Homology
BLAST of CmaCh16G001180 vs. ExPASy Swiss-Prot
Match:
Q9LKF9 (Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CPSF100 PE=1 SV=2)
HSP 1 Score: 1137.9 bits (2942), Expect = 0.0e+00
Identity = 555/708 (78.39%), Postives = 639/708 (90.25%), Query Frame = 0
Query: 372 MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 431
MGTSVQVTPLCGVYNENPLSYLVS+DGFNFLIDCGWND FD +LL+PLSRVASTIDAVL+
Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60
Query: 432 SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 491
SHPDTLH+GALPYAMKQLGLSAPVY+TEPV+RLGLLTMYDQF++RKQVS+FDLFTLDDID
Sbjct: 61 SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120
Query: 492 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 551
SAFQ V RLTYSQN+HLSGKGEGIVIAPHVAGH+LGG++W+ITKDGEDVIYAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180
Query: 552 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 611
RHLNGT+L+SFVRPAVLITDAY+AL NQ R+Q+DKEF DTI K L GNVLLPVDTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240
Query: 612 GRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAF 671
GRVLEL+ ILE +W + +FPI+FLTYV+SSTIDY+KSFLEWMSDSI+KSFE +R+NAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300
Query: 672 LLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFG 731
LL+HVTLLINK++LDNAP GPKVVLASMASLEAG++ +IFVEWA D +NLVLF+E GQFG
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360
Query: 732 TLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNR-KKEEALKASLLKEEQSKASH 791
TLARMLQ+ PPPK VKVT+SKRVPL G+EL+AYEEEQNR K+EEAL+ASL+KEE++KASH
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420
Query: 792 GTDNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDD 851
G+D+++ +PMIID + DV+GSHG AY+DI IDGFVPPS+SV+PMFP+Y+NTS WDD
Sbjct: 421 GSDDNSSEPMIID--TKTTHDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 480
Query: 852 FGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 911
FGE+INPDDYVIKDEDMD+ A H G DVDG+LDE A+L+LD +PSKV+SNEL V V CS
Sbjct: 481 FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 540
Query: 912 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNVCPHVYAPQIEET 971
L MD+EGRSDGRSIKS+++HV+PLKLVLVH AEATEH+KQHCL N+CPHVYAPQIEET
Sbjct: 541 LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 600
Query: 972 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLPLSKAALPHK 1031
+DVTSDLCAYKVQLSEKLMSNV+FKKLGD E++W+D++VGKTE SLLP+ AA PHK
Sbjct: 601 VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHK 660
Query: 1032 SVLVGDLKMADFKQFLSSKGIQVEFA-GGALRCGEYVTLRKVSDARQK 1077
VLVGDLK+ADFKQFLSSKG+QVEFA GGALRCGEYVTLRKV QK
Sbjct: 661 PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQK 706
BLAST of CmaCh16G001180 vs. ExPASy Swiss-Prot
Match:
Q652P4 (Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0569400 PE=2 SV=1)
HSP 1 Score: 1047.7 bits (2708), Expect = 1.0e-304
Identity = 519/715 (72.59%), Postives = 608/715 (85.03%), Query Frame = 0
Query: 372 MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 431
MGTSVQVTPL G Y E PL YL++VDGF FL+DCGW D DP+ LQPL++VA TIDAVL+
Sbjct: 1 MGTSVQVTPLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLL 60
Query: 432 SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 491
SH DT+HLGALPYAMK LGLSAPVY+TEPV+RLG+LT+YD FI+R+QVS+FDLFTLDDID
Sbjct: 61 SHADTMHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDID 120
Query: 492 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 551
+AFQ V RL YSQNH L+ KGEGIVIAPHVAGH LGGT+WKITKDGEDV+YAVDFNHRKE
Sbjct: 121 AAFQNVVRLKYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKE 180
Query: 552 RHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAG 611
RHLNGT L SFVRPAVLITDAYNALNN Y+RQ+D++F D + K L G+VLLP+DTAG
Sbjct: 181 RHLNGTALGSFVRPAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAG 240
Query: 612 RVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFL 671
RVLE++ ILE YW + L +PI+FLT V++ST+DY+KSFLEWM+DSI+KSFEHTR+NAFL
Sbjct: 241 RVLEILLILEQYWAQRHLIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFL 300
Query: 672 LKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFGT 731
LK VT +INK EL+ D PKVVLASMASLE G+SHDIFV+ A +AKNLVLF+E+GQFGT
Sbjct: 301 LKCVTQIINKDELEKLGDAPKVVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGT 360
Query: 732 LARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNR-KKEEALKASLLKEEQSKASHG 791
LARMLQ DPPPKAVKVT+SKR+PL GDEL AYEEEQ R KKEEALKASL KEE+ KAS G
Sbjct: 361 LARMLQVDPPPKAVKVTMSKRIPLVGDELKAYEEEQERIKKEEALKASLNKEEEKKASLG 420
Query: 792 TDNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDF 851
++ DPM+IDAS++ P GS G DI IDGFVPPS+SV+PMFPF+ENTS WDDF
Sbjct: 421 SNAKASDPMVIDASTSRKPSNAGSKFGGNVDILIDGFVPPSSSVAPMFPFFENTSEWDDF 480
Query: 852 GEVINPDDYVIKDEDMDQS-APHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 911
GEVINP+DY++K E+MD + P G +D LDE +A L+LD PSKV+SNE+TVQVKCS
Sbjct: 481 GEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLDEGSARLLLDSTPSKVISNEMTVQVKCS 540
Query: 912 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNVCPHVYAPQIEET 971
L YMDFEGRSDGRS+KS+++HVAPLKLVLVHG+AEATEH+K HC KN HVYAPQIEET
Sbjct: 541 LAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEATEHLKMHCSKNSDLHVYAPQIEET 600
Query: 972 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLPLSKAALPHK 1031
IDVTSDLCAYKVQLSEKLMSNV+ KKLG++EI+W+DA+VGKT++ L+LLP S HK
Sbjct: 601 IDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGKTDD-KLTLLPPSSTPAAHK 660
Query: 1032 SVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQKLHTTNECI 1085
SVLVGDLK+ADFKQFL++KG+QVEFAGGALRCGEY+TLRK+ DA QK T ++ I
Sbjct: 661 SVLVGDLKLADFKQFLANKGLQVEFAGGALRCGEYITLRKIGDAGQKGSTGSQQI 714
BLAST of CmaCh16G001180 vs. ExPASy Swiss-Prot
Match:
Q93Z32 (Signal peptide peptidase-like 1 OS=Arabidopsis thaliana OX=3702 GN=SPPL1 PE=2 SV=1)
HSP 1 Score: 610.9 bits (1574), Expect = 3.2e-173
Identity = 312/366 (85.25%), Postives = 338/366 (92.35%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
ME+LW LLYLLEPAP TLIVTAV VTF SAFRALNYGKEMERNRDFSEASITLD SQALM
Sbjct: 1 METLWTLLYLLEPAPATLIVTAVTVTFASAFRALNYGKEMERNRDFSEASITLDSSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSSCSLLLMFYLFSSVSQLLTAFTA+ASVSSLF+ LSPY +K+Q GL+DP++SRC
Sbjct: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAIASVSSLFYWLSPYAVYMKTQLGLSDPFLSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTRIQGLLL+AC V AWL+SGHW+LNNLLGISIC+AFVSHVRLPN+KICAMLLV
Sbjct: 121 CSKSFTRIQGLLLVACAMTVVAWLISGHWVLNNLLGISICIAFVSHVRLPNIKICAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSERFFGANVMV+VATQQASNPVHTVANSL+LPGLQLITKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERFFGANVMVAVATQQASNPVHTVANSLNLPGLQLITKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMR-ARGHK 300
FPRNLLGGV+PG +A+DFMMLGLGDMAIPAM LALVL FDHRK+RD VN+ D++ ++GHK
Sbjct: 241 FPRNLLGGVVPGVSASDFMMLGLGDMAIPAMLLALVLCFDHRKTRDVVNIFDLKSSKGHK 300
Query: 301 YIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGP-L 360
YIWYALPGYAIGLV ALAAGVLTHSPQPALLYLVPSTLGPVI +SW RKD ELWEGP L
Sbjct: 301 YIWYALPGYAIGLVAALAAGVLTHSPQPALLYLVPSTLGPVIFMSWRRKDLAELWEGPAL 360
Query: 361 PNPNDK 365
NP +K
Sbjct: 361 SNPIEK 366
BLAST of CmaCh16G001180 vs. ExPASy Swiss-Prot
Match:
Q7G7C7 (Signal peptide peptidase-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPPL1 PE=2 SV=1)
HSP 1 Score: 548.5 bits (1412), Expect = 1.9e-154
Identity = 276/365 (75.62%), Postives = 317/365 (86.85%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
MESLWKL YLLEPA + LI+TAV+V + SA RAL++G+EMERN DFSEASITLDRSQALM
Sbjct: 1 MESLWKLSYLLEPASLALILTAVSVAYASASRALDHGREMERNLDFSEASITLDRSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IP+ SSCSLLLMFYLFSSVS L+TAFTAVAS +LFFCLSPY+ C++S+ G+ DP+VSRC
Sbjct: 61 IPLASSCSLLLMFYLFSSVSHLVTAFTAVASAMALFFCLSPYVNCVRSRLGVGDPFVSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSK FTR+QGLL+ C G V AWLVSGHW+LNNLLGISIC+AFVSHVRLPN+KICA+LLV
Sbjct: 121 CSKPFTRLQGLLVAICVGTVVAWLVSGHWLLNNLLGISICIAFVSHVRLPNIKICALLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYD+FWVFFSERFFGANVMVSVATQ+ASNPVHTVAN LSLPGLQLITKKLELPVK+V
Sbjct: 181 CLFVYDVFWVFFSERFFGANVMVSVATQKASNPVHTVANKLSLPGLQLITKKLELPVKLV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDM-RARGHK 300
FPR+L+GG+ PG + D+MMLGLGDMAIP M LALVLSFDHRK +D DM ++ K
Sbjct: 241 FPRSLMGGLAPGSSPGDYMMLGLGDMAIPGMLLALVLSFDHRKIKDMSVSQDMPPSKQRK 300
Query: 301 YIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLP 360
Y+WYAL GY +GLVTALAAG+L+ SPQPALLYLVPSTLGPV+ +SW+R + ELWEG P
Sbjct: 301 YVWYALTGYGVGLVTALAAGILSQSPQPALLYLVPSTLGPVMYMSWLRNELWELWEGSRP 360
Query: 361 NPNDK 365
NDK
Sbjct: 361 IINDK 365
BLAST of CmaCh16G001180 vs. ExPASy Swiss-Prot
Match:
Q9V3D6 (Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila melanogaster OX=7227 GN=Cpsf100 PE=1 SV=1)
HSP 1 Score: 523.5 bits (1347), Expect = 6.7e-147
Identity = 286/739 (38.70%), Postives = 437/739 (59.13%), Query Frame = 0
Query: 372 MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 431
M + +++ + G +E+P Y++ +D L+DCGW++ FD ++ L R T+DAVL+
Sbjct: 1 MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLL 60
Query: 432 SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 491
SHPD HLGALPY + +LGL+ P+Y+T PV+++G + MYD +++ + +FDLF+LDD+D
Sbjct: 61 SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD 120
Query: 492 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDG-EDVIYAVDFNHRK 551
+AF+ +T+L Y+Q L KG GI I P AGH++GGT+WKI K G ED++YA DFNH+K
Sbjct: 121 TAFEKITQLKYNQTVSLKDKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK 180
Query: 552 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 611
ERHL+G L+ RP++LITDAYNA Q RR +D++ I +T+R NGNVL+ VDTA
Sbjct: 181 ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA 240
Query: 612 GRVLELIQILEWYWEEES---LNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRN 671
GRVLEL +L+ W+ + + + + L V+ + I++ KS +EWMSD + K+FE RN
Sbjct: 241 GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN 300
Query: 672 NAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERG 731
N F KH+ L + +++ P GPKVVLAS LE+G++ D+FV+WA++A N ++ + R
Sbjct: 301 NPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRT 360
Query: 732 QFGTLA-RMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSK 791
GTLA +++ P K +++ V +RV L G EL EE R + E L ++K + +
Sbjct: 361 SPGTLAMELVENCAPGKQIELDVRRRVDLEGAEL----EEYLRTQGEKLNPLIVKPDVEE 420
Query: 792 ASHGTDNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSA 851
S D + +I ++ G H GF + MFP++E
Sbjct: 421 ESSSESEDDIEMSVITGKHDIVVRPEGRHH--------SGFFKSNKRHHVMFPYHEEKVK 480
Query: 852 WDDFGEVINPDDYVIKD--------------EDMDQSAPHGGVDVDGKLDETAANLILDM 911
D++GE+IN DDY I D E++ + P G + ++ L
Sbjct: 481 CDEYGEIINLDDYRIADATGYEFVPMEEQNKENVKKEEPGIGAEQQANGGIVDNDVQLLE 540
Query: 912 KPSKVVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHIKQH 971
KP+K++S T++V + +DFEGRSDG S+ ILS + P +++++HGTAE T+ + +H
Sbjct: 541 KPTKLISQRKTIEVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVARH 600
Query: 972 CLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDA------ 1031
C +NV V+ PQ E IDVTS++ Y+V+L+E L+S + F+K D E++W+D
Sbjct: 601 CEQNVGARVFTPQKGEIIDVTSEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRV 660
Query: 1032 -------------DVGKTENGTLSLLPLSKAALP-HKSVLVGDLKMADFKQFLSSKGIQV 1071
D E TL+L L+ +P H SVL+ +LK++DFKQ L I
Sbjct: 661 KAIEAPMDVTVEQDASVQEGKTLTLETLADDEIPIHNSVLINELKLSDFKQTLMRNNINS 720
BLAST of CmaCh16G001180 vs. ExPASy TrEMBL
Match:
A0A5D3DH28 (Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00660 PE=3 SV=1)
HSP 1 Score: 2044.6 bits (5296), Expect = 0.0e+00
Identity = 1041/1142 (91.16%), Postives = 1062/1142 (92.99%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
MESLWKLLYLLEPAP TLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM
Sbjct: 1 MESLWKLLYLLEPAPATLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMA LKSQFGLADPYVSRC
Sbjct: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMAYLKSQFGLADPYVSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTRIQGLLLLAC GLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVK+CAMLLV
Sbjct: 121 CSKSFTRIQGLLLLACSGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKVCAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMRARGHKY 300
FPRNLLGGVIPGK+ATDFMMLGLGDMAIPAMFLALVL FDHRKSRDTVNLLD+ RGHKY
Sbjct: 241 FPRNLLGGVIPGKHATDFMMLGLGDMAIPAMFLALVLCFDHRKSRDTVNLLDIHTRGHKY 300
Query: 301 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLPN 360
IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWE
Sbjct: 301 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEESHTY 360
Query: 361 PNDKI--------------------------------------VWSFVSMGTSVQVTPLC 420
ND + WSF++MGTSVQVTPLC
Sbjct: 361 QNDDVWFDRGKKKKKRKRHRPAIFPNTFFFFLQNEGSSRELQRAWSFIAMGTSVQVTPLC 420
Query: 421 GVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL 480
GVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL
Sbjct: 421 GVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL 480
Query: 481 PYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQVVTRLTY 540
PYAMKQLGLSAPV+STEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQV+TRLTY
Sbjct: 481 PYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQVITRLTY 540
Query: 541 SQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESF 600
SQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESF
Sbjct: 541 SQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESF 600
Query: 601 VRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEW 660
VRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEW
Sbjct: 601 VRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEW 660
Query: 661 YWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFLLKHVTLLINKS 720
YWEEESLN+PIFFLTYVASSTIDYIKSFLEWMSD+IAKSFEHTRNNAFLLKHVTLLINKS
Sbjct: 661 YWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLINKS 720
Query: 721 ELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFGTLARMLQADPPP 780
ELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNLVLFSERGQFGTLARMLQADPPP
Sbjct: 721 ELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGTLARMLQADPPP 780
Query: 781 KAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGTDNDTGDPMIID 840
KAVKVTVSKRVPLTGDEL+AYEEEQNRKKEEALKASLLKEEQSKASHG DNDTGDPMIID
Sbjct: 781 KAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGADNDTGDPMIID 840
Query: 841 ASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFGEVINPDDYVIK 900
ASSN APDV SHGGAYRDI IDGFVPPSTSV+PMFPFYENTSAWDDFGEVINPDDYVIK
Sbjct: 841 ASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFGEVINPDDYVIK 900
Query: 901 DEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGR 960
DEDMDQ+A H G DVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGR
Sbjct: 901 DEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGR 960
Query: 961 SIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQ 1020
SIKSILSHVAPLKLVLVHGTAEATEH+KQHCLKNVCPHVYAPQ+EETIDVTSDLCAYKVQ
Sbjct: 961 SIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQVEETIDVTSDLCAYKVQ 1020
Query: 1021 LSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFK 1080
LSEKLMSNVLFKKLGDYEI+WLDA+VGKTENGTLSLLPLSKA PHKSVLVGDLKMADFK
Sbjct: 1021 LSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAPAPHKSVLVGDLKMADFK 1080
Query: 1081 QFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQKLHTTNECIFACDGVVWLVPFSWFASK 1105
QFL+SKGIQVEFAGGALRCGEYVTLRKV+DA QKLH TNE + C FASK
Sbjct: 1081 QFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKLHATNE-MHIC-----------FASK 1130
BLAST of CmaCh16G001180 vs. ExPASy TrEMBL
Match:
A0A5A7ST61 (Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001300 PE=3 SV=1)
HSP 1 Score: 2040.0 bits (5284), Expect = 0.0e+00
