CmaCh16G006430 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh16G006430
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein FMP32, mitochondrial-like isoform X1
LocationCma_Chr16: 3344079 .. 3346745 (+)
RNA-Seq ExpressionCmaCh16G006430
SyntenyCmaCh16G006430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCTGCAGAGTCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGGCAATCGTTAGCCAATTCAGGTTTTCAAAGGTTTGGAGTCCCGAAGGCGTCTTCGTTTGAAAGCGCAATTTCCGACCATTCTGCAAATAGTTCATCGGCGGCATCCATCTCCTTGATTTCTCGGTATAGGCAGATCTCTCAGCTTGCGAAATCTAACGGGAAGCGATTGTTTCTAGTCGACACTTTAGCCCTAGTAATTTCGCTCTCTTTATTCTTTGCCTTTTCTCGGTTTTGTAACATTGTTCTTCGATTTTTATCAATCGCTTGCATTATAATCCACCATGGGGGTGGAATGAGGAAGTTAAGAATTTATGCACTCTCATGAGGGCTGCTTGAAAGTGATATGATTCCTTTTCTTTCAGGTTAGGAAATTGGAGGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCAATAACAGCTGCCATTACTGAAGTGTTGAATGATAGCTTGGAAAATATATCTCATTCATTTGTTTCAAAGGGAGAGATGCAGAAAGTGAGTTTTTAAGTACTTTACTTTTACATGTTTTCTATTCAGCTAATGTCGGTGTAGTTCAATGATGACGAAAAGCTAAAGTTTTTGGTGGTACGAGCGTGTATAACATCTATCATTTTACCTTCTTTTGTATTGTTTGCGTCCTACTGTCCTTTAAATGGATATCTTTACTATATGTTTGTAGGTTGAAATGATCCAGGATTCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGTACCAAATTTGTAGACTTGCCCTATCCTAGTTTACTTTCTTGGTCTGGTTAGATGATGGTATCTATGTATAATACTCCCTAATTTGTTTGGTTTAGCAACAAACTAAAGAGGGAAACCTTAAATAAAAATGAGTATTTAGTTTCCATTGGAGTCCTGTATCATAATATACTCAAGAATGTTGTTGCACTTCTTGAGCAGAAAAGAAATATTCCAGACCGATGTGATGATCTACACTCCGAATTCCTGCTTTTTTGCAATACGTGAAATAATTAAGTTCGATTAACACTTGAACTACCATGAGTTGGTTAAGTAGTCAAAGCGACAACCATAAACTTGTATGTTTTTTAGGTTATGGGATCAATTCTTAGTGTCACTCATTTCAAGATGCCAAATGACTTACTAATATCATGGGTCGTGACCAAATGTTGCGTATTTTGGATAATGTGGGTGGGGTGGGTGGGAGGACGAAGGTGTCTTCGGGCATGGGAGTTTTATACAGCATCTGGCTGAATTCTTGATTACTGAACTTGCTAGTGAAAATATAGCACTTACGGGTCTGCAAACTATGATGGTGTTTGCACTGCTGGGAAATTTCATATTTTTGTACACTATGGACGTGAAGCTCCCATATGCTATTGGAAGGAGTTTTCTGAAAAGTTTCTGATCCATTTCCTGCTAATTTACTTCGCAAGATGTTCCTTTACAATGTTGGATTGTTTGTTTATGTCTCTGACCATTGGATTGAACACATGGTATGTAGGGGCACCATTTTTCTTTATTGGGACACGAGACAGAAAAACTTCGAAATGATATCGAGAAGATGCGTAGTGAGTTGAGGTTTGTGTTACCGTACATCAGTTTTTATGAAATGTATACTAGCTTCATATTTCAACATTAACTTGTTCTCTCTTGAATTAATCTTATTTGTGCAAAGACCTTTAACTATGGTGCAGGTATGAAATCGACAAAGTCACAGCTGGACAGCGATTGGATTTGAATCTTGAAAGAGGGTAAGTATACTTTTTCACGTAAAAAAAAGAGTACATTTTGGTTTGATTTGAGCTTTGCTTACAAATTCCATTGTTCACAAGTGCAGGAGGATACGGGATGAGCTAGCTAATCAGAATGCTGAAACAACTAACCTGACGAATAAACTCGATCGGGTAAGACCAACCTCCTGAAGAGAATGTTGGACAATTTTAGATAAAGTTTCTTAGTTTAGATAAGCAAATTAACATACAAATTATAGACTTAAAGAGACTTTAAAACTCATTGAAACTGTGTTCTACTTGTTCTAGATAGAAAAACAATAGTCTTGGGCTGTGTTAGAAGAACAATTCTTTGAGTTTTTTCTGCTGTGTGAGTTGGGGTAGGCTGCAAAAAACCCGAGTGCAGCACGGGATTCTCCCAAATATCGCTCTTCCGAGTTTTAACTCGTCTTCCTAAAACTTTTCAGGAAATTCATGGTCTGAGGGCACAGCTGGAAGCTGCCAAATACGATGTAATAAAATACTGCATTGGAACCCTTGTTTCCATCTCTGCTGTTGGTCTAGCTGTGTTGCGCATCTTAATGTAAACAGTTCAAAATCATGAACTGGTTTAGGGGATTGATCAAGAATTTGACAAGATTATTGTTTACTTTCAGTTTTTTTTTGTTCTTTAACCTTCTTTTAGAGAGGATTCTGGGAAGTTGAGCTATTTTCTCCGAGAGAGTTTCCATGTTTTATTTGTGTCGTCATGGAAATGGACCTCGTTGTAGCCATTTGAATTGTTCTCATTTGAGAATATGATTATAGATAGTGATAATAAACATTGTTGTAATTTTATGTGATCAGGGGATGTTCAACTCATTAGTATCCATGTTCTTGTGCCTTTTC

mRNA sequence

ATGTTGCTGCAGAGTCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGGCAATCGTTAGCCAATTCAGGTTTTCAAAGGTTTGGAGTCCCGAAGGCGTCTTCGTTTGAAAGCGCAATTTCCGACCATTCTGCAAATAGTTCATCGGCGGCATCCATCTCCTTGATTTCTCGGTATAGGCAGATCTCTCAGCTTGCGAAATCTAACGGGAAGCGATTGTTTCTAGTCGACACTTTAGCCCTAGTTAGGAAATTGGAGGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCAATAACAGCTGCCATTACTGAAGTGTTGAATGATAGCTTGGAAAATATATCTCATTCATTTGTTTCAAAGGGAGAGATGCAGAAAGTTGAAATGATCCAGGATTCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGGGCACCATTTTTCTTTATTGGGACACGAGACAGAAAAACTTCGAAATGATATCGAGAAGATGCGTAGTGAGTTGAGGTATGAAATCGACAAAGTCACAGCTGGACAGCGATTGGATTTGAATCTTGAAAGAGGGAGGATACGGGATGAGCTAGCTAATCAGAATGCTGAAACAACTAACCTGACGAATAAACTCGATCGGGAAATTCATGGTCTGAGGGCACAGCTGGAAGCTGCCAAATACGATGTAATAAAATACTGCATTGGAACCCTTGTTTCCATCTCTGCTGTTGGTCTAGCTGTGTTGCGCATCTTAATGTAAACAGTTCAAAATCATGAACTGGTTTAGGGGATTGATCAAGAATTTGACAAGATTATTGTTTACTTTCAGTTTTTTTTTGTTCTTTAACCTTCTTTTAGAGAGGATTCTGGGAAGTTGAGCTATTTTCTCCGAGAGAGTTTCCATGTTTTATTTGTGTCGTCATGGAAATGGACCTCGTTGTAGCCATTTGAATTGTTCTCATTTGAGAATATGATTATAGATAGTGATAATAAACATTGTTGTAATTTTATGTGATCAGGGGATGTTCAACTCATTAGTATCCATGTTCTTGTGCCTTTTC

Coding sequence (CDS)

ATGTTGCTGCAGAGTCGAATGGCCGCTGGTGCGGCTTGTAAACGGGTGGGGCAATCGTTAGCCAATTCAGGTTTTCAAAGGTTTGGAGTCCCGAAGGCGTCTTCGTTTGAAAGCGCAATTTCCGACCATTCTGCAAATAGTTCATCGGCGGCATCCATCTCCTTGATTTCTCGGTATAGGCAGATCTCTCAGCTTGCGAAATCTAACGGGAAGCGATTGTTTCTAGTCGACACTTTAGCCCTAGTTAGGAAATTGGAGGGTCAAGGGGTGCCCTCAAATCAAGCTGAGGCAATAACAGCTGCCATTACTGAAGTGTTGAATGATAGCTTGGAAAATATATCTCATTCATTTGTTTCAAAGGGAGAGATGCAGAAAGTTGAAATGATCCAGGATTCAAATTTGTCAAAATTCAAATCTGAAGTTCAAAGTTCACAGGGGCACCATTTTTCTTTATTGGGACACGAGACAGAAAAACTTCGAAATGATATCGAGAAGATGCGTAGTGAGTTGAGGTATGAAATCGACAAAGTCACAGCTGGACAGCGATTGGATTTGAATCTTGAAAGAGGGAGGATACGGGATGAGCTAGCTAATCAGAATGCTGAAACAACTAACCTGACGAATAAACTCGATCGGGAAATTCATGGTCTGAGGGCACAGCTGGAAGCTGCCAAATACGATGTAATAAAATACTGCATTGGAACCCTTGTTTCCATCTCTGCTGTTGGTCTAGCTGTGTTGCGCATCTTAATGTAA

Protein sequence

MLLQSRMAAGAACKRVGQSLANSGFQRFGVPKASSFESAISDHSANSSSAASISLISRYRQISQLAKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGEMQKVEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHGLRAQLEAAKYDVIKYCIGTLVSISAVGLAVLRILM
Homology
BLAST of CmaCh16G006430 vs. ExPASy Swiss-Prot
Match: P43557 (Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FMP32 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-16
Identity = 46/166 (27.71%), Postives = 97/166 (58.43%), Query Frame = 0

Query: 85  LEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGEMQKVEMIQDSNLSKFKSEVQSS 144
           +E      +QA  I   +T+ +   + ++S     + ++ ++   Q  + +K + ++ S+
Sbjct: 41  IENGKFQEDQATTIVEIMTDAIRGGVNHVSQDLAKREKLTQLSYQQRVDFAKLRDQLLSA 100

Query: 145 QGHHFSLLGHETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETT 204
               F  + +E E ++ND+EK+R++LR EI K  AG +LDL+LE+GRIR+E ++ + +  
Sbjct: 101 DRSEFHNIQNEYESVKNDLEKLRNKLREEITKTNAGFKLDLSLEKGRIREESSHHDLQIK 160

Query: 205 NLTNKLDREIHGLRAQLEAAKYDVIKYCIGTLVSISAVGLAVLRIL 251
            +  K+++E+  ++ Q+++ K  V+++ IG      A+ LA +R+L
Sbjct: 161 EIDTKIEQEVTNMKMQIDSVKTQVMQWLIGVCTGTFALVLAYMRLL 206

BLAST of CmaCh16G006430 vs. ExPASy Swiss-Prot
Match: Q9GZT6 (Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo sapiens OX=9606 GN=CCDC90B PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 6.7e-14
Identity = 54/196 (27.55%), Postives = 98/196 (50.00%), Query Frame = 0

Query: 71  KRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGEMQKVEMIQ 130
           +R    DT ALV+ LE  G    QAE I +A+T + N SL+ I    V++ + +      
Sbjct: 56  QRKLTFDTHALVQDLETHGFDKTQAETIVSALTALSNVSLDTIYKEMVTQAQQEITVQQL 115

Query: 131 DSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERG 190
            ++L   + ++   +   F+ L  E EK++ ++++++ +L +E  ++ A  +LD+NLER 
Sbjct: 116 MAHLDAIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLMHETSRIRADNKLDINLERS 175

Query: 191 RIRDELANQNAE----TTNLT--------------NKLDREIHGLRAQLEAAKYDVIKYC 249
           R+ D   +Q  +    TT  T              NK+D EI  L+  +E+ K + I+Y 
Sbjct: 176 RVTDMFTDQEKQLMETTTEFTKKDTQTKSIISETSNKIDAEIASLKTLMESNKLETIRYL 235

BLAST of CmaCh16G006430 vs. ExPASy Swiss-Prot
Match: Q6DJ87 (Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus tropicalis OX=8364 GN=ccdc90b PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-13
Identity = 53/197 (26.90%), Postives = 98/197 (49.75%), Query Frame = 0

Query: 71  KRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGEMQKVEMIQ 130
           +R    DT ALVR+LE  G    QAE I +A+  + N S++ +    V++ + +      
Sbjct: 69  QRKLTFDTHALVRELETHGFDKVQAETIVSALATLTNASIDTVYRDMVTRAQQEITVQQI 128

Query: 131 DSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERG 190
            ++L   + ++   +   F+ L  E EK++ ++E +R  L  E ++++A  +LD+NLER 
Sbjct: 129 MAHLDSIRKDMVILEKSEFATLRAENEKMKIELEHVRQHLLNETNRISADAKLDMNLERS 188

Query: 191 RIRD--------------ELANQNAET----TNLTNKLDREIHGLRAQLEAAKYDVIKYC 250
           R+ D              E   +NA T    T +  K+D +I  L+  +E+ K D ++Y 
Sbjct: 189 RLTDLFTEQEKKLMEASTEFHKKNATTDSVITEINKKIDIDIASLKTLMESHKLDTVRYM 248

BLAST of CmaCh16G006430 vs. ExPASy Swiss-Prot
Match: O14042 (Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fmp32 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.5e-13
Identity = 48/175 (27.43%), Postives = 96/175 (54.86%), Query Frame = 0

Query: 77  DTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGEMQKVEMIQDSNLSK 136
           ++L  VR L+  G+   ++E +   I+ V +D  E IS   V+K +  +V   Q  + + 
Sbjct: 42  NSLRFVRVLQEAGIDDKKSETLMRLISNVYSDMHEKISDFSVTKEQQDRVMYQQKVDFAH 101

Query: 137 FKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDEL 196
            +SE+QS +      L  + E+L +D+E++++  R +++  T+  RL LN++R    DE 
Sbjct: 102 LRSELQSIERQEMVALHSQVEQLFSDVERLKTSFRDQLNNSTSEARLQLNIDRLNHYDET 161

Query: 197 ANQNAETTNLTNKLDREIHGLRAQLEAAKYDVIKYCIGTLVSISAVGLAVLRILM 252
           A+Q+ +   L+ ++D E+   R QL + K   +++  G +    A+ LA +R+++
Sbjct: 162 ASQDLKLRELSAEIDTEMSNFRTQLASFKTQTLQWVFGIVTGSGALLLAYVRLII 216

BLAST of CmaCh16G006430 vs. ExPASy Swiss-Prot
Match: Q8C3X2 (Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus OX=10090 GN=Ccdc90b PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.3e-13
Identity = 51/196 (26.02%), Postives = 100/196 (51.02%), Query Frame = 0

Query: 71  KRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGEMQKVEMIQ 130
           +R    DT ALV+ LE  G    QA+ I + ++ + N SL+ I    V+K + +      
Sbjct: 56  QRKLTFDTHALVQDLETHGFDKTQAQTIVSVLSTLSNVSLDTIYKEMVTKAQQEITVQQL 115

Query: 131 DSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERG 190
            ++L   + ++   +   F+ L  E EK++ ++++++ +L  E  ++ A  +LD+NLER 
Sbjct: 116 MAHLDSIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLTNETSRIRADNKLDINLERS 175

Query: 191 RIRD--------------ELANQNAETTNL----TNKLDREIHGLRAQLEAAKYDVIKYC 249
           R+ D              E A ++ +T ++    +NK+D EI  L+  +E++K + I+Y 
Sbjct: 176 RVTDMFTDQEKQLIEATNEFAKKDTQTKSIISETSNKIDTEIASLKTLMESSKLETIRYL 235

BLAST of CmaCh16G006430 vs. TAIR 10
Match: AT2G16460.1 (Protein of unknown function (DUF1640) )

HSP 1 Score: 313.5 bits (802), Expect = 1.5e-85
Identity = 169/205 (82.44%), Postives = 185/205 (90.24%), Query Frame = 0

Query: 51  ASISLISR----YRQISQLAKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVL 110
           +S+ L+ R    YRQ S+L K+NG+R FLVDTLALVR LE QGVPS QAEAIT+AITEVL
Sbjct: 26  SSLGLLDRRPFPYRQFSELTKANGRRAFLVDTLALVRSLEAQGVPSKQAEAITSAITEVL 85

Query: 111 NDSLENISHSFVSKGEMQKVEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKM 170
           NDSLEN+S SFVSK EMQK+EMIQDSNLSKFKSEV+SSQ HHF++L  ETEKLR DIEKM
Sbjct: 86  NDSLENVSESFVSKAEMQKIEMIQDSNLSKFKSEVKSSQEHHFTVLQRETEKLRGDIEKM 145

Query: 171 RSELRYEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHGLRAQLEAAKY 230
           RSELRYEIDKVTAGQRLDLNLERGRIRDELANQN ETTNLTNKLDREIH LRAQLEA+KY
Sbjct: 146 RSELRYEIDKVTAGQRLDLNLERGRIRDELANQNTETTNLTNKLDREIHALRAQLEASKY 205

Query: 231 DVIKYCIGTLVSISAVGLAVLRILM 252
           +VIKYCIGTLVSISAVGLAVLRI++
Sbjct: 206 EVIKYCIGTLVSISAVGLAVLRIMI 230

BLAST of CmaCh16G006430 vs. TAIR 10
Match: AT3G51090.1 (Protein of unknown function (DUF1640) )

HSP 1 Score: 290.4 bits (742), Expect = 1.4e-78
Identity = 167/235 (71.06%), Postives = 187/235 (79.57%), Query Frame = 0

Query: 19  SLANSGFQRFGVPKASSFESAISDHSANSSSAASISLISRY--RQISQLAKSNGKRLFLV 78
           +L + G+      K   F S       +SSS  S S   ++  R ISQL K+NGKRLFLV
Sbjct: 71  TLRSFGYSNPAFDKTQEFRS-------SSSSLVSYSSFRQFHARFISQLIKTNGKRLFLV 130

Query: 79  DTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLENISHSFVSKGEMQKVEMIQDSNLSK 138
           DTLALVR LE QG+PS QAEAIT AITEVLNDSL  +S   VSKGEMQK EM Q+SNLSK
Sbjct: 131 DTLALVRSLEAQGLPSKQAEAITGAITEVLNDSLGVVSQLVVSKGEMQKAEMTQESNLSK 190

Query: 139 FKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELRYEIDKVTAGQRLDLNLERGRIRDEL 198
           FKSE+ SS  HHFSLL HE EKLRNDIE++RS++R+EIDKVTAGQRLDLNLE+GRIRDEL
Sbjct: 191 FKSEINSSLDHHFSLLQHENEKLRNDIERIRSDIRHEIDKVTAGQRLDLNLEKGRIRDEL 250

Query: 199 ANQNAETTNLTNKLDREIHGLRAQLEAAKYDVIKYCIGTLVSISAVGLAVLRILM 252
            NQN ET+NLTNKLDREIH LRAQLEAAKY+VIKYCIGTLVSISAVGLAVLRI+M
Sbjct: 251 QNQNGETSNLTNKLDREIHTLRAQLEAAKYEVIKYCIGTLVSISAVGLAVLRIVM 298

BLAST of CmaCh16G006430 vs. TAIR 10
Match: AT2G16460.2 (Protein of unknown function (DUF1640) )

HSP 1 Score: 212.2 bits (539), Expect = 4.7e-55
Identity = 114/145 (78.62%), Postives = 127/145 (87.59%), Query Frame = 0

Query: 51  ASISLISR----YRQISQLAKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVL 110
           +S+ L+ R    YRQ S+L K+NG+R FLVDTLALVR LE QGVPS QAEAIT+AITEVL
Sbjct: 26  SSLGLLDRRPFPYRQFSELTKANGRRAFLVDTLALVRSLEAQGVPSKQAEAITSAITEVL 85

Query: 111 NDSLENISHSFVSKGEMQKVEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKM 170
           NDSLEN+S SFVSK EMQK+EMIQDSNLSKFKSEV+SSQ HHF++L  ETEKLR DIEKM
Sbjct: 86  NDSLENVSESFVSKAEMQKIEMIQDSNLSKFKSEVKSSQEHHFTVLQRETEKLRGDIEKM 145

Query: 171 RSELRYEIDKVTAGQRLDLNLERGR 192
           RSELRYEIDKVTAGQRLDLNLERG+
Sbjct: 146 RSELRYEIDKVTAGQRLDLNLERGK 170

BLAST of CmaCh16G006430 vs. TAIR 10
Match: AT2G35090.1 (Protein of unknown function (DUF1640) )

HSP 1 Score: 65.5 bits (158), Expect = 7.1e-11
Identity = 55/200 (27.50%), Postives = 96/200 (48.00%), Query Frame = 0

Query: 52  SISLISRYRQISQLAKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLE 111
           +IS++   R +S  + S+G     VD L +V+ LE   VPS QAEA+T AIT  L     
Sbjct: 7   TISIVRTGRGLSYRSLSSGNH---VDKLGMVKALEAINVPSTQAEALTGAITSGL----- 66

Query: 112 NISHSFVSKGEMQKVEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 171
                              +S + K K+++  S+ +  + +  E  K+R DI K+R+   
Sbjct: 67  -------------------ESVVEKVKADIAKSEEYQSTSVAEEVRKMRADINKVRA--- 126

Query: 172 YEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHGLRAQLEAAKYDVIKY 231
            +I  + A +R D ++                    NK++   + L+A+ E  KY+ +KY
Sbjct: 127 -DIATMQAEKRCDHDIH------------------VNKVEMGFNELKAEFETTKYEAVKY 157

Query: 232 CIGTLVSISAVGLAVLRILM 252
              TLV+++AVG ++L +++
Sbjct: 187 AAYTLVAVAAVGSSMLFVMI 157

BLAST of CmaCh16G006430 vs. TAIR 10
Match: AT2G35070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen tube development, pollen development; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1640) (TAIR:AT2G35090.1); Has 62 Blast hits to 62 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.7 bits (143), Expect = 3.9e-09
Identity = 53/196 (27.04%), Postives = 91/196 (46.43%), Query Frame = 0

Query: 52  SISLISRYRQISQLAKSNGKRLFLVDTLALVRKLEGQGVPSNQAEAITAAITEVLNDSLE 111
           +IS++   R +S  + S+G     VD L +V+ LE   VPS QAEA+T AIT        
Sbjct: 7   TISIVRIGRGLSYRSLSSGNH---VDKLGMVKALEAINVPSTQAEALTGAITSGF----- 66

Query: 112 NISHSFVSKGEMQKVEMIQDSNLSKFKSEVQSSQGHHFSLLGHETEKLRNDIEKMRSELR 171
                              +S + K K+++  S+ +  + +  E  K+R DIEKMR+   
Sbjct: 67  -------------------ESVMGKVKADIAKSEEYKSTRVAEEFRKMRADIEKMRA--- 126

Query: 172 YEIDKVTAGQRLDLNLERGRIRDELANQNAETTNLTNKLDREIHGLRAQLEAAKYDVIKY 231
            +I  + A +R D +                  N  +K+++  + L+ + +A KY ++KY
Sbjct: 127 -DIATIQAEERCDHD------------------NHIHKVEQGFNELKDEFDATKYKIVKY 153

Query: 232 CIGTLVSISAVGLAVL 248
            I TL+ ++A    +L
Sbjct: 187 AIYTLIPVAAAETGML 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P435571.4e-1627.71Protein FMP32, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S... [more]
Q9GZT66.7e-1427.55Coiled-coil domain-containing protein 90B, mitochondrial OS=Homo sapiens OX=9606... [more]
Q6DJ871.9e-1326.90Coiled-coil domain-containing protein 90B, mitochondrial OS=Xenopus tropicalis O... [more]
O140422.5e-1327.43Protein fmp32, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
Q8C3X23.3e-1326.02Coiled-coil domain-containing protein 90B, mitochondrial OS=Mus musculus OX=1009... [more]
Match NameE-valueIdentityDescription
AT2G16460.11.5e-8582.44Protein of unknown function (DUF1640) [more]
AT3G51090.11.4e-7871.06Protein of unknown function (DUF1640) [more]
AT2G16460.24.7e-5578.62Protein of unknown function (DUF1640) [more]
AT2G35090.17.1e-1127.50Protein of unknown function (DUF1640) [more]
AT2G35070.13.9e-0927.04unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: pollen t... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 244..251
NoneNo IPR availableCOILSCoilCoilcoord: 193..213
NoneNo IPR availableGENE3D1.20.5.340coord: 77..177
e-value: 8.9E-25
score: 89.0
NoneNo IPR availablePANTHERPTHR14360:SF22FMP32-LIKE PROTEINcoord: 11..251
IPR024461Coiled-coil domain-containing protein 90-likePFAMPF07798DUF1640coord: 76..250
e-value: 2.8E-74
score: 248.9
IPR024461Coiled-coil domain-containing protein 90-likePANTHERPTHR14360UNCHARACTERIZEDcoord: 11..251

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G006430.1CmaCh16G006430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion