CmaCh18G001040 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGTTAGAATTTCAAGGAGGAATTGATTTCATAAATTACAGGTCGATTCTTTGGTCTCTTTGTTCCGTTGGTCGTTTCTCGGTCGGAAGGCGATTCCGGCCGGTGGCCGCGGACCACGATTTCGTAGTCTTGGTGTTCGAAGCCCTCTAATGAACTCTTTCGAGAAAACGCCTGAAAGGCGCTTACCTATTTATTCCGATGGCTCTCCCTCTTCTTACGGTAATAATCAATCCCCTCTCGATCTTGGCGCCGCTCTGTTCATCTAAATCGATGGCGATTTCATTTTTGCAGGTAAAGATCATTCAAAATTGGGGCACAAGAAGCAATTAATCAGGAAACGAGGCGGATTTGTATTTCGAATTTACGAGCATGGTAAGGATCGAAAGTTTTTGCTGTCCAAATTTATTGCACACCACTTGTTTGTAGAAATGCCACCTGAAATTTTCGCATATATTATGATTGAATCAGCGTAAACTTGTGTTTTTTTGTGAATCTGCAGTTAAATTGGGGCCTAAATTCTCGGTTACTGCCAAAGGAAAATTGAGATTAGGGGCAAAAATTATACGACAAGGTGGTAGAAAGAACATATTCAAACATGCTTTTGGGATTGTAGAAGGAGAAGAGCTTTTGAAGGCCTCTCAATGTTACTTATCAACAAGCGCAGGACCCATTGCAGGACTTCTTTTCATGTCCACACACAGGGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCCCTTCACCAACTGGAGAACTGATCAAAACTCAGTACAAGGTAACCTTTATATTTAAGCCTTCAGCTGTGGATCATAGGAGATTGCAAATAAATCATGTTTGATTTGATTTGATTTAACCATGTTATGATAAAGTTTTGCTTTCAGAAAATGGAATTTAAAGCATCTTTGATAGAAACTTAATGAACTTTTTGGTTGTTGATTTCAGAAAATGGAAAGTTTTAAAGATTTTAGGATTGGAATTGAACATTCATAGATAGATACAGAATATTTTTGGGTAGTCCTTTTTTTCAAAGAAATCCCCAACTTGTTGTTGGAACAAAGTGATTGGACAAGCTAAAAGTGTCTGGAATCTTTCTGCTTAATACATATCCAGAATTTTGATGATGGCATCTTTGAAACTTTAAGCACCATGTGATGCCAAATTTCCATAAGATGCAAAATTTTTCGTTCGAAAACAATCAAAGCTGCGTATTAGACTCCTGCTTTGAATTCTGACTTTGCCCAGAAAGTAGAACTCCAGCCCGAATAAGGAAGGCGAGAACATCTTTAGCCATTTTGTATCAAAAGTAAAAAGAAATTAGTCTTTAAAAAGTTGAAGAATTTCTCTAGCAGTTAGTTAGGACATGTTCGTGAGCGATTTTGTAATAACGATGACTAAATTGAGTTTGATCATTCCAAAAACACTCTCAAACGTGTTCGTATAAGTGGGGTGTGATTTGATTTTGTGCAGGTTATGATACCATTAAAGAAGGTCATAAAGGCCAACCAAAGCGAGAATGTTAGTGAGCCAGATATGAAGTATATAGAAGTGGTGACGGATGACAACTTTGATTTCTGGTTTATGGGATTCTTGAGATATGAGAAGGCATTTAAAAGTCTCCGGAAGGCCATTTCCATGGCTAACAGATGTTGAAGAAGATGGTTGCATCACATTCTGGTGTGGTTTTTTGAAAGTTAGAAAATTCTTAGGGATTTCACAAACCACATCTTTAGTGTCTCTAAGGCATTGTTATGTATTTTGTAAGATTCAGATGAGTGCTAGTGGGGTTGAATCCTGTGAAATATATATATATATATATATATATATTTGTTAAATTACAAATTGGTCGTTTGAGAACGATAAATTGAATTAGTCTACATGGCTTAATAAAATTATCAAGAATTGTCC ATGGAAGTCGATTCTTTGGTCTCTTTGTTCCGTTGGTCGTTTCTCGGTCGGAAGGCGATTCCGGCCGGTGGCCGCGGACCACGATTTCGTAGTCTTGGTGTTCGAAGCCCTCTAATGAACTCTTTCGAGAAAACGCCTGAAAGGCGCTTACCTATTTATTCCGATGGCTCTCCCTCTTCTTACGGTAAAGATCATTCAAAATTGGGGCACAAGAAGCAATTAATCAGGAAACGAGGCGGATTTGTATTTCGAATTTACGAGCATGTTAAATTGGGGCCTAAATTCTCGGTTACTGCCAAAGGAAAATTGAGATTAGGGGCAAAAATTATACGACAAGGTGGTAGAAAGAACATATTCAAACATGCTTTTGGGATTGTAGAAGGAGAAGAGCTTTTGAAGGCCTCTCAATGTTACTTATCAACAAGCGCAGGACCCATTGCAGGACTTCTTTTCATGTCCACACACAGGGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCCCTTCACCAACTGGAGAACTGATCAAAACTCAGTACAAGGTTATGATACCATTAAAGAAGGTCATAAAGGCCAACCAAAGCGAGAATGTTAGTGAGCCAGATATGAAGTATATAGAAGTGGTGACGGATGACAACTTTGATTTCTGGTTTATGGGATTCTTGAGATATGAGAAGGCATTTAAAAGTCTCCGGAAGGCCATTTCCATGGCTAACAGATGTTGAAGAAGATGGTTGCATCACATTCTGGTGTGGTTTTTTGAAAGTTAGAAAATTCTTAGGGATTTCACAAACCACATCTTTAGTGTCTCTAAGGCATTGTTATGTATTTTGTAAGATTCAGATGAGTGCTAGTGGGGTTGAATCCTGTGAAATATATATATATATATATATATATATTTGTTAAATTACAAATTGGTCGTTTGAGAACGATAAATTGAATTAGTCTACATGGCTTAATAAAATTATCAAGAATTGTCC ATGGAAGTCGATTCTTTGGTCTCTTTGTTCCGTTGGTCGTTTCTCGGTCGGAAGGCGATTCCGGCCGGTGGCCGCGGACCACGATTTCGTAGTCTTGGTGTTCGAAGCCCTCTAATGAACTCTTTCGAGAAAACGCCTGAAAGGCGCTTACCTATTTATTCCGATGGCTCTCCCTCTTCTTACGGTAAAGATCATTCAAAATTGGGGCACAAGAAGCAATTAATCAGGAAACGAGGCGGATTTGTATTTCGAATTTACGAGCATGTTAAATTGGGGCCTAAATTCTCGGTTACTGCCAAAGGAAAATTGAGATTAGGGGCAAAAATTATACGACAAGGTGGTAGAAAGAACATATTCAAACATGCTTTTGGGATTGTAGAAGGAGAAGAGCTTTTGAAGGCCTCTCAATGTTACTTATCAACAAGCGCAGGACCCATTGCAGGACTTCTTTTCATGTCCACACACAGGGTTGCTTTCTGCAGTGAGCAAAGTATCACTTTCCCTTCACCAACTGGAGAACTGATCAAAACTCAGTACAAGGTTATGATACCATTAAAGAAGGTCATAAAGGCCAACCAAAGCGAGAATGTTAGTGAGCCAGATATGAAGTATATAGAAGTGGTGACGGATGACAACTTTGATTTCTGGTTTATGGGATTCTTGAGATATGAGAAGGCATTTAAAAGTCTCCGGAAGGCCATTTCCATGGCTAACAGATGTTGA MEVDSLVSLFRWSFLGRKAIPAGGRGPRFRSLGVRSPLMNSFEKTPERRLPIYSDGSPSSYGKDHSKLGHKKQLIRKRGGFVFRIYEHVKLGPKFSVTAKGKLRLGAKIIRQGGRKNIFKHAFGIVEGEELLKASQCYLSTSAGPIAGLLFMSTHRVAFCSEQSITFPSPTGELIKTQYKVMIPLKKVIKANQSENVSEPDMKYIEVVTDDNFDFWFMGFLRYEKAFKSLRKAISMANRC Homology
BLAST of CmaCh18G001040 vs. ExPASy Swiss-Prot
Match: Q9FTA0 (GEM-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At5g08350 PE=2 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.4e-45 Identity = 88/162 (54.32%), Postives = 117/162 (72.22%), Query Frame = 0
BLAST of CmaCh18G001040 vs. ExPASy Swiss-Prot
Match: Q9FMW4 (Putative GEM-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=At5g23370 PE=3 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 7.0e-45 Identity = 90/171 (52.63%), Postives = 121/171 (70.76%), Query Frame = 0
BLAST of CmaCh18G001040 vs. ExPASy Swiss-Prot
Match: Q9FMW6 (GEM-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=At5g23350 PE=2 SV=2) HSP 1 Score: 179.5 bits (454), Expect = 4.5e-44 Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 0
BLAST of CmaCh18G001040 vs. ExPASy Swiss-Prot
Match: Q9FMW5 (GEM-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=At5g23360 PE=2 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.5e-42 Identity = 87/180 (48.33%), Postives = 119/180 (66.11%), Query Frame = 0
BLAST of CmaCh18G001040 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 2.9e-30 Identity = 64/166 (38.55%), Postives = 103/166 (62.05%), Query Frame = 0
BLAST of CmaCh18G001040 vs. ExPASy TrEMBL
Match: A0A6J1JW54 (GEM-like protein 4 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490232 PE=3 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CmaCh18G001040 vs. ExPASy TrEMBL
Match: A0A6J1GT13 (GEM-like protein 4 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457264 PE=3 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108 Identity = 198/202 (98.02%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of CmaCh18G001040 vs. ExPASy TrEMBL
Match: A0A6J1K5G6 (GEM-like protein 4 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490232 PE=3 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 7.9e-108 Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0
BLAST of CmaCh18G001040 vs. ExPASy TrEMBL
Match: A0A6J1GTE8 (GEM-like protein 4 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457264 PE=3 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 5.7e-106 Identity = 196/202 (97.03%), Postives = 199/202 (98.51%), Query Frame = 0
BLAST of CmaCh18G001040 vs. ExPASy TrEMBL
Match: A0A5D3BH38 (GEM-like protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002760 PE=3 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 5.5e-93 Identity = 179/233 (76.82%), Postives = 196/233 (84.12%), Query Frame = 0
BLAST of CmaCh18G001040 vs. NCBI nr
Match: XP_022994542.1 (GEM-like protein 4 isoform X1 [Cucurbita maxima]) HSP 1 Score: 408.7 bits (1049), Expect = 3.5e-110 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CmaCh18G001040 vs. NCBI nr
Match: XP_023541117.1 (GEM-like protein 4 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 403.3 bits (1035), Expect = 1.5e-108 Identity = 197/202 (97.52%), Postives = 202/202 (100.00%), Query Frame = 0
BLAST of CmaCh18G001040 vs. NCBI nr
Match: XP_022955247.1 (GEM-like protein 4 isoform X1 [Cucurbita moschata]) HSP 1 Score: 402.5 bits (1033), Expect = 2.5e-108 Identity = 198/202 (98.02%), Postives = 201/202 (99.50%), Query Frame = 0
BLAST of CmaCh18G001040 vs. NCBI nr
Match: XP_022994543.1 (GEM-like protein 4 isoform X2 [Cucurbita maxima]) HSP 1 Score: 399.8 bits (1026), Expect = 1.6e-107 Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0
BLAST of CmaCh18G001040 vs. NCBI nr
Match: KAG6572996.1 (GEM-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 397.9 bits (1021), Expect = 6.2e-107 Identity = 194/202 (96.04%), Postives = 200/202 (99.01%), Query Frame = 0
BLAST of CmaCh18G001040 vs. TAIR 10
Match: AT5G08350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 184.5 bits (467), Expect = 1.0e-46 Identity = 88/162 (54.32%), Postives = 117/162 (72.22%), Query Frame = 0
BLAST of CmaCh18G001040 vs. TAIR 10
Match: AT5G23370.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 182.2 bits (461), Expect = 5.0e-46 Identity = 90/171 (52.63%), Postives = 121/171 (70.76%), Query Frame = 0
BLAST of CmaCh18G001040 vs. TAIR 10
Match: AT5G23350.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 179.5 bits (454), Expect = 3.2e-45 Identity = 89/169 (52.66%), Postives = 117/169 (69.23%), Query Frame = 0
BLAST of CmaCh18G001040 vs. TAIR 10
Match: AT5G23360.1 (GRAM domain-containing protein / ABA-responsive protein-related ) HSP 1 Score: 173.7 bits (439), Expect = 1.8e-43 Identity = 87/180 (48.33%), Postives = 119/180 (66.11%), Query Frame = 0
BLAST of CmaCh18G001040 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 133.7 bits (335), Expect = 2.0e-31 Identity = 64/166 (38.55%), Postives = 103/166 (62.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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