Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGGTCAATTAAGACCAAAATTGTCTTTATGGATGAAATCAGTGAAGGGTTTGGCTGTACTTCCCCTCTTGTAATAATTCATCCTTGTCGATTATGCCCTCCACGCCAAACTGACACTCTCACATACAACACCACACAACAACAACAAACAAATCACTACACGTCTCTCCAATCTCCTCCTCCCTCCTCCCATGGCCACCTCCGACGACGACGAAGTAGAAAAAGAATTACAAGAACACGATGGTGGCTTCTGCCGGAGCCTCTACGGAGTCGGCTCGGTTCTCGACCCGAGAGCCAAATGGGTCCGAGAATGGAACCGGGTCTTCCTCCTCGTCTCCGCCGCTGGCCTCTTCGTGGACCCTCTCTTCCTCTACACGCTCTCCATAAGCGAGTCATGGATGTGCTTGTTTGTTGATGGGTGGTTAGCCATCACCGTCACCGTCCTCCGCTGCACCGCCGACGCCTTCCACCTTTGGAACATGTGGCTCCAGCTCAAGACTGCCACAAGATACTCCTTCGCCGGTGGAGCTGGCACCGCAGCCACGCCGGAGAATAGAGGCCTTAGAGATTCCACCCCACGCGCCGTCGCTCTCCGCTACTTCAAATCCAAAAAAGGCTTCTTCTTTGATCTCTTCGTTATTCTTCCACTTCCACAGGTATCATGCATATAATAATATAAATAAATTTCATAACCAACAATCTTTAGGAATGTTTTTACTTTTATTTTAATAAAATACTATCCAAATTTAAAATTTGCTAAACATAATAAATAATTGTTAGAAAAAAAACTGAAAAATGTCTAGAATTAAATAAATTTTTTCTTTTATTTTATTTATTTACATGAATTAATAGAATGTGGTGTTTATGAAACTCTGATTCTGGGCAGACGAACATGTGATTCTGGGCAGACGAATATAATTATGTTTTTTTTTTTAATTCGGGAATCTATTGGGATTCGATCTTTTTTTTAAAAAATTTAATTTTAAAATCTGTGAAGAATTCCTGACCGTTGGATAATCAATCATTTTTAATATAAATATATTTTCAAAAATTAATATTAATTTAAAATTTTTAGAATAAGTAAAAATGTGCATATTTGCAGGTGGTATTATGGGTAGTAATTCCAAGAATAATGAAAGAAGGATCAGTGACATTGGTGATGACAGTTTTGCTAATAGTATTTCTATTTCAATACTTACCCAAATTGTACCACTCGGTATGCCTGCTGCGGCGCCTCCAAAACCTGTCGGGGTTCATCTTTGGCACGGTCTGGTGGGGCATTGCCCTCAATCTCATTGCTTACTTTGTTGCTGCTCACGTAAGTGAATAATATCATATCATTATGGAGATTTGTGATTCATAACACGATTCTTATTAAACTTGTCTGAATGCAGGCTGCAGGCGCATGCTGGTACCTGTTGGGTGTGCAAAGAGCAGCCAAGTGCCTTAAAGAGCAATGCAGAGCCACGAGCAGCTGTGGGGTGAGGCTGTTGTCATGCAAAGATCGTATCTTTTATGGAGCCACCAAGATGGGAATGGGGAGAGACAGTGCAAGATTTGATTGGGCGAATAACAGGCAACCGAAATTCATGTGTTTGGATACTGCTGACAACTTTAATTATGGAGCTTATAAATGGACTGTTCAGCTTGTTGTCAACCAAAGTCGCTTGGAGAAGATCCTTTTTCCTATCTTTTGGGGTCTCATGACTCTTAGGTACTTCGCGCTTTTCTTCTAAACTTTTATGAAAGTTTACTAGGAGTCTAAGCTCTCGTGACTTTGCTTATAGTTTCTCCAAAAAAAAACTTCGTACCAATAGAGATATATTCCGTACTTATCAATCCATGATCATTTCTTAAATTAGCCAATGTAGGACTCTCTCCCAACAATCCTCCCATCGAACAAAGTATACTATAGAGCCTCCTTTGAGGTTTATGAAGCACTCGAACAACCTCACTTTAATCGAGGTTTAACTCCTTCTCTGGAGTCCTCAAATAAAGTACACCATTTGGTTGACACTTTTGACTATACCTTCGAGACTCAACTTCTTTGTTCGACATTTGAGAATTTTATTGACATGGTTAAGTTAAGGGCATTGTTATGATACCATGTCAGGAATCACGAACCTCTACAATGGTATGATATTGTCCACTTTGAGTATAAGTTTTCTTGTTTTGCTTTTAGTTTCCCCAAAATGCCACATACCAATGGAGATGTATTCCTTACTTATAAACGCATGATTATTTATTTAATTAGCCAATGTGTGACTCCCTACCAACAATCCTCAATAATACTTGTTTCATTATCGTCTTATCGTTGTTCTCACAAATTGTTTTGAAGAAAACTTTACAAAGTGATAACTTATTTTATTTACTAAACAGTACCTTTGGGAACTTGGAGAGCACCACGGAATGGCTGGAAGTTGTGTTCAATATCATTGTTCTCACCAGTGGACTCTTATTAGTCACCATGTTGATAGGAAATATCAAGGTAACCTCTTCAAGTTCGGATGGAAACTCAAAAATGGATCGTTATAATAAATTCCGTAGTATTGTATGTTGAGAATTGTTGAGAGAGGAATTCCATATCGACTAATTAAGGAGTTGATCATGGGTTTATAAGTAGGAATACTATCTCTAATAGTCATAAGAGTTTATGCTCAAAGTAGACAATATTATATCATTGTGGAGATTCGTAATTCTTAACCTTAAATGTGTGCGCAGGTGTTTTTGCATGCAACCACGTCAAAGAAACAAGGAATGCAACTAAAGATGAGGAATCTAGAGTTGTGGATGAGAAAGCGACATCTTCCACAAGGCTTCCGACAGCGTGTTCGGAACTACGAACGGCAACGTTGGGCAGCGATGCGCGGAGTTGACGAGTGCGAGATGATTAAAAACCTACCAGAAGGACTCCGGCGAGAGATAAAGTATCACCTTTGCTTGGATCTAGTTAGGCAGGTGCCATTGTTTCAACACATGGATGATCTTGTTCTTGAGAACATTTGTGACCGTGTCAAGTCCCTCATCTTCACCAAGGGCGAAACCGTAAGTTCTAACAACAAAACCTTTCATTTCCAATGATTATTATTAGATGAAAGTCTCACGTCCCCTAATTTAAAAAATGATCATAGGTTTATAATAAAAAAATACTTTTTCTATTGTTACGAGAGTTTATTCTCAAAGTGGACAAAAAGTCGTGTTGATCTAACCATTATAATTATGCCCAGATAACAAGAGAGGGCGACCCAGTTCAAAGAATGCTGTTTGTCGTTCGAGGGCATCTCCAAAGCAGCCAAGTCTTACGCGACGGCGTCAAAAGCTGCTGCATGTTGGGGCCAGGCAACTTTAGCGGCGACGAGCTTCTATCCTGGTGTCTCCGCCGCCCCTTCATAGAGCGCCTTCCGCCGTCCTCTTGCACTTTGGTGACATTGGAGACGACGGAGGCGTTTGGGTTGGAGGCGGAGGATGTCAAGTACGTAACCCAGCACTTTCGCTACACATTCGTCAACGACAAGGTCAAACGTAGCGCCCGCTACTACTCCCCTGGGTGGCGTACTTGGGCTGCCGTTGCCATCCAGCTTGCCTGGCGTCGTTACCGCCACCGGCTTACGTTAACGTCGTTGTCGTTTATTCGGCCTCGGCGACCCTTGTCGCGGTGCTCTTCCTTGGGGGAGGATCGCCTCCGCCTCTACACGGCGTTGCTTACTTCTCCCAAGCCCAATCAGGATCACTTCGATTTTTGAATCCATGTTGTGCATTTTTCTAATTATCTCGACTTCGAACTTGGAATTGATTGAATTTTCTGTTCTTTGGGTTGGTGGTACAAATTGAAATTATTGCCAGAGAATTTGTCAAGCTGGTTTATTATAATGGTTAGAATCGCAC
mRNA sequence
ATTGGTCAATTAAGACCAAAATTGTCTTTATGGATGAAATCAGTGAAGGGTTTGGCTGTACTTCCCCTCTTGTAATAATTCATCCTTGTCGATTATGCCCTCCACGCCAAACTGACACTCTCACATACAACACCACACAACAACAACAAACAAATCACTACACGTCTCTCCAATCTCCTCCTCCCTCCTCCCATGGCCACCTCCGACGACGACGAAGTAGAAAAAGAATTACAAGAACACGATGGTGGCTTCTGCCGGAGCCTCTACGGAGTCGGCTCGGTTCTCGACCCGAGAGCCAAATGGGTCCGAGAATGGAACCGGGTCTTCCTCCTCGTCTCCGCCGCTGGCCTCTTCGTGGACCCTCTCTTCCTCTACACGCTCTCCATAAGCGAGTCATGGATGTGCTTGTTTGTTGATGGGTGGTTAGCCATCACCGTCACCGTCCTCCGCTGCACCGCCGACGCCTTCCACCTTTGGAACATGTGGCTCCAGCTCAAGACTGCCACAAGATACTCCTTCGCCGGTGGAGCTGGCACCGCAGCCACGCCGGAGAATAGAGGCCTTAGAGATTCCACCCCACGCGCCGTCGCTCTCCGCTACTTCAAATCCAAAAAAGGCTTCTTCTTTGATCTCTTCGTTATTCTTCCACTTCCACAGGTGGTATTATGGGTAGTAATTCCAAGAATAATGAAAGAAGGATCAGTGACATTGGTGATGACAGTTTTGCTAATAGTATTTCTATTTCAATACTTACCCAAATTGTACCACTCGGTATGCCTGCTGCGGCGCCTCCAAAACCTGTCGGGGTTCATCTTTGGCACGGTCTGGTGGGGCATTGCCCTCAATCTCATTGCTTACTTTGTTGCTGCTCACGCTGCAGGCGCATGCTGGTACCTGTTGGGTGTGCAAAGAGCAGCCAAGTGCCTTAAAGAGCAATGCAGAGCCACGAGCAGCTGTGGGGTGAGGCTGTTGTCATGCAAAGATCGTATCTTTTATGGAGCCACCAAGATGGGAATGGGGAGAGACAGTGCAAGATTTGATTGGGCGAATAACAGGCAACCGAAATTCATGTGTTTGGATACTGCTGACAACTTTAATTATGGAGCTTATAAATGGACTGTTCAGCTTGTTGTCAACCAAAGTCGCTTGGAGAAGATCCTTTTTCCTATCTTTTGGGGTCTCATGACTCTTAGTACCTTTGGGAACTTGGAGAGCACCACGGAATGGCTGGAAGTTGTGTTCAATATCATTGTTCTCACCAGTGGACTCTTATTAGTCACCATGTTGATAGGAAATATCAAGGTGTTTTTGCATGCAACCACGTCAAAGAAACAAGGAATGCAACTAAAGATGAGGAATCTAGAGTTGTGGATGAGAAAGCGACATCTTCCACAAGGCTTCCGACAGCGTGTTCGGAACTACGAACGGCAACGTTGGGCAGCGATGCGCGGAGTTGACGAGTGCGAGATGATTAAAAACCTACCAGAAGGACTCCGGCGAGAGATAAAGTATCACCTTTGCTTGGATCTAGTTAGGCAGGTGCCATTGTTTCAACACATGGATGATCTTGTTCTTGAGAACATTTGTGACCGTGTCAAGTCCCTCATCTTCACCAAGGGCGAAACCATAACAAGAGAGGGCGACCCAGTTCAAAGAATGCTGTTTGTCGTTCGAGGGCATCTCCAAAGCAGCCAAGTCTTACGCGACGGCGTCAAAAGCTGCTGCATGTTGGGGCCAGGCAACTTTAGCGGCGACGAGCTTCTATCCTGGTGTCTCCGCCGCCCCTTCATAGAGCGCCTTCCGCCGTCCTCTTGCACTTTGGTGACATTGGAGACGACGGAGGCGTTTGGGTTGGAGGCGGAGGATGTCAAGTACGTAACCCAGCACTTTCGCTACACATTCGTCAACGACAAGGTCAAACGTAGCGCCCGCTACTACTCCCCTGGGTGGCGTACTTGGGCTGCCGTTGCCATCCAGCTTGCCTGGCGTCGTTACCGCCACCGGCTTACGTTAACGTCGTTGTCGTTTATTCGGCCTCGGCGACCCTTGTCGCGGTGCTCTTCCTTGGGGGAGGATCGCCTCCGCCTCTACACGGCGTTGCTTACTTCTCCCAAGCCCAATCAGGATCACTTCGATTTTTGAATCCATGTTGTGCATTTTTCTAATTATCTCGACTTCGAACTTGGAATTGATTGAATTTTCTGTTCTTTGGGTTGGTGGTACAAATTGAAATTATTGCCAGAGAATTTGTCAAGCTGGTTTATTATAATGGTTAGAATCGCAC
Coding sequence (CDS)
ATGGCCACCTCCGACGACGACGAAGTAGAAAAAGAATTACAAGAACACGATGGTGGCTTCTGCCGGAGCCTCTACGGAGTCGGCTCGGTTCTCGACCCGAGAGCCAAATGGGTCCGAGAATGGAACCGGGTCTTCCTCCTCGTCTCCGCCGCTGGCCTCTTCGTGGACCCTCTCTTCCTCTACACGCTCTCCATAAGCGAGTCATGGATGTGCTTGTTTGTTGATGGGTGGTTAGCCATCACCGTCACCGTCCTCCGCTGCACCGCCGACGCCTTCCACCTTTGGAACATGTGGCTCCAGCTCAAGACTGCCACAAGATACTCCTTCGCCGGTGGAGCTGGCACCGCAGCCACGCCGGAGAATAGAGGCCTTAGAGATTCCACCCCACGCGCCGTCGCTCTCCGCTACTTCAAATCCAAAAAAGGCTTCTTCTTTGATCTCTTCGTTATTCTTCCACTTCCACAGGTGGTATTATGGGTAGTAATTCCAAGAATAATGAAAGAAGGATCAGTGACATTGGTGATGACAGTTTTGCTAATAGTATTTCTATTTCAATACTTACCCAAATTGTACCACTCGGTATGCCTGCTGCGGCGCCTCCAAAACCTGTCGGGGTTCATCTTTGGCACGGTCTGGTGGGGCATTGCCCTCAATCTCATTGCTTACTTTGTTGCTGCTCACGCTGCAGGCGCATGCTGGTACCTGTTGGGTGTGCAAAGAGCAGCCAAGTGCCTTAAAGAGCAATGCAGAGCCACGAGCAGCTGTGGGGTGAGGCTGTTGTCATGCAAAGATCGTATCTTTTATGGAGCCACCAAGATGGGAATGGGGAGAGACAGTGCAAGATTTGATTGGGCGAATAACAGGCAACCGAAATTCATGTGTTTGGATACTGCTGACAACTTTAATTATGGAGCTTATAAATGGACTGTTCAGCTTGTTGTCAACCAAAGTCGCTTGGAGAAGATCCTTTTTCCTATCTTTTGGGGTCTCATGACTCTTAGTACCTTTGGGAACTTGGAGAGCACCACGGAATGGCTGGAAGTTGTGTTCAATATCATTGTTCTCACCAGTGGACTCTTATTAGTCACCATGTTGATAGGAAATATCAAGGTGTTTTTGCATGCAACCACGTCAAAGAAACAAGGAATGCAACTAAAGATGAGGAATCTAGAGTTGTGGATGAGAAAGCGACATCTTCCACAAGGCTTCCGACAGCGTGTTCGGAACTACGAACGGCAACGTTGGGCAGCGATGCGCGGAGTTGACGAGTGCGAGATGATTAAAAACCTACCAGAAGGACTCCGGCGAGAGATAAAGTATCACCTTTGCTTGGATCTAGTTAGGCAGGTGCCATTGTTTCAACACATGGATGATCTTGTTCTTGAGAACATTTGTGACCGTGTCAAGTCCCTCATCTTCACCAAGGGCGAAACCATAACAAGAGAGGGCGACCCAGTTCAAAGAATGCTGTTTGTCGTTCGAGGGCATCTCCAAAGCAGCCAAGTCTTACGCGACGGCGTCAAAAGCTGCTGCATGTTGGGGCCAGGCAACTTTAGCGGCGACGAGCTTCTATCCTGGTGTCTCCGCCGCCCCTTCATAGAGCGCCTTCCGCCGTCCTCTTGCACTTTGGTGACATTGGAGACGACGGAGGCGTTTGGGTTGGAGGCGGAGGATGTCAAGTACGTAACCCAGCACTTTCGCTACACATTCGTCAACGACAAGGTCAAACGTAGCGCCCGCTACTACTCCCCTGGGTGGCGTACTTGGGCTGCCGTTGCCATCCAGCTTGCCTGGCGTCGTTACCGCCACCGGCTTACGTTAACGTCGTTGTCGTTTATTCGGCCTCGGCGACCCTTGTCGCGGTGCTCTTCCTTGGGGGAGGATCGCCTCCGCCTCTACACGGCGTTGCTTACTTCTCCCAAGCCCAATCAGGATCACTTCGATTTTTGA
Protein sequence
MATSDDDEVEKELQEHDGGFCRSLYGVGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLRCTADAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFDLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGFIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRIFYGATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLKMRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQDHFDF
Homology
BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot
Match:
Q94AS9 (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana OX=3702 GN=CNGC4 PE=2 SV=2)
HSP 1 Score: 1007.7 bits (2604), Expect = 6.1e-293
Identity = 495/622 (79.58%), Postives = 546/622 (87.78%), Query Frame = 0
Query: 27 VGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLR 86
+G +LDPR+KWVREWN+VFLLV A GLFVDPLFLYTLS+S++ MCL VDGWLA+TVT LR
Sbjct: 76 LGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMCLLVDGWLALTVTALR 135
Query: 87 CTADAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFD 146
D HLWN+W+Q K A R+ + GG T + G R ST VA Y K K GFFFD
Sbjct: 136 SMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGST--RVAPPYVK-KNGFFFD 195
Query: 147 LFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGF 206
LFVILPLPQVVLWVVIP ++K GSVTLV++VLL+ FLFQYLPK+YHS+ LRR LSG+
Sbjct: 196 LFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGY 255
Query: 207 IFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRI 266
IFGTVWWGIALN+IAYFVAAHAAGACWYLLGVQR+AKCLKEQC T C +R+LSCK+ +
Sbjct: 256 IFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPV 315
Query: 267 FYGATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPI 326
+YG T M + D AR WA N Q + +CLD N+ YGAY+WT+QLV ++SRLEKILFPI
Sbjct: 316 YYGTTVMVL--DRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKILFPI 375
Query: 327 FWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLK 386
FWGLMTLSTFGNLESTTEW EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ M LK
Sbjct: 376 FWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLK 435
Query: 387 MRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDL 446
MRN+E WM+KRHLP GFRQRVRNYERQRWAAMRGVDECEM++NLPEGLRR+IKYHLCLDL
Sbjct: 436 MRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDL 495
Query: 447 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDG 506
VRQVPLFQHMDDLVLENICDRVKSLIFTKGETI +EGD VQRMLFVVRGHLQSSQ+LRDG
Sbjct: 496 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDG 555
Query: 507 VKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHF 566
VKSCCMLGPGNFSGDELLSWCLRRPF+ERLPPSS TLVTLETTEAFGL+AEDVKYVTQHF
Sbjct: 556 VKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHF 615
Query: 567 RYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLG 626
RYTFVN+KVKRSARYYSPGWRTWAAVA+QLAWRRY+HRLTLTSLSFIRPRRPLSRC+SLG
Sbjct: 616 RYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLG 675
Query: 627 EDRLRLYTALLTSPKPNQDHFD 649
ED+LRLY A+LTSPKPN D FD
Sbjct: 676 EDKLRLYAAILTSPKPNPDDFD 692
BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot
Match:
O65718 (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana OX=3702 GN=CNGC2 PE=1 SV=1)
HSP 1 Score: 639.8 bits (1649), Expect = 3.3e-182
Identity = 327/632 (51.74%), Postives = 435/632 (68.83%), Query Frame = 0
Query: 28 GSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESW--MCLFVDGWLAITVTVL 87
G VLDPR+K V+ WNR LL L VDPLF Y LSI + CL++DG A VTVL
Sbjct: 111 GEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVL 170
Query: 88 RCTADAFHLWNMWLQLKTA--TRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGF 147
R DA HLW++WLQ + A +R S G G PRA+A Y +S GF
Sbjct: 171 RTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVW---------DPRAIASHYARSLTGF 230
Query: 148 FFDLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNL 207
+FD+ VILP+PQ V W+V+P++++E V L+MT+LL++FLFQ+LPK+YH +CL+RR+Q +
Sbjct: 231 WFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKV 290
Query: 208 SGFIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCK 267
+G+IFGT+WWG ALNLIAYF+A+H AG CWY+L +QR A C+++QC T +C + L+CK
Sbjct: 291 TGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCNLS-LACK 350
Query: 268 DRIFY----GATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRL 327
+ + Y + +G S N K MCLD+ F YG Y+W + ++ + S
Sbjct: 351 EEVCYQFVSPTSTVGYPCLSGNLTSVVN---KPMCLDSNGPFRYGIYRWALPVISSNSLA 410
Query: 328 EKILFPIFWGLMTLSTFGN-LESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTS 387
KIL+PIFWGLMTLSTF N LE T+ WLEV+F+I+++ SGLLL T+LIGNI+VFLHA +
Sbjct: 411 VKILYPIFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMA 470
Query: 388 KKQGMQLKMRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREI 447
KK+ MQ++ R++E WM++R LP RQRVR +ERQRW A+ G DE E+I +LP GLRR+I
Sbjct: 471 KKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDI 530
Query: 448 KYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQ 507
K +LC DL+ +VPLF+ MDDL+L+NICDR K +F+K E I REGDPVQRM+F++RG ++
Sbjct: 531 KRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVK 590
Query: 508 SSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAED 567
Q L GV + L PG + GDELLSWCLRRPF++RLPPSS T V LE EAF L +ED
Sbjct: 591 RIQSLSKGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSED 650
Query: 568 VKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRP 627
++Y+T HFRY F N+++KR+ARYYS WRTWAAV IQ+AWRR R R ++ P
Sbjct: 651 LRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENIG--GSMSP 710
Query: 628 LSRCSSLG--EDRLRLYTALLTSPKPNQDHFD 649
+S S G E RL Y A+ S +P+ DH +
Sbjct: 711 VSENSIEGNSERRLLQYAAMFMSIRPH-DHLE 726
BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot
Match:
Q9SL29 (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana OX=3702 GN=CNGC15 PE=3 SV=1)
HSP 1 Score: 376.7 bits (966), Expect = 5.3e-103
Identity = 216/586 (36.86%), Postives = 336/586 (57.34%), Query Frame = 0
Query: 30 VLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLRCTA 89
+LDPR + +R WN++FL+ LFVDPLF + L + + C+ + L + +T++R A
Sbjct: 68 ILDPRGQTIRRWNKIFLIACLVSLFVDPLFFF-LPVMRNEACITIGVRLEVVLTLIRSLA 127
Query: 90 DAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFDLFV 149
DAF++ + ++ +TA + RG R +A RY K F+ L
Sbjct: 128 DAFYIAQILIRFRTAY-------IAPPSRVFGRGELVIDSRKIAWRYL--HKSFWIHLVA 187
Query: 150 ILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGFIFG 209
LPLPQV++W++IP ++ +T VL + +FQY+P+++ L R++ +G +
Sbjct: 188 ALPLPQVLIWIIIPN-LRGSPMTNTKNVLRFIIIFQYVPRMFLIFPLSRQIIKATGVVTE 247
Query: 210 TVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSS-CGVRLLSCKDRIFY 269
T W G A NL+ Y +A+H GACWYLL V+R C + C C R C+
Sbjct: 248 TAWAGAAYNLMLYMLASHVLGACWYLLAVERQEACWRHACNIEKQICQYRFFECR----- 307
Query: 270 GATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSR-LEKILFPIF 329
++ + ++ F+W+N +C + + +G + V V S+ + K + ++
Sbjct: 308 ---RLEDPQRNSWFEWSNITT---ICKPASKFYEFGIFGDAVTSTVTSSKFINKYFYCLW 367
Query: 330 WGLMTLSTFG-NLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLK 389
WGL LS+ G NL ++T E++F II+ T GL+L +LIGN++ +L +TT + + +++
Sbjct: 368 WGLKNLSSLGQNLATSTYAGEILFAIIIATLGLVLFALLIGNMQTYLQSTTMRLEEWRIR 427
Query: 390 MRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDL 449
+ E WM R LP RQ VR Y++ +W A RGVDE ++ +LP LRR+IK HLC DL
Sbjct: 428 RTDTEQWMHHRQLPPELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDL 487
Query: 450 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQS--SQVLR 509
VR+VPLF MD+ +L+ IC+R+K + T+G + REGDPV MLF++RGHL S + R
Sbjct: 488 VRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGR 547
Query: 510 DGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQ 569
G + C++GPG+F G+ELL+W L + LP S+ T+ + EAF L+AED+++V
Sbjct: 548 TGFFNSCLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQFVAS 607
Query: 570 HFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSL 611
FR +++ R+YS WRTWAA IQ AWRR+R R T L
Sbjct: 608 QFRRLHTK-QLRHKFRFYSHQWRTWAACFIQAAWRRHRKRKYKTEL 630
BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot
Match:
Q9SJA4 (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana OX=3702 GN=CNGC14 PE=2 SV=2)
HSP 1 Score: 369.0 bits (946), Expect = 1.1e-100
Identity = 236/592 (39.86%), Postives = 336/592 (56.76%), Query Frame = 0
Query: 30 VLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISE--SWMCLFVDGWLAITVTVLRC 89
+LDP V +WNRVFL L+VDPLF + S+ C+ D L I +T R
Sbjct: 72 ILDPGGDAVLQWNRVFLFWCLVALYVDPLFFFLSSVKRIGRSSCMTTDLKLGIVITFFRT 131
Query: 90 TADAFHLWNMWLQLKTA--TRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFF 149
AD F++ ++ ++ +TA +R S G RG P+ +A RY +S F
Sbjct: 132 LADLFYVLHIVIKFRTAYVSRTSRVFG---------RGELVKDPKLIARRYLRS--DFIV 191
Query: 150 DLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSG 209
DL LPLPQ+V W ++P I S ++LIV L QY+P+LY L + +G
Sbjct: 192 DLIACLPLPQIVSWFILPSIRSSHSDHTTNALVLIV-LVQYIPRLYLIFPLSAEIIKATG 251
Query: 210 FIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDR 269
+ T W G A NL+ Y +A+H G+ WYLL ++R A C K +C S L C
Sbjct: 252 VVTTTAWAGAAYNLLQYMLASHILGSAWYLLSIERQATCWKAECHKESV----PLQCVTD 311
Query: 270 IFYGATKMGMGRDSARFDWANNRQPKFMCLDTADN--FNYGAYKWTV-QLVVNQSRLEKI 329
F T + RD R +W N C D ++N F +G + + + VV+ LEK
Sbjct: 312 FFDCGT---LHRDD-RNNWQNTTVVFSNC-DPSNNIQFTFGIFADALTKNVVSSPFLEKY 371
Query: 330 LFPIFWGLMTLSTFG-NLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ 389
L+ +++GL LS++G NL ++T LE +F I+V GL+L +LIGN++ +L + T + +
Sbjct: 372 LYCLWFGLQNLSSYGQNLSTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLE 431
Query: 390 GMQLKMRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYH 449
+LK R+ E WM R LPQ R+RVR + + +W A RGVDE ++ +LP LRR+I+ H
Sbjct: 432 EWRLKRRDTEEWMGHRLLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRH 491
Query: 450 LCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQ 509
LCLDLVR+VPLF MDD +L+ IC+R+ S + T+G I REGDPV MLF++RG L+SS
Sbjct: 492 LCLDLVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIRGKLESST 551
Query: 510 VL--RDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDV 569
R G + L PG+F G+ELL+W L LP S+ T+ LE EAF L+A D+
Sbjct: 552 TNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTVNLPSSTRTVRALEEVEAFALQAGDL 611
Query: 570 KYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLS 612
K+V FR + K++ + RYYS WRTWAA +Q+AWRRY+ + SLS
Sbjct: 612 KFVANQFR-RLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKSLS 641
BLAST of CmaCh16G008100 vs. ExPASy Swiss-Prot
Match:
A0A072VMJ3 (Protein CNGC15c OS=Medicago truncatula OX=3880 GN=CNGC15C PE=1 SV=1)
HSP 1 Score: 368.6 bits (945), Expect = 1.4e-100
Identity = 218/580 (37.59%), Postives = 326/580 (56.21%), Query Frame = 0
Query: 30 VLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLRCTA 89
VLDPR + + WN++FL+ LFVDPLF Y L + +C+ + L + +TV+R
Sbjct: 77 VLDPRGQLIHRWNKIFLVACLVSLFVDPLFFY-LPVVREEVCIDIGKTLEVILTVVRSFG 136
Query: 90 DAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFDLFV 149
D F++ + ++ +TA ++ RG T +ALRYF KGF+ D
Sbjct: 137 DLFYIVQICMKFRTAY-------VAPSSKVFGRGELVLTYSKIALRYF--SKGFWLDFIA 196
Query: 150 ILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGFIFG 209
LPLPQV++W++IP ++ ++ VL +FQY+P+LY L ++ +G +
Sbjct: 197 ALPLPQVLIWIIIP-TLRGSTMANTKNVLRFFIIFQYIPRLYLIFPLSSQIVKATGVVTE 256
Query: 210 TVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRIFYG 269
T W G A NL+ Y +A+H GACWYLL ++R C K C S +C+ YG
Sbjct: 257 TAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWKSVCNMEKS------NCQ----YG 316
Query: 270 ATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSR-LEKILFPIFW 329
+D+ R W +C A + +G Y + V S K + ++W
Sbjct: 317 FFNCHSIKDAPRVAWFIASNVTNLCSPNAGFYPFGIYADAMTSKVTSSPFFNKYFYCLWW 376
Query: 330 GLMTLSTFGNLESTTEWL-EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLKM 389
GL LS+ G T+ ++ E++ I+V T GL+L +LIGN++ +L + T + + ++K
Sbjct: 377 GLRNLSSLGQGLLTSTFIGEIMVAIVVATLGLVLFALLIGNMQTYLQSITVRLEEWRVKR 436
Query: 390 RNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDLV 449
+ E WM R LP R+ +R Y + +W A RGV+E +++K LP LRREIK HLCL+LV
Sbjct: 437 TDTEQWMHHRQLPPELRESIRKYNQYKWVATRGVEEEDLLKGLPLDLRREIKRHLCLELV 496
Query: 450 RQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQS--SQVLRD 509
R VPLF MD+ +L+ IC+R+K + T+G + REGDPV MLF++RGHL S + RD
Sbjct: 497 RGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRD 556
Query: 510 GVKSCCMLGPGNFSGDELLSWCL-RRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQ 569
G + C +GPG+F G+ELL+W L RP + LP S+ T+ EAF L AED+K+V
Sbjct: 557 GFFNSCRIGPGDFCGEELLTWALDPRPSV-ILPSSTRTVKAFSEVEAFALIAEDLKFVAS 616
Query: 570 HFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHR 605
FR + +++ R+YS WRTWAA IQ AWRR++ R
Sbjct: 617 QFR-RLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKR 633
BLAST of CmaCh16G008100 vs. TAIR 10
Match:
AT5G54250.1 (cyclic nucleotide-gated cation channel 4 )
HSP 1 Score: 1007.7 bits (2604), Expect = 4.3e-294
Identity = 495/622 (79.58%), Postives = 546/622 (87.78%), Query Frame = 0
Query: 27 VGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLR 86
+G +LDPR+KWVREWN+VFLLV A GLFVDPLFLYTLS+S++ MCL VDGWLA+TVT LR
Sbjct: 76 LGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMCLLVDGWLALTVTALR 135
Query: 87 CTADAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFD 146
D HLWN+W+Q K A R+ + GG T + G R ST VA Y K K GFFFD
Sbjct: 136 SMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGST--RVAPPYVK-KNGFFFD 195
Query: 147 LFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGF 206
LFVILPLPQVVLWVVIP ++K GSVTLV++VLL+ FLFQYLPK+YHS+ LRR LSG+
Sbjct: 196 LFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGY 255
Query: 207 IFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRI 266
IFGTVWWGIALN+IAYFVAAHAAGACWYLLGVQR+AKCLKEQC T C +R+LSCK+ +
Sbjct: 256 IFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPV 315
Query: 267 FYGATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPI 326
+YG T M + D AR WA N Q + +CLD N+ YGAY+WT+QLV ++SRLEKILFPI
Sbjct: 316 YYGTTVMVL--DRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKILFPI 375
Query: 327 FWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLK 386
FWGLMTLSTFGNLESTTEW EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ M LK
Sbjct: 376 FWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLK 435
Query: 387 MRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDL 446
MRN+E WM+KRHLP GFRQRVRNYERQRWAAMRGVDECEM++NLPEGLRR+IKYHLCLDL
Sbjct: 436 MRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDL 495
Query: 447 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDG 506
VRQVPLFQHMDDLVLENICDRVKSLIFTKGETI +EGD VQRMLFVVRGHLQSSQ+LRDG
Sbjct: 496 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDG 555
Query: 507 VKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHF 566
VKSCCMLGPGNFSGDELLSWCLRRPF+ERLPPSS TLVTLETTEAFGL+AEDVKYVTQHF
Sbjct: 556 VKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHF 615
Query: 567 RYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLG 626
RYTFVN+KVKRSARYYSPGWRTWAAVA+QLAWRRY+HRLTLTSLSFIRPRRPLSRC+SLG
Sbjct: 616 RYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLG 675
Query: 627 EDRLRLYTALLTSPKPNQDHFD 649
ED+LRLY A+LTSPKPN D FD
Sbjct: 676 EDKLRLYAAILTSPKPNPDDFD 692
BLAST of CmaCh16G008100 vs. TAIR 10
Match:
AT5G54250.2 (cyclic nucleotide-gated cation channel 4 )
HSP 1 Score: 1007.7 bits (2604), Expect = 4.3e-294
Identity = 495/622 (79.58%), Postives = 546/622 (87.78%), Query Frame = 0
Query: 27 VGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLR 86
+G +LDPR+KWVREWN+VFLLV A GLFVDPLFLYTLS+S++ MCL VDGWLA+TVT LR
Sbjct: 76 LGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMCLLVDGWLALTVTALR 135
Query: 87 CTADAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFD 146
D HLWN+W+Q K A R+ + GG T + G R ST VA Y K K GFFFD
Sbjct: 136 SMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGST--RVAPPYVK-KNGFFFD 195
Query: 147 LFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGF 206
LFVILPLPQVVLWVVIP ++K GSVTLV++VLL+ FLFQYLPK+YHS+ LRR LSG+
Sbjct: 196 LFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGY 255
Query: 207 IFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRI 266
IFGTVWWGIALN+IAYFVAAHAAGACWYLLGVQR+AKCLKEQC T C +R+LSCK+ +
Sbjct: 256 IFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPV 315
Query: 267 FYGATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPI 326
+YG T M + D AR WA N Q + +CLD N+ YGAY+WT+QLV ++SRLEKILFPI
Sbjct: 316 YYGTTVMVL--DRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKILFPI 375
Query: 327 FWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLK 386
FWGLMTLSTFGNLESTTEW EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ M LK
Sbjct: 376 FWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLK 435
Query: 387 MRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDL 446
MRN+E WM+KRHLP GFRQRVRNYERQRWAAMRGVDECEM++NLPEGLRR+IKYHLCLDL
Sbjct: 436 MRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDL 495
Query: 447 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDG 506
VRQVPLFQHMDDLVLENICDRVKSLIFTKGETI +EGD VQRMLFVVRGHLQSSQ+LRDG
Sbjct: 496 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDG 555
Query: 507 VKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHF 566
VKSCCMLGPGNFSGDELLSWCLRRPF+ERLPPSS TLVTLETTEAFGL+AEDVKYVTQHF
Sbjct: 556 VKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHF 615
Query: 567 RYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLG 626
RYTFVN+KVKRSARYYSPGWRTWAAVA+QLAWRRY+HRLTLTSLSFIRPRRPLSRC+SLG
Sbjct: 616 RYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLG 675
Query: 627 EDRLRLYTALLTSPKPNQDHFD 649
ED+LRLY A+LTSPKPN D FD
Sbjct: 676 EDKLRLYAAILTSPKPNPDDFD 692
BLAST of CmaCh16G008100 vs. TAIR 10
Match:
AT5G54250.3 (cyclic nucleotide-gated cation channel 4 )
HSP 1 Score: 991.9 bits (2563), Expect = 2.4e-289
Identity = 490/622 (78.78%), Postives = 541/622 (86.98%), Query Frame = 0
Query: 27 VGSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESWMCLFVDGWLAITVTVLR 86
+G +LDPR+KWVREWN+VFLLV A GLFVDPLFLYTLS+S++ MCL VDGWLA+TVT LR
Sbjct: 76 LGRILDPRSKWVREWNKVFLLVCATGLFVDPLFLYTLSVSDTCMCLLVDGWLALTVTALR 135
Query: 87 CTADAFHLWNMWLQLKTATRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGFFFD 146
D HLWN+W+Q K A R+ + GG T + G R ST VA Y K K GFFFD
Sbjct: 136 SMTDLLHLWNIWIQFKIARRWPYPGGDSDGDTNKGGGTRGST--RVAPPYVK-KNGFFFD 195
Query: 147 LFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNLSGF 206
LFVILPLPQVVLWVVIP ++K GSVTLV++VLL+ FLFQYLPK+YHS+ LRR LSG+
Sbjct: 196 LFVILPLPQVVLWVVIPSLLKRGSVTLVVSVLLVTFLFQYLPKIYHSIRHLRRNATLSGY 255
Query: 207 IFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCKDRI 266
IFGTVWWGIALN+IAYFVAAHAAGACWYLLGVQR+AKCLKEQC T C +R+LSCK+ +
Sbjct: 256 IFGTVWWGIALNMIAYFVAAHAAGACWYLLGVQRSAKCLKEQCENTIGCDLRMLSCKEPV 315
Query: 267 FYGATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRLEKILFPI 326
+YG T M + D AR WA N Q + +CLD N+ YGAY+WT+QLV ++SRLEKILFPI
Sbjct: 316 YYGTTVMVL--DRARLAWAQNHQARSVCLDINTNYTYGAYQWTIQLVSSESRLEKILFPI 375
Query: 327 FWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQGMQLK 386
FWGLMTLSTFGNLESTTEW EVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQ M LK
Sbjct: 376 FWGLMTLSTFGNLESTTEWSEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMHLK 435
Query: 387 MRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREIKYHLCLDL 446
MRN+E WM+KRHLP GFRQRVRNYERQRWAAMRGVDECEM++NLPEGLRR+IKYHLCLDL
Sbjct: 436 MRNIEWWMKKRHLPIGFRQRVRNYERQRWAAMRGVDECEMVQNLPEGLRRDIKYHLCLDL 495
Query: 447 VRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDG 506
VR QHMDDLVLENICDRVKSLIFTKGETI +EGD VQRMLFVVRGHLQSSQ+LRDG
Sbjct: 496 VR-----QHMDDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDG 555
Query: 507 VKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHF 566
VKSCCMLGPGNFSGDELLSWCLRRPF+ERLPPSS TLVTLETTEAFGL+AEDVKYVTQHF
Sbjct: 556 VKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHF 615
Query: 567 RYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPLSRCSSLG 626
RYTFVN+KVKRSARYYSPGWRTWAAVA+QLAWRRY+HRLTLTSLSFIRPRRPLSRC+SLG
Sbjct: 616 RYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLG 675
Query: 627 EDRLRLYTALLTSPKPNQDHFD 649
ED+LRLY A+LTSPKPN D FD
Sbjct: 676 EDKLRLYAAILTSPKPNPDDFD 687
BLAST of CmaCh16G008100 vs. TAIR 10
Match:
AT5G15410.2 (Cyclic nucleotide-regulated ion channel family protein )
HSP 1 Score: 639.8 bits (1649), Expect = 2.4e-183
Identity = 327/632 (51.74%), Postives = 435/632 (68.83%), Query Frame = 0
Query: 28 GSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESW--MCLFVDGWLAITVTVL 87
G VLDPR+K V+ WNR LL L VDPLF Y LSI + CL++DG A VTVL
Sbjct: 110 GEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVL 169
Query: 88 RCTADAFHLWNMWLQLKTA--TRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGF 147
R DA HLW++WLQ + A +R S G G PRA+A Y +S GF
Sbjct: 170 RTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVW---------DPRAIASHYARSLTGF 229
Query: 148 FFDLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNL 207
+FD+ VILP+PQ V W+V+P++++E V L+MT+LL++FLFQ+LPK+YH +CL+RR+Q +
Sbjct: 230 WFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKV 289
Query: 208 SGFIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCK 267
+G+IFGT+WWG ALNLIAYF+A+H AG CWY+L +QR A C+++QC T +C + L+CK
Sbjct: 290 TGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCNLS-LACK 349
Query: 268 DRIFY----GATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRL 327
+ + Y + +G S N K MCLD+ F YG Y+W + ++ + S
Sbjct: 350 EEVCYQFVSPTSTVGYPCLSGNLTSVVN---KPMCLDSNGPFRYGIYRWALPVISSNSLA 409
Query: 328 EKILFPIFWGLMTLSTFGN-LESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTS 387
KIL+PIFWGLMTLSTF N LE T+ WLEV+F+I+++ SGLLL T+LIGNI+VFLHA +
Sbjct: 410 VKILYPIFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMA 469
Query: 388 KKQGMQLKMRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREI 447
KK+ MQ++ R++E WM++R LP RQRVR +ERQRW A+ G DE E+I +LP GLRR+I
Sbjct: 470 KKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDI 529
Query: 448 KYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQ 507
K +LC DL+ +VPLF+ MDDL+L+NICDR K +F+K E I REGDPVQRM+F++RG ++
Sbjct: 530 KRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVK 589
Query: 508 SSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAED 567
Q L GV + L PG + GDELLSWCLRRPF++RLPPSS T V LE EAF L +ED
Sbjct: 590 RIQSLSKGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSED 649
Query: 568 VKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRP 627
++Y+T HFRY F N+++KR+ARYYS WRTWAAV IQ+AWRR R R ++ P
Sbjct: 650 LRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENIG--GSMSP 709
Query: 628 LSRCSSLG--EDRLRLYTALLTSPKPNQDHFD 649
+S S G E RL Y A+ S +P+ DH +
Sbjct: 710 VSENSIEGNSERRLLQYAAMFMSIRPH-DHLE 725
BLAST of CmaCh16G008100 vs. TAIR 10
Match:
AT5G15410.1 (Cyclic nucleotide-regulated ion channel family protein )
HSP 1 Score: 639.8 bits (1649), Expect = 2.4e-183
Identity = 327/632 (51.74%), Postives = 435/632 (68.83%), Query Frame = 0
Query: 28 GSVLDPRAKWVREWNRVFLLVSAAGLFVDPLFLYTLSISESW--MCLFVDGWLAITVTVL 87
G VLDPR+K V+ WNR LL L VDPLF Y LSI + CL++DG A VTVL
Sbjct: 111 GEVLDPRSKRVQRWNRALLLARGMALAVDPLFFYALSIGRTTGPACLYMDGAFAAVVTVL 170
Query: 88 RCTADAFHLWNMWLQLKTA--TRYSFAGGAGTAATPENRGLRDSTPRAVALRYFKSKKGF 147
R DA HLW++WLQ + A +R S G G PRA+A Y +S GF
Sbjct: 171 RTCLDAVHLWHVWLQFRLAYVSRESLVVGCGKLVW---------DPRAIASHYARSLTGF 230
Query: 148 FFDLFVILPLPQVVLWVVIPRIMKEGSVTLVMTVLLIVFLFQYLPKLYHSVCLLRRLQNL 207
+FD+ VILP+PQ V W+V+P++++E V L+MT+LL++FLFQ+LPK+YH +CL+RR+Q +
Sbjct: 231 WFDVIVILPVPQAVFWLVVPKLIREEKVKLIMTILLLIFLFQFLPKIYHCICLMRRMQKV 290
Query: 208 SGFIFGTVWWGIALNLIAYFVAAHAAGACWYLLGVQRAAKCLKEQCRATSSCGVRLLSCK 267
+G+IFGT+WWG ALNLIAYF+A+H AG CWY+L +QR A C+++QC T +C + L+CK
Sbjct: 291 TGYIFGTIWWGFALNLIAYFIASHVAGGCWYVLAIQRVASCIRQQCMRTGNCNLS-LACK 350
Query: 268 DRIFY----GATKMGMGRDSARFDWANNRQPKFMCLDTADNFNYGAYKWTVQLVVNQSRL 327
+ + Y + +G S N K MCLD+ F YG Y+W + ++ + S
Sbjct: 351 EEVCYQFVSPTSTVGYPCLSGNLTSVVN---KPMCLDSNGPFRYGIYRWALPVISSNSLA 410
Query: 328 EKILFPIFWGLMTLSTFGN-LESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTS 387
KIL+PIFWGLMTLSTF N LE T+ WLEV+F+I+++ SGLLL T+LIGNI+VFLHA +
Sbjct: 411 VKILYPIFWGLMTLSTFANDLEPTSNWLEVIFSIVMVLSGLLLFTLLIGNIQVFLHAVMA 470
Query: 388 KKQGMQLKMRNLELWMRKRHLPQGFRQRVRNYERQRWAAMRGVDECEMIKNLPEGLRREI 447
KK+ MQ++ R++E WM++R LP RQRVR +ERQRW A+ G DE E+I +LP GLRR+I
Sbjct: 471 KKRKMQIRCRDMEWWMKRRQLPSRLRQRVRRFERQRWNALGGEDELELIHDLPPGLRRDI 530
Query: 448 KYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQ 507
K +LC DL+ +VPLF+ MDDL+L+NICDR K +F+K E I REGDPVQRM+F++RG ++
Sbjct: 531 KRYLCFDLINKVPLFRGMDDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVK 590
Query: 508 SSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAED 567
Q L GV + L PG + GDELLSWCLRRPF++RLPPSS T V LE EAF L +ED
Sbjct: 591 RIQSLSKGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSED 650
Query: 568 VKYVTQHFRYTFVNDKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRP 627
++Y+T HFRY F N+++KR+ARYYS WRTWAAV IQ+AWRR R R ++ P
Sbjct: 651 LRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENIG--GSMSP 710
Query: 628 LSRCSSLG--EDRLRLYTALLTSPKPNQDHFD 649
+S S G E RL Y A+ S +P+ DH +
Sbjct: 711 VSENSIEGNSERRLLQYAAMFMSIRPH-DHLE 726
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q94AS9 | 6.1e-293 | 79.58 | Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana OX=3702 GN=CNGC4 P... | [more] |
O65718 | 3.3e-182 | 51.74 | Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana OX=3702 GN=CNGC2 P... | [more] |
Q9SL29 | 5.3e-103 | 36.86 | Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Q9SJA4 | 1.1e-100 | 39.86 | Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana OX=3702 ... | [more] |
A0A072VMJ3 | 1.4e-100 | 37.59 | Protein CNGC15c OS=Medicago truncatula OX=3880 GN=CNGC15C PE=1 SV=1 | [more] |