAGCCAGACACCATCGGTAGGGCTGGGGCCGAGTGAAGACATAAGCGGGTCGGGTCGGAAATCGGGCCGGTCATGGGTTTGGCCAATGAATTGTGTTTCAATCTCAAATAGGAAGCCCTAG

Coding sequence (CDS)

ATGGCCAATAATTTTGCGCTCTTTCTTCTCATTCTTCTGATTCTCGGCAGCAGCGCGGCGGAGTCCCGGCAGCCATCCACCAGGAACCAAAGCGGCGCGACGGATCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCTTCTCTGCAATCCGCCCTCGACTGGGCCTGCGGCGCCGGCGGTGCCGACTGTTCACCAATCCAGCCCGGTGGCGCATGCTACGACGCATCCAACGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCGTAAGCACGGCATGACCGACGACAGTTGCTTCTTCCAAAACGCCGCTGCTATCACCTCCTTAAACCCTAGCTACGGAAGTTGCAGAATCCCAGCTAGTTCGTTGAGAAATGGGAACTTTCCAAGCCAGACACCATCGGTAGGGCTGGGGCCGAGTGAAGACATAAGCGGGTCGGGTCGGAAATCGGGCCGGTCATGGGTTTGGCCAATGAATTGTGTTTCAATCTCAAATAGGAAGCCCTAG

Protein sequence

MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCRIPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPMNCVSISNRKP

Homology

[Close]

BLAST of CmaCh19G010390 vs. ExPASy Swiss-Prot
Match: Q9M2K6 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2)

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-32
Identity = 75/152 (49.34%), Postives = 100/152 (65.79%), Query Frame = 0


Query: 10  LILLILGSSAAESRQPSTRNQSG---ATDLWCVAKNNADDASLQSALDWACGAGGADCSP 69
           L L IL ++AA     +T    G     +LWCVAKNNA+D+SLQ+A++WACG GGADC P
Sbjct: 11  LRLSILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGP 70

Query: 70  IQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCRIPASSL 129
           IQ GG C D ++VQ MASF FN+Y+ K+G  D++C F N AA+TSLNPS G+C+ P+S  
Sbjct: 71  IQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPSSKG 130

Query: 130 RNGNFPSQTPSVGLGPSEDISGSGRKSGRSWV 159
            N    +   S+G G + D+S  GR    SW+
Sbjct: 131 ANNGRLADDTSMGAGQA-DMSRGGRPISSSWM 161

[Close]

BLAST of CmaCh19G010390 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 100.1 bits (248), Expect = 2.5e-20
Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 37  WCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGM 96
           +C+A +  D  +LQ+ALDWACG G ++CS IQPG +CY  +NV+  ASFAFN Y++K G 
Sbjct: 381 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 440

Query: 97  TDDSCFFQNAAAITSLNPSYGSCRIPAS 125
              SC F+  A IT+ +PS+GSC  P S
Sbjct: 441 ASGSCDFKGVAMITTTDPSHGSCIFPGS 468

[Close]

BLAST of CmaCh19G010390 vs. ExPASy Swiss-Prot
Match: Q94CD8 (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18
Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 34  TDLWCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRK 93
           + ++CVAK +ADD  L   L+WACG G A+C+ IQPG  CY  ++V++ ASFAFNDY++K
Sbjct: 359 SSMFCVAKADADDDKLVDGLNWACGQGRANCAAIQPGQPCYLPNDVKSHASFAFNDYYQK 418

Query: 94  HGMTDDSCFFQNAAAITSLNPSYGSCRIPAS---SLRNGNFPSQTPSVGLGPSEDISGS 150
                 +C F   A  T+ +PSY +C    S   +  NGNFP       LGP+  + G+
Sbjct: 419 MKSAGGTCDFDGTAITTTRDPSYRTCAYTGSLNANATNGNFPPD----ALGPASPLGGN 473

[Close]

BLAST of CmaCh19G010390 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 3.1e-18
Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 15  LGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACY 74
           L  S++ S+ PS +  S     WCV K  A +  LQ++LDWACG  G DC  IQPGGAC+
Sbjct: 345 LAKSSSSSQTPSGKVTSSG---WCVPKKGATNEELQASLDWACG-HGIDCGAIQPGGACF 404

Query: 75  DASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCRIP 123
           + +NV + A++A N YF+K       C F   A +TS NPSY +C  P
Sbjct: 405 EPNNVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYP 448

[Close]

BLAST of CmaCh19G010390 vs. ExPASy Swiss-Prot
Match: Q9C7U5 (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 4.4e-17
Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 0


Query: 2   ANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAGG 61
           AN   +++L L   GS  A      T NQ+     +C A+  AD   LQ+ALDWACG G 
Sbjct: 342 ANGEPVYVLRLTNSGSVLAN----DTTNQT-----YCTAREGADTKMLQAALDWACGPGK 401

Query: 62  ADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCRI 121
            DCSPI+ G  CY+  NV   A++AF+ Y+ + G   D+C F   A+IT+ +PS+G+C +
Sbjct: 402 IDCSPIKQGETCYEPDNVVAHANYAFDTYYHQTGNNPDACNFNGVASITTTDPSHGTC-V 459

Query: 122 PASSLRNG 130
            A S  NG
Sbjct: 462 FAGSRGNG 459

[Close]

BLAST of CmaCh19G010390 vs. ExPASy TrEMBL
Match: A0A6J1HZS5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita maxima OX=3661 GN=LOC111468407 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.1e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120

Query: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 162
           IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM
Sbjct: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 161

[Close]

BLAST of CmaCh19G010390 vs. ExPASy TrEMBL
Match: A0A6J1GMC7 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455276 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.3e-84
Identity = 157/161 (97.52%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTR+QSGAT+LWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYG+CR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 162
           IPASSLRNGNF SQTPSVGLGPSEDISGSGRKSGRSWVWPM
Sbjct: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRSWVWPM 161

[Close]

BLAST of CmaCh19G010390 vs. ExPASy TrEMBL
Match: A0A6J1JNE0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486269 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.8e-69
Identity = 132/161 (81.99%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60
           M  NFALFLLI+ IL  SAAE + PS + Q GAT+LWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MPINFALFLLIVPIL-CSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120
           GADCSPIQP GACYDASNVQNMASFAFNDYF KHGMTDDSCFFQN+AA+TSLNPSYG+CR
Sbjct: 61  GADCSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAVTSLNPSYGNCR 120

Query: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 162
            P+SSLRNGNF SQ+ SVGLGPSED+SGSGR+S R WVWP+
Sbjct: 121 FPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRRSSRIWVWPI 160

[Close]

BLAST of CmaCh19G010390 vs. ExPASy TrEMBL
Match: A0A6J1JLF2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486269 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.8e-69
Identity = 132/161 (81.99%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60
           M  NFALFLLI+ IL  SAAE + PS + Q GAT+LWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MPINFALFLLIVPIL-CSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120
           GADCSPIQP GACYDASNVQNMASFAFNDYF KHGMTDDSCFFQN+AA+TSLNPSYG+CR
Sbjct: 61  GADCSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAVTSLNPSYGNCR 120

Query: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 162
            P+SSLRNGNF SQ+ SVGLGPSED+SGSGR+S R WVWP+
Sbjct: 121 FPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRRSSRIWVWPI 160

[Close]

BLAST of CmaCh19G010390 vs. ExPASy TrEMBL
Match: A0A6J1EY09 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437228 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.2e-67
Identity = 130/161 (80.75%), Postives = 143/161 (88.82%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60
           M  + ALFLLI LI+  SAAE + PS + Q GAT+LWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MEIDLALFLLIALII-CSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120
           G+DCSPIQP GACYDAS+VQ MASFAFNDYF KHGMTDDSCFFQN+AAITSLNPSYG+CR
Sbjct: 61  GSDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 162
            P+SSLRNGNF SQ+ SVGLGPSED+SGSGRKSGR WVWP+
Sbjct: 121 FPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPI 160

[Close]

BLAST of CmaCh19G010390 vs. NCBI nr
Match: XP_022969385.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita maxima])

HSP 1 Score: 328.2 bits (840), Expect = 4.3e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120

Query: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 162
           IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM
Sbjct: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 161

[Close]

BLAST of CmaCh19G010390 vs. NCBI nr
Match: XP_023554742.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.5 bits (820), Expect = 9.0e-84
Identity = 157/161 (97.52%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTR+QSGAT+LWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYG+CR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 162
           IPASSLRNGNF SQTPSVGLGPSEDISGSGRKSGRSWVWPM
Sbjct: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRSWVWPM 161

[Close]

BLAST of CmaCh19G010390 vs. NCBI nr
Match: XP_022952645.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata])

HSP 1 Score: 320.5 bits (820), Expect = 9.0e-84
Identity = 157/161 (97.52%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTR+QSGAT+LWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYG+CR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 162
           IPASSLRNGNF SQTPSVGLGPSEDISGSGRKSGRSWVWPM
Sbjct: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRSWVWPM 161

[Close]

BLAST of CmaCh19G010390 vs. NCBI nr
Match: XP_023554741.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 320.5 bits (820), Expect = 9.0e-84
Identity = 157/161 (97.52%), Postives = 160/161 (99.38%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTR+QSGAT+LWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYG+CR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRSWVWPM 162
           IPASSLRNGNF SQTPSVGLGPSEDISGSGRKSGRSWVWPM
Sbjct: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRSWVWPM 161

[Close]

BLAST of CmaCh19G010390 vs. NCBI nr
Match: KAG6572411.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 304.3 bits (778), Expect = 6.7e-79
Identity = 151/156 (96.79%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MANNFALFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAG 60
           MANNFALFLLILLILGSSAAESRQPSTR+QSGAT+LWCVAKNNADDASLQSALDWACGAG
Sbjct: 1   MANNFALFLLILLILGSSAAESRQPSTRDQSGATELWCVAKNNADDASLQSALDWACGAG 60

Query: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCR 120
           GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYG+CR
Sbjct: 61  GADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGNCR 120

Query: 121 IPASSLRNGNFPSQTPSVGLGPSEDISGSGRKSGRS 157
           IPASSLRNGNF SQTPSVGLGPSEDISGSGRKSGR+
Sbjct: 121 IPASSLRNGNFSSQTPSVGLGPSEDISGSGRKSGRA 156

[Close]

BLAST of CmaCh19G010390 vs. TAIR 10
Match: AT3G58100.1 (plasmodesmata callose-binding protein 5 )

HSP 1 Score: 140.2 bits (352), Expect = 1.5e-33
Identity = 75/152 (49.34%), Postives = 100/152 (65.79%), Query Frame = 0


Query: 10  LILLILGSSAAESRQPSTRNQSG---ATDLWCVAKNNADDASLQSALDWACGAGGADCSP 69
           L L IL ++AA     +T    G     +LWCVAKNNA+D+SLQ+A++WACG GGADC P
Sbjct: 11  LRLSILAATAAMLMVITTAQIGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGP 70

Query: 70  IQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCRIPASSL 129
           IQ GG C D ++VQ MASF FN+Y+ K+G  D++C F N AA+TSLNPS G+C+ P+S  
Sbjct: 71  IQQGGPCNDPTDVQKMASFVFNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPSSKG 130

Query: 130 RNGNFPSQTPSVGLGPSEDISGSGRKSGRSWV 159
            N    +   S+G G + D+S  GR    SW+
Sbjct: 131 ANNGRLADDTSMGAGQA-DMSRGGRPISSSWM 161

[Close]

BLAST of CmaCh19G010390 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 101.3 bits (251), Expect = 8.0e-22
Identity = 53/101 (52.48%), Postives = 66/101 (65.35%), Query Frame = 0


Query: 37  WCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGM 96
           WC+AK NA   SLQ ALD+ACG GGADC  IQ G ACY+ + +++ ASFAFN Y++KH  
Sbjct: 148 WCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFNSYYQKH-P 207

Query: 97  TDDSCFFQNAAAITSLNPSYGSCRIPASSLRNGNFPSQTPS 138
             DSC F  AA +TS +PS GSC   +SS   G   +  PS
Sbjct: 208 GSDSCNFGGAAQLTSTDPSKGSCHFSSSS---GTVSTSPPS 244

[Close]

BLAST of CmaCh19G010390 vs. TAIR 10
Match: AT1G11820.2 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-21
Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = 0


Query: 37  WCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGM 96
           +C+A +  D  +LQ+ALDWACG G ++CS IQPG +CY  +NV+  ASFAFN Y++K G 
Sbjct: 381 YCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKEGR 440

Query: 97  TDDSCFFQNAAAITSLNPSYGSCRIPAS 125
              SC F+  A IT+ +PS+GSC  P S
Sbjct: 441 ASGSCDFKGVAMITTTDPSHGSCIFPGS 468

[Close]

BLAST of CmaCh19G010390 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.0e-21
Identity = 60/143 (41.96%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 7   LFLLILLILGSSAAESRQPSTRNQSGATDLWCVAKNNADDASLQSALDWACGAGGADCSP 66
           L  L+LL+  SSAA               +WCVA+ +    +LQ+ALD+AC A GADC+P
Sbjct: 46  LSFLLLLLFRSSAA---------------MWCVARFDVTSQALQAALDYAC-AAGADCAP 105

Query: 67  IQPGGACYDASNVQNMASFAFNDYFRKHGMTDDSCFFQNAAAITSLNPSYGSCRIPASSL 126
           IQP G C+  + VQ  AS+AFN YF++  M   SC F   + I   +PSYGSC  P +S+
Sbjct: 106 IQPNGLCFLPNTVQAHASYAFNSYFQRAAMAPGSCNFAGTSTIAKTDPSYGSCVYP-NSV 165

Query: 127 RNGNFPSQTPSVGLGPSEDISGS 150
           RN    + T +VG  PS  +  S
Sbjct: 166 RNAGGSASTTTVGGTPSTTVGNS 171

[Close]

BLAST of CmaCh19G010390 vs. TAIR 10
Match: AT2G05790.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 98.6 bits (244), Expect = 5.2e-21
Identity = 44/86 (51.16%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 37  WCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASNVQNMASFAFNDYFRKHGM 96
           WCVA  +A +  LQ  LD+ACG GGADC PIQPG  CY    ++  ASFAFN Y++K G 
Sbjct: 384 WCVANGDAGEERLQGGLDYACGEGGADCRPIQPGANCYSPDTLEAHASFAFNSYYQKKGR 443

Query: 97  TDDSCFFQNAAAITSLNPSYGSCRIP 123
              SC+F  AA + S  P YG C  P
Sbjct: 444 AGGSCYFGGAAYVVSQPPKYGRCEFP 469

The following BLAST results are available for this feature:

BLAST of CmaCh19G010390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2K6	2.2e-32	49.34	PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5...	[more]
O65399	2.5e-20	51.14	Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ...	[more]
Q94CD8	1.8e-18	42.02	Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 ...	[more]
Q9M069	3.1e-18	44.44	Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 ...	[more]
Q9C7U5	4.4e-17	41.41	Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 ...	[more]

BLAST of CmaCh19G010390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZS5	2.1e-86	100.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GMC7	4.3e-84	97.52	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1JNE0	8.8e-69	81.99	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita maxima OX=3...	[more]
A0A6J1JLF2	8.8e-69	81.99	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 OS=Cucurbita maxima OX=3...	[more]
A0A6J1EY09	2.2e-67	80.75	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita moschata OX...	[more]

BLAST of CmaCh19G010390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969385.1	4.3e-86	100.00	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita maxima]	[more]
XP_023554742.1	9.0e-84	97.52	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita pepo subsp. p...	[more]
XP_022952645.1	9.0e-84	97.52	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucurbita moschata]	[more]
XP_023554741.1	9.0e-84	97.52	PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita pepo subsp. p...	[more]
KAG6572411.1	6.7e-79	96.79	PLASMODESMATA CALLOSE-BINDING PROTEIN 5, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of CmaCh19G010390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58100.1	1.5e-33	49.34	plasmodesmata callose-binding protein 5	[more]
AT1G29380.1	8.0e-22	52.48	Carbohydrate-binding X8 domain superfamily protein	[more]
AT1G11820.2	1.8e-21	51.14	O-Glycosyl hydrolases family 17 protein	[more]
AT4G13600.1	3.0e-21	41.96	Carbohydrate-binding X8 domain superfamily protein	[more]
AT2G05790.1	5.2e-21	51.16	O-Glycosyl hydrolases family 17 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012946	X8 domain	SMART	SM00768	X8_cls	coord: 36..121 e-value: 1.5E-42 score: 157.4
IPR012946	X8 domain	PFAM	PF07983	X8	coord: 36..107 e-value: 1.1E-19 score: 70.9
None	No IPR available	GENE3D	1.20.58.1040		coord: 30..131 e-value: 1.5E-11 score: 46.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..153
None	No IPR available	PANTHER	PTHR31044:SF79	BETA-1,3 GLUCANASE	coord: 28..136
IPR044788	Carbohydrate-binding X8 domain-containing protein, plant	PANTHER	PTHR31044	BETA-1,3 GLUCANASE	coord: 28..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G010390.1	CmaCh19G010390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma