CmaCh15G003040 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh15G003040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	metalloendoproteinase 1-like
Location	Cma_Chr15: 1415939 .. 1416966 (-)
RNA-Seq Expression	CmaCh15G003040
Synteny	CmaCh15G003040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAATATAAGACACACGGGCTTTGTCTCCGACTTTAAAACCAACCCAAACTCGAACCTTCTTCACACATCAATCCTTCTAATTTCATGACAATTACTGTCGGTTGCTGCTGCTTCTCGCCTTCATTGTGACACAATATCTACTACTCAATGTGAATAGATCTAAAAATATTATTATCAAGTAAACAATACAAAGATAAGAATGAGAAAATAAAATTGAAATCAAAGGTTCAATATATTCACAAGGTTTAAATTGAATATAAGCTACCAACTAATACCTACTCAAAATATAAGCTAACCATGAGAATAAAATAAAATATACTACTAATAATCAAATGAAAAATATTAACTGATTCAATAACTAATATCTTTTCCAAATATTAAAATATCTTGACTAATTCAAATTAGCAATAAGTTGCACTAAATTTTAAAATACTTATAATTAATATAGAACGGATTAAGAAAATATTTGACTAATTCACCTTTATCATTAATATATTTCCAAAATATTAAGAATATCTTAATTAATTTAAACTAGCAATCAGTTGCACTAAATTCTAATATATATTTGGTCCCGTGAGAAGATGCATTTGACATACAGATTCATTCACAATTACCCACCCAAGTTTGTGGCTCAAGTGATTCGAGCTTTTGAGACATGAGACATGGGAGGCCAGCACCAATTTCACCTTCTCCCAGTTAGCCAGGGTCCAAACGGCTGACATACAATTAAGCTTCGAGAGAGGGGAGCAAGGAGATGGGCATCCCTTGGACGGATGCGGGGGAGTATTGGCGCATTGTTTTGGGCCAATTGATGGGAGAATCCACTTCGACGCGGATCAGCAGTGGGATTGGAGTGTTCGTATATTGCACAATGACTTGGAGTCTGTGGCATTGCATGAGATTGGGCATGCCCACACCGACGTTCAAGATGCCGTCATGTGGCCTATTATCAACTTTGGATTCACAAAGACCCACCTGCATCACCATGATATTAATGGTATTAGTGCTATATACCCAGATTAA

mRNA sequence

ATGCCAAATATAAGACACACGGGCTTTTTAGCCAGGGTCCAAACGGCTGACATACAATTAAGCTTCGAGAGAGGGGAGCAAGGAGATGGGCATCCCTTGGACGGATGCGGGGGAGTATTGGCGCATTGTTTTGGGCCAATTGATGGGAGAATCCACTTCGACGCGGATCAGCAGTGGGATTGGAGTGTTCGTATATTGCACAATGACTTGGAGTCTGTGGCATTGCATGAGATTGGGCATGCCCACACCGACGTTCAAGATGCCGTCATGTGGCCTATTATCAACTTTGGATTCACAAAGACCCACCTGCATCACCATGATATTAATGGTATTAGTGCTATATACCCAGATTAA

Coding sequence (CDS)

ATGCCAAATATAAGACACACGGGCTTTTTAGCCAGGGTCCAAACGGCTGACATACAATTAAGCTTCGAGAGAGGGGAGCAAGGAGATGGGCATCCCTTGGACGGATGCGGGGGAGTATTGGCGCATTGTTTTGGGCCAATTGATGGGAGAATCCACTTCGACGCGGATCAGCAGTGGGATTGGAGTGTTCGTATATTGCACAATGACTTGGAGTCTGTGGCATTGCATGAGATTGGGCATGCCCACACCGACGTTCAAGATGCCGTCATGTGGCCTATTATCAACTTTGGATTCACAAAGACCCACCTGCATCACCATGATATTAATGGTATTAGTGCTATATACCCAGATTAA

Protein sequence

MPNIRHTGFLARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDLESVALHEIGHAHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIYPD

Homology

[Close]

BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.6e-18
Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 0


Query: 15  TADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRI-------LH 74
           T+DI + F  G+ GDG P DG  G LAH F P  G+ H DAD+ W  S  +         
Sbjct: 212 TSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAA 271

