CmaCh18G003870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G003870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Protein yippee-like
Location	Cma_Chr18: 2112852 .. 2117602 (-)
RNA-Seq Expression	CmaCh18G003870
Synteny	CmaCh18G003870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTTTGCTTTCCCCGTAATTGGTCGAGAAAAGCTCAGGCAGCCCAGATCGCCGGCGCCGGAAAAAGGACACGTCGGAGGGGAGTGGTGGGATCTAGTGAAATGGAGGGGAAGAGCAGAAAAACACGAATTTGGTGTGTGGTTTAACGTAGTACTCTGTTCTTTCCAATCTCTGTGTTCTGTTCTTCTTCACTCACAGCTTCGGAAATGGCGGATTTCTGTTTATATGGATAGCCAATGCCAAACGATTTTGATTTTACTGTTTTTCAGTTTCATTTGTGTGTGCTCATCTTCACAATTTGGATTATCTCATCGATGATCATCTGAAGATAAAAAAATTTATTTGAGATTTGATTCGAGCATCAAATTATGCAACTTAAATTACACGTAGTTGTTATTGCTTGCATCATATATAACAGAAATTTCAATATTTCAAATTTTATTCTAAAAAATCTCTTTCGAAATCTCTATGTCCTCGTTTTCTAAATTTTTCTTCCTTAATCGGGGCCAGAGTCTCGAGAATAGTCATATGGCCGTAGGCGATGCAAGAACGAATTGACTTAACTTATTTGTTGCTGGGAAGTGAGTAACGACAAGTACGTGGTCATCAAAAGTGCGATTGTGACAAGTGGTATCAGACAATAACAGCTACATGACTTTATATAGCTTAAAATATTTTAAGAGTTCTAACATTTACACTACTATGTCTCGAAGATGATGAGAAAGTATATCGAGCACGAGGATGACTAGATCAGTGATTCAGAATGTTCAAATCACATGATGGTGCAATGGAAGCAGGGTGACGCTTAGACAAGAAAGCATTACCAGACTTGGATTTAGAGAACGAAACATTACTAGACTTGAACAACATTGAAGAAATTCTTCTAGAGAAGACCGGGAGCAAGATTGAACCATTAATCTTTAGGATGATAATTAATAATAAATTTGAAGAGAAATACACATCAATTAAGATTTTAATCACAAATTCTGAAAATAAATAAATAAATAAAATAAGAGGAAGAGTTTGGGCCGATTTTCAGTGGACTGAGAGGTTACTGGGCTCAAGCCCATAATTAGACTCAGAAGGAGAAGAAAGGAGGAACCGGTATTTACCGGTTCCCGTAGTTGGAAGGAAACGGCTACTGACATTTGGCAAACCGAGCAGGCAGGCCGATGTTTTGGAGTTTGAAACTTGGATTTTCAGTGGATGAAAGGGGGAAGGAATAATTGAGTATGAGATTGTGAGAGGTTAGGTCTTGAATTTGGGATTTTAGGGTTTAAATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAATGTTGCTCTTGCCGATGACATCCTCTCTCGGGTACTTTCACTCTATATTTAATCCTTTTGTTTTTGCTCTCCGAATCCTCGATCTTGTTTTTGATTCCTCAGCGATTAATTTCGCACTGCTATGCTAGAGTTTTGTTTGTTGAGATTGTGGAATTGGATTTCTGAACAAATTGGAGTGAAATCGGGAGTTTATTTAGTCCTTGAATTGTAGTTTTGCATGAAGATGGATTGTTTTGGCTTGTATAATCGTTATGCTTTCTTTTTGTATAATAGGTTGCTGGTTTAATTGCTCCAGTGATATCTCTATCAATTTCCTATTTTTGAAGTTAATATATACCGGTTAATCATTGTGTTGATTATTATCATAATATTGTGCATGTATTTCGCTCTTTTTTGTTTAATCGGCCATGAAGTTAATATTGTTCAATTTTGATGAATTTTTATTGTTCTATTATTGTTCCAGACTTTCAATTGCAGCCAAGGGAGGGCGTTCCTTTTCAACAGCGTGTAAGTGGCCTTGTTATTTTAAATTTTTAGTTTCAAGCTTCAAATCCAAATGTCTAGATTATTTGGGAGGCATCATTTAATGAGCTTCAAATCCAAATGTCTAGATTGTTGTTATTTTAAATTGCCTTGTACAATTGTTAGTTATCCTCAATTTTTTTCTTATTCCTCCTCATTGGCATTTCTGGTCTACAGATTGAGATGAAATGACCTTATTTTGATCTGTTTCTGATCTCGCATCTAGATTTTACATACATTGAAATACTTTTACCTTTTTCCAGAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCTGTTGCGGAGAACTTCTTGGATGGAAATATGTAAGCTTTCTTCTCTGACTATCTATGCAATAGAACTGAAAACTTTTCAATAGGAATCATGATGAACTGGCTGAACGGTCAAAGGAGCTAGTTATAACTTGTATATTTCAGTGTGTGGTTCTGTTATCAGCTACCTATCCTTTGCATATTTCAACTTTCGAACTTATAATATGAAGATCCTGAAACTAGTTTAGGTGAGAAAACGTTCGTTTGATGCCCTCAAGTATCAAATGTATCATCAGTAGTAATAATCTATTAAGAGTGGACATGGATTCTATTAGACCCTCAATATTGCATACATATGTTAGAAGGGGCAAAGAAATTAATTCACAGGTCCAGCAGTTAGTTGCCGTGGGAATTTAAATAGCTTTTGTGTTTCGAGTGGGTTATGTTATGTTTTGAATTGTTAGCCTGTGAGCTACAATTTTCCATGACACGGGTCATGTTGTGGTGGGAATTTAAAGTACCCAACCAGACACGGGTCATGTTGTGGTGGGAATTTAAAGTACCCAACCAGACACGGATCTTCTTCCATGGTTGTCACGTTTTTGCCCAGAGTATGTGGACACAGAGGAGAAGATGGTTCAAAAGCTCATATTAGGGCTGAGACTTGAGATATAGAGCACCGTGGGGGCTATTGCACCTGCCACTTATGCAGCAGCTCTCCATGCAGCCACCATGATGGATGCTCTATTGCAGAAAGCATCTAGAAAATCTGGGGATCAGAGGAATTTTCAGGGTAAGAGAGAATGGAATGAGCGGTCAGACAGGTCATCGTGGTACGGGAGTAAAAGTCGATCGCATAGGCCACCTCCAACAGAGAGACATTAGGGCGTTAAAATTGAGGCCCCCAACGTAGAGAGACCTATTTTCCCCACTTTGCGGTACTAGTCATTCGGGGGAGTGTAGGAGAGGCACTGACGCGTGCTTCCACTACGACTAGATGGTCACAGGAAGGTTGATTGCCCTCACAAGAGATGCCAGGATGAGAACATAGTGTCTGGATCAGGGCAAAGTAGTCGAGGGGGCATGGCGCAGAATCGCGCCACCAATAGTGCAACTACCGGAAAGAAGACAATATCTATTAGCGGTTGGCTTTGCTATTACAAATGGTATCAGAGCCAGACACTGAGTGGTGTGCCAGCAAAGACGTTGGCCCCTAAGGGGAGTAGATTGTGAGATCCCACATTGCTTGGAGAGGGAACGAAGCATTCCTTATAAGTGTGTTAAAACCTCTCCCTTGTAGATGCGTTTTAAAACCTTGAGTGAAAACCCAAAAGGGAAAACCCATAGAGGACAATATCTCTTAGCAGTGAGCTTGAGCTGTTACAATATAGGAATAAAACCAAGTTTAATTTTAACCATAAGAAAGATAGCTAAATGTAGTAGGGTGAAGTGGTTATCTTGTGAAAATAGCTGAGGTGCGCAAGCTAGTTTGGACAGTCACGTACATTAAAAAAATATGCTTGAAATCATTAAAAAAATTACATTGAACTAGAGTTGATAATAGTGTAATTTATGTATCGTGTCTAAAATCATTTGATGGTTTGTGTGTTCATATGAAAAGTTTTTCTCTTAAATTTTGTTGATTTGCAGTCTTAGATTTGTTTAACTGATGTTGCTGCACTTAGGTAACTACACATGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGGTAGTCGGACATTTTCATTCTCTTAACTTTCCAAATAACATAAGGTTTGCTATAAATGTGGTATTAGTCCTGGGTTTATTCATTCCTTTGACAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAGGCTTATCCTAGTTCAAGCGATATGGATAATCCTTAGTGAGTTTCTCAGAATAAGGAAATTGAAGCATACATGTCAAAGTGTTGTATGACCATAATCTATGATATCATAAGATTTTTATGTGGAGTCGACGTGTCTTGAATGCTCGATTCTCCCCTCTTTTAATCCCTTTTTACAAGGTAAAAGCCTTCTGGTTCTGATATATTTGTAAAGTTGAATTGCAAGTTTATTGAAAGGTATCGTCTATGCTGAGAAACGAGTTTCACAATCCCGTTCATAACAGTTGTATGTGAACTCGTATTAATTCGGTCCAAACTTATTCATGTCTTCTGTGAAGTTGATGAGAAGAAAAGGAAAAAAATGAATGATTTGGGTTTGGTTATAATACTTTGTTGATTATGTTGTGGTTAGAGGACCAGTGGGAAACCAAAGCAGCCACTGGAAAAGGAAAAGGCAGGGAAGTAAGTTGTTTGCAGTGCAGTAGAAGCTCGTGTTAGCTTTTTGGAAGGACAGGAGATGGCCCACCGTATTGACTAACAGAGGATAAAGCAAAGCAGCAAAGGGGCCGCATTGAGGCGTATTGCTTGCTGCTGTTGCTGCTGCTGCTGCTCGGCTAACCCCGCCGTACACGACGAGTGAGACTGCGGCGGGCTCATTTAAAATGTTATGAATCAGTAAAAGGGGGAA

mRNA sequence

ATGTCTCTTTGCTTTCCCCGTAATTGGTCGAGAAAAGCTCAGGCAGCCCAGATCGCCGGCGCCGGAAAAAGGACACGTCGGAGGGGAGTGGTGGGATCTAGTGAAATGGAGGGGAAGAGCAGAAAAACACGAATTTGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAATGTTGCTCTTGCCGATGACATCCTCTCTCGGACTTTCAATTGCAGCCAAGGGAGGGCGTTCCTTTTCAACAGCGTAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCTGTTGCGGAGAACTTCTTGGATGGAAATATGTAACTACACATGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAGGCTTATCCTAGTTCAAGCGATATGGATAATCCTTAGTGAGTTTCTCAGAATAAGGAAATTGAAGCATACATGTCAAAGTGTTGTATGACCATAATCTATGATATCATAAGATTTTTATGTGGAGTCGACGTGTCTTGAATGCTCGATTCTCCCCTCTTTTAATCCCTTTTTACAAGGTAAAAGCCTTCTGGTTCTGATATATTTGTAAAGTTGAATTGCAAGTTTATTGAAAGGTATCGTCTATGCTGAGAAACGAGTTTCACAATCCCGTTCATAACAGTTGTATGTGAACTCGTATTAATTCGGTCCAAACTTATTCATGTCTTCTGTGAAGTTGATGAGAAGAAAAGGAAAAAAATGAATGATTTGGGTTTGGTTATAATACTTTGTTGATTATGTTGTGGTTAGAGGACCAGTGGGAAACCAAAGCAGCCACTGGAAAAGGAAAAGGCAGGGAAGTAAGTTGTTTGCAGTGCAGTAGAAGCTCGTGTTAGCTTTTTGGAAGGACAGGAGATGGCCCACCGTATTGACTAACAGAGGATAAAGCAAAGCAGCAAAGGGGCCGCATTGAGGCGTATTGCTTGCTGCTGTTGCTGCTGCTGCTGCTCGGCTAACCCCGCCGTACACGACGAGTGAGACTGCGGCGGGCTCATTTAAAATGTTATGAATCAGTAAAAGGGGGAA

Coding sequence (CDS)

ATGTCTCTTTGCTTTCCCCGTAATTGGTCGAGAAAAGCTCAGGCAGCCCAGATCGCCGGCGCCGGAAAAAGGACACGTCGGAGGGGAGTGGTGGGATCTAGTGAAATGGAGGGGAAGAGCAGAAAAACACGAATTTGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAATGTTGCTCTTGCCGATGACATCCTCTCTCGGACTTTCAATTGCAGCCAAGGGAGGGCGTTCCTTTTCAACAGCGTAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCTGTTGCGGAGAACTTCTTGGATGGAAATATGTAACTACACATGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAGGCTTATCCTAGTTCAAGCGATATGGATAATCCTTAG

Protein sequence

MSLCFPRNWSRKAQAAQIAGAGKRTRRRGVVGSSEMEGKSRKTRIWVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSDMDNP

Homology

[Close]

BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot
Match: Q9FN32 (Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.4e-41
Identity = 75/115 (65.22%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           +F VELEGRSY CR+C  ++AL DD++SR+F+C +G+A+LFN  VN++ GP EERLMLSG
Sbjct: 4   IFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAY 162
           MHTV DIFCCCCG+ +GWKY + H+K QKYKEGKFVLER RIV+E+  DL+ E Y
Sbjct: 64  MHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEI--DLSTEVY 116

[Close]

BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot
Match: P59234 (Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-33
Identity = 59/102 (57.84%), Postives = 85/102 (83.33%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           +F++ LEG+ YSC++C  ++AL+++I+S++F+C  G+A+LF+ VVNVTSG  E R+M++G
Sbjct: 4   LFVLTLEGKIYSCKHCGTHLALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMMMTG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRI 149
           MHTV DIFC CCG ++GWKY T H+K QKYKEGK VLER++I
Sbjct: 64  MHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLERFKI 105

[Close]

BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot
Match: Q9SR97 (Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 5.7e-33
Identity = 58/103 (56.31%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           +F+++LEG  YSC+YC  + A+ +DI+S++F+C  GRA+LF++VVNVT G KE R+M++G
Sbjct: 4   LFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIV 150
            HTV DIFC  CG L+GWKY   +DK QKYKEGKF+LER++++
Sbjct: 64  WHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot
Match: Q9C777 (Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.3e-31
Identity = 57/102 (55.88%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           +FLV LEG+SYSC++C  N+AL DD++S++F    G+A+LF+ VVNV +G KE+R+M++G
Sbjct: 4   LFLVNLEGKSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRI 149
           MHTV DI+C  CG  +GWKY    +K QKYKEGK VLER+++
Sbjct: 64  MHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 105

[Close]

BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot
Match: Q9LY56 (Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.0e-29
Identity = 55/102 (53.92%), Postives = 76/102 (74.51%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           VF+V+LEG  Y C+ C  +++   DI+S++F C  GRA+LFN+VVNV+ G KE+R+M++G
Sbjct: 4   VFMVDLEGNIYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMMITG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRI 149
           +H V DIFC  CG  +GWKY   H+K QKYKEGK VLE ++I
Sbjct: 64  LHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKI 105

[Close]

BLAST of CmaCh18G003870 vs. ExPASy TrEMBL
Match: A0A6J1K1C3 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111490199 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG
Sbjct: 4   VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 166
           MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD
Sbjct: 64  MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 123

Query: 167 MDNP 171
           MDNP
Sbjct: 124 MDNP 127

[Close]

BLAST of CmaCh18G003870 vs. ExPASy TrEMBL
Match: A0A6J1GSW9 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111457237 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.6e-67
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG
Sbjct: 4   VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 166
           MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD
Sbjct: 64  MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 123

Query: 167 MDNP 171
           MDNP
Sbjct: 124 MDNP 127

[Close]

BLAST of CmaCh18G003870 vs. ExPASy TrEMBL
Match: A0A6J1KNK6 (Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111495802 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62
Identity = 111/124 (89.52%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           VFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLMLSG
Sbjct: 4   VFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 166
           MHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNG+A+P SSD
Sbjct: 64  MHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPGSSD 123

Query: 167 MDNP 171
           M+NP
Sbjct: 124 MENP 127

[Close]

BLAST of CmaCh18G003870 vs. ExPASy TrEMBL
Match: A0A6J1EGK2 (Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111434136 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62
Identity = 111/124 (89.52%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           VFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLMLSG
Sbjct: 4   VFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 166
           MHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNG+A+P SSD
Sbjct: 64  MHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPGSSD 123

Query: 167 MDNP 171
           M+NP
Sbjct: 124 MENP 127

[Close]

BLAST of CmaCh18G003870 vs. ExPASy TrEMBL
Match: A0A6J1CHK2 (Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111010960 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.1e-61
Identity = 109/124 (87.90%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           VFLVELEGRSY CR+CNNNVALADD+LSRTFNC QGRA+LF++VVNVT+GPKEERLMLSG
Sbjct: 4   VFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 166
           MHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLN +A+P SSD
Sbjct: 64  MHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNADAHPGSSD 123

Query: 167 MDNP 171
           M+NP
Sbjct: 124 MENP 127

[Close]

BLAST of CmaCh18G003870 vs. NCBI nr
Match: XP_022955197.1 (protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955198.1 protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955199.1 protein yippee-like At5g53940 isoform X2 [Cucurbita moschata] >XP_022994493.1 protein yippee-like At5g53940 isoform X1 [Cucurbita maxima] >XP_022994495.1 protein yippee-like At5g53940 isoform X2 [Cucurbita maxima] >XP_023543017.1 protein yippee-like At5g53940 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543018.1 protein yippee-like At5g53940 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6573285.1 Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012450.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 265.4 bits (677), Expect = 3.4e-67
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG
Sbjct: 4   VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 166
           MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD
Sbjct: 64  MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 123

Query: 167 MDNP 171
           MDNP
Sbjct: 124 MDNP 127

[Close]

BLAST of CmaCh18G003870 vs. NCBI nr
Match: XP_022927222.1 (protein yippee-like At5g53940 [Cucurbita moschata] >XP_023001759.1 protein yippee-like At5g53940 [Cucurbita maxima] >XP_023519081.1 protein yippee-like At5g53940 [Cucurbita pepo subsp. pepo] >KAG7019603.1 Protein yippee-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 248.8 bits (634), Expect = 3.3e-62
Identity = 111/124 (89.52%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           VFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLMLSG
Sbjct: 4   VFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 166
           MHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNG+A+P SSD
Sbjct: 64  MHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPGSSD 123

Query: 167 MDNP 171
           M+NP
Sbjct: 124 MENP 127

[Close]

BLAST of CmaCh18G003870 vs. NCBI nr
Match: XP_022140248.1 (protein yippee-like At5g53940 [Momordica charantia])

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 109/124 (87.90%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           VFLVELEGRSY CR+CNNNVALADD+LSRTFNC QGRA+LF++VVNVT+GPKEERLMLSG
Sbjct: 4   VFLVELEGRSYRCRFCNNNVALADDVLSRTFNCRQGRAYLFSNVVNVTAGPKEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 166
           MHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLN +A+P SSD
Sbjct: 64  MHTVEDIFCCCCGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNADAHPGSSD 123

Query: 167 MDNP 171
           M+NP
Sbjct: 124 MENP 127

[Close]

BLAST of CmaCh18G003870 vs. NCBI nr
Match: XP_004146613.1 (protein yippee-like At5g53940 isoform X1 [Cucumis sativus] >KGN64700.1 hypothetical protein Csa_013910 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 2.4e-60
Identity = 109/124 (87.90%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           VFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLMLSG
Sbjct: 4   VFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 166
           MH VEDIFCC CG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNG+A+P SSD
Sbjct: 64  MHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPGSSD 123

Query: 167 MDNP 171
           M+NP
Sbjct: 124 MENP 127

[Close]

BLAST of CmaCh18G003870 vs. NCBI nr
Match: XP_008442812.1 (PREDICTED: protein yippee-like At5g53940 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 3.1e-60
Identity = 108/124 (87.10%), Postives = 120/124 (96.77%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           +FLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLMLSG
Sbjct: 4   IFLVELEGRSYRCRFCNNNVALADDVLSRTFNCSQGRAYLFSNVVNITSGPKEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAYPSSSD 166
           MH VEDIFCC CG++LGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNG+A+P SSD
Sbjct: 64  MHIVEDIFCCICGQILGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGDAHPGSSD 123

Query: 167 MDNP 171
           M+NP
Sbjct: 124 MENP 127

[Close]

BLAST of CmaCh18G003870 vs. TAIR 10
Match: AT5G53940.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 169.1 bits (427), Expect = 3.1e-42
Identity = 75/115 (65.22%), Postives = 95/115 (82.61%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           +F VELEGRSY CR+C  ++AL DD++SR+F+C +G+A+LFN  VN++ GP EERLMLSG
Sbjct: 4   IFTVELEGRSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMMEDLNGEAY 162
           MHTV DIFCCCCG+ +GWKY + H+K QKYKEGKFVLER RIV+E+  DL+ E Y
Sbjct: 64  MHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEI--DLSTEVY 116

[Close]

BLAST of CmaCh18G003870 vs. TAIR 10
Match: AT3G08990.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 142.1 bits (357), Expect = 4.1e-34
Identity = 58/103 (56.31%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           +F+++LEG  YSC+YC  + A+ +DI+S++F+C  GRA+LF++VVNVT G KE R+M++G
Sbjct: 4   LFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIV 150
            HTV DIFC  CG L+GWKY   +DK QKYKEGKF+LER++++
Sbjct: 64  WHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of CmaCh18G003870 vs. TAIR 10
Match: AT3G08990.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 142.1 bits (357), Expect = 4.1e-34
Identity = 58/103 (56.31%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           +F+++LEG  YSC+YC  + A+ +DI+S++F+C  GRA+LF++VVNVT G KE R+M++G
Sbjct: 4   LFVIDLEGLVYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIV 150
            HTV DIFC  CG L+GWKY   +DK QKYKEGKF+LER++++
Sbjct: 64  WHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106

[Close]

BLAST of CmaCh18G003870 vs. TAIR 10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein )

HSP 1 Score: 138.7 bits (348), Expect = 4.5e-33
Identity = 58/102 (56.86%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           +F+V LEG+ YSC++C  ++A  +DI+S++F+C  G+A+LFN V NV+ G  EERLM++G
Sbjct: 4   LFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLMMTG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRI 149
            HTV DIFC  CG ++GWKY T H+K QKYKEGK VLER++I
Sbjct: 64  KHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKI 105

[Close]

BLAST of CmaCh18G003870 vs. TAIR 10
Match: AT2G40110.2 (Yippee family putative zinc-binding protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-32
Identity = 57/100 (57.00%), Postives = 78/100 (78.00%), Query Frame = 0


Query: 47  VFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSG 106
           +F+V LEG+ YSC++C  ++A  +DI+S++F+C  G+A+LFN V NV+ G  EERLM++G
Sbjct: 4   LFVVNLEGKIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEERLMMTG 63

Query: 107 MHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERW 147
            HTV DIFC  CG ++GWKY T H+K QKYKEGK VLER+
Sbjct: 64  KHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERF 103

The following BLAST results are available for this feature:

BLAST of CmaCh18G003870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN32	4.4e-41	65.22	Protein yippee-like At5g53940 OS=Arabidopsis thaliana OX=3702 GN=At5g53940 PE=2 ...	[more]
P59234	1.5e-33	57.84	Protein yippee-like OS=Solanum tuberosum OX=4113 PE=2 SV=1	[more]
Q9SR97	5.7e-33	56.31	Protein yippee-like At3g08990 OS=Arabidopsis thaliana OX=3702 GN=At3g08990 PE=2 ...	[more]
Q9C777	5.3e-31	55.88	Protein yippee-like At3g11230 OS=Arabidopsis thaliana OX=3702 GN=At3g11230 PE=2 ...	[more]
Q9LY56	5.0e-29	53.92	Protein yippee-like At3g55890 OS=Arabidopsis thaliana OX=3702 GN=At3g55890 PE=2 ...	[more]

BLAST of CmaCh18G003870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K1C3	1.6e-67	100.00	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111490199 PE=3 SV=1	[more]
A0A6J1GSW9	1.6e-67	100.00	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111457237 PE=3 SV=1	[more]
A0A6J1KNK6	1.6e-62	89.52	Protein yippee-like OS=Cucurbita maxima OX=3661 GN=LOC111495802 PE=3 SV=1	[more]
A0A6J1EGK2	1.6e-62	89.52	Protein yippee-like OS=Cucurbita moschata OX=3662 GN=LOC111434136 PE=3 SV=1	[more]
A0A6J1CHK2	5.1e-61	87.90	Protein yippee-like OS=Momordica charantia OX=3673 GN=LOC111010960 PE=3 SV=1	[more]

BLAST of CmaCh18G003870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022955197.1	3.4e-67	100.00	protein yippee-like At5g53940 isoform X1 [Cucurbita moschata] >XP_022955198.1 pr...	[more]
XP_022927222.1	3.3e-62	89.52	protein yippee-like At5g53940 [Cucurbita moschata] >XP_023001759.1 protein yippe...	[more]
XP_022140248.1	1.1e-60	87.90	protein yippee-like At5g53940 [Momordica charantia]	[more]
XP_004146613.1	2.4e-60	87.90	protein yippee-like At5g53940 isoform X1 [Cucumis sativus] >KGN64700.1 hypotheti...	[more]
XP_008442812.1	3.1e-60	87.10	PREDICTED: protein yippee-like At5g53940 [Cucumis melo]	[more]

BLAST of CmaCh18G003870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53940.1	3.1e-42	65.22	Yippee family putative zinc-binding protein	[more]
AT3G08990.1	4.1e-34	56.31	Yippee family putative zinc-binding protein	[more]
AT3G08990.2	4.1e-34	56.31	Yippee family putative zinc-binding protein	[more]
AT2G40110.1	4.5e-33	56.86	Yippee family putative zinc-binding protein	[more]
AT2G40110.2	2.9e-32	57.00	Yippee family putative zinc-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004910	Yippee/Mis18/Cereblon	PFAM	PF03226	Yippee-Mis18	coord: 57..148 e-value: 3.3E-12 score: 46.5
IPR039058	Yippee family	PANTHER	PTHR13848	PROTEIN YIPPEE-LIKE CG15309-RELATED	coord: 47..163
None	No IPR available	PANTHER	PTHR13848:SF74	PROTEIN YIPPEE-LIKE	coord: 47..163
IPR034751	Yippee domain	PROSITE	PS51792	YIPPEE	coord: 55..152 score: 46.969284

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G003870.1	CmaCh18G003870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0046872	metal ion binding