CmaCh18G000710 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAAAAACAAAAAACCCTCTCCCCAGAATTCCACGCCTCTCTCTCTCTCTCTCTCCCAAAAAGAAACCCTTTCACAATTTCAGCTCAAACTATCCCACCAAGCTTTAATTCCCACTCTCTATATATTACCCATCACTTCTTTCTTCTCTATACAGATTGGGAGAGTTGGGAGAGATTCAGAGAGAGAGATTGGGAGAGAGATTGAGAGAGATTGAGAGAGAGAGAGGGTTCCCACTCAAAAAGTTTGAATTTTTTTACACCCTTTGAGCTCTACTTTGCAATCCCATTAAAGGGTTACTACCAATTTAGTATTATTAGTTGTTTTTTGACGAACATGTGGATGATGGGTTACAATGACGGCGGAGATTTGAACTTTTCTTCCGATTCATTCAATGCCCGGAAGCTTCGACCTCTCATTCCTCGCCCTCTCTCTTCTCCCTCCACCAACGATTTCTTCTCTCAATTTTATCAAATGGGTACTTTCAAAATCTCTCCTTTTTTGCATTACTTTCCTTCAAATCCCTTAAGATTCACCAGATTTTAATGTTCTGTAGGGACTGATCAGAGCAAGAGAGAGTTGAATAATGCACCACCGCCGCCGGTCGTCGTAAGCTCGCGGTGGAATCCGACGCCGGAGCAGTTGAGATTGCTGGAGGAATTGTACCGCCGGGGGACTCGAACACCGTCCGCCGACCAGATTCAACATATCACCGCTCAGCTCCGCCGTTTTGGGAAGATCGAAGGGAAGAACGTGTTCTATTGGTTTCAGAATCACAAAGCTAGAGAGCGGCAGAAACGCCGCCGTCAGATGGAATCTTCCGACCAGTCGATTTGCGACATTGAAATCCTCGAACGGAAAGATTCAGGTAACAAAGAATCCGACCATTTGAAATGTCTTTTGTTCATGATTTTGTGAAATTTAAGCGATAAAAAAGGAAGAAAATTGATGTGTTTGAGCCCGTGACATAGATTTTGTCGCGAAGAGGCACAAATTTTGTCTTTGGGAGTTGTTCTAAACATTCTATTTGTTTGTTGATATGTAAAGTCGTATTCTTTTTGTCTTACTTTTTGTCAACAGGGTCGGGTAGGACAGTCTATGAAGTTGAACACACCAAGAACTGGCCTACCTCTACAAACTGCCGTACACTTGTGGAGGTTTCTATTTTCTCTCTCACTTTTTTGTGTTCTAATAAAAACCCCATTTTTACAACAAATCATGCTTTATCCTTATGTTTAGCATAAGTTTTCGTGGCTTTACGCTTACTTATATGTTCTCGATCTTCATTTTTCTCTTAATTAGCCAATGTGAGCCTTTAATAATATCCATCTCGGATAAAGTAACGTTGAGTTTCTTCCTAAATAGTTAGTACTATTCGGGTCAACTCTTTTTTTCCATGGATCTTTACTATGAAGATACCTCGAGACTCACAACTTCTTTGTTCGACACCTGAAAATTCTATTGAGCTATTCGGGTCAACTCCGTTTGAGACTTGCAACTTCTTTGTTTGACACCAAAAATTCTATTGAGCTATTTGGGTCGACTCCTTTTCTCCATGGATTTTCACTATGAAGATATCTTCGAGACTCACTCACAACATCTTTGTTCGACACCCGAAAATTCTATTGAGATATCTGCCTTTTCTCTATGGATTTTCACTACGAAGATACAACTTCTTTGTTCAACACCTGAAAATTCTATTGAGCTATCCGAGTCGACTCGTTTTCTCCACGGATCTTCATTACGAGGACACATTTGAGACTCACAACTTTCTTTGTTCGATGCTCGAAAATTCTATTGAGCTATCTGGGTCAACTCCGTTTCTCCTTTTCTCCACGGATTTTTGATGGGAAGACACCTTTGAGACTCACAACTTCTTTATTTGACCACCCGAAAATTCTTTGAGCTATCCGGGTCAACTCCTTTTCTCCATAGATCTTCACTAAGGCTCACAACTTTTTTGTTCGACACTCAAAAATTTCATTAAGCCGGTCTAATAGAGCTGATCAACACCTCTGAAACTGAAATAATCTTCATGTTAATTAGTCAACATCGGCTCTCGAACATAGTTTGTCTAGAAGAATGTTTGGTGATGATTATTCAAACCATCCCATGCATGAAATGATGAGGTAATGGGAAGGGTAGCTTTAAGGTGAAAAAGTTATTATAGCGTGTGATAAAGAAAAGATGTTGAAGAAGGAAGATGGAAGGGAACAAAAAGCTTAGCTTAGTTTGTTGGGAAATGAAAAGGCTCCAAAAGCTGCATTCCTTCCTTTCTGTCGGCTCTATACCTCCCTCCCCCTCTTATCAAACTTTGAACATCATCTCCTCTGCGTCTTTTCATGCCATCACGACCCTCCACAATAAGTATGATGTTGTTCAATTTGAGCATAACCTCTCGTGCCTTTGCTTTGGGCTTTCTTAAAAGGGGCTCGCATTACTTACTTACAAACCCATGATCATTCTCTAAATTCTCACAGGAATCTCTTCCAATTCAACGCGCGCCAAAAGATAGCACCAGGACACAAAATGGATGCCTCCATTCTTCGGCAGCCACTCCCGGCGGTGTCGGTGGCGTTGGCATTGGCATTGGAGGCTGCAGGCAACTGATGATGAACACCGCCCCCATCGCCGCCACCACCACGACCGCCACAGTTACAACAATAATGCACCAAAATGATGGGGTTGAAGGATTAGAAGAATCAGAAACCCTACAACTTTTTCCATTGTGCAGTGAGACAAGAAATGGTGGGTGTGAAACAGTGGAAAGCTCAGGGATGAACAGTGCTAATGTGATGACTCCACTTCAGTTCTTTGAATTCCTTCCATTGAAGAATTGA CAAAAACAAAAAACCCTCTCCCCAGAATTCCACGCCTCTCTCTCTCTCTCTCTCCCAAAAAGAAACCCTTTCACAATTTCAGCTCAAACTATCCCACCAAGCTTTAATTCCCACTCTCTATATATTACCCATCACTTCTTTCTTCTCTATACAGATTGGGAGAGTTGGGAGAGATTCAGAGAGAGAGATTGGGAGAGAGATTGAGAGAGATTGAGAGAGAGAGAGGGTTCCCACTCAAAAAGTTTGAATTTTTTTACACCCTTTGAGCTCTACTTTGCAATCCCATTAAAGGGTTACTACCAATTTAGTATTATTAGTTGTTTTTTGACGAACATGTGGATGATGGGTTACAATGACGGCGGAGATTTGAACTTTTCTTCCGATTCATTCAATGCCCGGAAGCTTCGACCTCTCATTCCTCGCCCTCTCTCTTCTCCCTCCACCAACGATTTCTTCTCTCAATTTTATCAAATGGGGACTGATCAGAGCAAGAGAGAGTTGAATAATGCACCACCGCCGCCGGTCGTCGTAAGCTCGCGGTGGAATCCGACGCCGGAGCAGTTGAGATTGCTGGAGGAATTGTACCGCCGGGGGACTCGAACACCGTCCGCCGACCAGATTCAACATATCACCGCTCAGCTCCGCCGTTTTGGGAAGATCGAAGGGAAGAACGTGTTCTATTGGTTTCAGAATCACAAAGCTAGAGAGCGGCAGAAACGCCGCCGTCAGATGGAATCTTCCGACCAGTCGATTTGCGACATTGAAATCCTCGAACGGAAAGATTCAGGGTCGGGTAGGACAGTCTATGAAGTTGAACACACCAAGAACTGGCCTACCTCTACAAACTGCCCCACTCCCGGCGGTGTCGGTGGCGTTGGCATTGGCATTGGAGGCTGCAGGCAACTGATGATGAACACCGCCCCCATCGCCGCCACCACCACGACCGCCACAGTTACAACAATAATGCACCAAAATGATGGGGTTGAAGGATTAGAAGAATCAGAAACCCTACAACTTTTTCCATTGTGCAGTGAGACAAGAAATGGTGGGTGTGAAACAGTGGAAAGCTCAGGGATGAACAGTGCTAATGTGATGACTCCACTTCAGTTCTTTGAATTCCTTCCATTGAAGAATTGA ATGTGGATGATGGGTTACAATGACGGCGGAGATTTGAACTTTTCTTCCGATTCATTCAATGCCCGGAAGCTTCGACCTCTCATTCCTCGCCCTCTCTCTTCTCCCTCCACCAACGATTTCTTCTCTCAATTTTATCAAATGGGGACTGATCAGAGCAAGAGAGAGTTGAATAATGCACCACCGCCGCCGGTCGTCGTAAGCTCGCGGTGGAATCCGACGCCGGAGCAGTTGAGATTGCTGGAGGAATTGTACCGCCGGGGGACTCGAACACCGTCCGCCGACCAGATTCAACATATCACCGCTCAGCTCCGCCGTTTTGGGAAGATCGAAGGGAAGAACGTGTTCTATTGGTTTCAGAATCACAAAGCTAGAGAGCGGCAGAAACGCCGCCGTCAGATGGAATCTTCCGACCAGTCGATTTGCGACATTGAAATCCTCGAACGGAAAGATTCAGGGTCGGGTAGGACAGTCTATGAAGTTGAACACACCAAGAACTGGCCTACCTCTACAAACTGCCCCACTCCCGGCGGTGTCGGTGGCGTTGGCATTGGCATTGGAGGCTGCAGGCAACTGATGATGAACACCGCCCCCATCGCCGCCACCACCACGACCGCCACAGTTACAACAATAATGCACCAAAATGATGGGGTTGAAGGATTAGAAGAATCAGAAACCCTACAACTTTTTCCATTGTGCAGTGAGACAAGAAATGGTGGGTGTGAAACAGTGGAAAGCTCAGGGATGAACAGTGCTAATGTGATGACTCCACTTCAGTTCTTTGAATTCCTTCCATTGAAGAATTGA MWMMGYNDGGDLNFSSDSFNARKLRPLIPRPLSSPSTNDFFSQFYQMGTDQSKRELNNAPPPPVVVSSRWNPTPEQLRLLEELYRRGTRTPSADQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSDQSICDIEILERKDSGSGRTVYEVEHTKNWPTSTNCPTPGGVGGVGIGIGGCRQLMMNTAPIAATTTTATVTTIMHQNDGVEGLEESETLQLFPLCSETRNGGCETVESSGMNSANVMTPLQFFEFLPLKN Homology
BLAST of CmaCh18G000710 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2) HSP 1 Score: 189.9 bits (481), Expect = 3.7e-47 Identity = 112/193 (58.03%), Postives = 128/193 (66.32%), Query Frame = 0
BLAST of CmaCh18G000710 vs. ExPASy Swiss-Prot
Match: Q9ZVF5 (WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2) HSP 1 Score: 112.8 bits (281), Expect = 5.8e-24 Identity = 62/115 (53.91%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of CmaCh18G000710 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23 Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0
BLAST of CmaCh18G000710 vs. ExPASy Swiss-Prot
Match: Q25AM2 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-21 Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 0
BLAST of CmaCh18G000710 vs. ExPASy Swiss-Prot
Match: Q7XTV3 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2 SV=2) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-21 Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 0
BLAST of CmaCh18G000710 vs. ExPASy TrEMBL
Match: A0A6J1K3K5 (WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111490342 PE=3 SV=1) HSP 1 Score: 528.5 bits (1360), Expect = 1.6e-146 Identity = 266/296 (89.86%), Postives = 266/296 (89.86%), Query Frame = 0
BLAST of CmaCh18G000710 vs. ExPASy TrEMBL
Match: A0A6J1GUZ2 (WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111457162 PE=3 SV=1) HSP 1 Score: 509.2 bits (1310), Expect = 1.0e-140 Identity = 261/296 (88.18%), Postives = 263/296 (88.85%), Query Frame = 0
BLAST of CmaCh18G000710 vs. ExPASy TrEMBL
Match: A0A6J1KJ87 (WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495730 PE=3 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 8.3e-90 Identity = 213/341 (62.46%), Postives = 227/341 (66.57%), Query Frame = 0
BLAST of CmaCh18G000710 vs. ExPASy TrEMBL
Match: A0A6J1E6X5 (WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431341 PE=3 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 9.1e-89 Identity = 212/346 (61.27%), Postives = 226/346 (65.32%), Query Frame = 0
BLAST of CmaCh18G000710 vs. ExPASy TrEMBL
Match: A0A0A0LVV6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042780 PE=3 SV=1) HSP 1 Score: 335.9 bits (860), Expect = 1.6e-88 Identity = 217/392 (55.36%), Postives = 231/392 (58.93%), Query Frame = 0
BLAST of CmaCh18G000710 vs. NCBI nr
Match: XP_022994694.1 (WUSCHEL-related homeobox 1-like [Cucurbita maxima]) HSP 1 Score: 528.5 bits (1360), Expect = 3.4e-146 Identity = 266/296 (89.86%), Postives = 266/296 (89.86%), Query Frame = 0
BLAST of CmaCh18G000710 vs. NCBI nr
Match: KAG7012148.1 (WUSCHEL-related homeobox 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 510.8 bits (1314), Expect = 7.3e-141 Identity = 262/296 (88.51%), Postives = 263/296 (88.85%), Query Frame = 0
BLAST of CmaCh18G000710 vs. NCBI nr
Match: XP_022955094.1 (WUSCHEL-related homeobox 1-like [Cucurbita moschata]) HSP 1 Score: 509.2 bits (1310), Expect = 2.1e-140 Identity = 261/296 (88.18%), Postives = 263/296 (88.85%), Query Frame = 0
BLAST of CmaCh18G000710 vs. NCBI nr
Match: XP_023541174.1 (WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 505.4 bits (1300), Expect = 3.1e-139 Identity = 257/296 (86.82%), Postives = 260/296 (87.84%), Query Frame = 0
BLAST of CmaCh18G000710 vs. NCBI nr
Match: KAG6572967.1 (WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 359.4 bits (921), Expect = 2.7e-95 Identity = 173/174 (99.43%), Postives = 173/174 (99.43%), Query Frame = 0
BLAST of CmaCh18G000710 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 ) HSP 1 Score: 189.9 bits (481), Expect = 2.7e-48 Identity = 112/193 (58.03%), Postives = 128/193 (66.32%), Query Frame = 0
BLAST of CmaCh18G000710 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 112.8 bits (281), Expect = 4.1e-25 Identity = 62/115 (53.91%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of CmaCh18G000710 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 ) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24 Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 0
BLAST of CmaCh18G000710 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 ) HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22 Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of CmaCh18G000710 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 102.8 bits (255), Expect = 4.3e-22 Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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