Query: 75  NDLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
            DLESVA+HEIGH     H+ V++++M+P I  G  K  L + D+ GI  +Y
Sbjct: 272 VDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLY 323

[Close]

BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot
Match: Q9ZUJ5 (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.1e-18
Identity = 52/113 (46.02%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 16  ADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQW-----DWSVRILH--- 75
           ADI + F  GE GDG P DG  G LAH   P  G +H D D+ W     + S RIL    
Sbjct: 201 ADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTT 260

Query: 76  -NDLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
             DLESVA+HEIGH     H+ V+DA+M+P I+ G  K  L   DI GI  +Y
Sbjct: 261 VVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLY 313

[Close]

BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot
Match: Q8GWW6 (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.7e-18
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 16  ADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQW----DWSVRILHNDLE 75
           ADI++ F  G+ GDG P DG  GVLAH F P +GR+H D  + W    D     +  DLE
Sbjct: 188 ADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLE 247

Query: 76  SVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           SVA+HEIGH     H+ V+DA M+P +     K +L+  D+ G+ ++Y
Sbjct: 248 SVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

[Close]

BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot
Match: P29136 (Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-17
Identity = 48/112 (42.86%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 14  QTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHN----- 73
           +TA+I++ F     GD +P DG GG+L H F P DGR HFDAD+ W  S  +  +     
Sbjct: 190 ETANIKILFASKNHGDPYPFDGPGGILGHAFAPTDGRCHFDADEYWVASGDVTKSPVTSA 249

Query: 74  -DLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
            DLESVA+HEIGH     H+    A+M+P I     K +L   DI+GI  +Y
Sbjct: 250 FDLESVAVHEIGHLLGLGHSSDLRAIMYPSIPPRTRKVNLAQDDIDGIRKLY 301

[Close]

BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.8e-15
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 15  TADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHN-----D 74
           TAD+++ F  G+ GDG P DG  G LAH F P +GR+H DA + W     +  +     D
Sbjct: 209 TADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVD 268

Query: 75  LESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           LESVA HEIGH     H+  + AVM+P +     K  L   D+ G+  +Y
Sbjct: 269 LESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLY 318

[Close]

BLAST of CmaCh15G003040 vs. ExPASy TrEMBL
Match: A0A6J1FF28 (metalloendoproteinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445134 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.8e-50
Identity = 96/111 (86.49%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 11  ARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDL 70
           ARVQTADIQ+SFERGE GDGHPLDG GGVLAHCFGPI GRIHFDADQQWDW VRIL NDL
Sbjct: 43  ARVQTADIQISFERGEHGDGHPLDGYGGVLAHCFGPIAGRIHFDADQQWDWGVRILQNDL 102

Query: 71  ESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIYPD 118
           ESVALHEIGHA    HTDVQDAVMWPIINFGFTKTHLHH DINGI A++ D
Sbjct: 103 ESVALHEIGHALGLGHTDVQDAVMWPIINFGFTKTHLHHDDINGIRAMHGD 153

[Close]

BLAST of CmaCh15G003040 vs. ExPASy TrEMBL
Match: A0A6J1K202 (metalloendoproteinase 5-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111489405 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.7e-34
Identity = 69/94 (73.40%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 26  EQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDLESVALHEIGHA---- 85
           + GDGHP DG GG LAHCFGPIDGR+HFDA + WDW VRIL NDLESVALHEI HA    
Sbjct: 164 DHGDGHPFDGFGGALAHCFGPIDGRVHFDAQEVWDWGVRILQNDLESVALHEIRHALGLG 223

Query: 86  HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           HTDVQDAVMWP +NFG  KT LH  DINGI A+Y
Sbjct: 224 HTDVQDAVMWPTMNFGSRKTRLHDDDINGIRALY 257

[Close]

BLAST of CmaCh15G003040 vs. ExPASy TrEMBL
Match: A0A5D3BUL7 (Metalloendoproteinase 3-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00140 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.7e-27
Identity = 66/110 (60.00%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 11  ARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWD-WSVRILHND 70
           ARVQTADI LSFERG+ GDG P DG GG L H FG IDGR+HFD D+QW+  S    + D
Sbjct: 193 ARVQTADILLSFERGDHGDGKPFDGPGGALGHAFGAIDGRVHFDGDEQWETGSFWQEYFD 252

Query: 71  LESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           +ESVALHEIGHA    H+    AVMW  ++ G TKTHL   DI GI A+Y
Sbjct: 253 VESVALHEIGHALGLGHSREPSAVMWANMDSGVTKTHLTIDDIEGIHALY 302

[Close]

BLAST of CmaCh15G003040 vs. ExPASy TrEMBL
Match: A0A1S3C8Z2 (metalloendoproteinase 3-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498174 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.7e-27
Identity = 66/110 (60.00%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 11  ARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWD-WSVRILHND 70
           ARVQTADI LSFERG+ GDG P DG GG L H FG IDGR+HFD D+QW+  S    + D
Sbjct: 193 ARVQTADILLSFERGDHGDGKPFDGPGGALGHAFGAIDGRVHFDGDEQWETGSFWQEYFD 252

Query: 71  LESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           +ESVALHEIGHA    H+    AVMW  ++ G TKTHL   DI GI A+Y
Sbjct: 253 VESVALHEIGHALGLGHSREPSAVMWANMDSGVTKTHLTIDDIEGIHALY 302

[Close]

BLAST of CmaCh15G003040 vs. ExPASy TrEMBL
Match: A0A5D3BRA5 (Metalloendoproteinase 3-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00150 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.8e-26
Identity = 64/118 (54.24%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 3   NIRHTGFLA-RVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDW 62
           N + + FLA RVQTADI +SFERGE GD  P DG GG+LAH  G +DGR+HFDAD+QW+ 
Sbjct: 185 NTKFSFFLAPRVQTADILVSFERGEHGDDEPFDGPGGILAHSLGAVDGRVHFDADEQWEG 244

Query: 63  SVRILHNDLESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
                  DLE++ALHE+GHA    H+    AVMW  +  GF KT L   DI GI A+Y
Sbjct: 245 GPVEKRYDLETLALHELGHALGLGHSSSSLAVMWAYMYAGFPKTRLTIDDIEGIRALY 302

[Close]

BLAST of CmaCh15G003040 vs. NCBI nr
Match: XP_023551534.1 (metalloendoproteinase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 208.0 bits (528), Expect = 4.4e-50
Identity = 95/111 (85.59%), Postives = 98/111 (88.29%), Query Frame = 0


Query: 11  ARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDL 70
           ARVQTAD+QLSFERGE GDGHPLDG GG+LAHCFGPIDGRIHFDADQ+WDW VRIL NDL
Sbjct: 19  ARVQTADMQLSFERGEHGDGHPLDGYGGILAHCFGPIDGRIHFDADQEWDWGVRILQNDL 78

Query: 71  ESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIYPD 118
           ESVALHEIGHA    HTDVQ AVMWPIINFGFTKTHLHHH INGI A Y D
Sbjct: 79  ESVALHEIGHALGLGHTDVQGAVMWPIINFGFTKTHLHHHHINGIRATYGD 129

[Close]

BLAST of CmaCh15G003040 vs. NCBI nr
Match: XP_022939136.1 (metalloendoproteinase 1-like [Cucurbita moschata])

HSP 1 Score: 207.6 bits (527), Expect = 5.8e-50
Identity = 96/111 (86.49%), Postives = 99/111 (89.19%), Query Frame = 0


Query: 11  ARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDL 70
           ARVQTADIQ+SFERGE GDGHPLDG GGVLAHCFGPI GRIHFDADQQWDW VRIL NDL
Sbjct: 43  ARVQTADIQISFERGEHGDGHPLDGYGGVLAHCFGPIAGRIHFDADQQWDWGVRILQNDL 102

Query: 71  ESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIYPD 118
           ESVALHEIGHA    HTDVQDAVMWPIINFGFTKTHLHH DINGI A++ D
Sbjct: 103 ESVALHEIGHALGLGHTDVQDAVMWPIINFGFTKTHLHHDDINGIRAMHGD 153

[Close]

BLAST of CmaCh15G003040 vs. NCBI nr
Match: XP_023551530.1 (metalloendoproteinase 5-MMP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174.5 bits (441), Expect = 5.4e-40
Identity = 79/106 (74.53%), Postives = 85/106 (80.19%), Query Frame = 0


Query: 14  QTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDLESV 73
           QTADI LSFER + GDGHP DG GG LAHCFGPIDGR+HFDA + WDW +RIL NDLESV
Sbjct: 172 QTADIVLSFERRDHGDGHPFDGLGGALAHCFGPIDGRVHFDAQEIWDWGIRILQNDLESV 231

Query: 74  ALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           ALHEIGHA    HTDVQDAVMWP +NFG  KT LH  DINGI A+Y
Sbjct: 232 ALHEIGHALGLGHTDVQDAVMWPTMNFGSRKTRLHDDDINGIHALY 277

[Close]

BLAST of CmaCh15G003040 vs. NCBI nr
Match: XP_022993363.1 (metalloendoproteinase 5-MMP-like [Cucurbita maxima])

HSP 1 Score: 154.1 bits (388), Expect = 7.6e-34
Identity = 69/94 (73.40%), Postives = 74/94 (78.72%), Query Frame = 0


Query: 26  EQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHNDLESVALHEIGHA---- 85
           + GDGHP DG GG LAHCFGPIDGR+HFDA + WDW VRIL NDLESVALHEI HA    
Sbjct: 164 DHGDGHPFDGFGGALAHCFGPIDGRVHFDAQEVWDWGVRILQNDLESVALHEIRHALGLG 223

Query: 86  HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           HTDVQDAVMWP +NFG  KT LH  DINGI A+Y
Sbjct: 224 HTDVQDAVMWPTMNFGSRKTRLHDDDINGIRALY 257

[Close]

BLAST of CmaCh15G003040 vs. NCBI nr
Match: KAA0037452.1 (metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa] >TYK01926.1 metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa])

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-26
Identity = 66/110 (60.00%), Postives = 76/110 (69.09%), Query Frame = 0


Query: 11  ARVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWD-WSVRILHND 70
           ARVQTADI LSFERG+ GDG P DG GG L H FG IDGR+HFD D+QW+  S    + D
Sbjct: 193 ARVQTADILLSFERGDHGDGKPFDGPGGALGHAFGAIDGRVHFDGDEQWETGSFWQEYFD 252

Query: 71  LESVALHEIGHA----HTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           +ESVALHEIGHA    H+    AVMW  ++ G TKTHL   DI GI A+Y
Sbjct: 253 VESVALHEIGHALGLGHSREPSAVMWANMDSGVTKTHLTIDDIEGIHALY 302

[Close]

BLAST of CmaCh15G003040 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase )

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 47/112 (41.96%), Postives = 63/112 (56.25%), Query Frame = 0


Query: 15  TADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRI-------LH 74
           T+DI + F  G+ GDG P DG  G LAH F P  G+ H DAD+ W  S  +         
Sbjct: 212 TSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDSFLSVTAA 271

Query: 75  NDLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
            DLESVA+HEIGH     H+ V++++M+P I  G  K  L + D+ GI  +Y
Sbjct: 272 VDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLY 323

[Close]

BLAST of CmaCh15G003040 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.5e-19
Identity = 52/113 (46.02%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 16  ADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQW-----DWSVRILH--- 75
           ADI + F  GE GDG P DG  G LAH   P  G +H D D+ W     + S RIL    
Sbjct: 201 ADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRRILPVTT 260

Query: 76  -NDLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
             DLESVA+HEIGH     H+ V+DA+M+P I+ G  K  L   DI GI  +Y
Sbjct: 261 VVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLY 313

[Close]

BLAST of CmaCh15G003040 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein )

HSP 1 Score: 92.0 bits (227), Expect = 3.3e-19
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 16  ADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQW----DWSVRILHNDLE 75
           ADI++ F  G+ GDG P DG  GVLAH F P +GR+H D  + W    D     +  DLE
Sbjct: 188 ADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEKSSVAVDLE 247

Query: 76  SVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           SVA+HEIGH     H+ V+DA M+P +     K +L+  D+ G+ ++Y
Sbjct: 248 SVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLY 295

[Close]

BLAST of CmaCh15G003040 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein )

HSP 1 Score: 87.4 bits (215), Expect = 8.1e-18
Identity = 45/116 (38.79%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 12  RVQTADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQW-------DWSVR 71
           R  T+DI + F  GE GDG P DG    LAH F P  G  H D ++ W       D  + 
Sbjct: 213 RFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEGGDGFIS 272

Query: 72  ILHN-DLESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           +    DLESVA+HEIGH     H+ V+ ++M+P I  G  K  L   D+ G+  +Y
Sbjct: 273 VSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQYLY 328

[Close]

BLAST of CmaCh15G003040 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein )

HSP 1 Score: 82.8 bits (203), Expect = 2.0e-16
Identity = 44/110 (40.00%), Postives = 60/110 (54.55%), Query Frame = 0


Query: 15  TADIQLSFERGEQGDGHPLDGCGGVLAHCFGPIDGRIHFDADQQWDWSVRILHN-----D 74
           TAD+++ F  G+ GDG P DG  G LAH F P +GR+H DA + W     +  +     D
Sbjct: 209 TADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKGSSEVAVD 268

Query: 75  LESVALHEIGH----AHTDVQDAVMWPIINFGFTKTHLHHHDINGISAIY 116
           LESVA HEIGH     H+  + AVM+P +     K  L   D+ G+  +Y
Sbjct: 269 LESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLY 318

The following BLAST results are available for this feature:

BLAST of CmaCh15G003040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04529	1.6e-18	41.96	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
Q9ZUJ5	2.1e-18	46.02	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1	[more]
Q8GWW6	4.7e-18	42.59	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1	[more]
P29136	1.0e-17	42.86	Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2	[more]
O23507	2.8e-15	40.00	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1	[more]

BLAST of CmaCh15G003040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FF28	2.8e-50	86.49	metalloendoproteinase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445134 PE=4 ...	[more]
A0A6J1K202	3.7e-34	73.40	metalloendoproteinase 5-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111489405 PE=...	[more]
A0A5D3BUL7	9.7e-27	60.00	Metalloendoproteinase 3-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C8Z2	9.7e-27	60.00	metalloendoproteinase 3-MMP-like OS=Cucumis melo OX=3656 GN=LOC103498174 PE=3 SV...	[more]
A0A5D3BRA5	4.8e-26	54.24	Metalloendoproteinase 3-MMP-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of CmaCh15G003040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551534.1	4.4e-50	85.59	metalloendoproteinase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939136.1	5.8e-50	86.49	metalloendoproteinase 1-like [Cucurbita moschata]	[more]
XP_023551530.1	5.4e-40	74.53	metalloendoproteinase 5-MMP-like [Cucurbita pepo subsp. pepo]	[more]
XP_022993363.1	7.6e-34	73.40	metalloendoproteinase 5-MMP-like [Cucurbita maxima]	[more]
KAA0037452.1	2.0e-26	60.00	metalloendoproteinase 3-MMP-like [Cucumis melo var. makuwa] >TYK01926.1 metalloe...	[more]

BLAST of CmaCh15G003040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70170.1	1.1e-19	41.96	matrix metalloproteinase	[more]
AT1G59970.1	1.5e-19	46.02	Matrixin family protein	[more]
AT2G45040.1	3.3e-19	42.59	Matrixin family protein	[more]
AT1G24140.1	8.1e-18	38.79	Matrixin family protein	[more]
AT4G16640.1	2.0e-16	40.00	Matrixin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 16..44 score: 51.93 coord: 103..116 score: 41.64 coord: 69..94 score: 24.81
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 12..115 e-value: 2.8E-27 score: 95.5
IPR024079	Metallopeptidase, catalytic domain superfamily	GENE3D	3.40.390.10	Collagenase (Catalytic Domain)	coord: 5..117 e-value: 9.5E-30 score: 105.7
None	No IPR available	PANTHER	PTHR10201:SF272	METALLOENDOPROTEINASE 2-MMP-LIKE	coord: 13..115
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 13..115
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 14..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G003040.1	CmaCh15G003040.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031012	extracellular matrix
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity