CmaCh15G003040 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAAATATAAGACACACGGGCTTTGTCTCCGACTTTAAAACCAACCCAAACTCGAACCTTCTTCACACATCAATCCTTCTAATTTCATGACAATTACTGTCGGTTGCTGCTGCTTCTCGCCTTCATTGTGACACAATATCTACTACTCAATGTGAATAGATCTAAAAATATTATTATCAAGTAAACAATACAAAGATAAGAATGAGAAAATAAAATTGAAATCAAAGGTTCAATATATTCACAAGGTTTAAATTGAATATAAGCTACCAACTAATACCTACTCAAAATATAAGCTAACCATGAGAATAAAATAAAATATACTACTAATAATCAAATGAAAAATATTAACTGATTCAATAACTAATATCTTTTCCAAATATTAAAATATCTTGACTAATTCAAATTAGCAATAAGTTGCACTAAATTTTAAAATACTTATAATTAATATAGAACGGATTAAGAAAATATTTGACTAATTCACCTTTATCATTAATATATTTCCAAAATATTAAGAATATCTTAATTAATTTAAACTAGCAATCAGTTGCACTAAATTCTAATATATATTTGGTCCCGTGAGAAGATGCATTTGACATACAGATTCATTCACAATTACCCACCCAAGTTTGTGGCTCAAGTGATTCGAGCTTTTGAGACATGAGACATGGGAGGCCAGCACCAATTTCACCTTCTCCCAGTTAGCCAGGGTCCAAACGGCTGACATACAATTAAGCTTCGAGAGAGGGGAGCAAGGAGATGGGCATCCCTTGGACGGATGCGGGGGAGTATTGGCGCATTGTTTTGGGCCAATTGATGGGAGAATCCACTTCGACGCGGATCAGCAGTGGGATTGGAGTGTTCGTATATTGCACAATGACTTGGAGTCTGTGGCATTGCATGAGATTGGGCATGCCCACACCGACGTTCAAGATGCCGTCATGTGGCCTATTATCAACTTTGGATTCACAAAGACCCACCTGCATCACCATGATATTAATGGTATTAGTGCTATATACCCAGATTAA ATGCCAAATATAAGACACACGGGCTTTTTAGCCAGGGTCCAAACGGCTGACATACAATTAAGCTTCGAGAGAGGGGAGCAAGGAGATGGGCATCCCTTGGACGGATGCGGGGGAGTATTGGCGCATTGTTTTGGGCCAATTGATGGGAGAATCCACTTCGACGCGGATCAGCAGTGGGATTGGAGTGTTCGTATATTGCACAATGACTTGGAGTCTGTGGCATTGCATGAGATTGGGCATGCCCACACCGACGTTCAAGATGCCGTCATGTGGCCTATTATCAACTTTGGATTCACAAAGACCCACCTGCATCACCATGATATTAATGGTATTAGTGCTATATACCCAGATTAA ATGCCAAATATAAGACACACGGGCTTTTTAGCCAGGGTCCAAACGGCTGACATACAATTAAGCTTCGAGAGAGGGGAGCAAGGAGATGGGCATCCCTTGGACGGATGCGGGGGAGTATTGGCGCATTGTTTTGGGCCAATTGATGGGAGAATCCACTTCGACGCGGATCAGCAGTGGGATTGGAGTGTTCGTATATTGCACAATGACTTGGAGTCTGTGGCATTGCATGAGATTGGGCATGCCCACACCGACGTTCAAGATGCCGTCATGTGGCCTATTATCAACTTTGGATTCACAAAGACCCACCTGCATCACCATGATATTAATGGTATTAGTGCTATATACCCAGATTAA MPNIRHTGFLARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDLESVALHEIGHAHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIYPD Homology
BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.6e-18 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 0
BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot
Match: Q9ZUJ5 (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.1e-18 Identity = 52/113 (46.02%), Postives = 63/113 (55.75%), Query Frame = 0
BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot
Match: Q8GWW6 (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.7e-18 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 0
BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot
Match: P29136 (Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2) HSP 1 Score: 90.9 bits (224), Expect = 1.0e-17 Identity = 48/112 (42.86%), Postives = 64/112 (57.14%), Query Frame = 0
BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.8e-15 Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 0
BLAST of CmaCh15G003040 vs. ExPASy TrEMBL
Match: A0A6J1FF28 (metalloendoproteinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445134 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 2.8e-50 Identity = 96/111 (86.49%), Postives = 99/111 (89.19%), Query Frame = 0
BLAST of CmaCh15G003040 vs. ExPASy TrEMBL
Match: A0A6J1K202 (metalloendoproteinase 5-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111489405 PE=3 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 3.7e-34 Identity = 69/94 (73.40%), Postives = 74/94 (78.72%), Query Frame = 0
BLAST of CmaCh15G003040 vs. ExPASy TrEMBL
Match: A0A5D3BUL7 (Metalloendoproteinase 3-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00140 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 9.7e-27 Identity = 66/110 (60.00%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of CmaCh15G003040 vs. ExPASy TrEMBL
Match: A0A1S3C8Z2 (metalloendoproteinase 3-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498174 PE=3 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 9.7e-27 Identity = 66/110 (60.00%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of CmaCh15G003040 vs. ExPASy TrEMBL
Match: A0A5D3BRA5 (Metalloendoproteinase 3-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00150 PE=3 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 4.8e-26 Identity = 64/118 (54.24%), Postives = 78/118 (66.10%), Query Frame = 0
BLAST of CmaCh15G003040 vs. NCBI nr
Match: XP_023551534.1 (metalloendoproteinase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 208.0 bits (528), Expect = 4.4e-50 Identity = 95/111 (85.59%), Postives = 98/111 (88.29%), Query Frame = 0
BLAST of CmaCh15G003040 vs. NCBI nr
Match: XP_022939136.1 (metalloendoproteinase 1-like [Cucurbita moschata]) HSP 1 Score: 207.6 bits (527), Expect = 5.8e-50 Identity = 96/111 (86.49%), Postives = 99/111 (89.19%), Query Frame = 0
BLAST of CmaCh15G003040 vs. NCBI nr
Match: XP_023551530.1 (metalloendoproteinase 5-MMP-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 174.5 bits (441), Expect = 5.4e-40 Identity = 79/106 (74.53%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of CmaCh15G003040 vs. NCBI nr
Match: XP_022993363.1 (metalloendoproteinase 5-MMP-like [Cucurbita maxima]) HSP 1 Score: 154.1 bits (388), Expect = 7.6e-34 Identity = 69/94 (73.40%), Postives = 74/94 (78.72%), Query Frame = 0
BLAST of CmaCh15G003040 vs. NCBI nr
Match: KAA0037452.1 (metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa] >TYK01926.1 metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa]) HSP 1 Score: 129.4 bits (324), Expect = 2.0e-26 Identity = 66/110 (60.00%), Postives = 76/110 (69.09%), Query Frame = 0
BLAST of CmaCh15G003040 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase ) HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19 Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 0
BLAST of CmaCh15G003040 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein ) HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19 Identity = 52/113 (46.02%), Postives = 63/113 (55.75%), Query Frame = 0
BLAST of CmaCh15G003040 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein ) HSP 1 Score: 92.0 bits (227), Expect = 3.3e-19 Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 0
BLAST of CmaCh15G003040 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein ) HSP 1 Score: 87.4 bits (215), Expect = 8.1e-18 Identity = 45/116 (38.79%), Postives = 60/116 (51.72%), Query Frame = 0
BLAST of CmaCh15G003040 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein ) HSP 1 Score: 82.8 bits (203), Expect = 2.0e-16 Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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