CmaCh18G003870 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCTTTGCTTTCCCCGTAATTGGTCGAGAAAAGCTCAGGCAGCCCAGATCGCCGGCGCCGGAAAAAGGACACGTCGGAGGGGAGTGGTGGGATCTAGTGAAATGGAGGGGAAGAGCAGAAAAACACGAATTTGGTGTGTGGTTTAACGTAGTACTCTGTTCTTTCCAATCTCTGTGTTCTGTTCTTCTTCACTCACAGCTTCGGAAATGGCGGATTTCTGTTTATATGGATAGCCAATGCCAAACGATTTTGATTTTACTGTTTTTCAGTTTCATTTGTGTGTGCTCATCTTCACAATTTGGATTATCTCATCGATGATCATCTGAAGATAAAAAAATTTATTTGAGATTTGATTCGAGCATCAAATTATGCAACTTAAATTACACGTAGTTGTTATTGCTTGCATCATATATAACAGAAATTTCAATATTTCAAATTTTATTCTAAAAAATCTCTTTCGAAATCTCTATGTCCTCGTTTTCTAAATTTTTCTTCCTTAATCGGGGCCAGAGTCTCGAGAATAGTCATATGGCCGTAGGCGATGCAAGAACGAATTGACTTAACTTATTTGTTGCTGGGAAGTGAGTAACGACAAGTACGTGGTCATCAAAAGTGCGATTGTGACAAGTGGTATCAGACAATAACAGCTACATGACTTTATATAGCTTAAAATATTTTAAGAGTTCTAACATTTACACTACTATGTCTCGAAGATGATGAGAAAGTATATCGAGCACGAGGATGACTAGATCAGTGATTCAGAATGTTCAAATCACATGATGGTGCAATGGAAGCAGGGTGACGCTTAGACAAGAAAGCATTACCAGACTTGGATTTAGAGAACGAAACATTACTAGACTTGAACAACATTGAAGAAATTCTTCTAGAGAAGACCGGGAGCAAGATTGAACCATTAATCTTTAGGATGATAATTAATAATAAATTTGAAGAGAAATACACATCAATTAAGATTTTAATCACAAATTCTGAAAATAAATAAATAAATAAAATAAGAGGAAGAGTTTGGGCCGATTTTCAGTGGACTGAGAGGTTACTGGGCTCAAGCCCATAATTAGACTCAGAAGGAGAAGAAAGGAGGAACCGGTATTTACCGGTTCCCGTAGTTGGAAGGAAACGGCTACTGACATTTGGCAAACCGAGCAGGCAGGCCGATGTTTTGGAGTTTGAAACTTGGATTTTCAGTGGATGAAAGGGGGAAGGAATAATTGAGTATGAGATTGTGAGAGGTTAGGTCTTGAATTTGGGATTTTAGGGTTTAAATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAATGTTGCTCTTGCCGATGACATCCTCTCTCGGGTACTTTCACTCTATATTTAATCCTTTTGTTTTTGCTCTCCGAATCCTCGATCTTGTTTTTGATTCCTCAGCGATTAATTTCGCACTGCTATGCTAGAGTTTTGTTTGTTGAGATTGTGGAATTGGATTTCTGAACAAATTGGAGTGAAATCGGGAGTTTATTTAGTCCTTGAATTGTAGTTTTGCATGAAGATGGATTGTTTTGGCTTGTATAATCGTTATGCTTTCTTTTTGTATAATAGGTTGCTGGTTTAATTGCTCCAGTGATATCTCTATCAATTTCCTATTTTTGAAGTTAATATATACCGGTTAATCATTGTGTTGATTATTATCATAATATTGTGCATGTATTTCGCTCTTTTTTGTTTAATCGGCCATGAAGTTAATATTGTTCAATTTTGATGAATTTTTATTGTTCTATTATTGTTCCAGACTTTCAATTGCAGCCAAGGGAGGGCGTTCCTTTTCAACAGCGTGTAAGTGGCCTTGTTATTTTAAATTTTTAGTTTCAAGCTTCAAATCCAAATGTCTAGATTATTTGGGAGGCATCATTTAATGAGCTTCAAATCCAAATGTCTAGATTGTTGTTATTTTAAATTGCCTTGTACAATTGTTAGTTATCCTCAATTTTTTTCTTATTCCTCCTCATTGGCATTTCTGGTCTACAGATTGAGATGAAATGACCTTATTTTGATCTGTTTCTGATCTCGCATCTAGATTTTACATACATTGAAATACTTTTACCTTTTTCCAGAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCTGTTGCGGAGAACTTCTTGGATGGAAATATGTAAGCTTTCTTCTCTGACTATCTATGCAATAGAACTGAAAACTTTTCAATAGGAATCATGATGAACTGGCTGAACGGTCAAAGGAGCTAGTTATAACTTGTATATTTCAGTGTGTGGTTCTGTTATCAGCTACCTATCCTTTGCATATTTCAACTTTCGAACTTATAATATGAAGATCCTGAAACTAGTTTAGGTGAGAAAACGTTCGTTTGATGCCCTCAAGTATCAAATGTATCATCAGTAGTAATAATCTATTAAGAGTGGACATGGATTCTATTAGACCCTCAATATTGCATACATATGTTAGAAGGGGCAAAGAAATTAATTCACAGGTCCAGCAGTTAGTTGCCGTGGGAATTTAAATAGCTTTTGTGTTTCGAGTGGGTTATGTTATGTTTTGAATTGTTAGCCTGTGAGCTACAATTTTCCATGACACGGGTCATGTTGTGGTGGGAATTTAAAGTACCCAACCAGACACGGGTCATGTTGTGGTGGGAATTTAAAGTACCCAACCAGACACGGATCTTCTTCCATGGTTGTCACGTTTTTGCCCAGAGTATGTGGACACAGAGGAGAAGATGGTTCAAAAGCTCATATTAGGGCTGAGACTTGAGATATAGAGCACCGTGGGGGCTATTGCACCTGCCACTTATGCAGCAGCTCTCCATGCAGCCACCATGATGGATGCTCTATTGCAGAAAGCATCTAGAAAATCTGGGGATCAGAGGAATTTTCAGGGTAAGAGAGAATGGAATGAGCGGTCAGACAGGTCATCGTGGTACGGGAGTAAAAGTCGATCGCATAGGCCACCTCCAACAGAGAGACATTAGGGCGTTAAAATTGAGGCCCCCAACGTAGAGAGACCTATTTTCCCCACTTTGCGGTACTAGTCATTCGGGGGAGTGTAGGAGAGGCACTGACGCGTGCTTCCACTACGACTAGATGGTCACAGGAAGGTTGATTGCCCTCACAAGAGATGCCAGGATGAGAACATAGTGTCTGGATCAGGGCAAAGTAGTCGAGGGGGCATGGCGCAGAATCGCGCCACCAATAGTGCAACTACCGGAAAGAAGACAATATCTATTAGCGGTTGGCTTTGCTATTACAAATGGTATCAGAGCCAGACACTGAGTGGTGTGCCAGCAAAGACGTTGGCCCCTAAGGGGAGTAGATTGTGAGATCCCACATTGCTTGGAGAGGGAACGAAGCATTCCTTATAAGTGTGTTAAAACCTCTCCCTTGTAGATGCGTTTTAAAACCTTGAGTGAAAACCCAAAAGGGAAAACCCATAGAGGACAATATCTCTTAGCAGTGAGCTTGAGCTGTTACAATATAGGAATAAAACCAAGTTTAATTTTAACCATAAGAAAGATAGCTAAATGTAGTAGGGTGAAGTGGTTATCTTGTGAAAATAGCTGAGGTGCGCAAGCTAGTTTGGACAGTCACGTACATTAAAAAAATATGCTTGAAATCATTAAAAAAATTACATTGAACTAGAGTTGATAATAGTGTAATTTATGTATCGTGTCTAAAATCATTTGATGGTTTGTGTGTTCATATGAAAAGTTTTTCTCTTAAATTTTGTTGATTTGCAGTCTTAGATTTGTTTAACTGATGTTGCTGCACTTAGGTAACTACACATGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGGTAGTCGGACATTTTCATTCTCTTAACTTTCCAAATAACATAAGGTTTGCTATAAATGTGGTATTAGTCCTGGGTTTATTCATTCCTTTGACAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAGGCTTATCCTAGTTCAAGCGATATGGATAATCCTTAGTGAGTTTCTCAGAATAAGGAAATTGAAGCATACATGTCAAAGTGTTGTATGACCATAATCTATGATATCATAAGATTTTTATGTGGAGTCGACGTGTCTTGAATGCTCGATTCTCCCCTCTTTTAATCCCTTTTTACAAGGTAAAAGCCTTCTGGTTCTGATATATTTGTAAAGTTGAATTGCAAGTTTATTGAAAGGTATCGTCTATGCTGAGAAACGAGTTTCACAATCCCGTTCATAACAGTTGTATGTGAACTCGTATTAATTCGGTCCAAACTTATTCATGTCTTCTGTGAAGTTGATGAGAAGAAAAGGAAAAAAATGAATGATTTGGGTTTGGTTATAATACTTTGTTGATTATGTTGTGGTTAGAGGACCAGTGGGAAACCAAAGCAGCCACTGGAAAAGGAAAAGGCAGGGAAGTAAGTTGTTTGCAGTGCAGTAGAAGCTCGTGTTAGCTTTTTGGAAGGACAGGAGATGGCCCACCGTATTGACTAACAGAGGATAAAGCAAAGCAGCAAAGGGGCCGCATTGAGGCGTATTGCTTGCTGCTGTTGCTGCTGCTGCTGCTCGGCTAACCCCGCCGTACACGACGAGTGAGACTGCGGCGGGCTCATTTAAAATGTTATGAATCAGTAAAAGGGGGAA ATGTCTCTTTGCTTTCCCCGTAATTGGTCGAGAAAAGCTCAGGCAGCCCAGATCGCCGGCGCCGGAAAAAGGACACGTCGGAGGGGAGTGGTGGGATCTAGTGAAATGGAGGGGAAGAGCAGAAAAACACGAATTTGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAATGTTGCTCTTGCCGATGACATCCTCTCTCGGACTTTCAATTGCAGCCAAGGGAGGGCGTTCCTTTTCAACAGCGTAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCTGTTGCGGAGAACTTCTTGGATGGAAATATGTAACTACACATGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAGGCTTATCCTAGTTCAAGCGATATGGATAATCCTTAGTGAGTTTCTCAGAATAAGGAAATTGAAGCATACATGTCAAAGTGTTGTATGACCATAATCTATGATATCATAAGATTTTTATGTGGAGTCGACGTGTCTTGAATGCTCGATTCTCCCCTCTTTTAATCCCTTTTTACAAGGTAAAAGCCTTCTGGTTCTGATATATTTGTAAAGTTGAATTGCAAGTTTATTGAAAGGTATCGTCTATGCTGAGAAACGAGTTTCACAATCCCGTTCATAACAGTTGTATGTGAACTCGTATTAATTCGGTCCAAACTTATTCATGTCTTCTGTGAAGTTGATGAGAAGAAAAGGAAAAAAATGAATGATTTGGGTTTGGTTATAATACTTTGTTGATTATGTTGTGGTTAGAGGACCAGTGGGAAACCAAAGCAGCCACTGGAAAAGGAAAAGGCAGGGAAGTAAGTTGTTTGCAGTGCAGTAGAAGCTCGTGTTAGCTTTTTGGAAGGACAGGAGATGGCCCACCGTATTGACTAACAGAGGATAAAGCAAAGCAGCAAAGGGGCCGCATTGAGGCGTATTGCTTGCTGCTGTTGCTGCTGCTGCTGCTCGGCTAACCCCGCCGTACACGACGAGTGAGACTGCGGCGGGCTCATTTAAAATGTTATGAATCAGTAAAAGGGGGAA ATGTCTCTTTGCTTTCCCCGTAATTGGTCGAGAAAAGCTCAGGCAGCCCAGATCGCCGGCGCCGGAAAAAGGACACGTCGGAGGGGAGTGGTGGGATCTAGTGAAATGGAGGGGAAGAGCAGAAAAACACGAATTTGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAATGTTGCTCTTGCCGATGACATCCTCTCTCGGACTTTCAATTGCAGCCAAGGGAGGGCGTTCCTTTTCAACAGCGTAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCTGTTGCGGAGAACTTCTTGGATGGAAATATGTAACTACACATGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAGGCTTATCCTAGTTCAAGCGATATGGATAATCCTTAG MSLCFPRNWSRKAQAAQIAGAGKRTRRRGVVGSSEMEGKSRKTRIWVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSDMDNP Homology
BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 4.4e-41 Identity = 75/115 (65.22%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.5e-33 Identity = 59/102 (57.84%), Postives = 85/102 (83.33%), Query Frame = 0
BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2) HSP 1 Score: 142.1 bits (357), Expect = 5.7e-33 Identity = 58/103 (56.31%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 5.3e-31 Identity = 57/102 (55.88%), Postives = 80/102 (78.43%), Query Frame = 0
BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 5.0e-29 Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of CmaCh18G003870 vs. ExPASy TrEMBL
Match: A0A6J1K1C3 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111490199 PE=3 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CmaCh18G003870 vs. ExPASy TrEMBL
Match: A0A6J1GSW9 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111457237 PE=3 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CmaCh18G003870 vs. ExPASy TrEMBL
Match: A0A6J1KNK6 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111495802 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62 Identity = 111/124 (89.52%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of CmaCh18G003870 vs. ExPASy TrEMBL
Match: A0A6J1EGK2 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111434136 PE=3 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62 Identity = 111/124 (89.52%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of CmaCh18G003870 vs. ExPASy TrEMBL
Match: A0A6J1CHK2 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111010960 PE=3 SV=1) HSP 1 Score: 243.8 bits (621), Expect = 5.1e-61 Identity = 109/124 (87.90%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of CmaCh18G003870 vs. NCBI nr
Match: XP_022955197.1 (protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955198.1 protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955199.1 protein yippee-like At5g53940 isoform X2 [Cucurbita moschata] >XP_022994493.1 protein yippee-like At5g53940 isoform X1 [Cucurbita maxima] >XP_022994495.1 protein yippee-like At5g53940 isoform X2 [Cucurbita maxima] >XP_023543017.1 protein yippee-like At5g53940 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543018.1 protein yippee-like At5g53940 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6573285.1 Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012450.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 265.4 bits (677), Expect = 3.4e-67 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CmaCh18G003870 vs. NCBI nr
Match: XP_022927222.1 (protein yippee-like At5g53940 [Cucurbita moschata] >XP_023001759.1 protein yippee-like At5g53940 [Cucurbita maxima] >XP_023519081.1 protein yippee-like At5g53940 [Cucurbita pepo subsp. pepo] >KAG7019603.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 248.8 bits (634), Expect = 3.3e-62 Identity = 111/124 (89.52%), Postives = 122/124 (98.39%), Query Frame = 0
BLAST of CmaCh18G003870 vs. NCBI nr
Match: XP_022140248.1 (protein yippee-like At5g53940 [Momordica charantia]) HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60 Identity = 109/124 (87.90%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of CmaCh18G003870 vs. NCBI nr
Match: XP_004146613.1 (protein yippee-like At5g53940 isoform X1 [Cucumis sativus] >KGN64700.1 hypothetical protein Csa_013910 [Cucumis sativus]) HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60 Identity = 109/124 (87.90%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of CmaCh18G003870 vs. NCBI nr
Match: XP_008442812.1 (PREDICTED: protein yippee-like At5g53940 [Cucumis melo]) HSP 1 Score: 242.3 bits (617), Expect = 3.1e-60 Identity = 108/124 (87.10%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of CmaCh18G003870 vs. TAIR 10
Match: AT5G53940.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 169.1 bits (427), Expect = 3.1e-42 Identity = 75/115 (65.22%), Postives = 95/115 (82.61%), Query Frame = 0
BLAST of CmaCh18G003870 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 142.1 bits (357), Expect = 4.1e-34 Identity = 58/103 (56.31%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of CmaCh18G003870 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein ) HSP 1 Score: 142.1 bits (357), Expect = 4.1e-34 Identity = 58/103 (56.31%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of CmaCh18G003870 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein ) HSP 1 Score: 138.7 bits (348), Expect = 4.5e-33 Identity = 58/102 (56.86%), Postives = 80/102 (78.43%), Query Frame = 0
BLAST of CmaCh18G003870 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein ) HSP 1 Score: 136.0 bits (341), Expect = 2.9e-32 Identity = 57/100 (57.00%), Postives = 78/100 (78.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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