CmaCh15G009530 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGAGGTGAAAAGGATAGAGAGAACAACAATCATGGCGGCCCCTCTTCCTCTCTCTAAGTTTTGCCGCTTAACTTATATGCGAAAATTTCTAGCAATATAACGCACGCACGCGAAGTGTTTGAGGAAATGACAAGCTGAGAAACATGGCCACAAACCCATTTTCATAGCTTCATTTTCTTCTTCTCTTGATGCCACAAAGCTTGGAATACATTCATCCATGTGTCACACCCACCCATTTTACCTTCTTCCCGAAATCTTCGGCTAATTTCCTTCAGAAACATCGGAGGGGGAAAACAGGGGTCACCAGCTTTCTTTGCTTCAACAAGATTCCATCCCCTCCTTGTAAGTTTCTTCCTCTTTTCTTTCCTTTCTTTATTGGTTTCCCTTTTGTTATATTCCTGTTTCCTGTTTTTGATTCTTTTGTGTTTCTTCTTACCTTTTCTGTTTTGGGTGTTTTTCTTTTTTCCCTTGTCTTCTTTCTTTCATTCAACCCTTTTCTTGTTCTAAAGTTTTGCCTATGTTTCTTTCCTGGGTTTCTGTTAGGAAGGTTATTGGTGGTTGGTGGGGTTTTCAACTAACATATAGCCATGGGTATCCCCTGTAGTCTTTGTTTGTTGTAGCCGGTACTCTCATTTATCTACTTTTTTCATTGCCTCCACATCTTATATAATCTTTACACTTGTAATCTACAACATAAACCCATTCACTGGAAAGAACTAAGCCTTGATTTCTTGTATCTATATGGTATTTGGTCAGTTTAAAGATTGTAAAATCTCTTTTTCCTGATATGGGGGATCACTTTGTTTTGCTGGTTGATCGATTGTTGACGGAGACGACATTAGAAGCAGCGATTGAGAGCCAAAAGCATGCCATGGATGGTTTGAAGGGGGACAGTTCTTGCCCAGAAATGGAGTTTGACAATATACCATTTCCAAAGAAAATTGTGGAATGTAGAATATGCCAGGATGAAGATGAAGACTCGAACATGGAAACACCTTGCTCGTGCTGTGGCAGCCTTAAGGTTTGTTGATGAACTCATTGAATTAAATTGGCCAAATTTCCATATTAAGTCATTGCATGCCAAGTATAGCTGATCTTGTTCTTGTCTAGCATTTTATTGCAAATATGAAGCCTAGTGATAAACTCCTTTGCACTTTTGGAAAGCTAGCACATTGATATCTGCCGTAGTTGTCATTCTAATGCAGTTCACACCTCAAACACAACCCATGTTGTCAAACTGAGCTGCTCTTGATTTCTGTATCAATTATATATCTCCTTTCAACGTGTAGTGCCTCAAGAGTTTAATCATTTAGTATGCCAGCGCTTCTGATATGATAATGCAAGTTTTCTTGACATGTTCCGTTGAATTTTGCAGTATGCACATCGAAGATGCATACAGAAGTGGTGTAACGAAAAGGGTGATACAATTTGTGAGATATGCCGCCAGGTGGAGTATGGTGTTTTTTATTTCTTTCCTCCTTAAAATCATAATAGTAAAACAAATTGAAGCAGTTCATTGACGCAAGATTACAATCTCTAGCATGATTGTCTTTTTTGGCCCGAGAAGATCATTATGTTTAATGCAGTTTGTACACCTAAACTGAACCGTGTAACTATGATTTGCAGCAATTCAAACCAGGTTACACAGCATCTCCTCCATTATTCGAAATGGGGCGTATTCCAATGAGCTTCAGGTAATGCTCGTACAACAATGCATACAATGTATGTTCTTTCTGCTTCAACTTGAGAATGATTGACCCCTATTCCATTGCAGGGGGAACTGGGAGATTTCTAGAAGGAACTTGGATAGTTCTAGCTATATAGCAATGGTTTCTTCAAACCGTAATGTTGTTGATACCGAATATGATGAGTTCTCAGCTTCTGCTGCAACCAGCGTGCTATGCTTCCATTCCTTTGCTATTGTTGTAAGTTTTCTTTCTCCCTTGACACATGAAGTTCTTTCCAAACGCACAATTTTTGTAATGGTGATCATAAGATGTTTTCGAAATAACACGTGTTTAAGTTCGTGTTAGGGGAATATCAAAATCTGAACCACATGTTTCTCTTTTTCTTTGTAGTTCATGGTTCTTCTGGTTTTGAGGCACACTCTTCCCCTCATATTCAATGAAAGCGGTGGTTACTCTTTCCCTCTACTTCTGGTGAGAAATCTCTACTTTCAAACAAATGCAAAACCAAGATTTGTGCACGAAGTTAAATTATTCCCTTTCAATGACAGTCGATTTGCCTGCGAAGTTTACTGATCGTTCTACCAATATACGTTATGTTGAAAGTAGTCTCTGCAGTTCATCGTCGTCGACTTCTCGTAAGTGTTCGTATACAATTAACAGACATTTTCATGCCATCCTCTCAGTGATAACTCTATTGTATTAATGGTTTCTTGTGTTTGGATGATTATGATCAGCTGGCTACATCTTCTAGTTCATCCATTCATTCAACCAGCAGCATAGTTAGGAGTTCGACATCCGTATCGTCCCAACCTCAGCCTTACATTATCCGCGTTCGGTCAGTTTCATAGCAGCAGAAGGTCTGAGAAATTGGATTGCGAGCTGAAGAATGGTGTTGGTATGGGGGGATACGTGGCTGTAGCTGTATGTAGCCTTTGGCAGGTTGAAGTAA TGAGGTGAAAAGGATAGAGAGAACAACAATCATGGCGGCCCCTCTTCCTCTCTCTAAGTTTTGCCGCTTAACTTATATGCGAAAATTTCTAGCAATATAACGCACGCACGCGAAGTGTTTGAGGAAATGACAAGCTGAGAAACATGGCCACAAACCCATTTTCATAGCTTCATTTTCTTCTTCTCTTGATGCCACAAAGCTTGGAATACATTCATCCATGTGTCACACCCACCCATTTTACCTTCTTCCCGAAATCTTCGGCTAATTTCCTTCAGAAACATCGGAGGGGGAAAACAGGGGTCACCAGCTTTCTTTGCTTCAACAAGATTCCATCCCCTCCTTGTAAGTTTCTTCCTCTTTTCTTTCCTTTCTTTATTGGTTTCCCTTTTGTTATATTCCTGTTTCCTGTTTTTGATTCTTTTGTGTTTCTTCTTACCTTTTCTGTTTTGGGTGTTTTTCTTTTTTCCCTTGTCTTCTTTCTTTCATTCAACCCTTTTCTTGTTCTAAAGTTTTGCCTATGTTTCTTTCCTGGGTTTCTGTTAGGAAGGTTATTGGTGGTTGGTGGGGTTTTCAACTAACATATAGCCATGGGTATCCCCTGTAGTCTTTGTTTGTTGTAGCCGGTACTCTCATTTATCTACTTTTTTCATTGCCTCCACATCTTATATAATCTTTACACTTGTAATCTACAACATAAACCCATTCACTGGAAAGAACTAAGCCTTGATTTCTTGTATCTATATGGTATTTGGTCAGTTTAAAGATTGTAAAATCTCTTTTTCCTGATATGGGGGATCACTTTGTTTTGCTGGTTGATCGATTGTTGACGGAGACGACATTAGAAGCAGCGATTGAGAGCCAAAAGCATGCCATGGATGGTTTGAAGGGGGACAGTTCTTGCCCAGAAATGGAGTTTGACAATATACCATTTCCAAAGAAAATTGTGGAATGTAGAATATGCCAGGATGAAGATGAAGACTCGAACATGGAAACACCTTGCTCGTGCTGTGGCAGCCTTAAGTATGCACATCGAAGATGCATACAGAAGTGGTGTAACGAAAAGGGTGATACAATTTGTGAGATATGCCGCCAGCAATTCAAACCAGGTTACACAGCATCTCCTCCATTATTCGAAATGGGGCGTATTCCAATGAGCTTCAGGGGGAACTGGGAGATTTCTAGAAGGAACTTGGATAGTTCTAGCTATATAGCAATGGTTTCTTCAAACCGTAATGTTGTTGATACCGAATATGATGAGTTCTCAGCTTCTGCTGCAACCAGCGTGCTATGCTTCCATTCCTTTGCTATTGTTTTCATGGTTCTTCTGGTTTTGAGGCACACTCTTCCCCTCATATTCAATGAAAGCGGTGGTTACTCTTTCCCTCTACTTCTGTCGATTTGCCTGCGAAGTTTACTGATCGTTCTACCAATATACGTTATGTTGAAAGTAGTCTCTGCAGTTCATCGTCGTCGACTTCTCCTGGCTACATCTTCTAGTTCATCCATTCATTCAACCAGCAGCATAGTTAGGAGTTCGACATCCGTATCGTCCCAACCTCAGCCTTACATTATCCGCGTTCGGTTGAAGTAA ATGGGGGATCACTTTGTTTTGCTGGTTGATCGATTGTTGACGGAGACGACATTAGAAGCAGCGATTGAGAGCCAAAAGCATGCCATGGATGGTTTGAAGGGGGACAGTTCTTGCCCAGAAATGGAGTTTGACAATATACCATTTCCAAAGAAAATTGTGGAATGTAGAATATGCCAGGATGAAGATGAAGACTCGAACATGGAAACACCTTGCTCGTGCTGTGGCAGCCTTAAGTATGCACATCGAAGATGCATACAGAAGTGGTGTAACGAAAAGGGTGATACAATTTGTGAGATATGCCGCCAGCAATTCAAACCAGGTTACACAGCATCTCCTCCATTATTCGAAATGGGGCGTATTCCAATGAGCTTCAGGGGGAACTGGGAGATTTCTAGAAGGAACTTGGATAGTTCTAGCTATATAGCAATGGTTTCTTCAAACCGTAATGTTGTTGATACCGAATATGATGAGTTCTCAGCTTCTGCTGCAACCAGCGTGCTATGCTTCCATTCCTTTGCTATTGTTTTCATGGTTCTTCTGGTTTTGAGGCACACTCTTCCCCTCATATTCAATGAAAGCGGTGGTTACTCTTTCCCTCTACTTCTGTCGATTTGCCTGCGAAGTTTACTGATCGTTCTACCAATATACGTTATGTTGAAAGTAGTCTCTGCAGTTCATCGTCGTCGACTTCTCCTGGCTACATCTTCTAGTTCATCCATTCATTCAACCAGCAGCATAGTTAGGAGTTCGACATCCGTATCGTCCCAACCTCAGCCTTACATTATCCGCGTTCGGTTGAAGTAA MGDHFVLLVDRLLTETTLEAAIESQKHAMDGLKGDSSCPEMEFDNIPFPKKIVECRICQDEDEDSNMETPCSCCGSLKYAHRRCIQKWCNEKGDTICEICRQQFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTEYDEFSASAATSVLCFHSFAIVFMVLLVLRHTLPLIFNESGGYSFPLLLSICLRSLLIVLPIYVMLKVVSAVHRRRLLLATSSSSSIHSTSSIVRSSTSVSSQPQPYIIRVRLK Homology
BLAST of CmaCh15G009530 vs. ExPASy Swiss-Prot
Match: Q0VD59 (E3 ubiquitin-protein ligase MARCHF8 OS=Bos taurus OX=9913 GN=MARCHF8 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07 Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0
BLAST of CmaCh15G009530 vs. ExPASy Swiss-Prot
Match: Q5T0T0 (E3 ubiquitin-protein ligase MARCHF8 OS=Homo sapiens OX=9606 GN=MARCHF8 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07 Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0
BLAST of CmaCh15G009530 vs. ExPASy Swiss-Prot
Match: Q9DBD2 (E3 ubiquitin-protein ligase MARCHF8 OS=Mus musculus OX=10090 GN=Marchf8 PE=2 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.9e-07 Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0
BLAST of CmaCh15G009530 vs. ExPASy Swiss-Prot
Match: Q5XH39 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus laevis OX=8355 GN=marchf8 PE=2 SV=2) HSP 1 Score: 56.6 bits (135), Expect = 4.9e-07 Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0
BLAST of CmaCh15G009530 vs. ExPASy Swiss-Prot
Match: Q28IK8 (E3 ubiquitin-protein ligase MARCHF8 OS=Xenopus tropicalis OX=8364 GN=marchf8 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.9e-07 Identity = 22/51 (43.14%), Postives = 32/51 (62.75%), Query Frame = 0
BLAST of CmaCh15G009530 vs. ExPASy TrEMBL
Match: A0A6J1K1N8 (uncharacterized protein LOC111489819 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489819 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.5e-144 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of CmaCh15G009530 vs. ExPASy TrEMBL
Match: A0A6J1K1P4 (uncharacterized protein LOC111489819 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489819 PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 2.0e-128 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CmaCh15G009530 vs. ExPASy TrEMBL
Match: A0A5A7TTY1 (DUF3675 domain-containing protein/RINGv domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00260 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 6.5e-119 Identity = 228/272 (83.82%), Postives = 241/272 (88.60%), Query Frame = 0
BLAST of CmaCh15G009530 vs. ExPASy TrEMBL
Match: A0A1S3CST5 (uncharacterized protein LOC103504564 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504564 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 6.5e-119 Identity = 228/272 (83.82%), Postives = 241/272 (88.60%), Query Frame = 0
BLAST of CmaCh15G009530 vs. ExPASy TrEMBL
Match: A0A1S3CST7 (uncharacterized protein LOC103504564 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504564 PE=4 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 6.5e-119 Identity = 228/272 (83.82%), Postives = 241/272 (88.60%), Query Frame = 0
BLAST of CmaCh15G009530 vs. NCBI nr
Match: XP_022993989.1 (uncharacterized protein LOC111489819 isoform X1 [Cucurbita maxima] >XP_022993990.1 uncharacterized protein LOC111489819 isoform X1 [Cucurbita maxima]) HSP 1 Score: 521.9 bits (1343), Expect = 3.2e-144 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of CmaCh15G009530 vs. NCBI nr
Match: KAG6579246.1 (putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 490.7 bits (1262), Expect = 7.8e-135 Identity = 255/272 (93.75%), Postives = 258/272 (94.85%), Query Frame = 0
BLAST of CmaCh15G009530 vs. NCBI nr
Match: XP_022993991.1 (uncharacterized protein LOC111489819 isoform X2 [Cucurbita maxima] >XP_022993993.1 uncharacterized protein LOC111489819 isoform X2 [Cucurbita maxima] >XP_022993994.1 uncharacterized protein LOC111489819 isoform X2 [Cucurbita maxima]) HSP 1 Score: 468.4 bits (1204), Expect = 4.2e-128 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of CmaCh15G009530 vs. NCBI nr
Match: XP_023551194.1 (uncharacterized protein LOC111809081 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 451.4 bits (1160), Expect = 5.3e-123 Identity = 236/257 (91.83%), Postives = 242/257 (94.16%), Query Frame = 0
BLAST of CmaCh15G009530 vs. NCBI nr
Match: XP_008467135.1 (PREDICTED: uncharacterized protein LOC103504564 isoform X1 [Cucumis melo]) HSP 1 Score: 436.8 bits (1122), Expect = 1.3e-118 Identity = 228/272 (83.82%), Postives = 241/272 (88.60%), Query Frame = 0
BLAST of CmaCh15G009530 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 236.1 bits (601), Expect = 3.2e-62 Identity = 131/269 (48.70%), Postives = 168/269 (62.45%), Query Frame = 0
BLAST of CmaCh15G009530 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 236.1 bits (601), Expect = 3.2e-62 Identity = 131/269 (48.70%), Postives = 168/269 (62.45%), Query Frame = 0
BLAST of CmaCh15G009530 vs. TAIR 10
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 179.5 bits (454), Expect = 3.6e-45 Identity = 95/229 (41.48%), Postives = 137/229 (59.83%), Query Frame = 0
BLAST of CmaCh15G009530 vs. TAIR 10
Match: AT1G14260.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-39 Identity = 97/257 (37.74%), Postives = 145/257 (56.42%), Query Frame = 0
BLAST of CmaCh15G009530 vs. TAIR 10
Match: AT1G14260.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-39 Identity = 97/257 (37.74%), Postives = 145/257 (56.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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