CmaCh18G012000 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh18G012000
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr18: 9515569 .. 9518517 (-)
RNA-Seq ExpressionCmaCh18G012000
SyntenyCmaCh18G012000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTATGGCTGATGTCCCCTACATAACATGGAAGAATGGAGTGAATTCAATTAGGAATTTGACTCAGAAAATTTCTACAATTTACAGTACTACTCTAGTATAAATATTCTCATTTATTGTTTTATCATACAATAGAATTTAAAAACGAAGAAGGATTCAACCATGTTAAAAGTTTAATAATGAAGTGTTTGAGTGAGCAACACGATGATTTGAAAACCCTCTCTTTGTGCCCATTGAGAAGCAGAGACATTATTGAATGAAAGAGAGCTTAAGTCAGGTCAGTTGACCTATCTCCATTCTGGATCTCACCCTGTTGAACTCCCTTAGTTCTGAGTCATCAACCCAATCCCTATTTTCTCCTTCAAATTCCTGTAAGCTGCATCAATGTGTTAGCTTTTAACATTAGGCTGGTATCGTAGGGGTTTCAAAATTTGTGATATGAGTAGCTCACCCCCACAAGTTTGATGTTCTCAAAACTTGGGTGATTCTAAACTCTCATTCAACTTTTCTAAAAACCTCCTAGAAAGTAACACATGGAGGCTATATATGGCCTACCCGTAAAGCCTAAAATGATTGAAGTAATACATGTGCTTTCTTCATAGACATTAGTTTAAGGATGATTCTTGATATATTTGCATGTTTTTTTCCCTGAAAAGTTCTTAGACTCTTCTAAGACAGACAATTATCTAACCTCACAACATTTGATGTTCAGAAAGCATAAGGTATGATATGTTATCGTAAATAGAACCAAGTCTCCCTGACCTTCTTCTGCCGCTGCAAACCACCGCCTTCCTCCCCACAAATTGGTTCCCTCGCTGGTAAGCTGTTTATGTTTTTCTTTTGTTGTTGCAATTCTTGTTATTTTCGACACCTTCGCAAGAATGATCTTCTCTTATGTTTTGTTTAATACCCTTACAAGGATGTTGAGGTTATGTAGCAACATTATGATGATTTGATAACGCAAGAGGCCCATACTCCTCTCTGCTGAGCTCTATCGACTCCAATTATGGCATGATTTCTGAATAGATTGGTCTCCAACCTTAGAATTCTTTTGTTTTAGGATTTGGTTCTGGAAGTGTTGGAACTATGTTTAAGGTAGATTTTGAGTGGAGATCTCTTGTTTGAGGTGAGAATTTCTGTGTGTCATTCTCTATTCAGCTGAACTTTTGTTCTTGGTTTCATGGGTGAAACTGGATTTATGTTTTGTTGTTTAGGAGATGCTTTATGAAGTTGTATGAATTGAATAGTCTACTACACTCATTAGATCCTACATCCGTTTCCTTATAATGGTCTGGAAATCTCTCCCTAACATATATGTTTTAAAACAGTGAGGTTGATATTTAATGAGCCAAAACGAACAATACCTACTAACGGTGAGATTTAGCTGTTATATGATTTCCTTTTAATGGGTTAGACTATCGAATTAAAAGAGCTAAATTACACTACACTAAATTATTATTCATTACCAAATACCGTACTTAATTGGTTCAAATTTAAAGATGAAAGATATTAAATACTAATTTATTTCATATTACAATGGATATCTCTCAAATCTAAGCTTTAGACCTTTTTTCAAAAATATACTATCATTGCTTCGCTAATGTCCCAAAGTTCTGCAGCGCTAGGTTGATGGGCCTGAGATGGGATAATGATGGATGACTTGGGCCCATGGGTCATTCTTGGACTCCCCGGAAATGGGCCGGATGCATTCCCAGATCAAACTAACACATTTGGGCCCAGTACCCATCCCAATGTGCCAAACTTTGTCTCCTTTCTTAACTCTTTCTTTTGCTTCGAAATACGCAAGTTCATACCACAACGCAGAGGAAGACTGGTTCCCAAATCTATGCAGAGTCATCAATGCCGCTTCCAGGTCTTTATCATTCAGCTTCAGAACTTTCCCGATCGCCCTTATCACTGCACCTCCTGATACCGGCAAGCAAATATGATTGATCACAGTCTTGAAATTTGGTATGTAAATTTCTTGGGATTTGTCCAAGAATCGCTTCCGTAGCCTCGAAATCACGTGTTTTAGTTTCTCAGATAATGGCAGGATTGATGAACCAAGAAGGGTTATGTTTATCCGGAGAGTTTCTGGGAAAACCTGTAGCGTGTCTCGTGTCACAGACACCCCGAGTTTTCCGTCCTTATCCTCTTCCCGCATGGCTGAAAGGTAACTCTTATCGTCGAAGGATGTCAGGGTTCGAAGTGATTTGAATAGTTTGTATTTTGAATAATCTTTCGCCTCTTTTCTGTTGGTGAGCAGAATAGCTGCACCGCCCATGCGGAAGTAGCAGTTCAGAATTAATCTGGAGGGTTCCTTTCCTGCATACCAACCGTTTGATAGAATTTCAGTACTGAGCACTACGGCATTTGAGTTCTCGTGAACCTGAAGTAGATTTTCTGCTAAATGAATGGCCACAGCACTTGCACTGCACCCCATTCCAGAGAGATTGAAGCTCTTAATATCGCTTCTCATGGAGTATCTGTTGATAATTATGGAGGAGAGGGAAGGAGAAGGACAAAAGCCACTGCAGTTAACGATGAGAATATCAATGTCATGTGGAGAGAGATGGGTTTTGGTTAAAAGATCGTCCATAACTGGAAATAGCACCATGTGGACTTCATTAATGGATTCCTGTTGATGGGTTTTGGGTGGAATGAAATGCAGAGCAGGAGGGAGACATGTTTCTTCACTCTGTCCAGAAGATTTGAGAGTCTTAGCCATGAAATTGAGACTCTCGCTGTCAAAAATACCCATCAACGTGGCATTTTCAAGGAAGGTGGCAAAGGGAACTCTGAGGAAGCTTGGTGGTTTAAGACACGAGAAGTCAACCAAATAGACAGAACGAGGAGCATTCAAGAAGAATCGCCTGAGAATCATATAGATAACAAAACAAGAGAAAAGGAAGAAGAGATGGAACATGGGATTCCATCCTTTTAA

mRNA sequence

ATGGAAGTTATGGCTGATGTCCCCTACATAACATGGAAGAATGGAGTGAATTCAATTAGGAATTTGACTCAGAAAATTTCTACAATTTACAGTACTACTCTAAACCAAGTCTCCCTGACCTTCTTCTGCCGCTGCAAACCACCGCCTTCCTCCCCACAAATTGGTTCCCTCGCTGATAATGGCAGGATTGATGAACCAAGAAGGGTTATGTTTATCCGGAGAGTTTCTGGGAAAACCTGTAGCGTGTCTCGTGTCACAGACACCCCGAGTTTTCCGTCCTTATCCTCTTCCCGCATGGCTGAAAGCACTTGCACTGCACCCCATTCCAGAGAGATTGAAGCTCTTAATATCGCTTCTCATGGAGTATCTGTTGATAATTATGGAGGAGAGGGAAGGAGAAGGACAAAAGCCACTGCAGTTAACGATGAGAATATCAATAGCAGGAGGGAGACATGTTTCTTCACTCTGTCCAGAAGATTTGAGAGTCTTAGCCATGAAATTGAGACTCTCGCTGTCAAAAATACCCATCAACGTGGCATTTTCAAGGAAGGTGGCAAAGGGAACTCTGAGGAAGCTTGGTGGTTTAAGACACGAGAAGTCAACCAAATAGACAGAACGAGGAGCATTCAAGAAGAATCGCCTGAGAATCATATAGATAACAAAACAAGAGAAAAGGAAGAAGAGATGGAACATGGGATTCCATCCTTTTAA

Coding sequence (CDS)

ATGGAAGTTATGGCTGATGTCCCCTACATAACATGGAAGAATGGAGTGAATTCAATTAGGAATTTGACTCAGAAAATTTCTACAATTTACAGTACTACTCTAAACCAAGTCTCCCTGACCTTCTTCTGCCGCTGCAAACCACCGCCTTCCTCCCCACAAATTGGTTCCCTCGCTGATAATGGCAGGATTGATGAACCAAGAAGGGTTATGTTTATCCGGAGAGTTTCTGGGAAAACCTGTAGCGTGTCTCGTGTCACAGACACCCCGAGTTTTCCGTCCTTATCCTCTTCCCGCATGGCTGAAAGCACTTGCACTGCACCCCATTCCAGAGAGATTGAAGCTCTTAATATCGCTTCTCATGGAGTATCTGTTGATAATTATGGAGGAGAGGGAAGGAGAAGGACAAAAGCCACTGCAGTTAACGATGAGAATATCAATAGCAGGAGGGAGACATGTTTCTTCACTCTGTCCAGAAGATTTGAGAGTCTTAGCCATGAAATTGAGACTCTCGCTGTCAAAAATACCCATCAACGTGGCATTTTCAAGGAAGGTGGCAAAGGGAACTCTGAGGAAGCTTGGTGGTTTAAGACACGAGAAGTCAACCAAATAGACAGAACGAGGAGCATTCAAGAAGAATCGCCTGAGAATCATATAGATAACAAAACAAGAGAAAAGGAAGAAGAGATGGAACATGGGATTCCATCCTTTTAA

Protein sequence

MEVMADVPYITWKNGVNSIRNLTQKISTIYSTTLNQVSLTFFCRCKPPPSSPQIGSLADNGRIDEPRRVMFIRRVSGKTCSVSRVTDTPSFPSLSSSRMAESTCTAPHSREIEALNIASHGVSVDNYGGEGRRRTKATAVNDENINSRRETCFFTLSRRFESLSHEIETLAVKNTHQRGIFKEGGKGNSEEAWWFKTREVNQIDRTRSIQEESPENHIDNKTREKEEEMEHGIPSF
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..236

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G012000.1CmaCh18G012000.1mRNA