CmaCh19G001950 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh19G001950
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionNAC domain-containing protein
LocationCma_Chr19: 1304392 .. 1305084 (-)
RNA-Seq ExpressionCmaCh19G001950
SyntenyCmaCh19G001950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTCTCGGAATCACTCTCTTCTGCCGGTGGGCGTGAGATTTAGACCCACTGATCCGCAGCTTCTTCGGTATCTAAACTTCAAGATTCACGGCCTCCCGTATTTCAAAGGTGCAGTCTTGGACGGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGCCGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAAACAAATAATCGGCTATTGCAAGTGCTTCAGGTTCGTTCTATTGTTTTGATTTCAATTTTCATTAGAATCTTTAACCGTGTTCTTGGAACACTTTAGGTACGAGAATATCCAATTGCCCCAACATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGCATGGAAGACTTAAAAGAAAATTACCTAAAAATCTTGAGCTGCAGCAACATAGCAAGAAAAGAATAACGGCGCCTCGATCGACCATCGGACAAGACATTATGTCTAACATGACCATCGATCAAGATTTCAATTTATAA

mRNA sequence

ATGGATTCTCGGAATCACTCTCTTCTGCCGGTGGGCGTGAGATTTAGACCCACTGATCCGCAGCTTCTTCGGTATCTAAACTTCAAGATTCACGGCCTCCCGTATTTCAAAGGTGCAGTCTTGGACGGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGCCGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAAACAAATAATCGGCTATTGCAAGTGCTTCAGGTACGAGAATATCCAATTGCCCCAACATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGCATGGAAGACTTAAAAGAAAATTACCTAAAAATCTTGAGCTGCAGCAACATAGCAAGAAAAGAATAACGGCGCCTCGATCGACCATCGGACAAGACATTATGTCTAACATGACCATCGATCAAGATTTCAATTTATAA

Coding sequence (CDS)

ATGGATTCTCGGAATCACTCTCTTCTGCCGGTGGGCGTGAGATTTAGACCCACTGATCCGCAGCTTCTTCGGTATCTAAACTTCAAGATTCACGGCCTCCCGTATTTCAAAGGTGCAGTCTTGGACGGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGCCGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAAACAAATAATCGGCTATTGCAAGTGCTTCAGGTACGAGAATATCCAATTGCCCCAACATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGCATGGAAGACTTAAAAGAAAATTACCTAAAAATCTTGAGCTGCAGCAACATAGCAAGAAAAGAATAACGGCGCCTCGATCGACCATCGGACAAGACATTATGTCTAACATGACCATCGATCAAGATTTCAATTTATAA

Protein sequence

MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQHSKKRITAPRSTIGQDIMSNMTIDQDFNL
Homology
BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot
Match: Q9C8W9 (NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 49/164 (29.88%), Postives = 73/164 (44.51%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLL-RYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLR-- 60
           MD+   S +P G RF PT+ +L+  YL+ KI+ +      +++ DLY +MEPW+I  R  
Sbjct: 1   MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLY-KMEPWDIQARCK 60

Query: 61  FGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIG 120
            G       YFF+   R      R     NR    A G W        + +  +   +IG
Sbjct: 61  LGYEEQNEWYFFSHKDRKYPTGTR----TNR--ATAAGFWKATGRDKAVLSKNS---VIG 120

Query: 121 YCKCFRYENIQLPQ-HHGEWFMHEYSLHQDSIHQVVDSDYVLCR 161
             K   Y   + P     +W MHEY L    +  V +  +V+CR
Sbjct: 121 MRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAPVQEEGWVVCR 154

BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot
Match: Q8GY42 (NAC transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=NAC025 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 0

Query: 6   HSLLPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGE 65
           H  LP G RF PTD +L + YL  K   +P     + + DLY + +PWE  L      GE
Sbjct: 13  HPHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLY-KFDPWE--LPSKASFGE 72

Query: 66  H-LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFR 125
           H  YFF+   R   N  R     NR     +G W    +  PIF   + K  +G  K   
Sbjct: 73  HEWYFFSPRDRKYPNGVR----PNR--AATSGYWKATGTDKPIFTCNSHK--VGVKKALV 132

Query: 126 YENIQLPQH-HGEWFMHEYSLHQDSIHQVVD--------------SDYVLCRLSKHGRLK 185
           +   + P+    +W MHEY L   ++                    D+VLCR+ K     
Sbjct: 133 FYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYK----- 192

Query: 186 RKLPKNLELQQHSKKRITAPRSTIGQDIMSNM 201
                     ++S +R T  R  + +D+M  M
Sbjct: 193 ----------KNSSQRPTMERVLLREDLMEGM 198

BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot
Match: Q9ZNU2 (NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 48/168 (28.57%), Postives = 73/168 (43.45%), Query Frame = 0

Query: 9   LPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLY 68
           LP G RF PTD +L + YL  K   +P     + D DLY + +PWE+  +      +  Y
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLY-KFDPWELPAK-ASFGEQEWY 76

Query: 69  FFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFAT-KTDKQIIGYCKCFRYEN 128
           FF+   R   N  R     NR     +G W    +  P+ +T     + +G  K   + +
Sbjct: 77  FFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYS 136

Query: 129 IQLPQH-HGEWFMHEYSLHQDSIHQVVD----------SDYVLCRLSK 164
            + P+    +W MHEY L  +    + D           D+VLCR+ K
Sbjct: 137 GKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYK 176

BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot
Match: Q93VY3 (NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 64/210 (30.48%), Postives = 93/210 (44.29%), Query Frame = 0

Query: 9   LPVGVRFRPTDPQLL-RYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGE-HL 68
           LP G RF PTD +LL +YL  K+ G  +    + D DLY + +PW+  L    + GE   
Sbjct: 14  LPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLY-KFDPWD--LPSKALFGEKEW 73

Query: 69  YFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYEN 128
           YFF+   R   N  R     NR  G  +G W    +   I A   D + +G  K   +  
Sbjct: 74  YFFSPRDRKYPNGSR----PNRVAG--SGYWKATGTDKIITA---DGRRVGIKKALVFYA 133

Query: 129 IQLPQ-HHGEWFMHEYSL--HQDSIHQVVDSDYVLCRLSKH---GRLKRKLPKNLELQQH 188
            + P+     W MHEY L  H  S       D+VLCR+ K     + +   P     ++H
Sbjct: 134 GKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREEH 193

Query: 189 SKKRITAPRSTIGQDIMSNM--TIDQDFNL 209
           S    ++  S+   D++ +     DQ FNL
Sbjct: 194 STNGSSSSSSSQLDDVLDSFPEIKDQSFNL 211

BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot
Match: Q9LS24 (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-07
Identity = 59/197 (29.95%), Postives = 78/197 (39.59%), Query Frame = 0

Query: 7   SLLPVGVRFRPTDPQLLR-YLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLR-FGGIAGE 66
           S LP G RF PTD +L+  YL  K+ GL      +   DLY   +PWE+  + F      
Sbjct: 4   SCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLY-SFDPWELPDKSFLPNRDM 63

Query: 67  HLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRY 126
             YFF    +   N  R     NR  G   G W        I  T     IIGY K   +
Sbjct: 64  EWYFFCSRDKKYPNGFR----TNR--GTKAGYWKATGKDRKI--TSRSSSIIGYRKTLVF 123

Query: 127 ENIQLP-QHHGEWFMHEYSLHQDSI---HQVVDSDYVLCRLSKHGRLK-----RKLPKNL 186
              + P      W MHEY L  D      Q +   +VLCR++    +K     RK+P   
Sbjct: 124 YKGRAPLGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIKTNTKIRKIPSEQ 183

Query: 187 EL----QQHSKKRITAP 189
            +          R+T+P
Sbjct: 184 TIGSGESSGLSSRVTSP 191

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL
Match: A0A6J1HXC3 (NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111467099 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.0e-120
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK
Sbjct: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
           CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH
Sbjct: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180

Query: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           SKKRITAPRSTIGQDIMSNMTIDQDFNL
Sbjct: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 208

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL
Match: A0A6J1HSR6 (NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC111467095 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.1e-85
Identity = 154/186 (82.80%), Postives = 165/186 (88.71%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDS +  LLPVGVRF+PTDPQLL+YL++KIHG PYFK AVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I GEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTD  IIGYCK
Sbjct: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
            FRYEN+QLP+ HGEW MHEYSLHQDSI Q VD DYVLCR  K+ RLKRKL K+LE QQH
Sbjct: 121 RFRYENVQLPERHGEWIMHEYSLHQDSIQQAVDLDYVLCRFKKNERLKRKLQKDLEEQQH 180

Query: 181 SKKRIT 187
           SK+R+T
Sbjct: 181 SKRRMT 186

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL
Match: A0A6J1HH13 (NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463973 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.4e-81
Identity = 152/186 (81.72%), Postives = 160/186 (86.02%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDS +  LLPVGVRFRPTD QLL+YL +KIHG PYFK AVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFRPTDQQLLQYLIWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
             GE LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENS S IFATKTDK IIGYCK
Sbjct: 61  TDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASSIFATKTDKTIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
            FRYEN QLP+HHGEW MHEYSLHQDSI Q VDS+YVLCR  K+ R KRKL K+LE QQ 
Sbjct: 121 RFRYENAQLPEHHGEWIMHEYSLHQDSIQQAVDSNYVLCRFKKNERFKRKLQKDLEEQQL 180

Query: 181 SKKRIT 187
           SKKR+T
Sbjct: 181 SKKRMT 186

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL
Match: A0A6J1HJD2 (uncharacterized protein LOC111464082 OS=Cucurbita moschata OX=3662 GN=LOC111464082 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.1e-76
Identity = 140/160 (87.50%), Postives = 149/160 (93.12%), Query Frame = 0

Query: 49  MEPWEIWLRFGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFA 108
           MEPWEIWLRFGGI GE LYFFTKLKR TNNS  L A+INRK+GLANGTWSGENS SPIFA
Sbjct: 1   MEPWEIWLRFGGINGEDLYFFTKLKRLTNNSEHLWAYINRKIGLANGTWSGENSASPIFA 60

Query: 109 TKTDKQIIGYCKCFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLK 168
           TKTDKQIIGY KCFRYEN+QLP+HHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSK+ R++
Sbjct: 61  TKTDKQIIGYFKCFRYENVQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVE 120

Query: 169 RKLPKNLELQQHSKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           RKLPKNLELQQHSKKRITAP STIGQD MS++TIDQDFNL
Sbjct: 121 RKLPKNLELQQHSKKRITAPGSTIGQDTMSDVTIDQDFNL 160

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL
Match: A0A6J1HVP9 (NAC domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111467098 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.7e-71
Identity = 128/148 (86.49%), Postives = 135/148 (91.22%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDS +  LLPVGVRF+PTDPQLL+YL++KIHG PYFK AVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I GEHLYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTD  IIGYCK
Sbjct: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSI 149
            FRYEN+QLP+ HGEW MHEYSLHQDSI
Sbjct: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 148

BLAST of CmaCh19G001950 vs. NCBI nr
Match: XP_022967654.1 (NAC transcription factor 25-like [Cucurbita maxima])

HSP 1 Score: 439.9 bits (1130), Expect = 1.2e-119
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK
Sbjct: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
           CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH
Sbjct: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180

Query: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           SKKRITAPRSTIGQDIMSNMTIDQDFNL
Sbjct: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 208

