CmaCh18G002940 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh18G002940
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr18: 1559317 .. 1563527 (+)
RNA-Seq ExpressionCmaCh18G002940
SyntenyCmaCh18G002940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGCATTACTAGCAATGCACCAGTCATCTTCAACCTCAAGCATGGATTTGAAGGTAGATAGAGAGCTGATTTGGTCCTTGTTATCCGAAACAGAGCAATTAGCAGCAGGGTGGTTGAGATGGTTGTGAGTGTTGTTACTAGTCCAGGAAGCAGAGCCTTCATCCTCTCGATTCTCCATCCAAACGACGCTCCCAACTCCGGAAATCATAATGAAGAAGAGGGCAGGCGTTGAGTTTTGAGTGTTCTTTCCAGGTTGGGTTCAAATGGGTTTCTTGGGAATGGGAAAGGAAATGGGGGAAGAAAGCTGACAGAAAGAGATAACTGTCAGTGAGGTGGGAAGGAAAATGAGAGAGAGAGAGAGAAGAAGAAGAAGAAGAAGAAGATGAACTGAAGGGAAGAAAAGAAGAGAAGGTTGCAGAAGGAAAAGGGTATTATCTTTCTGTTTTTCTTTTTTCCTTTTGGGTTTTGTTTTTGTTTGTTTCAAATTCAACCTTTAGTTTGTTATTTTGCAGAACTGAGGCGAAAGATAGGAGAGGAAAGCAGTAAGGTATCCTTTCTTTTTTCCTTTTCTTTTTTATTTTTTTTATATGTGCATATACTTTTTTTGTTGCGATTTTTTGGGGCAAACAAAACAATCACTGGAACGTTACACAACGTTGCTTTCTACAGAGTAATAAGTTTCCCTATCCAATTTTCTTAGCAGATTTTTGAGGTTTATTTATTTATTTTGATAAAGATGCTCTCTCCCCAAGAGCATTTTCAAATGATTTCTAATACGAAATTAAAAATTTAAGAAAATTTATTAAACATCTTTTTTAGCTATTTATTAGACAAAAATTTTGAAAGTTGGTGCAGGTTAAATTTGTAGTTTAACCAATTATTATTTTAAACTTCGTTAAGTTATAATTAATTTTGTTTTTAAGATTCTGAATATATATTCTTACTCATTGTTAACAATTGATTTTGTGAAAAAGACATAAAAGTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTAAGAATTCGGGAAGGTTTATTTTGATGATCAATTTCATATATTAATCGAACTCAATTTTGTGTAAAGCTTGATTTTTTTTTGTTGAAATTTGGGAGCATCAAAAGATTTCTGCTTTCTTTTTATTAAAATTAGGAGAAAATTTAGTGATTCCTTTTTTTTTTTTAATCTAAAAAAGAAGACCCTAAGTTCAAGCCCAACCCATAAGTCCTTGTCTAATTAATTAGTTAAGTTGGTTAATAAATCACGGAGTAGAGTATGAAAAAAAAAAAATGCATAACCTTCAAATTTCTGTCAACGCTCCAGGATGAAGATCGTTAGGAGGGAGGGAAGTTTCATATAGGTTAATTAAGAGGTTGAGTTTACAAGTGAGAAATATAACTCTGTTATAGTATGATGTCTTTTGGGGAAAGAGAGTTTATGTTCAAAGTAGACATTATCATAATATTGTAGAGAGTTGTGGTTACTAACATGGTAGTAGATTCATGCTCTTAATTTAGTCATGTCAATAGAATTTTCAAATGTCGAACAAAGAAGTTGTGAGATCCTAAGGTGTAGTCAAAAGCGAACAAAGGATGTATTTTGTTCAAGGAGTTTAGAAGAGTCGAGTCTCGATTAAGGAGAGGGAGCTTATGTTCAAAATGGATAATATAATTGTGGGAGCTTGTAATTTCTAACCCCTATTTTTAATTTGAAAAACACTTGGGCATACTGCGTTAATAACGTAACAGTCCCCATCTGAAGACAACTCTCTGTGTTTCTGCCATGGCTTTAATTCAGCATCACACACCAACCAGGAACAGTATTCTCCATGTCCTTAACCTAATTTCAGCCTCTGCAACTTGAACTACACAAACTTAAATTGGAAGAAGACAAGACCCTCTAAAGCAGAGAATAAAATTTTAAGTTGATAATGTAAGCCCATGCATCTCGTGAAAGCCTTGGTTTTCACCGCACCTACTCTAGATCCCTTCAGTTACCCTCCATTTTCCTTTGCCTTCTTCCTCTTCCAGACCCTTGAATTTTTTGACAAACAACCACCGGTGTGAGTTCTGTTGTAACCAACCAAAAGTGAAGCCATGAGAGTTCATGCTCAAAGTGGACAATATCATACTATTATGGAGAGTCGTGGTTTCTATCAACTGCAACAATAAAATATTTCTATTTTAAAAGATGTCATTGAAAGAAAGAGCTTGCAAAGTTCAGTTTTTAAGTCATTGTTTACGTCAAGGGAGTCATTGTTAACGTCAAGTTCAGGCCCTTGCAAGTACTTAAGTTGTAAATGACTATTGGGAAGGAGTTTCACATTGGCTAATTAAGAGGTTGATCATGAATTTATAAGTAAAGAAACACATCTCTAACTTTTTAGAAAAACAAAAAACAAAGTTACGAGAACTTGTCCTCAAAGTGGACAATATTATAATATTATCGTGGTTCCTAACATGAGCAGGGAAAAATAATGGGGGACTTATGGATCATTGTAGATCTACGAGAACTTGGTTAACTAAGGATCGTAGTTTCTAACATGAGAATTTGGCTAATTAAGGATGGTAGTTCCTAACACGAGAACTTGTACTAACACAAGTGAGACTTCTGGATCATTGGAGGCAGAAGGCATAAGGGATATACATGCTTGAGATTGATTCAAATCTCAATTTGAGGAGATGTGTGCGATGGCTCAGCAGAAAGAATGGGGGGACAAAGAGTATTAAATGAGGCTGCAGAAAAATGGCGTCATTAAACATTACTGGAGCACCGTCGTGAAGGACAGCAGCCATTGACAGAGGCCTTCTTTTTAAAAAAATTTCTTTTGCTTTGAAGAAGAGACCCCACTTTGCAAATTGTTTAATAAATGTTGACTCATTCTATACCCACAACTTTATAACTTGTTTGGATTGACTTTCTCATTCCAAATAGACGTCAAGGAAGACAAATCACACGCAACTTATCTTAAAATATTTTTAAGATTTATTTCGGTTTGAGTTCACCTAGAATTTTTTTCAATGAACCCAATATTCGAACCAAATATTTTCGGTTTCAAAAACTCAACCCAACCTTAAATGCTAACTCAACTCATCCTAACCCAATTCCTATAATTCAGGTTGGGTTAGTTGTCGAGTTCATGTACACCCCTAGATAGAAGCAAGTGTTTGTTTGACTTATATTTTGGGTTTCAAAAACTCAACTCAACCTTAAATGCTAACTCAACCCATCCTAACTCAATTCATATAATTCAGGTTGGGTTAGTTGTATACCCCTAGATAGAAGCAAGTGTTTGTTTGACTTATTGATGCTCAAAAAATCATAATCCTATTTTAGTTAATTAATCTTTTAAACATTACAATCTATCAAATCAAAAAATATGTTTAGTTATCAAAGTTTGTTACAGAAGAAAGATTCTAGTTTCTATAAATGGATTGCTTTGATTTTTCATAGGAGAGTGAGCAGAATGTTTGGAAATAATTATTACAGAGCATCTCGTGACACTTCTGAACACCTGCCCCTAAAAGAGAGAAATCATGGTGATAATGAAGAAAAAACAAAGCAAATTAAAGAATTTGGATATGCTTTCTTTAGGGGAGAAAAACACACATCGGAGACGGCTAAACTTGGAAAAAATTAATAAAACTTTTGGGTGAAAGAATTGGTATGAATATCTATCATACAAAGCACTCTAAAATAATGCTCCACTATAAACTCTCTGTTGAGGAGATGTAACAGAATATCTCACGGCATAAGGCTAGAAAAGAAATGTGCATCCACACTCTAGCAAACAGGGTAAAAGTAGAAAGATGGCAGAGAAAATTCGTGGCAAAAAAAAAAAAAAAAAAAAAAACTGACATTTTAGTAGGTATCAATCTTTCAGGATTAGGTGTCTAATTCCCTTGCAGAAGATTGGTCGATTTCCTTTCTAGATGCCTCCCAAAGCAGTTGTTCTATTCCAAGCTTTCTGAGCTCTACAAGACCTCGTTCGACTGCCAAAGGGATATGAGACTTTAAGCTAATTCATGAAGTTCTATACAATTGTTCTACAGAATATAAGTTACATTCCAGATGATAGACATCGAAGTAATCTGAGATTTCCGGACAAACAAATTACATGTACATTTATATTATTTTCAGATAGAATCCAACTCCCTATATTGA

mRNA sequence

ATGGAGGGCATTACTAGCAATGCACCAGTCATCTTCAACCTCAAGCATGGATTTGAAGGAAGCAGAGCCTTCATCCTCTCGATTCTCCATCCAAACGACGCTCCCAACTCCGGAAATCATAATGAAGAAGAGGGCAGGCAACTGAGGCGAAAGATAGGAGAGGAAAGCAGTAAGACAAAAATTTTGAAAGTTGGTGCAGAATTCGGGAAGATAGAATCCAACTCCCTATATTGA

Coding sequence (CDS)

ATGGAGGGCATTACTAGCAATGCACCAGTCATCTTCAACCTCAAGCATGGATTTGAAGGAAGCAGAGCCTTCATCCTCTCGATTCTCCATCCAAACGACGCTCCCAACTCCGGAAATCATAATGAAGAAGAGGGCAGGCAACTGAGGCGAAAGATAGGAGAGGAAAGCAGTAAGACAAAAATTTTGAAAGTTGGTGCAGAATTCGGGAAGATAGAATCCAACTCCCTATATTGA

Protein sequence

MEGITSNAPVIFNLKHGFEGSRAFILSILHPNDAPNSGNHNEEEGRQLRRKIGEESSKTKILKVGAEFGKIESNSLY
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G002940.1CmaCh18G002940.1mRNA