Identity = 1041/1143 (91.08%), Postives = 1062/1143 (92.91%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
MESLWKLLYLLEPAP TLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM
Sbjct: 1 MESLWKLLYLLEPAPATLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMA LKSQFGLADPYVSRC
Sbjct: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMAYLKSQFGLADPYVSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTRIQGLLLLAC GLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVK+CAMLLV
Sbjct: 121 CSKSFTRIQGLLLLACSGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKVCAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMRARGHKY 300
FPRNLLGGVIPGK+ATDFMMLGLGDMAIPAMFLALVL FDHRKSRDTVNLLD+ RGHKY
Sbjct: 241 FPRNLLGGVIPGKHATDFMMLGLGDMAIPAMFLALVLCFDHRKSRDTVNLLDIHTRGHKY 300
Query: 301 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLPN 360
IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWE
Sbjct: 301 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEESHTY 360
Query: 361 PNDKI--------------------------------------VWSFVSMGTSVQVTPLC 420
ND + WSF++MGTSVQVTPLC
Sbjct: 361 QNDDVWFDRGKKKKKRKRHRPAIFPNTFFFFLQNEGSSRELQRAWSFIAMGTSVQVTPLC 420
Query: 421 GVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL 480
GVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL
Sbjct: 421 GVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL 480
Query: 481 PYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQVVTRLTY 540
PYAMKQLGLSAPV+STEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQV+TRLTY
Sbjct: 481 PYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQVITRLTY 540
Query: 541 SQNHHLS-GKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILES 600
SQNHHLS GKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILES
Sbjct: 541 SQNHHLSGGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILES 600
Query: 601 FVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILE 660
FVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILE
Sbjct: 601 FVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILE 660
Query: 661 WYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFLLKHVTLLINK 720
WYWEEESLN+PIFFLTYVASSTIDYIKSFLEWMSD+IAKSFEHTRNNAFLLKHVTLLINK
Sbjct: 661 WYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLINK 720
Query: 721 SELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFGTLARMLQADPP 780
SELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNLVLFSERGQFGTLARMLQADPP
Sbjct: 721 SELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGTLARMLQADPP 780
Query: 781 PKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGTDNDTGDPMII 840
PKAVKVTVSKRVPLTGDEL+AYEEEQNRKKEEALKASLLKEEQSKASHG DNDTGDPMII
Sbjct: 781 PKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGADNDTGDPMII 840
Query: 841 DASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFGEVINPDDYVI 900
DASSN APDV SHGGAYRDI IDGFVPPSTSV+PMFPFYENTSAWDDFGEVINPDDYVI
Sbjct: 841 DASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFGEVINPDDYVI 900
Query: 901 KDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDG 960
KDEDMDQ+A H G DVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDG
Sbjct: 901 KDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDG 960
Query: 961 RSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKV 1020
RSIKSILSHVAPLKLVLVHGTAEATEH+KQHCLKNVCPHVYAPQ+EETIDVTSDLCAYKV
Sbjct: 961 RSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQVEETIDVTSDLCAYKV 1020
Query: 1021 QLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADF 1080
QLSEKLMSNVLFKKLGDYEI+WLDA+VGKTENGTLSLLPLSKA PHKSVLVGDLKMADF
Sbjct: 1021 QLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAPAPHKSVLVGDLKMADF 1080
Query: 1081 KQFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQKLHTTNECIFACDGVVWLVPFSWFAS 1105
KQFL+SKGIQVEFAGGALRCGEYVTLRKV+DA QKLH TNE + C FAS
Sbjct: 1081 KQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKLHATNE-MHIC-----------FAS 1131
BLAST of CmaCh16G001180 vs. ExPASy TrEMBL
Match:
A0A5N6L0H3 (Cleavage and polyadenylation specificity factor subunit 2 OS=Carpinus fangiana OX=176857 GN=FH972_025130 PE=3 SV=1)
HSP 1 Score: 1811.6 bits (4691), Expect = 0.0e+00
Identity = 910/1080 (84.26%), Postives = 989/1080 (91.57%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
M+ LWKL YLLEPAP+TLIVTAVAVTFGSAFRALNYGKEMERNRD SEASITLDRSQALM
Sbjct: 1 MDPLWKLSYLLEPAPITLIVTAVAVTFGSAFRALNYGKEMERNRDLSEASITLDRSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSSCSLLLMFYLFSSVSQLLTAFTA+ASVSSLFFCLSPY+A +KSQFGL DP+VSRC
Sbjct: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAIASVSSLFFCLSPYVAYMKSQFGLTDPFVSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTR QGLLLL C G+VAAWLVSGHWILNNLLGISIC+AFVSHVRLPN+KICAMLLV
Sbjct: 121 CSKSFTRTQGLLLLTCSGIVAAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMR-ARGHK 300
FPRNLLGGV+PG++A DFMMLGLGDMAIP+M LALVL FDHRKSRD+VNL+D+ A+GHK
Sbjct: 241 FPRNLLGGVVPGESARDFMMLGLGDMAIPSMLLALVLCFDHRKSRDSVNLIDINSAKGHK 300
Query: 301 YIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLP 360
YIWYAL GYAIGLVTALAAGVLTHSPQPALLYLVPSTLGP+I +S+IRK+ +ELWEG +P
Sbjct: 301 YIWYALTGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPIIVVSYIRKELMELWEGNIP 360
Query: 361 NPNDKIVWSFVSMGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPL 420
N NDK +VTPLCGVYNENPLSY+VS+DGFNFLIDCGW+DHFDP +LQPL
Sbjct: 361 NLNDK--------AHQTEVTPLCGVYNENPLSYVVSIDGFNFLIDCGWHDHFDPTILQPL 420
Query: 421 SRVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQV 480
S+VASTIDAVL+S+PDTLHLGALPYA+KQLGLSAPVY+TEP+YRLGLLTMYDQ+++RKQV
Sbjct: 421 SKVASTIDAVLLSYPDTLHLGALPYAVKQLGLSAPVYTTEPIYRLGLLTMYDQYLSRKQV 480
Query: 481 SEFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGED 540
SEFDLFTLDDIDSAFQ VTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGT+WKITKDGED
Sbjct: 481 SEFDLFTLDDIDSAFQKVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGED 540
Query: 541 VIYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRR-QKDKEFGDTIQKTLR 600
VIYAVD NHRKERHLNGT+L SFVRPAVLITDAYNALNNQPYRR +K+ EFG+TI+KTL
Sbjct: 541 VIYAVDLNHRKERHLNGTVLASFVRPAVLITDAYNALNNQPYRRGEKENEFGETIKKTLG 600
Query: 601 ANGNVLLPVDTAGRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSI 660
A GNVLLPVDTAGRV ELI ILE YW ++SLN+PIFFLTYVASSTIDY+KSFLEWMSDSI
Sbjct: 601 AGGNVLLPVDTAGRVFELILILEQYWADKSLNYPIFFLTYVASSTIDYVKSFLEWMSDSI 660
Query: 661 AKSFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAK 720
KSFE R N FLLK+VT LINKSELDNAPDGPKVV+ASMASLE G+SHDIFVEWA+DAK
Sbjct: 661 PKSFEQNRENPFLLKNVTFLINKSELDNAPDGPKVVIASMASLEVGFSHDIFVEWASDAK 720
Query: 721 NLVLFSERGQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNR-KKEEALKA 780
NLVLF+ERGQF TLAR+LQADPPPKAVKV +SKRVPL G+EL+AYEEEQNR KKEE LKA
Sbjct: 721 NLVLFTERGQFATLARILQADPPPKAVKVAMSKRVPLVGEELIAYEEEQNRIKKEETLKA 780
Query: 781 SLLKEEQSKASHGTDNDTGDPMIIDASSNVA-PDVVGSHGGAYRDIFIDGFVPPSTSVSP 840
+L+KEE +KASH D D DPM++D S+ A PDV G HGG YRDI IDGFVP STSV+P
Sbjct: 781 TLIKEE-TKASHDADIDASDPMVVDVSNTHALPDVAGPHGGGYRDILIDGFVPSSTSVAP 840
Query: 841 MFPFYENTSAWDDFGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSK 900
MFPFY+NT WDDFGEVINPDDYVIKDEDMDQ+ + G DGK DE +A++ILD KPSK
Sbjct: 841 MFPFYDNTFEWDDFGEVINPDDYVIKDEDMDQTGMNVGGYSDGKFDEGSASMILDTKPSK 900
Query: 901 VVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKN 960
VVSNELTVQVKC L YMDFEGRSDGRSIKSILSHVAPLKLVLVHG+AEATEH+KQHCLK+
Sbjct: 901 VVSNELTVQVKCLLIYMDFEGRSDGRSIKSILSHVAPLKLVLVHGSAEATEHLKQHCLKH 960
Query: 961 VCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTL 1020
VCP VYAP IEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEI+W+DA+VGKT++G L
Sbjct: 961 VCPQVYAPHIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTDDGML 1020
Query: 1021 SLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQK 1077
SL P S AA PHKSVLVGDLKMADFKQFL+SKGIQVEFAGGALRCGEYVT+RKV DA QK
Sbjct: 1021 SLNPCSTAAPPHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTIRKVGDASQK 1071
BLAST of CmaCh16G001180 vs. ExPASy TrEMBL
Match:
A0A498JJ41 (Cleavage and polyadenylation specificity factor subunit 2 OS=Malus domestica OX=3750 GN=DVH24_024770 PE=3 SV=1)
HSP 1 Score: 1802.3 bits (4667), Expect = 0.0e+00
Identity = 900/1079 (83.41%), Postives = 980/1079 (90.82%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
ME LWKL YLLEPAP+TL+VTAV VTFGSAFRALNYGKEME+NRD SE SITLDRSQALM
Sbjct: 1 MEPLWKLFYLLEPAPITLVVTAVGVTFGSAFRALNYGKEMEKNRDLSETSITLDRSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSS SLLLMFYLF+SVSQLLT FTAVASVSSLFFC+SPY+A LKSQFGLADPYVSRC
Sbjct: 61 IPVMSSISLLLMFYLFTSVSQLLTVFTAVASVSSLFFCISPYIAYLKSQFGLADPYVSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTRIQ LLLL C G V+AWLVSGHWILNNLLGISICVAFVSHVRLPN+KICAMLLV
Sbjct: 121 CSKSFTRIQALLLLLCIGTVSAWLVSGHWILNNLLGISICVAFVSHVRLPNIKICAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSER FGANVMVSVATQQASNPVHTVANSLSLPGLQ++TKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERIFGANVMVSVATQQASNPVHTVANSLSLPGLQMVTKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMR-ARGHK 300
FPRNL+GG IPG A DFMMLGLGDMAIPAM LALVL FDHR+S+D VNLLDM ++GHK
Sbjct: 241 FPRNLIGGEIPG-GARDFMMLGLGDMAIPAMLLALVLCFDHRRSKDLVNLLDMHSSKGHK 300
Query: 301 YIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLP 360
YIWYALPGYAIGLVTALAAG+LTHSPQPALLYLVPSTLGP++ ISWIRK+ ELW+GPLP
Sbjct: 301 YIWYALPGYAIGLVTALAAGILTHSPQPALLYLVPSTLGPIVFISWIRKELAELWDGPLP 360
Query: 361 NPNDKIVWSFVSMGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPL 420
+ NDK ++VTPLCGVYNENPLSYLVS+DGFN LIDCGWNDHFDP+LLQPL
Sbjct: 361 SMNDK--------AHQIEVTPLCGVYNENPLSYLVSIDGFNLLIDCGWNDHFDPSLLQPL 420
Query: 421 SRVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQV 480
SRVAST+DAVL+SHPDTLHLGALPYAMKQLGLSAPV+STEPVYRLGLLTMYDQF++RKQV
Sbjct: 421 SRVASTVDAVLLSHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFLSRKQV 480
Query: 481 SEFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGED 540
S+FDLFTLDDIDSAFQ TRLTY+QNHHLSGKGEGIVI+PHV+GHLLGGT+WKITKDGED
Sbjct: 481 SDFDLFTLDDIDSAFQNFTRLTYAQNHHLSGKGEGIVISPHVSGHLLGGTVWKITKDGED 540
Query: 541 VIYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRA 600
VIYAVDFNHRKE+HLNG +FVRPAVLITDAYNALNNQPYRRQKDKEF D I+KTLR+
Sbjct: 541 VIYAVDFNHRKEKHLNGINQSAFVRPAVLITDAYNALNNQPYRRQKDKEFTDAIKKTLRS 600
Query: 601 NGNVLLPVDTAGRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIA 660
+GNVLLPVDTAGRV+EL+QILE W EE+LN+PIFFLTYVASSTIDY+KSFLEWMSD+IA
Sbjct: 601 DGNVLLPVDTAGRVMELVQILESCWTEENLNYPIFFLTYVASSTIDYVKSFLEWMSDAIA 660
Query: 661 KSFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKN 720
KSFE TR N F LK + LL++KSELD+APDGPKVVLASMASLEAG+SHDIFVEWA D KN
Sbjct: 661 KSFEKTRENVFNLKRIRLLVSKSELDDAPDGPKVVLASMASLEAGFSHDIFVEWANDPKN 720
Query: 721 LVLFSERGQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNR-KKEEALKAS 780
LVLF+ER QFG+LARMLQADPPPKAVKVT+SKRVPL G+EL+AYEEEQNR +KEEALKAS
Sbjct: 721 LVLFTERAQFGSLARMLQADPPPKAVKVTISKRVPLVGEELIAYEEEQNRIRKEEALKAS 780
Query: 781 LLKEEQSKASHGTDNDTGDPMIIDAS-SNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPM 840
L+KEE+SKASHG D +T DPMIIDAS ++ PD G G YRDI IDGF PPSTSV+PM
Sbjct: 781 LVKEEESKASHGADVNTSDPMIIDASNTHSLPDAAGPQGSGYRDILIDGFTPPSTSVAPM 840
Query: 841 FPFYENTSAWDDFGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKV 900
FPFYEN++ WDDFGEVINPDDYVIKDEDMD A H G D+DGKLDE +A+LILD +PSKV
Sbjct: 841 FPFYENSTEWDDFGEVINPDDYVIKDEDMDHGAMHVGGDMDGKLDEGSASLILDTRPSKV 900
Query: 901 VSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNV 960
VS ELTVQVKCSL YMDFEGRSD RSIKSILSH+APLKLVLVHGTAEATEH+KQHCLK+V
Sbjct: 901 VSTELTVQVKCSLIYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCLKHV 960
Query: 961 CPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLS 1020
CPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKK+GDYEI+W+D++ GKTEN LS
Sbjct: 961 CPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKVGDYEIAWVDSEAGKTENDMLS 1020
Query: 1021 LLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQK 1077
L PLS PH+SVLVGDLKMA+FKQFLS KG+Q EFAGG LRCGEYVTLRKV DA K
Sbjct: 1021 LQPLSNPPPPHESVLVGDLKMANFKQFLSDKGVQAEFAGGVLRCGEYVTLRKVGDASHK 1070
BLAST of CmaCh16G001180 vs. ExPASy TrEMBL
Match:
A0A5E4E5T2 (Cleavage and polyadenylation specificity factor subunit 2 OS=Prunus dulcis OX=3755 GN=ALMOND_2B028284 PE=3 SV=1)
HSP 1 Score: 1780.0 bits (4609), Expect = 0.0e+00
Identity = 892/1068 (83.52%), Postives = 971/1068 (90.92%), Query Frame = 0
Query: 16 VTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALMIPVMSSCSLLLMFYL 75
VT V AV VTFGSAFRALNYGKEMERNRD SE SITLDRSQALMIPVMSS SLLLMFYL
Sbjct: 71 VTDNVFAVGVTFGSAFRALNYGKEMERNRDLSETSITLDRSQALMIPVMSSISLLLMFYL 130
Query: 76 FSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRCCSKSFTRIQGLLLLA 135
FSSVSQLLT FTA+ASVSSLFFCLSPY+A LKSQFG ADPYVSRCCSKSFTRIQGLLL
Sbjct: 131 FSSVSQLLTVFTAIASVSSLFFCLSPYVAYLKSQFGFADPYVSRCCSKSFTRIQGLLLFL 190
Query: 136 CFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLVCLFVYDIFWVFFSER 195
C G V AWLV+GHW+LNNLLGISIC+AFVSHVRLPN+KICAMLLVCLFVYDIFWVFFSER
Sbjct: 191 CIGTVVAWLVTGHWVLNNLLGISICIAFVSHVRLPNIKICAMLLVCLFVYDIFWVFFSER 250
Query: 196 FFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIVFPRNLLGGVIPGKNA 255
FFGANVMVSVATQQASNPVHTVANSLSLPGLQ++TKKLELPVKIVFPRNLLGG+IPG A
Sbjct: 251 FFGANVMVSVATQQASNPVHTVANSLSLPGLQMVTKKLELPVKIVFPRNLLGGLIPG-GA 310
Query: 256 TDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMR-ARGHKYIWYALPGYAIGLVT 315
DFMMLGLGDMAIPAM LALVL FDHR+SRD++NLL+M ++GHKYIWYALPGYAIGLVT
Sbjct: 311 KDFMMLGLGDMAIPAMLLALVLCFDHRRSRDSINLLEMHSSKGHKYIWYALPGYAIGLVT 370
Query: 316 ALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLPNPNDKIVW----SFV 375
ALAAGVLTHSPQPALLYLVPSTLGP++ ISWIRK+ ELW+GPLPN NDK +
Sbjct: 371 ALAAGVLTHSPQPALLYLVPSTLGPIVFISWIRKELAELWDGPLPNSNDKAHQIERVTQK 430
Query: 376 SMGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVL 435
MGTSVQVTPLCGVYNENPLSYLVS+DGFNFLIDCGWNDHFDP+LL+PLSRVAST+DAVL
Sbjct: 431 KMGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLEPLSRVASTVDAVL 490
Query: 436 ISHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDI 495
+SHPDTLHLGALP+AMKQLGLSA VYSTEPVYRLGLLTMYDQ+++RKQVS+FDLFTLDDI
Sbjct: 491 LSHPDTLHLGALPFAMKQLGLSAVVYSTEPVYRLGLLTMYDQYLSRKQVSDFDLFTLDDI 550
Query: 496 DSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRK 555
DSAFQ VTRLTY+QNHHLSGKGEGIVI+PHV+GHLLGGT+WKITKDGEDVIYAVDFNHRK
Sbjct: 551 DSAFQNVTRLTYAQNHHLSGKGEGIVISPHVSGHLLGGTVWKITKDGEDVIYAVDFNHRK 610
Query: 556 ERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 615
E+HLNG SFVRPAVLITDAYNALNNQ YRRQKDKEF DTI+KTLR++GNVLLPVDTA
Sbjct: 611 EKHLNGINQASFVRPAVLITDAYNALNNQAYRRQKDKEFTDTIKKTLRSDGNVLLPVDTA 670
Query: 616 GRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAF 675
GRVLEL+QILE W +E+LN+PIFFLTYVASSTIDY+KSFLEWMSDSIAKSFE TR NAF
Sbjct: 671 GRVLELVQILESCWADENLNYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEKTRENAF 730
Query: 676 LLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFG 735
+LK +TLL+NKSELDNA DGPKVVLASMASLEAG+SHDIFVEWATD KNLVLF+ER QFG
Sbjct: 731 ILKRITLLVNKSELDNASDGPKVVLASMASLEAGFSHDIFVEWATDPKNLVLFTERAQFG 790
Query: 736 TLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNR-KKEEALKASLLKEEQSKASH 795
TLARMLQADPPPKAVKVT+SKRVPL G+EL+AYEEEQNR +K+E LKASL+KEE+SK++
Sbjct: 791 TLARMLQADPPPKAVKVTMSKRVPLVGEELIAYEEEQNRIRKDEVLKASLIKEEESKSAQ 850
Query: 796 GTDNDTGDPMIIDAS-SNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWD 855
G D T DPM++DAS ++ D HGG YRD+ IDGF PPSTS +PMFPFYEN S WD
Sbjct: 851 GADVSTSDPMVVDASNTHSLLDAAVPHGGGYRDMLIDGFTPPSTSAAPMFPFYENNSDWD 910
Query: 856 DFGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKC 915
DFGEVINPDDYVIKD DMDQ A H G D+DGKLDE +A+LILD +PSKVV+ ELTVQVKC
Sbjct: 911 DFGEVINPDDYVIKDADMDQGAMHVGGDMDGKLDEGSASLILDTRPSKVVATELTVQVKC 970
Query: 916 SLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNVCPHVYAPQIEE 975
SL YMDFEGRSD RSIKSILSH+APLKLVLVHGTAEATEH+KQHCL +VCPHVYAPQIEE
Sbjct: 971 SLIYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCLTHVCPHVYAPQIEE 1030
Query: 976 TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLPLSKAALPH 1035
TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEI+W+D++ GKTENG LSLLP+S A PH
Sbjct: 1031 TIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDSEAGKTENGALSLLPISTPAPPH 1090
Query: 1036 KSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQK 1077
+SVLVGDLKMA+FKQFLS G+QVEFA GALRCGEYVTLRKV DA K
Sbjct: 1091 ESVLVGDLKMANFKQFLSDNGVQVEFASGALRCGEYVTLRKVGDASHK 1137
BLAST of CmaCh16G001180 vs. NCBI nr
Match:
KAG6576721.1 (Cleavage and polyadenylation specificity factor subunit 2, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 2085.1 bits (5401), Expect = 0.0e+00
Identity = 1055/1076 (98.05%), Postives = 1059/1076 (98.42%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM
Sbjct: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCL+PYMACLKSQFGLADPYVSRC
Sbjct: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLAPYMACLKSQFGLADPYVSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTRIQGLLL+ACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV
Sbjct: 121 CSKSFTRIQGLLLMACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMRARGHKY 300
FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVL FDHRKSRDTVNLLDM ARGHKY
Sbjct: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLCFDHRKSRDTVNLLDMHARGHKY 300
Query: 301 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLPN 360
IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLPN
Sbjct: 301 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLPN 360
Query: 361 PNDKIVWSFVSMGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLS 420
PNDK VTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLS
Sbjct: 361 PNDK-------------VTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLS 420
Query: 421 RVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVS 480
RVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVS
Sbjct: 421 RVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVS 480
Query: 481 EFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDV 540
EFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDV
Sbjct: 481 EFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDV 540
Query: 541 IYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRAN 600
IYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRAN
Sbjct: 541 IYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRAN 600
Query: 601 GNVLLPVDTAGRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAK 660
GNVLLPVDTAGRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAK
Sbjct: 601 GNVLLPVDTAGRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAK 660
Query: 661 SFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNL 720
SFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNL
Sbjct: 661 SFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNL 720
Query: 721 VLFSERGQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLL 780
+LFSERGQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLL
Sbjct: 721 ILFSERGQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLL 780
Query: 781 KEEQSKASHGTDNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPF 840
KEEQSKASHGTDNDTGDPMIIDASSNVAPD VGSHGGAYRDIFIDGFVPPSTSVSPMFPF
Sbjct: 781 KEEQSKASHGTDNDTGDPMIIDASSNVAPD-VGSHGGAYRDIFIDGFVPPSTSVSPMFPF 840
Query: 841 YENTSAWDDFGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSN 900
YENTSAWDDFGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSN
Sbjct: 841 YENTSAWDDFGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSN 900
Query: 901 ELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNVCPH 960
ELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEH+KQHCLKNVCPH
Sbjct: 901 ELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPH 960
Query: 961 VYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLP 1020
VYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLP
Sbjct: 961 VYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLP 1020
Query: 1021 LSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQK 1077
LSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDA QK
Sbjct: 1021 LSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDASQK 1062
BLAST of CmaCh16G001180 vs. NCBI nr
Match:
TYK22961.1 (cleavage and polyadenylation specificity factor subunit 2 [Cucumis melo var. makuwa])
HSP 1 Score: 2044.6 bits (5296), Expect = 0.0e+00
Identity = 1041/1142 (91.16%), Postives = 1062/1142 (92.99%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
MESLWKLLYLLEPAP TLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM
Sbjct: 1 MESLWKLLYLLEPAPATLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMA LKSQFGLADPYVSRC
Sbjct: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMAYLKSQFGLADPYVSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTRIQGLLLLAC GLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVK+CAMLLV
Sbjct: 121 CSKSFTRIQGLLLLACSGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKVCAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMRARGHKY 300
FPRNLLGGVIPGK+ATDFMMLGLGDMAIPAMFLALVL FDHRKSRDTVNLLD+ RGHKY
Sbjct: 241 FPRNLLGGVIPGKHATDFMMLGLGDMAIPAMFLALVLCFDHRKSRDTVNLLDIHTRGHKY 300
Query: 301 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLPN 360
IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWE
Sbjct: 301 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEESHTY 360
Query: 361 PNDKI--------------------------------------VWSFVSMGTSVQVTPLC 420
ND + WSF++MGTSVQVTPLC
Sbjct: 361 QNDDVWFDRGKKKKKRKRHRPAIFPNTFFFFLQNEGSSRELQRAWSFIAMGTSVQVTPLC 420
Query: 421 GVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL 480
GVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL
Sbjct: 421 GVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL 480
Query: 481 PYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQVVTRLTY 540
PYAMKQLGLSAPV+STEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQV+TRLTY
Sbjct: 481 PYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQVITRLTY 540
Query: 541 SQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESF 600
SQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESF
Sbjct: 541 SQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESF 600
Query: 601 VRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEW 660
VRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEW
Sbjct: 601 VRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEW 660
Query: 661 YWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFLLKHVTLLINKS 720
YWEEESLN+PIFFLTYVASSTIDYIKSFLEWMSD+IAKSFEHTRNNAFLLKHVTLLINKS
Sbjct: 661 YWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLINKS 720
Query: 721 ELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFGTLARMLQADPPP 780
ELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNLVLFSERGQFGTLARMLQADPPP
Sbjct: 721 ELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGTLARMLQADPPP 780
Query: 781 KAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGTDNDTGDPMIID 840
KAVKVTVSKRVPLTGDEL+AYEEEQNRKKEEALKASLLKEEQSKASHG DNDTGDPMIID
Sbjct: 781 KAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGADNDTGDPMIID 840
Query: 841 ASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFGEVINPDDYVIK 900
ASSN APDV SHGGAYRDI IDGFVPPSTSV+PMFPFYENTSAWDDFGEVINPDDYVIK
Sbjct: 841 ASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFGEVINPDDYVIK 900
Query: 901 DEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGR 960
DEDMDQ+A H G DVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGR
Sbjct: 901 DEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDGR 960
Query: 961 SIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQ 1020
SIKSILSHVAPLKLVLVHGTAEATEH+KQHCLKNVCPHVYAPQ+EETIDVTSDLCAYKVQ
Sbjct: 961 SIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQVEETIDVTSDLCAYKVQ 1020
Query: 1021 LSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADFK 1080
LSEKLMSNVLFKKLGDYEI+WLDA+VGKTENGTLSLLPLSKA PHKSVLVGDLKMADFK
Sbjct: 1021 LSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAPAPHKSVLVGDLKMADFK 1080
Query: 1081 QFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQKLHTTNECIFACDGVVWLVPFSWFASK 1105
QFL+SKGIQVEFAGGALRCGEYVTLRKV+DA QKLH TNE + C FASK
Sbjct: 1081 QFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKLHATNE-MHIC-----------FASK 1130
BLAST of CmaCh16G001180 vs. NCBI nr
Match:
KAA0033663.1 (cleavage and polyadenylation specificity factor subunit 2 [Cucumis melo var. makuwa])
HSP 1 Score: 2040.0 bits (5284), Expect = 0.0e+00
Identity = 1041/1143 (91.08%), Postives = 1062/1143 (92.91%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
MESLWKLLYLLEPAP TLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM
Sbjct: 1 MESLWKLLYLLEPAPATLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMA LKSQFGLADPYVSRC
Sbjct: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMAYLKSQFGLADPYVSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTRIQGLLLLAC GLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVK+CAMLLV
Sbjct: 121 CSKSFTRIQGLLLLACSGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKVCAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMRARGHKY 300
FPRNLLGGVIPGK+ATDFMMLGLGDMAIPAMFLALVL FDHRKSRDTVNLLD+ RGHKY
Sbjct: 241 FPRNLLGGVIPGKHATDFMMLGLGDMAIPAMFLALVLCFDHRKSRDTVNLLDIHTRGHKY 300
Query: 301 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLPN 360
IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWE
Sbjct: 301 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEESHTY 360
Query: 361 PNDKI--------------------------------------VWSFVSMGTSVQVTPLC 420
ND + WSF++MGTSVQVTPLC
Sbjct: 361 QNDDVWFDRGKKKKKRKRHRPAIFPNTFFFFLQNEGSSRELQRAWSFIAMGTSVQVTPLC 420
Query: 421 GVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL 480
GVYNENPLSYLVSVD FNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL
Sbjct: 421 GVYNENPLSYLVSVDDFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLISHPDTLHLGAL 480
Query: 481 PYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQVVTRLTY 540
PYAMKQLGLSAPV+STEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQV+TRLTY
Sbjct: 481 PYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDIDSAFQVITRLTY 540
Query: 541 SQNHHLS-GKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILES 600
SQNHHLS GKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILES
Sbjct: 541 SQNHHLSGGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILES 600
Query: 601 FVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILE 660
FVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILE
Sbjct: 601 FVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILE 660
Query: 661 WYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFLLKHVTLLINK 720
WYWEEESLN+PIFFLTYVASSTIDYIKSFLEWMSD+IAKSFEHTRNNAFLLKHVTLLINK
Sbjct: 661 WYWEEESLNYPIFFLTYVASSTIDYIKSFLEWMSDTIAKSFEHTRNNAFLLKHVTLLINK 720
Query: 721 SELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFGTLARMLQADPP 780
SELDNAPDGPKVVLASMASLEAGYSHDIFV+WA DAKNLVLFSERGQFGTLARMLQADPP
Sbjct: 721 SELDNAPDGPKVVLASMASLEAGYSHDIFVDWAMDAKNLVLFSERGQFGTLARMLQADPP 780
Query: 781 PKAVKVTVSKRVPLTGDELVAYEEEQNRKKEEALKASLLKEEQSKASHGTDNDTGDPMII 840
PKAVKVTVSKRVPLTGDEL+AYEEEQNRKKEEALKASLLKEEQSKASHG DNDTGDPMII
Sbjct: 781 PKAVKVTVSKRVPLTGDELIAYEEEQNRKKEEALKASLLKEEQSKASHGADNDTGDPMII 840
Query: 841 DASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDDFGEVINPDDYVI 900
DASSN APDV SHGGAYRDI IDGFVPPSTSV+PMFPFYENTSAWDDFGEVINPDDYVI
Sbjct: 841 DASSNAAPDVGSSHGGAYRDILIDGFVPPSTSVAPMFPFYENTSAWDDFGEVINPDDYVI 900
Query: 901 KDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDG 960
KDEDMDQ+A H G DVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDG
Sbjct: 901 KDEDMDQAAMHAGGDVDGKLDETAANLILDMKPSKVVSNELTVQVKCSLHYMDFEGRSDG 960
Query: 961 RSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKV 1020
RSIKSILSHVAPLKLVLVHGTAEATEH+KQHCLKNVCPHVYAPQ+EETIDVTSDLCAYKV
Sbjct: 961 RSIKSILSHVAPLKLVLVHGTAEATEHLKQHCLKNVCPHVYAPQVEETIDVTSDLCAYKV 1020
Query: 1021 QLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLPLSKAALPHKSVLVGDLKMADF 1080
QLSEKLMSNVLFKKLGDYEI+WLDA+VGKTENGTLSLLPLSKA PHKSVLVGDLKMADF
Sbjct: 1021 QLSEKLMSNVLFKKLGDYEIAWLDAEVGKTENGTLSLLPLSKAPAPHKSVLVGDLKMADF 1080
Query: 1081 KQFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQKLHTTNECIFACDGVVWLVPFSWFAS 1105
KQFL+SKGIQVEFAGGALRCGEYVTLRKV+DA QKLH TNE + C FAS
Sbjct: 1081 KQFLASKGIQVEFAGGALRCGEYVTLRKVTDASQKLHATNE-MHIC-----------FAS 1131
BLAST of CmaCh16G001180 vs. NCBI nr
Match:
KAB8441742.1 (hypothetical protein FH972_025130 [Carpinus fangiana])
HSP 1 Score: 1811.6 bits (4691), Expect = 0.0e+00
Identity = 910/1080 (84.26%), Postives = 989/1080 (91.57%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
M+ LWKL YLLEPAP+TLIVTAVAVTFGSAFRALNYGKEMERNRD SEASITLDRSQALM
Sbjct: 1 MDPLWKLSYLLEPAPITLIVTAVAVTFGSAFRALNYGKEMERNRDLSEASITLDRSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSSCSLLLMFYLFSSVSQLLTAFTA+ASVSSLFFCLSPY+A +KSQFGL DP+VSRC
Sbjct: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAIASVSSLFFCLSPYVAYMKSQFGLTDPFVSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTR QGLLLL C G+VAAWLVSGHWILNNLLGISIC+AFVSHVRLPN+KICAMLLV
Sbjct: 121 CSKSFTRTQGLLLLTCSGIVAAWLVSGHWILNNLLGISICIAFVSHVRLPNIKICAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMR-ARGHK 300
FPRNLLGGV+PG++A DFMMLGLGDMAIP+M LALVL FDHRKSRD+VNL+D+ A+GHK
Sbjct: 241 FPRNLLGGVVPGESARDFMMLGLGDMAIPSMLLALVLCFDHRKSRDSVNLIDINSAKGHK 300
Query: 301 YIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLP 360
YIWYAL GYAIGLVTALAAGVLTHSPQPALLYLVPSTLGP+I +S+IRK+ +ELWEG +P
Sbjct: 301 YIWYALTGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPIIVVSYIRKELMELWEGNIP 360
Query: 361 NPNDKIVWSFVSMGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPL 420
N NDK +VTPLCGVYNENPLSY+VS+DGFNFLIDCGW+DHFDP +LQPL
Sbjct: 361 NLNDK--------AHQTEVTPLCGVYNENPLSYVVSIDGFNFLIDCGWHDHFDPTILQPL 420
Query: 421 SRVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQV 480
S+VASTIDAVL+S+PDTLHLGALPYA+KQLGLSAPVY+TEP+YRLGLLTMYDQ+++RKQV
Sbjct: 421 SKVASTIDAVLLSYPDTLHLGALPYAVKQLGLSAPVYTTEPIYRLGLLTMYDQYLSRKQV 480
Query: 481 SEFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGED 540
SEFDLFTLDDIDSAFQ VTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGT+WKITKDGED
Sbjct: 481 SEFDLFTLDDIDSAFQKVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGED 540
Query: 541 VIYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRR-QKDKEFGDTIQKTLR 600
VIYAVD NHRKERHLNGT+L SFVRPAVLITDAYNALNNQPYRR +K+ EFG+TI+KTL
Sbjct: 541 VIYAVDLNHRKERHLNGTVLASFVRPAVLITDAYNALNNQPYRRGEKENEFGETIKKTLG 600
Query: 601 ANGNVLLPVDTAGRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSI 660
A GNVLLPVDTAGRV ELI ILE YW ++SLN+PIFFLTYVASSTIDY+KSFLEWMSDSI
Sbjct: 601 AGGNVLLPVDTAGRVFELILILEQYWADKSLNYPIFFLTYVASSTIDYVKSFLEWMSDSI 660
Query: 661 AKSFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAK 720
KSFE R N FLLK+VT LINKSELDNAPDGPKVV+ASMASLE G+SHDIFVEWA+DAK
Sbjct: 661 PKSFEQNRENPFLLKNVTFLINKSELDNAPDGPKVVIASMASLEVGFSHDIFVEWASDAK 720
Query: 721 NLVLFSERGQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNR-KKEEALKA 780
NLVLF+ERGQF TLAR+LQADPPPKAVKV +SKRVPL G+EL+AYEEEQNR KKEE LKA
Sbjct: 721 NLVLFTERGQFATLARILQADPPPKAVKVAMSKRVPLVGEELIAYEEEQNRIKKEETLKA 780
Query: 781 SLLKEEQSKASHGTDNDTGDPMIIDASSNVA-PDVVGSHGGAYRDIFIDGFVPPSTSVSP 840
+L+KEE +KASH D D DPM++D S+ A PDV G HGG YRDI IDGFVP STSV+P
Sbjct: 781 TLIKEE-TKASHDADIDASDPMVVDVSNTHALPDVAGPHGGGYRDILIDGFVPSSTSVAP 840
Query: 841 MFPFYENTSAWDDFGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSK 900
MFPFY+NT WDDFGEVINPDDYVIKDEDMDQ+ + G DGK DE +A++ILD KPSK
Sbjct: 841 MFPFYDNTFEWDDFGEVINPDDYVIKDEDMDQTGMNVGGYSDGKFDEGSASMILDTKPSK 900
Query: 901 VVSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKN 960
VVSNELTVQVKC L YMDFEGRSDGRSIKSILSHVAPLKLVLVHG+AEATEH+KQHCLK+
Sbjct: 901 VVSNELTVQVKCLLIYMDFEGRSDGRSIKSILSHVAPLKLVLVHGSAEATEHLKQHCLKH 960
Query: 961 VCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTL 1020
VCP VYAP IEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEI+W+DA+VGKT++G L
Sbjct: 961 VCPQVYAPHIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEIAWVDAEVGKTDDGML 1020
Query: 1021 SLLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQK 1077
SL P S AA PHKSVLVGDLKMADFKQFL+SKGIQVEFAGGALRCGEYVT+RKV DA QK
Sbjct: 1021 SLNPCSTAAPPHKSVLVGDLKMADFKQFLASKGIQVEFAGGALRCGEYVTIRKVGDASQK 1071
BLAST of CmaCh16G001180 vs. NCBI nr
Match:
RXH95086.1 (hypothetical protein DVH24_024770 [Malus domestica])
HSP 1 Score: 1802.3 bits (4667), Expect = 0.0e+00
Identity = 900/1079 (83.41%), Postives = 980/1079 (90.82%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
ME LWKL YLLEPAP+TL+VTAV VTFGSAFRALNYGKEME+NRD SE SITLDRSQALM
Sbjct: 1 MEPLWKLFYLLEPAPITLVVTAVGVTFGSAFRALNYGKEMEKNRDLSETSITLDRSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSS SLLLMFYLF+SVSQLLT FTAVASVSSLFFC+SPY+A LKSQFGLADPYVSRC
Sbjct: 61 IPVMSSISLLLMFYLFTSVSQLLTVFTAVASVSSLFFCISPYIAYLKSQFGLADPYVSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTRIQ LLLL C G V+AWLVSGHWILNNLLGISICVAFVSHVRLPN+KICAMLLV
Sbjct: 121 CSKSFTRIQALLLLLCIGTVSAWLVSGHWILNNLLGISICVAFVSHVRLPNIKICAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSER FGANVMVSVATQQASNPVHTVANSLSLPGLQ++TKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERIFGANVMVSVATQQASNPVHTVANSLSLPGLQMVTKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMR-ARGHK 300
FPRNL+GG IPG A DFMMLGLGDMAIPAM LALVL FDHR+S+D VNLLDM ++GHK
Sbjct: 241 FPRNLIGGEIPG-GARDFMMLGLGDMAIPAMLLALVLCFDHRRSKDLVNLLDMHSSKGHK 300
Query: 301 YIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGPLP 360
YIWYALPGYAIGLVTALAAG+LTHSPQPALLYLVPSTLGP++ ISWIRK+ ELW+GPLP
Sbjct: 301 YIWYALPGYAIGLVTALAAGILTHSPQPALLYLVPSTLGPIVFISWIRKELAELWDGPLP 360
Query: 361 NPNDKIVWSFVSMGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPL 420
+ NDK ++VTPLCGVYNENPLSYLVS+DGFN LIDCGWNDHFDP+LLQPL
Sbjct: 361 SMNDK--------AHQIEVTPLCGVYNENPLSYLVSIDGFNLLIDCGWNDHFDPSLLQPL 420
Query: 421 SRVASTIDAVLISHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQV 480
SRVAST+DAVL+SHPDTLHLGALPYAMKQLGLSAPV+STEPVYRLGLLTMYDQF++RKQV
Sbjct: 421 SRVASTVDAVLLSHPDTLHLGALPYAMKQLGLSAPVFSTEPVYRLGLLTMYDQFLSRKQV 480
Query: 481 SEFDLFTLDDIDSAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGED 540
S+FDLFTLDDIDSAFQ TRLTY+QNHHLSGKGEGIVI+PHV+GHLLGGT+WKITKDGED
Sbjct: 481 SDFDLFTLDDIDSAFQNFTRLTYAQNHHLSGKGEGIVISPHVSGHLLGGTVWKITKDGED 540
Query: 541 VIYAVDFNHRKERHLNGTILESFVRPAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRA 600
VIYAVDFNHRKE+HLNG +FVRPAVLITDAYNALNNQPYRRQKDKEF D I+KTLR+
Sbjct: 541 VIYAVDFNHRKEKHLNGINQSAFVRPAVLITDAYNALNNQPYRRQKDKEFTDAIKKTLRS 600
Query: 601 NGNVLLPVDTAGRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIA 660
+GNVLLPVDTAGRV+EL+QILE W EE+LN+PIFFLTYVASSTIDY+KSFLEWMSD+IA
Sbjct: 601 DGNVLLPVDTAGRVMELVQILESCWTEENLNYPIFFLTYVASSTIDYVKSFLEWMSDAIA 660
Query: 661 KSFEHTRNNAFLLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKN 720
KSFE TR N F LK + LL++KSELD+APDGPKVVLASMASLEAG+SHDIFVEWA D KN
Sbjct: 661 KSFEKTRENVFNLKRIRLLVSKSELDDAPDGPKVVLASMASLEAGFSHDIFVEWANDPKN 720
Query: 721 LVLFSERGQFGTLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNR-KKEEALKAS 780
LVLF+ER QFG+LARMLQADPPPKAVKVT+SKRVPL G+EL+AYEEEQNR +KEEALKAS
Sbjct: 721 LVLFTERAQFGSLARMLQADPPPKAVKVTISKRVPLVGEELIAYEEEQNRIRKEEALKAS 780
Query: 781 LLKEEQSKASHGTDNDTGDPMIIDAS-SNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPM 840
L+KEE+SKASHG D +T DPMIIDAS ++ PD G G YRDI IDGF PPSTSV+PM
Sbjct: 781 LVKEEESKASHGADVNTSDPMIIDASNTHSLPDAAGPQGSGYRDILIDGFTPPSTSVAPM 840
Query: 841 FPFYENTSAWDDFGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKV 900
FPFYEN++ WDDFGEVINPDDYVIKDEDMD A H G D+DGKLDE +A+LILD +PSKV
Sbjct: 841 FPFYENSTEWDDFGEVINPDDYVIKDEDMDHGAMHVGGDMDGKLDEGSASLILDTRPSKV 900
Query: 901 VSNELTVQVKCSLHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNV 960
VS ELTVQVKCSL YMDFEGRSD RSIKSILSH+APLKLVLVHGTAEATEH+KQHCLK+V
Sbjct: 901 VSTELTVQVKCSLIYMDFEGRSDARSIKSILSHMAPLKLVLVHGTAEATEHLKQHCLKHV 960
Query: 961 CPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLS 1020
CPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKK+GDYEI+W+D++ GKTEN LS
Sbjct: 961 CPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKVGDYEIAWVDSEAGKTENDMLS 1020
Query: 1021 LLPLSKAALPHKSVLVGDLKMADFKQFLSSKGIQVEFAGGALRCGEYVTLRKVSDARQK 1077
L PLS PH+SVLVGDLKMA+FKQFLS KG+Q EFAGG LRCGEYVTLRKV DA K
Sbjct: 1021 LQPLSNPPPPHESVLVGDLKMANFKQFLSDKGVQAEFAGGVLRCGEYVTLRKVGDASHK 1070
BLAST of CmaCh16G001180 vs. TAIR 10
Match:
AT5G23880.1 (cleavage and polyadenylation specificity factor 100 )
HSP 1 Score: 1137.9 bits (2942), Expect = 0.0e+00
Identity = 555/708 (78.39%), Postives = 639/708 (90.25%), Query Frame = 0
Query: 372 MGTSVQVTPLCGVYNENPLSYLVSVDGFNFLIDCGWNDHFDPALLQPLSRVASTIDAVLI 431
MGTSVQVTPLCGVYNENPLSYLVS+DGFNFLIDCGWND FD +LL+PLSRVASTIDAVL+
Sbjct: 1 MGTSVQVTPLCGVYNENPLSYLVSIDGFNFLIDCGWNDLFDTSLLEPLSRVASTIDAVLL 60
Query: 432 SHPDTLHLGALPYAMKQLGLSAPVYSTEPVYRLGLLTMYDQFIARKQVSEFDLFTLDDID 491
SHPDTLH+GALPYAMKQLGLSAPVY+TEPV+RLGLLTMYDQF++RKQVS+FDLFTLDDID
Sbjct: 61 SHPDTLHIGALPYAMKQLGLSAPVYATEPVHRLGLLTMYDQFLSRKQVSDFDLFTLDDID 120
Query: 492 SAFQVVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKE 551
SAFQ V RLTYSQN+HLSGKGEGIVIAPHVAGH+LGG++W+ITKDGEDVIYAVD+NHRKE
Sbjct: 121 SAFQNVIRLTYSQNYHLSGKGEGIVIAPHVAGHMLGGSIWRITKDGEDVIYAVDYNHRKE 180
Query: 552 RHLNGTILESFVRPAVLITDAYNAL-NNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTA 611
RHLNGT+L+SFVRPAVLITDAY+AL NQ R+Q+DKEF DTI K L GNVLLPVDTA
Sbjct: 181 RHLNGTVLQSFVRPAVLITDAYHALYTNQTARQQRDKEFLDTISKHLEVGGNVLLPVDTA 240
Query: 612 GRVLELIQILEWYWEEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAF 671
GRVLEL+ ILE +W + +FPI+FLTYV+SSTIDY+KSFLEWMSDSI+KSFE +R+NAF
Sbjct: 241 GRVLELLLILEQHWSQRGFSFPIYFLTYVSSSTIDYVKSFLEWMSDSISKSFETSRDNAF 300
Query: 672 LLKHVTLLINKSELDNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFG 731
LL+HVTLLINK++LDNAP GPKVVLASMASLEAG++ +IFVEWA D +NLVLF+E GQFG
Sbjct: 301 LLRHVTLLINKTDLDNAPPGPKVVLASMASLEAGFAREIFVEWANDPRNLVLFTETGQFG 360
Query: 732 TLARMLQADPPPKAVKVTVSKRVPLTGDELVAYEEEQNR-KKEEALKASLLKEEQSKASH 791
TLARMLQ+ PPPK VKVT+SKRVPL G+EL+AYEEEQNR K+EEAL+ASL+KEE++KASH
Sbjct: 361 TLARMLQSAPPPKFVKVTMSKRVPLAGEELIAYEEEQNRLKREEALRASLVKEEETKASH 420
Query: 792 GTDNDTGDPMIIDASSNVAPDVVGSHGGAYRDIFIDGFVPPSTSVSPMFPFYENTSAWDD 851
G+D+++ +PMIID + DV+GSHG AY+DI IDGFVPPS+SV+PMFP+Y+NTS WDD
Sbjct: 421 GSDDNSSEPMIID--TKTTHDVIGSHGPAYKDILIDGFVPPSSSVAPMFPYYDNTSEWDD 480
Query: 852 FGEVINPDDYVIKDEDMDQSAPHGGVDVDGKLDETAANLILDMKPSKVVSNELTVQVKCS 911
FGE+INPDDYVIKDEDMD+ A H G DVDG+LDE A+L+LD +PSKV+SNEL V V CS
Sbjct: 481 FGEIINPDDYVIKDEDMDRGAMHNGGDVDGRLDEATASLMLDTRPSKVMSNELIVTVSCS 540
Query: 912 LHYMDFEGRSDGRSIKSILSHVAPLKLVLVHGTAEATEHIKQHCLKNVCPHVYAPQIEET 971
L MD+EGRSDGRSIKS+++HV+PLKLVLVH AEATEH+KQHCL N+CPHVYAPQIEET
Sbjct: 541 LVKMDYEGRSDGRSIKSMIAHVSPLKLVLVHAIAEATEHLKQHCLNNICPHVYAPQIEET 600
Query: 972 IDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEISWLDADVGKTENGTLSLLPLSKAALPHK 1031
+DVTSDLCAYKVQLSEKLMSNV+FKKLGD E++W+D++VGKTE SLLP+ AA PHK
Sbjct: 601 VDVTSDLCAYKVQLSEKLMSNVIFKKLGDSEVAWVDSEVGKTERDMRSLLPMPGAASPHK 660
Query: 1032 SVLVGDLKMADFKQFLSSKGIQVEFA-GGALRCGEYVTLRKVSDARQK 1077
VLVGDLK+ADFKQFLSSKG+QVEFA GGALRCGEYVTLRKV QK
Sbjct: 661 PVLVGDLKIADFKQFLSSKGVQVEFAGGGALRCGEYVTLRKVGPTGQK 706
BLAST of CmaCh16G001180 vs. TAIR 10
Match:
AT4G33410.1 (SIGNAL PEPTIDE PEPTIDASE-LIKE 1 )
HSP 1 Score: 610.9 bits (1574), Expect = 2.3e-174
Identity = 312/366 (85.25%), Postives = 338/366 (92.35%), Query Frame = 0
Query: 1 MESLWKLLYLLEPAPVTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALM 60
ME+LW LLYLLEPAP TLIVTAV VTF SAFRALNYGKEMERNRDFSEASITLD SQALM
Sbjct: 1 METLWTLLYLLEPAPATLIVTAVTVTFASAFRALNYGKEMERNRDFSEASITLDSSQALM 60
Query: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPYVSRC 120
IPVMSSCSLLLMFYLFSSVSQLLTAFTA+ASVSSLF+ LSPY +K+Q GL+DP++SRC
Sbjct: 61 IPVMSSCSLLLMFYLFSSVSQLLTAFTAIASVSSLFYWLSPYAVYMKTQLGLSDPFLSRC 120
Query: 121 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 180
CSKSFTRIQGLLL+AC V AWL+SGHW+LNNLLGISIC+AFVSHVRLPN+KICAMLLV
Sbjct: 121 CSKSFTRIQGLLLVACAMTVVAWLISGHWVLNNLLGISICIAFVSHVRLPNIKICAMLLV 180
Query: 181 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 240
CLFVYDIFWVFFSERFFGANVMV+VATQQASNPVHTVANSL+LPGLQLITKKLELPVKIV
Sbjct: 181 CLFVYDIFWVFFSERFFGANVMVAVATQQASNPVHTVANSLNLPGLQLITKKLELPVKIV 240
Query: 241 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMR-ARGHK 300
FPRNLLGGV+PG +A+DFMMLGLGDMAIPAM LALVL FDHRK+RD VN+ D++ ++GHK
Sbjct: 241 FPRNLLGGVVPGVSASDFMMLGLGDMAIPAMLLALVLCFDHRKTRDVVNIFDLKSSKGHK 300
Query: 301 YIWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLGPVIAISWIRKDFLELWEGP-L 360
YIWYALPGYAIGLV ALAAGVLTHSPQPALLYLVPSTLGPVI +SW RKD ELWEGP L
Sbjct: 301 YIWYALPGYAIGLVAALAAGVLTHSPQPALLYLVPSTLGPVIFMSWRRKDLAELWEGPAL 360
Query: 361 PNPNDK 365
NP +K
Sbjct: 361 SNPIEK 366
BLAST of CmaCh16G001180 vs. TAIR 10
Match:
AT2G01730.1 (cleavage and polyadenylation specificity factor 73 kDa subunit-II )
HSP 1 Score: 138.7 bits (348), Expect = 3.3e-32
Identity = 94/357 (26.33%), Postives = 166/357 (46.50%), Query Frame = 0
Query: 393 LVSVDGFNFLIDCGW-------NDHFDPALLQPLSRVASTIDAVLISHPDTLHLGALPYA 452
+V+++G + DCG N + + +L+ + I ++I+H H+GALPY
Sbjct: 20 VVTINGKKIMFDCGMHMGCDDHNRYPNFSLISKSGDFDNAISCIIITHFHMDHVGALPYF 79
Query: 453 MKQLGLSAPVYSTEPVYRLGLLTMYD-QFIARKQVSEFDLFTLDDIDSAFQVVTRLTYSQ 512
+ G + P+Y + P L L + D + + + E +LFT I + + V + Q
Sbjct: 80 TEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELFTTTHIANCMKKVIAIDLKQ 139
Query: 513 NHHLSGKGEGIVIAPHVAGHLLGGTLWKITKDGEDVIYAVDFNHRKERHLNGTILESFVR 572
+ E + I + AGH+LG + ++Y D+N +RHL ++ ++
Sbjct: 140 TIQVD---EDLQIRAYYAGHVLGAVMVYAKMGDAAIVYTGDYNMTTDRHLGAAKIDR-LQ 199
Query: 573 PAVLITDAYNALNNQPYRRQKDKEFGDTIQKTLRANGNVLLPVDTAGRVLELIQILEWYW 632
+LI+++ A + + +++EF + K + G L+P GR EL +L+ YW
Sbjct: 200 LDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFALGRAQELCMLLDDYW 259
Query: 633 EEESLNFPIFFLTYVASSTIDYIKSFLEWMSDSIAKSFEHTRNNAFLLKHVTLLINKSEL 692
E ++ PI+F + + Y K + W S ++ + +H +N F K+V L
Sbjct: 260 ERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKE--KHNTHNPFDFKNVKDF--DRSL 319
Query: 693 DNAPDGPKVVLASMASLEAGYSHDIFVEWATDAKNLVLFSERGQFGTLARMLQADPP 742
+AP GP V+ A+ L AG+S ++F WA NLV GT+ L A P
Sbjct: 320 IHAP-GPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGHKLMAGKP 367
BLAST of CmaCh16G001180 vs. TAIR 10
Match:
AT2G43070.1 (SIGNAL PEPTIDE PEPTIDASE-LIKE 3 )
HSP 1 Score: 99.4 bits (246), Expect = 2.2e-20
Identity = 90/321 (28.04%), Postives = 145/321 (45.17%), Query Frame = 0
Query: 42 RNRDFSEASITLDRSQALMIPVMSSCSLLLMFYLFSS-VSQLLTAFTAVASVSSLFFCLS 101
R D + + + + A+ V +S LLL+FY SS +LT F + + + +
Sbjct: 240 RKDDPEKEILDISVTGAVFFIVTASIFLLLLFYFMSSWFVWVLTIFFCIGGMQGMHNIIM 299
Query: 102 PYMACLKSQFGLADPYVSRCCSKSFTRIQGLLLLACFGLVAAWLVSGH----WILNNLLG 161
+ L+ LA V + + + L+ + C W + H W+ ++LG
Sbjct: 300 AVI--LRKCRHLARKSVKLPLLGTMSVLSLLVNIVCLAFAVFWFIKRHTSYSWVGQDILG 359
Query: 162 ISICVAFVSHVRLPNVKICAMLLVCLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHT 221
I + + + VRLPN+K+ +LL C FVYDIFWVF S F +VM+ VA +S
Sbjct: 360 ICLMITALQVVRLPNIKVATVLLCCAFVYDIFWVFISPLIFHESVMIVVAQGDSSTGE-- 419
Query: 222 VANSLSLPGLQLITKKLELPVKIVFPR--NLLGGVIPGKNATDFMMLGLGDMAIPAMFLA 281
+P+ + PR + GG + M+G GD+ P + ++
Sbjct: 420 -----------------SIPMLLRIPRFFDPWGG---------YDMIGFGDILFPGLLIS 479
Query: 282 LVLSFDHRKSRDTVNLLDMRARGHKYIWYALPGYAIG-LVTALAAGVLTHSPQPALLYLV 341
+D K R N G+ ++W + GY IG L+T L ++ QPALLY+V
Sbjct: 480 FASRYDKIKKRVISN-------GY-FLWLTI-GYGIGLLLTYLGLYLMDGHGQPALLYIV 521
Query: 342 PSTLGPVIAISWIRKDFLELW 355
P TLG + + +R + ELW
Sbjct: 540 PCTLGLAVILGLVRGELKELW 521
BLAST of CmaCh16G001180 vs. TAIR 10
Match:
AT2G03120.1 (signal peptide peptidase )
HSP 1 Score: 97.4 bits (241), Expect = 8.4e-20
Identity = 95/338 (28.11%), Postives = 147/338 (43.49%), Query Frame = 0
Query: 16 VTLIVTAVAVTFGSAFRALNYGKEMERNRDFSEASITLDRSQALMIPVMSSCSLLLMFYL 75
+ +I+TA + FR++ E T+ + A+ P++ S LL +F L
Sbjct: 28 LNVILTACITVYVGCFRSVKDTPPTE----------TMSKEHAMRFPLVGSAMLLSLFLL 87
Query: 76 FSSVSQ-----LLTAFTAVASVSSLFFCLSPYMACLKSQFGLADPY----------VSRC 135
F +S+ +LTA+ V + +L L P + L +P+ +
Sbjct: 88 FKFLSKDLVNAVLTAYFFVLGIVALSATLLPAIRRF-----LPNPWNDNLIVWRFPYFKS 147
Query: 136 CSKSFTRIQGLLLLACFGLVAAWLVSGHWILNNLLGISICVAFVSHVRLPNVKICAMLLV 195
FT+ Q + + A + HW+ NN+LG+S C+ + + L + K A+LL
Sbjct: 148 LEVEFTKSQVVAGIPGTFFCAWYAWKKHWLANNILGLSFCIQGIEMLSLGSFKTGAILLA 207
Query: 196 CLFVYDIFWVFFSERFFGANVMVSVATQQASNPVHTVANSLSLPGLQLITKKLELPVKIV 255
LF YDIFWVFF+ VMVSVA K + P+K++
Sbjct: 208 GLFFYDIFWVFFTP------VMVSVA------------------------KSFDAPIKLL 267
Query: 256 FPRNLLGGVIPGKNATDFMMLGLGDMAIPAMFLALVLSFDHRKSRDTVNLLDMRARGHKY 315
FP G + MLGLGD+ IP +F+AL L FD R R +Y
Sbjct: 268 FP--------TGDALRPYSMLGLGDIVIPGIFVALALRFD-----------VSRRRQPQY 301
Query: 316 IWYALPGYAIGLVTALAAGVLTHSPQPALLYLVPSTLG 339
A GYA+G++ + + QPALLY+VP+ +G
Sbjct: 328 FTSAFIGYAVGVILTIVVMNWFQAAQPALLYIVPAVIG 301
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LKF9 | 0.0e+00 | 78.39 | Cleavage and polyadenylation specificity factor subunit 2 OS=Arabidopsis thalian... | [more] |
Q652P4 | 1.0e-304 | 72.59 | Cleavage and polyadenylation specificity factor subunit 2 OS=Oryza sativa subsp.... | [more] |
Q93Z32 | 3.2e-173 | 85.25 | Signal peptide peptidase-like 1 OS=Arabidopsis thaliana OX=3702 GN=SPPL1 PE=2 SV... | [more] |
Q7G7C7 | 1.9e-154 | 75.62 | Signal peptide peptidase-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPPL... | [more] |
Q9V3D6 | 6.7e-147 | 38.70 | Probable cleavage and polyadenylation specificity factor subunit 2 OS=Drosophila... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DH28 | 0.0e+00 | 91.16 | Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis melo var. m... | [more] |
A0A5A7ST61 | 0.0e+00 | 91.08 | Cleavage and polyadenylation specificity factor subunit 2 OS=Cucumis melo var. m... | [more] |
A0A5N6L0H3 | 0.0e+00 | 84.26 | Cleavage and polyadenylation specificity factor subunit 2 OS=Carpinus fangiana O... | [more] |
A0A498JJ41 | 0.0e+00 | 83.41 | Cleavage and polyadenylation specificity factor subunit 2 OS=Malus domestica OX=... | [more] |
A0A5E4E5T2 | 0.0e+00 | 83.52 | Cleavage and polyadenylation specificity factor subunit 2 OS=Prunus dulcis OX=37... | [more] |
Match Name | E-value | Identity | Description | |
KAG6576721.1 | 0.0e+00 | 98.05 | Cleavage and polyadenylation specificity factor subunit 2, partial [Cucurbita ar... | [more] |
TYK22961.1 | 0.0e+00 | 91.16 | cleavage and polyadenylation specificity factor subunit 2 [Cucumis melo var. mak... | [more] |
KAA0033663.1 | 0.0e+00 | 91.08 | cleavage and polyadenylation specificity factor subunit 2 [Cucumis melo var. mak... | [more] |
KAB8441742.1 | 0.0e+00 | 84.26 | hypothetical protein FH972_025130 [Carpinus fangiana] | [more] |
RXH95086.1 | 0.0e+00 | 83.41 | hypothetical protein DVH24_024770 [Malus domestica] | [more] |