BLAST of CmaCh19G001950 vs. NCBI nr
Match: XP_023511533.1 (NAC domain-containing protein 30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376.3 bits (965), Expect = 1.7e-100
Identity = 178/208 (85.58%), Postives = 192/208 (92.31%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDSRN SLLPVGV+F+PTD QLL+YLNFKIH LPYFKGAVLD DLYGE+EPWEIWLRFGG
Sbjct: 1   MDSRNRSLLPVGVKFKPTDQQLLQYLNFKIHALPYFKGAVLDCDLYGEIEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I G++LYFFTKLKR TNNS  L AHINRK+GLANGTWSGENS SPIFATKTDKQIIGYCK
Sbjct: 61  INGQYLYFFTKLKRLTNNSEHLWAHINRKIGLANGTWSGENSASPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
           CFRYEN+QLP+HHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSK+ R+KRKL KNLELQQH
Sbjct: 121 CFRYENVQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVKRKLLKNLELQQH 180

Query: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           SKKRI AP STI QD MS++TIDQDF+L
Sbjct: 181 SKKRIMAPGSTIEQDTMSDVTIDQDFDL 208

BLAST of CmaCh19G001950 vs. NCBI nr
Match: KAG6571608.1 (NAC domain-containing protein 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-99
Identity = 178/208 (85.58%), Postives = 190/208 (91.35%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDSRN SLL VGV+F+PTD QLL+YLNFKIHGLPYFKGAVL  DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSRNRSLLSVGVKFKPTDQQLLQYLNFKIHGLPYFKGAVLYCDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I GE LYFFTKLKR TNNS  L AHINRK+GLANGTWSGENS SPIFATKTDKQIIGYCK
Sbjct: 61  INGEDLYFFTKLKRLTNNSEHLWAHINRKIGLANGTWSGENSASPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
           CFRYEN+QL +HHGEWFMHEYSLHQD IHQVVDSDYVLCRLSK+ R++RKLPKNLELQQH
Sbjct: 121 CFRYENVQLSEHHGEWFMHEYSLHQDLIHQVVDSDYVLCRLSKNERVERKLPKNLELQQH 180

Query: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           SKKRITA  STIGQD MS++TIDQDF+L
Sbjct: 181 SKKRITATGSTIGQDTMSDVTIDQDFDL 208

BLAST of CmaCh19G001950 vs. NCBI nr
Match: KAG6571619.1 (NAC domain-containing protein 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.5 bits (950), Expect = 9.2e-99
Identity = 178/208 (85.58%), Postives = 187/208 (89.90%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDSRN SLLPVGV+F+PTD QLL+YLNFKIHGLPYFKGAVLD DLYGEMEPWEIWL F G
Sbjct: 1   MDSRNRSLLPVGVKFKPTDQQLLQYLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLCFEG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I GE LYFFTKLKR TNNS  L AHIN K+GLANGTWSGEN  SPIFATKTDKQIIGYCK
Sbjct: 61  INGEDLYFFTKLKRLTNNSEHLWAHINHKIGLANGTWSGENLASPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
           CFRYENIQLP+HHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSK+ RL+RKLPKNLELQQH
Sbjct: 121 CFRYENIQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERLERKLPKNLELQQH 180

Query: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           SKKRI AP STI QD MS+ TIDQD +L
Sbjct: 181 SKKRIMAPGSTIEQDTMSDTTIDQDIDL 208

BLAST of CmaCh19G001950 vs. NCBI nr
Match: XP_023511534.1 (NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85
Identity = 156/186 (83.87%), Postives = 166/186 (89.25%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           M S + SLLPVGVRFRPTDPQLL+YL++KIHG PYFK AVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MGSHDRSLLPVGVRFRPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I GE LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTDK IIGYCK
Sbjct: 61  IDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDKTIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
            FRYEN+QLP+HHGEW MHEYSLHQDSI Q VDSDYVLCR  K+ RLKRKL K+LE QQ 
Sbjct: 121 RFRYENVQLPEHHGEWIMHEYSLHQDSIQQAVDSDYVLCRFKKNERLKRKLQKDLEEQQL 180

Query: 181 SKKRIT 187
           SK+R+T
Sbjct: 181 SKRRMT 186

BLAST of CmaCh19G001950 vs. TAIR 10
Match: AT1G71930.1 (vascular related NAC-domain protein 7 )

HSP 1 Score: 65.1 bits (157), Expect = 7.7e-11
Identity = 49/164 (29.88%), Postives = 73/164 (44.51%), Query Frame = 0

Query: 1   MDSRNHSLLPVGVRFRPTDPQLL-RYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLR-- 60
           MD+   S +P G RF PT+ +L+  YL+ KI+ +      +++ DLY +MEPW+I  R  
Sbjct: 1   MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLY-KMEPWDIQARCK 60

Query: 61  FGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIG 120
            G       YFF+   R      R     NR    A G W        + +  +   +IG
Sbjct: 61  LGYEEQNEWYFFSHKDRKYPTGTR----TNR--ATAAGFWKATGRDKAVLSKNS---VIG 120

Query: 121 YCKCFRYENIQLPQ-HHGEWFMHEYSLHQDSIHQVVDSDYVLCR 161
             K   Y   + P     +W MHEY L    +  V +  +V+CR
Sbjct: 121 MRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAPVQEEGWVVCR 154

BLAST of CmaCh19G001950 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 )

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 52/172 (30.23%), Postives = 76/172 (44.19%), Query Frame = 0

Query: 4   RNHSLLPVGVRFRPTDPQLLR-YLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIA 63
           +    LP G RF PTD +L+  YL  KI    +   A+ D DL  + EPWE+  +   + 
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMG 70

Query: 64  GEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCF 123
           G+  YFF+   R      R +   N       G W        IF   T  +++G  K  
Sbjct: 71  GKEWYFFSLRDRKYPTGVRTNRATN------TGYWKTTGKDKEIF-NSTTSELVGMKKTL 130

Query: 124 RYENIQLPQHHGE---WFMHEYSLHQDSIHQVVDSD-YVLCRLSKHGRLKRK 171
            +   + P+  GE   W MHEY LH  S ++    D +V+CR+ K     +K
Sbjct: 131 VFYRGRAPR--GEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKK 171

BLAST of CmaCh19G001950 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 )

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 52/172 (30.23%), Postives = 76/172 (44.19%), Query Frame = 0

Query: 4   RNHSLLPVGVRFRPTDPQLLR-YLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIA 63
           +    LP G RF PTD +L+  YL  KI    +   A+ D DL  + EPWE+  +   + 
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMG 70

Query: 64  GEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCF 123
           G+  YFF+   R      R +   N       G W        IF   T  +++G  K  
Sbjct: 71  GKEWYFFSLRDRKYPTGVRTNRATN------TGYWKTTGKDKEIF-NSTTSELVGMKKTL 130

Query: 124 RYENIQLPQHHGE---WFMHEYSLHQDSIHQVVDSD-YVLCRLSKHGRLKRK 171
            +   + P+  GE   W MHEY LH  S ++    D +V+CR+ K     +K
Sbjct: 131 VFYRGRAPR--GEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKK 171

BLAST of CmaCh19G001950 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 )

HSP 1 Score: 61.6 bits (148), Expect = 8.5e-10
Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 0

Query: 6   HSLLPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGE 65
           H  LP G RF PTD +L + YL  K   +P     + + DLY + +PWE  L      GE
Sbjct: 13  HPHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLY-KFDPWE--LPSKASFGE 72

Query: 66  H-LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFR 125
           H  YFF+   R   N  R     NR     +G W    +  PIF   + K  +G  K   
Sbjct: 73  HEWYFFSPRDRKYPNGVR----PNR--AATSGYWKATGTDKPIFTCNSHK--VGVKKALV 132

Query: 126 YENIQLPQH-HGEWFMHEYSLHQDSIHQVVD--------------SDYVLCRLSKHGRLK 185
           +   + P+    +W MHEY L   ++                    D+VLCR+ K     
Sbjct: 133 FYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYK----- 192

Query: 186 RKLPKNLELQQHSKKRITAPRSTIGQDIMSNM 201
                     ++S +R T  R  + +D+M  M
Sbjct: 193 ----------KNSSQRPTMERVLLREDLMEGM 198

BLAST of CmaCh19G001950 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 48/168 (28.57%), Postives = 73/168 (43.45%), Query Frame = 0

Query: 9   LPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLY 68
           LP G RF PTD +L + YL  K   +P     + D DLY + +PWE+  +      +  Y
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLY-KFDPWELPAK-ASFGEQEWY 76

Query: 69  FFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFAT-KTDKQIIGYCKCFRYEN 128
           FF+   R   N  R     NR     +G W    +  P+ +T     + +G  K   + +
Sbjct: 77  FFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYS 136

Query: 129 IQLPQH-HGEWFMHEYSLHQDSIHQVVD----------SDYVLCRLSK 164
            + P+    +W MHEY L  +    + D           D+VLCR+ K
Sbjct: 137 GKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYK 176

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9C8W91.1e-0929.88NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 ... [more]
Q8GY421.2e-0828.30NAC transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=NAC025 PE=2 SV=1[more]
Q9ZNU21.6e-0828.57NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 ... [more]
Q93VY31.0e-0730.48NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 ... [more]
Q9LS242.3e-0729.95NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 ... [more]
Match NameE-valueIdentityDescription
A0A6J1HXC36.0e-120100.00NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111467099 PE=... [more]
A0A6J1HSR62.1e-8582.80NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC11146709... [more]
A0A6J1HH131.4e-8181.72NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463... [more]
A0A6J1HJD24.1e-7687.50uncharacterized protein LOC111464082 OS=Cucurbita moschata OX=3662 GN=LOC1114640... [more]
A0A6J1HVP96.7e-7186.49NAC domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11146709... [more]
Match NameE-valueIdentityDescription
XP_022967654.11.2e-119100.00NAC transcription factor 25-like [Cucurbita maxima][more]
XP_023511533.11.7e-10085.58NAC domain-containing protein 30-like [Cucurbita pepo subsp. pepo][more]
KAG6571608.11.9e-9985.58NAC domain-containing protein 30, partial [Cucurbita argyrosperma subsp. sororia... [more]
KAG6571619.19.2e-9985.58NAC domain-containing protein 30, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_023511534.12.0e-8583.87NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT1G71930.17.7e-1129.88vascular related NAC-domain protein 7 [more]
AT2G24430.12.2e-1030.23NAC domain containing protein 38 [more]
AT2G24430.22.2e-1030.23NAC domain containing protein 38 [more]
AT1G61110.18.5e-1028.30NAC domain containing protein 25 [more]
AT1G52880.11.1e-0928.57NAC (No Apical Meristem) domain transcriptional regulator superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003441NAC domainPFAMPF02365NAMcoord: 10..143
e-value: 1.4E-16
score: 61.5
IPR003441NAC domainPROSITEPS51005NACcoord: 9..164
score: 21.504944
IPR036093NAC domain superfamilyGENE3D2.170.150.80NAC domaincoord: 18..167
e-value: 7.3E-22
score: 79.8
IPR036093NAC domain superfamilySUPERFAMILY101941NAC domaincoord: 4..162
NoneNo IPR availablePANTHERPTHR31989NAC DOMAIN-CONTAINING PROTEIN 82-RELATEDcoord: 9..190
NoneNo IPR availablePANTHERPTHR31989:SF220NAC TRANSCRIPTION FACTOR-LIKE PROTEINcoord: 9..190

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh19G001950.1CmaCh19G001950.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding