CmaCh16G005430 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh16G005430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr16: 2791622 .. 2792035 (+)
RNA-Seq Expression	CmaCh16G005430
Synteny	CmaCh16G005430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGCAATTTGATTTCAAGCTTGAACAAAAAGTTGCAGGCGGTTGAGATCAGTAATCGCTGCAGACGAACGAAGAAGACGACTAACGTATACAGACGTGATATGAGCAAGAAGAAGCAGCCGCAGTCGCCATCGCCGTCGCAGGGGAAGCCGGAGATCGAGAAAGTGAAGAAGAGAGTGAGATTTGCAGATACGGAACCGGTGATAATCGCCATTGACAGAGAGGAGCGGAGTACAGAGGAGGAAACAGAGAAGAAAGTGGTTAGAATTACGGTGAAATTAACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGATGGCGGCGTTCTAGAATTCGGAGATGTTGCGAGTGAGCTCATGCGGATTCCTGCGGCTCGCGTTAGCTCTTCTATGGTGGTCAATTGA

mRNA sequence

ATGATCGGCAATTTGATTTCAAGCTTGAACAAAAAGTTGCAGGCGGTTGAGATCAGTAATCGCTGCAGACGAACGAAGAAGACGACTAACGTATACAGACGTGATATGAGCAAGAAGAAGCAGCCGCAGTCGCCATCGCCGTCGCAGGGGAAGCCGGAGATCGAGAAAGTGAAGAAGAGAGTGAGATTTGCAGATACGGAACCGGTGATAATCGCCATTGACAGAGAGGAGCGGAGTACAGAGGAGGAAACAGAGAAGAAAGTGGTTAGAATTACGGTGAAATTAACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGATGGCGGCGTTCTAGAATTCGGAGATGTTGCGAGTGAGCTCATGCGGATTCCTGCGGCTCGCGTTAGCTCTTCTATGGTGGTCAATTGA

Coding sequence (CDS)

ATGATCGGCAATTTGATTTCAAGCTTGAACAAAAAGTTGCAGGCGGTTGAGATCAGTAATCGCTGCAGACGAACGAAGAAGACGACTAACGTATACAGACGTGATATGAGCAAGAAGAAGCAGCCGCAGTCGCCATCGCCGTCGCAGGGGAAGCCGGAGATCGAGAAAGTGAAGAAGAGAGTGAGATTTGCAGATACGGAACCGGTGATAATCGCCATTGACAGAGAGGAGCGGAGTACAGAGGAGGAAACAGAGAAGAAAGTGGTTAGAATTACGGTGAAATTAACGAAGCAAGAAGCGAATCGGATGCTTTCGAGGTGCTCCGATGGCGGCGTTCTAGAATTCGGAGATGTTGCGAGTGAGCTCATGCGGATTCCTGCGGCTCGCGTTAGCTCTTCTATGGTGGTCAATTGA

Protein sequence

MIGNLISSLNKKLQAVEISNRCRRTKKTTNVYRRDMSKKKQPQSPSPSQGKPEIEKVKKRVRFADTEPVIIAIDREERSTEEETEKKVVRITVKLTKQEANRMLSRCSDGGVLEFGDVASELMRIPAARVSSSMVVN

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh16G005430 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh16G005430 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..58
None	No IPR available	PANTHER	PTHR36782	BNAC03G62080D PROTEIN	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh16G005430.1	CmaCh16G005430.1	mRNA