CmaCh16G011770 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTATTTCATCAGAGGCGACGAAGACTTGGACACACTGAGGGGAAATCCTAAATTCAGAATCAAGCTTATCGTTCTAATTTCGTGTAGATTTCAGTTTTCCGGCGATCGTCGGTTGATTCGATATCTGTTCCGGCGATTTATGTTCGTCATTTCTAGCAATGTCGGTTAGTACTTCGTGAATTTCCTTCTCTTTTCATCGCGTTTGAAGATTCTGATTGCGAAGTGGAAAATCGTTGGGGAAGGATTCCATTGGGTTAGATTTGGACCCTTACTCTGTAGTTTTTCTTTGGAGTTATTACAAATTAGTGCAATGTGCAGCCAAGGGATTAGATCTCTTGTGGTTTATTTTCCCGTTTGATTTTCCCATTTGAGGGTTTTGTATCATGTCGAGATTTTCCCATTCAGTGTATCAAGAATTAGGATTATGTTTAAGCAAATTGGTCCATTTCTATGTTTTGATCGATGAAATGTATTTTGAATCTGTTCCACGTTCGTTCCTCCTACTGAACCTGGACCTGCATAGAAACATACATTCGAAATTAAAACCTGGAACGTCATTCCTGTAATTAATACTTCGAAGTGTGTAATCTTCGCTCCCTTTGGATTACTATTGCTGCTTGGCTTGTTGATGTCCATCGTTTTCTTGGCTGCACCCATGAGATTTTCCTTTTTGCTTTTCATTTCTTTTCTGGCCATAGCTGATTTTTTTTACTCTCTTTCTGACTTATGTTGATCACTGTTCAGCTGTAGCAATGAATTTATGCACCTTCTTGGAGATAGTGGGAGATTTCTTGATCTTTGTTTGAACTGCTTTGTTCTGTATGTGCAGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATCTCAAGGAGTTTTTTTCCTTCTCGGGTGACATTGCATATGTTGAAATGCAGAGGTTATGCAGGTTTTCGTTTCAGTTTATGATATATCTTCTTTTCGTTCAATGTTTTTATTCTTTTGCAGTGAAAGTGAACGGTCTCAAATCGCTTACGTAACCTTTAAGGATGCACAAGGAGCAGAGACTGCCACTCTTTTGTCTGTAAGTTCACTTTGTAGACAATGTCTCTAGGTCGCAGTAATTATAAGTTTCATACCTATTGGCATTTAAGATATAACTCTCAAAGATTCCATTATTAGTGGAGCTGTGAGTCAAAATTGAAATATTGTTGGCAATATGGTTGTTCATGGCTGTTATTAGTGGTCACGTCACATAGCCTTCATCTAGGGAGAGGATGTTCCTTTAAAAACCTCACCTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAACATTTTTTATAAGTGTATGGAAACCTCTCCTAGCAGATGCGTTTTAAAAACCTTGAGGAGAAGTTCGAAAGGAAAAGCCCAAAGAGGACAATATCTGCTAGCAGTGAGCTTGGACCGTTACATCATCATTAGGAAGAGATCAACGAGCGCCTCAACATTTCTTCTTCTGTTCTCTTTTACTTATACCTTACATCATTTCCACCTTCATCCTCGGTGCGAGCCCCAATATCTGTATTAGGTAGATCATGTTGCCATTTTACAATCACATGATGTGTGATCTGAGTGAGCATTTTGCCACGTAACTAGTTAAATGGTCTAAGGGACACGACCTTTGGTGCAAACATTAGGAGGTCAAATTTAGGCTTGATTGCTCTTCTATTATGTGAGAGTATAAGATAGACCTTAGCTGGAAGTTTGTTCTGCATCAATAAAATTGCCCCATTTCTCTTTCCTTGAGATGCATATTGTTTGATTTTTTTTCTCTTACATTCATCACTCGTTATACTTAACATATTAACTAATGAGAAACAGCAATACGAATCGCCCGAGCTAGTTAATTAATGGAGCTCAACTTCTTGTCAGGGAGCGACAATAGTGGATCTTTCTGTCAACATCACTCCATGTCCTGATTATGTGCTCCCTCCTGAAGCTACCGCACCACCCCCTGTAAGATTCTTGGGACTGTTTGTTTTTTGCGCTGCTATGTGTGTCACTTTATGATTTCTCTTAGTTTACCAGCTTATTGTCTTGATTGTTGCAGGCCCCTGGAACTAATGCACCTGGAACGGCTGAATCCGCCTATCAGAAAGCAGAGGATGTGGTTAGCAGTATGCTTGCCAAGGGATTTATCTTGGGCAAAGACGCACTCAACTCTGCAAAGGCATTTGATGAGAAACACCAGTTATCTTCCACAGCTTCAGCCAAAGTAGCTACATTGGATAAAAAAATTGGGTTCACTGAGAAAATTAGCGCTGGAACGGTGTTGGTGGGCGACAAAGTTCGAGAAGTAGACCAGAAGTTTCAGGTTTCAGAGAAGACTAAATCAGCATTTGCAGTTGCAGAAGAGAAAGTTAGCAATGCTGGAGCTGCCATTATGAGTAACCGATATGTAAAGAGTGGGACTAGCTGGGTTGCTGATACTTTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAATCGCGGTGTCGGAAGAAGATCAGAAAAAGAAGACGGTCGAAACTTTGCATCTCCCGGAATCCCCTAAAGCAGCACCTGTGCCCCCTGAGCCTCAACAACGTCCCAAGCCCGAACCCGCTCAAGGTCTGATCCTCTGAATTGTTGTCATGTTTGTTGATATCTATGCCTGAAAGTTCTTGTAGCTGTAATGTGTATTTCCCCTTCAAATCTGGCATGGCTATATATATATATATTAGGATGAAAATATAGAGTAGATTTCTTCCTGAATTAGTGCTCGGACTCTTCATTGCATAAGATATCTTCATCTGCAAGAATTTTAAAACAGCAGATTTTTCATTATTGTCAACAAAGTCTCTCCTCTTTCTACAATGCTCATGTATCAGTGTAGTTCTG TTTATTTCATCAGAGGCGACGAAGACTTGGACACACTGAGGGGAAATCCTAAATTCAGAATCAAGCTTATCGTTCTAATTTCGTGTAGATTTCAGTTTTCCGGCGATCGTCGGTTGATTCGATATCTGTTCCGGCGATTTATGTTCGTCATTTCTAGCAATGTCGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATCTCAAGGAGTTTTTTTCCTTCTCGGGTGACATTGCATATGTTGAAATGCAGAGTGAAAGTGAACGGTCTCAAATCGCTTACGTAACCTTTAAGGATGCACAAGGAGCAGAGACTGCCACTCTTTTGTCTGGAGCGACAATAGTGGATCTTTCTGTCAACATCACTCCATGTCCTGATTATGTGCTCCCTCCTGAAGCTACCGCACCACCCCCTGCCCCTGGAACTAATGCACCTGGAACGGCTGAATCCGCCTATCAGAAAGCAGAGGATGTGGTTAGCAGTATGCTTGCCAAGGGATTTATCTTGGGCAAAGACGCACTCAACTCTGCAAAGGCATTTGATGAGAAACACCAGTTATCTTCCACAGCTTCAGCCAAAGTAGCTACATTGGATAAAAAAATTGGGTTCACTGAGAAAATTAGCGCTGGAACGGTGTTGGTGGGCGACAAAGTTCGAGAAGTAGACCAGAAGTTTCAGGTTTCAGAGAAGACTAAATCAGCATTTGCAGTTGCAGAAGAGAAAGTTAGCAATGCTGGAGCTGCCATTATGAGTAACCGATATGTAAAGAGTGGGACTAGCTGGGTTGCTGATACTTTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAATCGCGGTGTCGGAAGAAGATCAGAAAAAGAAGACGGTCGAAACTTTGCATCTCCCGGAATCCCCTAAAGCAGCACCTGTGCCCCCTGAGCCTCAACAACGTCCCAAGCCCGAACCCGCTCAAGGTCTGATCCTCTGAATTGTTGTCATGTTTGTTGATATCTATGCCTGAAAGTTCTTGTAGCTGTAATGTGTATTTCCCCTTCAAATCTGGCATGGCTATATATATATATATTAGGATGAAAATATAGAGTAGATTTCTTCCTGAATTAGTGCTCGGACTCTTCATTGCATAAGATATCTTCATCTGCAAGAATTTTAAAACAGCAGATTTTTCATTATTGTCAACAAAGTCTCTCCTCTTTCTACAATGCTCATGTATCAGTGTAGTTCTG ATGTCGGTTAAAACTGTTAAAGTCAGCAATGTCTCCTTGGGAGCGTCTGAACGAGATCTCAAGGAGTTTTTTTCCTTCTCGGGTGACATTGCATATGTTGAAATGCAGAGTGAAAGTGAACGGTCTCAAATCGCTTACGTAACCTTTAAGGATGCACAAGGAGCAGAGACTGCCACTCTTTTGTCTGGAGCGACAATAGTGGATCTTTCTGTCAACATCACTCCATGTCCTGATTATGTGCTCCCTCCTGAAGCTACCGCACCACCCCCTGCCCCTGGAACTAATGCACCTGGAACGGCTGAATCCGCCTATCAGAAAGCAGAGGATGTGGTTAGCAGTATGCTTGCCAAGGGATTTATCTTGGGCAAAGACGCACTCAACTCTGCAAAGGCATTTGATGAGAAACACCAGTTATCTTCCACAGCTTCAGCCAAAGTAGCTACATTGGATAAAAAAATTGGGTTCACTGAGAAAATTAGCGCTGGAACGGTGTTGGTGGGCGACAAAGTTCGAGAAGTAGACCAGAAGTTTCAGGTTTCAGAGAAGACTAAATCAGCATTTGCAGTTGCAGAAGAGAAAGTTAGCAATGCTGGAGCTGCCATTATGAGTAACCGATATGTAAAGAGTGGGACTAGCTGGGTTGCTGATACTTTCAATAAGGTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAATCGCGGTGTCGGAAGAAGATCAGAAAAAGAAGACGGTCGAAACTTTGCATCTCCCGGAATCCCCTAAAGCAGCACCTGTGCCCCCTGAGCCTCAACAACGTCCCAAGCCCGAACCCGCTCAAGGTCTGATCCTCTGA MSVKTVKVSNVSLGASERDLKEFFSFSGDIAYVEMQSESERSQIAYVTFKDAQGAETATLLSGATIVDLSVNITPCPDYVLPPEATAPPPAPGTNAPGTAESAYQKAEDVVSSMLAKGFILGKDALNSAKAFDEKHQLSSTASAKVATLDKKIGFTEKISAGTVLVGDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGAAIMSNRYVKSGTSWVADTFNKVAKAAGEVGQKTKEKIAVSEEDQKKKTVETLHLPESPKAAPVPPEPQQRPKPEPAQGLIL Homology
BLAST of CmaCh16G011770 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 2.2e-66 Identity = 147/256 (57.42%), Postives = 190/256 (74.22%), Query Frame = 0
BLAST of CmaCh16G011770 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 324.3 bits (830), Expect = 9.5e-89 Identity = 183/275 (66.55%), Postives = 219/275 (79.64%), Query Frame = 0
BLAST of CmaCh16G011770 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 297.0 bits (759), Expect = 1.6e-80 Identity = 171/281 (60.85%), Postives = 217/281 (77.22%), Query Frame = 0
BLAST of CmaCh16G011770 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 ) HSP 1 Score: 258.1 bits (658), Expect = 8.3e-69 Identity = 147/256 (57.42%), Postives = 190/256 (74.22%), Query Frame = 0
BLAST of CmaCh16G011770 vs. TAIR 10
Match: AT5G16840.3 (binding partner of acd11 1 ) HSP 1 Score: 256.1 bits (653), Expect = 3.2e-68 Identity = 148/258 (57.36%), Postives = 192/258 (74.42%), Query Frame = 0
BLAST of CmaCh16G011770 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 ) HSP 1 Score: 253.8 bits (647), Expect = 1.6e-67 Identity = 147/256 (57.42%), Postives = 190/256 (74.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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