CmaCh18G010170 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G010170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Translocase subunit seca
Location	Cma_Chr18: 8502049 .. 8503216 (+)
RNA-Seq Expression	CmaCh18G010170
Synteny	CmaCh18G010170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCACTGCGGCATTCTGTCGAACACCTTCTCGGGTCACGACGAGGAGATGAGGACCTCTGTTCCGCGTCCCGTTTCAGACGTTAGAGATCATATTGTTTGCCCTAAACCACGGCGTCTTAGTAATCTACAGGTCGCCGTCAACGGCCACGCCGATAGCTTTTTCCGGTGGAATGTTTGGTTAGTTTTCTGATTCTTATCGTGATTTTACAAAAGAAGAACCCTTGGAAATGCCTCCCTTTTGTTAATTCTTTCTTGAACTGAATTTCAGTCACCAAGTTGAGCAAATTGACATGGCAGCCGGACCGGATCTACTTGACTTCCTGCTGAAAAAGGTATGCTATGCTCTTATCTCTTCCCTTTTTAGTTTCTTCAGATCATAAGAGGATGAATATTGGAATTTAGAGGAGGCCCTCGTAGCCTAAGTTGTTGAATTTTATAGGATTGTCGCAGCGTGGATCAATCGTTTACGCAGTTGGCTTCGACGCCCCCTTTTTTACGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGACCGTTTTGGGGATGAAAATTTCATCCCCTTTTCACCGATCGCTTCACCGTCAGGTCAGTTGTCGCCCCCTACAGCAACCTCCAGGAAGGGAGGCGGCCTAGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTGGACAGGGATAGGCAAAATTGCAGCATCCCTGCCTTCGCTTAGAAAACCCATCTCAATTTCAAATCCATAGAATACAAAGATCTCCAAATACAATTTGCCCTTCTTTTGTGAATACTTTTGAAGTGTTCTTTGAAATGTAAATGAAAATCAATTCCCATGTATACAAAAGCTATGTATTTTTAAGCTTTTTTTGTCTTTTTTTCATTTTTTTGAGTCGATCAAGAACAAGCAACGATGCGTGGATGGTCAACCTCTTGTATTATATTTTTGTACTTAGAAGTAAGTCCTAAGGTTGAGGAAATTTTCATTGTTGTTCGCTGGTTTTGGGATGATTTGTGAGAGAGAGTGAGAGGCAATTTGTAGATATTGCAGAAGAACTTGAAATGGAGTCTGTAGAATTGATCAACATGTTGATATATTGTAGAACATTTCTTATTCTTAATCTCTGTTCATCATCTTTGTT

mRNA sequence

ATGAATCACTGCGGCATTCTGTCGAACACCTTCTCGGGTCACGACGAGGAGATGAGGACCTCTGTTCCGCGTCCCGTTTCAGACGTTAGAGATCATATTGTTTGCCCTAAACCACGGCGTCTTAGTAATCTACAGGTCGCCGTCAACGGCCACGCCGATAGCTTTTTCCGGTGGAATGTTTGTCACCAAGTTGAGCAAATTGACATGGCAGCCGGACCGGATCTACTTGACTTCCTGCTGAAAAAGGATTGTCGCAGCGTGGATCAATCGTTTACGCAGTTGGCTTCGACGCCCCCTTTTTTACGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGACCGTTTTGGGGATGAAAATTTCATCCCCTTTTCACCGATCGCTTCACCGTCAGGTCAGTTGTCGCCCCCTACAGCAACCTCCAGGAAGGGAGGCGGCCTAGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTGGACAGGGATAGGCAAAATTGCAGCATCCCTGCCTTCGCTTAGAAAACCCATCTCAATTTCAAATCCATAGAATACAAAGATCTCCAAATACAATTTGCCCTTCTTTTGTGAATACTTTTGAAGTGTTCTTTGAAATGTAAATGAAAATCAATTCCCATGTATACAAAAGCTATGTATTTTTAAGCTTTTTTTGTCTTTTTTTCATTTTTTTGAGTCGATCAAGAACAAGCAACGATGCGTGGATGGTCAACCTCTTGTATTATATTTTTGTACTTAGAAGTAAGTCCTAAGGTTGAGGAAATTTTCATTGTTGTTCGCTGGTTTTGGGATGATTTGTGAGAGAGAGTGAGAGGCAATTTGTAGATATTGCAGAAGAACTTGAAATGGAGTCTGTAGAATTGATCAACATGTTGATATATTGTAGAACATTTCTTATTCTTAATCTCTGTTCATCATCTTTGTT

Coding sequence (CDS)

ATGAATCACTGCGGCATTCTGTCGAACACCTTCTCGGGTCACGACGAGGAGATGAGGACCTCTGTTCCGCGTCCCGTTTCAGACGTTAGAGATCATATTGTTTGCCCTAAACCACGGCGTCTTAGTAATCTACAGGTCGCCGTCAACGGCCACGCCGATAGCTTTTTCCGGTGGAATGTTTGTCACCAAGTTGAGCAAATTGACATGGCAGCCGGACCGGATCTACTTGACTTCCTGCTGAAAAAGGATTGTCGCAGCGTGGATCAATCGTTTACGCAGTTGGCTTCGACGCCCCCTTTTTTACGTGGGTCTCCGCCGAGCAGAGTAGCCAACCCATTGATTCAGGACGACCGTTTTGGGGATGAAAATTTCATCCCCTTTTCACCGATCGCTTCACCGTCAGGTCAGTTGTCGCCCCCTACAGCAACCTCCAGGAAGGGAGGCGGCCTAGTAAGGGCGAGTTTTGGGAACAAACCAACGGTGAGGATTGAGGGTTTCGATTGCCTGGACAGGGATAGGCAAAATTGCAGCATCCCTGCCTTCGCTTAG

Protein sequence

MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNVCHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFGDENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPAFA

Homology

[Close]

BLAST of CmaCh18G010170 vs. ExPASy TrEMBL
Match: A0A6J1HUX4 (uncharacterized protein LOC111467698 OS=Cucurbita maxima OX=3661 GN=LOC111467698 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.2e-103
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV
Sbjct: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA
Sbjct: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180

Query: 181 FA 183
           FA
Sbjct: 181 FA 182

[Close]

BLAST of CmaCh18G010170 vs. ExPASy TrEMBL
Match: A0A6J1G278 (uncharacterized protein LOC111449982 OS=Cucurbita moschata OX=3662 GN=LOC111449982 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 5.8e-103
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV
Sbjct: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DENFIPFSPIASPSGQLSPPTATSRKGGG VRASFGNKPTVRIEGFDCLDRDRQNCSIPA
Sbjct: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180

Query: 181 FA 183
           FA
Sbjct: 181 FA 182

[Close]

BLAST of CmaCh18G010170 vs. ExPASy TrEMBL
Match: A0A6J1DC97 (uncharacterized protein LOC111018762 OS=Momordica charantia OX=3673 GN=LOC111018762 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.5e-79
Identity = 154/183 (84.15%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC ILSNTFSGH EEMRTSVP P+SD+RD IVCPKPRRLSNL+V VNGHAD+  RWN+
Sbjct: 1   MNHCAILSNTFSGH-EEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNL 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLL K+  SVDQSFTQLAS+PPFL GSPPSRVANPLIQD RFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLTKNGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DENFIPFSPI-ASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIP 180
           DE FIPF+PI ASPS QLSP TA SRK GG VRA+FGNKP VRIEGFDCLDRDRQNCSIP
Sbjct: 121 DEKFIPFAPIAASPSVQLSPSTA-SRK-GGRVRANFGNKPAVRIEGFDCLDRDRQNCSIP 180

Query: 181 AFA 183
           AFA
Sbjct: 181 AFA 180

[Close]

BLAST of CmaCh18G010170 vs. ExPASy TrEMBL
Match: A0A6J1GZ47 (uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC111458833 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.9e-76
Identity = 147/182 (80.77%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC ILSN FS H EEMR  VP P+SD+RD +VCPKPRRLSN +V V GHADS  RWN+
Sbjct: 1   MNHCAILSNAFSSH-EEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
            HQVEQIDMA GPDLLDFLL +   SVDQSFTQLAS+PPFL GSPPSRVANPLIQD RFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DE FIPF+PIASPSGQLSP TA SRK GG VRASFGNKPTVRIEGFDC DRDRQNCSIPA
Sbjct: 121 DEKFIPFAPIASPSGQLSPSTA-SRK-GGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPA 179

Query: 181 FA 183
           FA
Sbjct: 181 FA 179

[Close]

BLAST of CmaCh18G010170 vs. ExPASy TrEMBL
Match: A0A6J1JI50 (uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.1e-75
Identity = 146/182 (80.22%), Postives = 154/182 (84.62%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC ILSN FS H EEMR  VP P+SD+RD +VCPKPRRLSN +V V GHADS  RWN+
Sbjct: 1   MNHCAILSNAFSSH-EEMRDPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
            HQVEQIDMA GPDLLDFLL +   SVDQSFTQLAS+PPFL GSPPSRVANPLIQD RFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DE FIP +PIASPSGQLSP TA SRK GG VRASFGNKPTVRIEGFDC DRDRQNCSIPA
Sbjct: 121 DEKFIPLAPIASPSGQLSPSTA-SRK-GGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPA 179

Query: 181 FA 183
           FA
Sbjct: 181 FA 179

[Close]

BLAST of CmaCh18G010170 vs. NCBI nr
Match: XP_022968461.1 (uncharacterized protein LOC111467698 [Cucurbita maxima] >XP_022968462.1 uncharacterized protein LOC111467698 [Cucurbita maxima])

HSP 1 Score: 385.6 bits (989), Expect = 2.4e-103
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV
Sbjct: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA
Sbjct: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180

Query: 181 FA 183
           FA
Sbjct: 181 FA 182

[Close]

BLAST of CmaCh18G010170 vs. NCBI nr
Match: XP_022945871.1 (uncharacterized protein LOC111449982 [Cucurbita moschata] >XP_022945872.1 uncharacterized protein LOC111449982 [Cucurbita moschata] >XP_022945873.1 uncharacterized protein LOC111449982 [Cucurbita moschata] >XP_023542945.1 uncharacterized protein LOC111802711 [Cucurbita pepo subsp. pepo] >XP_023542946.1 uncharacterized protein LOC111802711 [Cucurbita pepo subsp. pepo] >KAG6573958.1 hypothetical protein SDJN03_27845, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015488.1 hypothetical protein SDJN02_23124 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 383.3 bits (983), Expect = 1.2e-102
Identity = 181/182 (99.45%), Postives = 181/182 (99.45%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV
Sbjct: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DENFIPFSPIASPSGQLSPPTATSRKGGG VRASFGNKPTVRIEGFDCLDRDRQNCSIPA
Sbjct: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180

Query: 181 FA 183
           FA
Sbjct: 181 FA 182

[Close]

BLAST of CmaCh18G010170 vs. NCBI nr
Match: XP_022150691.1 (uncharacterized protein LOC111018762 [Momordica charantia])

HSP 1 Score: 305.4 bits (781), Expect = 3.2e-79
Identity = 154/183 (84.15%), Postives = 163/183 (89.07%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC ILSNTFSGH EEMRTSVP P+SD+RD IVCPKPRRLSNL+V VNGHAD+  RWN+
Sbjct: 1   MNHCAILSNTFSGH-EEMRTSVPGPISDLRDQIVCPKPRRLSNLKVTVNGHADASLRWNL 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           CHQVEQIDMAAGPDLLDFLL K+  SVDQSFTQLAS+PPFL GSPPSRVANPLIQD RFG
Sbjct: 61  CHQVEQIDMAAGPDLLDFLLTKNGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DENFIPFSPI-ASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIP 180
           DE FIPF+PI ASPS QLSP TA SRK GG VRA+FGNKP VRIEGFDCLDRDRQNCSIP
Sbjct: 121 DEKFIPFAPIAASPSVQLSPSTA-SRK-GGRVRANFGNKPAVRIEGFDCLDRDRQNCSIP 180

Query: 181 AFA 183
           AFA
Sbjct: 181 AFA 180

[Close]

BLAST of CmaCh18G010170 vs. NCBI nr
Match: XP_038893407.1 (uncharacterized protein LOC120082204 [Benincasa hispida])

HSP 1 Score: 303.9 bits (777), Expect = 9.3e-79
Identity = 150/183 (81.97%), Postives = 162/183 (88.52%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSN-LQVAVNGHADSFFRWN 60
           MNHC ILSN FSGH EEMRTS+P P+SD+RD +VCPKPRRL+N L VAVNGHAD+  RWN
Sbjct: 1   MNHCAILSNAFSGH-EEMRTSLPCPISDLRDQLVCPKPRRLTNHLNVAVNGHADTSLRWN 60

Query: 61  VCHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRF 120
           + HQVEQIDMAAGPDLLDFLL K  RSVDQSFTQLAS+PPFL GSPPSRVANPLIQD RF
Sbjct: 61  LSHQVEQIDMAAGPDLLDFLLTKGGRSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARF 120

Query: 121 GDENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIP 180
           G+E FIPF+PIASPSGQLSP  +TS + GG VRASFGNKPTVRIEGFDCLDRDRQNCSIP
Sbjct: 121 GEEKFIPFAPIASPSGQLSP--STSSRKGGRVRASFGNKPTVRIEGFDCLDRDRQNCSIP 180

Query: 181 AFA 183
           AFA
Sbjct: 181 AFA 180

[Close]

BLAST of CmaCh18G010170 vs. NCBI nr
Match: XP_022957437.1 (uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothetical protein SDJN02_06117 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.1 bits (749), Expect = 1.6e-75
Identity = 147/182 (80.77%), Postives = 155/182 (85.16%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC ILSN FS H EEMR  VP P+SD+RD +VCPKPRRLSN +V V GHADS  RWN+
Sbjct: 1   MNHCAILSNAFSSH-EEMRAPVPGPISDLRDQLVCPKPRRLSNPKVTVIGHADSSLRWNL 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
            HQVEQIDMA GPDLLDFLL +   SVDQSFTQLAS+PPFL GSPPSRVANPLIQD RFG
Sbjct: 61  SHQVEQIDMATGPDLLDFLLTRGGCSVDQSFTQLASSPPFLCGSPPSRVANPLIQDARFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQNCSIPA 180
           DE FIPF+PIASPSGQLSP TA SRK GG VRASFGNKPTVRIEGFDC DRDRQNCSIPA
Sbjct: 121 DEKFIPFAPIASPSGQLSPSTA-SRK-GGRVRASFGNKPTVRIEGFDCRDRDRQNCSIPA 179

Query: 181 FA 183
           FA
Sbjct: 181 FA 179

[Close]

BLAST of CmaCh18G010170 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34
Identity = 83/187 (44.39%), Postives = 108/187 (57.75%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNH  +  N F+    ++R+S    V   +  +VCPKPRR+       + H     R   
Sbjct: 1   MNHFAVQPNAFAA-GGDLRSSSVSVVERDQTTVVCPKPRRIGLRN--NHHHPSRSLRCYF 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTP-PFLRGSPPSRVANPLIQDDRF 120
            HQ+E  +  A  D+LD +L KD    +Q   Q+  +P PFL GSPPSRVANPL QD RF
Sbjct: 61  SHQLELCESKAETDILDIILTKDGYGAEQVNKQVIDSPSPFLCGSPPSRVANPLTQDARF 120

Query: 121 GDENFIPFSPIASPSGQL----SPPTATSRKGGGLVRASFGNKPTVRIEGFDCLDRDRQN 180
            DE  +  S +  P   L    SP +++ RKGG +VR +FGN P VR+EGFDCLDRD +N
Sbjct: 121 RDE-IVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDCLDRDSRN 180

Query: 181 CSIPAFA 183
           CSIPA A
Sbjct: 181 CSIPALA 183

[Close]

BLAST of CmaCh18G010170 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 80/186 (43.01%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MN CGI  N F    EEMR +    VSD RD ++CPKPRR+     A+N H+    RW +
Sbjct: 2   MNSCGIQQNAF----EEMRRNA--AVSDRRDAVICPKPRRVG----ALNHHSSRSLRWQL 61

Query: 61  CHQVEQIDMAAGPDLLDFLLKK-DCRSVDQSFTQLASTPP-FLRGSPPSRVANPLIQDDR 120
            HQ+E  +  +G ++LDF+L K      +Q  T+   TPP F  GSPPSRV+NPL +D  
Sbjct: 62  NHQMELCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSL 121

Query: 121 FGDENFIPFSPIASPSGQLSPPTATSRKGGGLVRA--SFGNKPTVRIEGFDCLDRDRQNC 180
           F +E  +  SP  S      P   +S + G  V A  SFGN P VR+ GFDC DR   N 
Sbjct: 122 FREELLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNR 176

Query: 181 SIPAFA 183
           SI   A
Sbjct: 182 SISTLA 176

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BLAST of CmaCh18G010170 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.6 bits (327), Expect = 1.3e-30
Identity = 80/186 (43.01%), Postives = 102/186 (54.84%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MN CGI  N F    EEMR +    VSD RD ++CPKPRR+     A+N H+    RW +
Sbjct: 2   MNSCGIQQNAF----EEMRRNA--AVSDRRDAVICPKPRRVG----ALNHHSSRSLRWQL 61

Query: 61  CHQVEQIDMAAGPDLLDFLLKK-DCRSVDQSFTQLASTPP-FLRGSPPSRVANPLIQDDR 120
            HQ+E  +  +G ++LDF+L K      +Q  T+   TPP F  GSPPSRV+NPL +D  
Sbjct: 62  NHQMELCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSL 121

Query: 121 FGDENFIPFSPIASPSGQLSPPTATSRKGGGLVRA--SFGNKPTVRIEGFDCLDRDRQNC 180
           F +E  +  SP  S      P   +S + G  V A  SFGN P VR+ GFDC DR   N 
Sbjct: 122 FREELLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC-DRRSSNR 176

Query: 181 SIPAFA 183
           SI   A
Sbjct: 182 SISTLA 176

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BLAST of CmaCh18G010170 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 3.8e-30
Identity = 85/183 (46.45%), Postives = 97/183 (53.01%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC +  N F    EE R  VP   S   D +VCPKPRR +N+      H       +V
Sbjct: 1   MNHCSLQQNAFLSR-EESRGFVP-IYSHPVDSVVCPKPRRANNVIRPFRLHFSLSGADDV 60

Query: 61  CHQVEQIDMAAGPDLLDFLLKKDCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQDDRFG 120
           C      D  AG DLLD   +K+  S        + +PPF  GSPPSR ANPL QD RFG
Sbjct: 61  C------DSKAGEDLLDIFRRKESVS--------SRSPPFFLGSPPSRAANPLAQDARFG 120

Query: 121 DENFIPFSPIASPSGQLSPPTATSRKGGGLVRASFGNKP-TVRIEGFDCLDRDRQNCSIP 180
           DE     SP  SP   L P  + SR   G  R  FG KP TVR+EGFDCL+RDR N SIP
Sbjct: 121 DEKLNTVSPSLSP---LLP--SASRVKSGCGRMKFGVKPATVRVEGFDCLNRDRPNSSIP 162

Query: 181 AFA 183
           A A
Sbjct: 181 AMA 162

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BLAST of CmaCh18G010170 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.9 bits (315), Expect = 3.2e-29
Identity = 82/195 (42.05%), Postives = 106/195 (54.36%), Query Frame = 0


Query: 1   MNHCGILSNTFSGHDEEMRTSVPRPVSDVRDHIVCPKPRRLSNLQVAVNGHADSFFRWNV 60
           MNHC +  N F   +E M         D +D +VCPKPRR+  L       A++  R   
Sbjct: 67  MNHCNLQQNAFMSREEMMG-------FDRKDLVVCPKPRRVGLL-------ANNVIRPLR 126

Query: 61  CHQ----VEQIDMAAGPDLLDFLLKK-DCRSVDQSFTQLASTPPFLRGSPPSRVANPLIQ 120
            H      +  D  AG +LL+ + +K D  ++ Q    L+S+PP+  GSPPSR ANPL Q
Sbjct: 127 LHMSQAAADLCDSKAGAELLEIIRRKEDNGTIGQ---LLSSSPPYFPGSPPSRAANPLAQ 186

Query: 121 DDRFGDENFIPFSPIA------SPSGQLSPPTATSRKGG-GLVRASFG-NKPTVRIEGFD 180
           D RF DE   P SP +      S +G  SP +++S     G VR  FG N P VR+EGFD
Sbjct: 187 DARFRDEKLNPISPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFD 244

Query: 181 CLDRDRQNCSIPAFA 183
           CL+RDRQN SIPA A
Sbjct: 247 CLNRDRQNSSIPAMA 244

The following BLAST results are available for this feature:

BLAST of CmaCh18G010170 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh18G010170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HUX4	1.2e-103	100.00	uncharacterized protein LOC111467698 OS=Cucurbita maxima OX=3661 GN=LOC111467698...	[more]
A0A6J1G278	5.8e-103	99.45	uncharacterized protein LOC111449982 OS=Cucurbita moschata OX=3662 GN=LOC1114499...	[more]
A0A6J1DC97	1.5e-79	84.15	uncharacterized protein LOC111018762 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1GZ47	7.9e-76	80.77	uncharacterized protein LOC111458833 OS=Cucurbita moschata OX=3662 GN=LOC1114588...	[more]
A0A6J1JI50	5.1e-75	80.22	uncharacterized protein LOC111484540 OS=Cucurbita maxima OX=3661 GN=LOC111484540...	[more]

BLAST of CmaCh18G010170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968461.1	2.4e-103	100.00	uncharacterized protein LOC111467698 [Cucurbita maxima] >XP_022968462.1 uncharac...	[more]
XP_022945871.1	1.2e-102	99.45	uncharacterized protein LOC111449982 [Cucurbita moschata] >XP_022945872.1 unchar...	[more]
XP_022150691.1	3.2e-79	84.15	uncharacterized protein LOC111018762 [Momordica charantia]	[more]
XP_038893407.1	9.3e-79	81.97	uncharacterized protein LOC120082204 [Benincasa hispida]	[more]
XP_022957437.1	1.6e-75	80.77	uncharacterized protein LOC111458833 [Cucurbita moschata] >KAG7032074.1 hypothet...	[more]

BLAST of CmaCh18G010170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	1.1e-34	44.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	1.3e-30	43.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	1.3e-30	43.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02555.1	3.8e-30	46.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G16110.1	3.2e-29	42.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..151
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 1..182
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G010170.1	CmaCh18G010170.1	mRNA