CmaCh14G004700 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G004700
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	regulation of nuclear pre-mRNA domain-containing protein 1B-like
Location	Cma_Chr14: 2282318 .. 2295346 (+)
RNA-Seq Expression	CmaCh14G004700
Synteny	CmaCh14G004700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACAACGAGGTTTTTGAAGCGCAGGTATTGGGTGAGAAGTTATCCAAGCTCAACAATTCTCAGCAGAGCATTGAGTGTATCCTTTCTCTAATCGTTATCTTTTATTTATTTCATTTTCTTTGTTTGAAGATATTTCGTTGCCCTCTCTATCATACTGCTGTCCTTCACAGTTTTTGTTCGGAGATTTTTTCCCTTTTATATATTTTTGAACCCTTTGTTTTTTTTTTTTGTGTGTGTGTGTGTTTATAGTCATGGACGTCAAAAGCAAAAAGAAAAGAAAAGAAAGGAGAAACAAAGTAGCGACTTTTGTCATTTACTAGTTATGAACGTACGAATTCACGTTGTGCCACTTACGATATTGGAAGAAACTGGATATGCTACGAGTGTGGTGATTTTCTATTAAAACTTGAAATTTTTATTAAATTTAATTTATTTTAATCTAGGTATTGGGGTCCCACTCCTTGCTCAAGGTCTGTCCCCTCTGATCCTTGGGAGGCTTGGAGGCCTCAAGGTGCTATTCAAGAGGCAAGGGGCTTCAAGCTGTTATCAACTTGAGGGCTTGAACTCAGGACCTTGGAAGGTAGCTTAGTAAAACCTTAACAAGTCAGCATTGTTGTCCAGAGTTGGTTCCAACTTACATTTTAGGTTTCTTTATTGCTTTAATGACATGTGGATCTGGATTTGGCATGGGCTCCTAACCTCAAGAAAGCCGGCAATAACACCCACGACTTAGGTCCAATTTACCTTTTACAAGGTATGGAACATCATTAAAGATGAGGTGCTTAGGGTGTTCCATGACTTTCTGAAAGCAACATTCTGAACAGTTGTATCAATGAAACCTATATGTGCCATGTTTCCAATAAAGCTTGTGTTACCAAATAAAGCTCGTGTTACCAAAGTTGTTGATTTCAGACCAATAAATTTGATCACCTTTCTATATAAGCTTATAGCTAAAGTCTTAGCTAAGAGACTTAAGAAGGTTCTCCATGAAACTATTAATGGTAGCCTATTGTCCTTGATTGCATGTTGGCAAATTCTCGACCCAATTTTGGTTGCCAATGAATTACTTGATGATTTTTTCATTAACAAGAAGGATGAGTGGGTCTTCAAAATTGATTTTGAGATGACTTACAATATGGTTGATTGAGATTGTCTCCTTGAGGTGCTAAAGCAAAAAGGCATTGGAACTTGTTGGATTGGTTGGATTAAAGCTTGGGTCACCAGTACTTTTTCTCTTTATTGATTAATGGTTGACTGAGCGGTCATATTTGTGCTACTAGGGAGTTAAGGCACGGCCATCCGCTTGCTCCTTTCCTGTCTTTCCTGACGACACGTTGCTTTTCTCTACCCTTGACTATTCTATGCTTAATAACTTGAAGAATGTGGTACTTGGATTTGAGGTCATGTCCAATTTGAAGATTAATCTCTCGTAATGTCTCTCGGCGCTAGAGTGGGTTTATGCTGCTGGCGTTAGAACATTTGAGTATCTGGGGATGTCCCTTGGTGGTAATCCAAAAAAAGTCTTCTTTTTGGCTGCCAGTTGTGGATAAAATTGATAGAAATTTGGATCGTAGAAAAAACCTTACTTTGTCAAGAAGAGGCAGAATTATGTTGGCCAAAACAGTTTTGTCATGTATCTATACTAAATTTTCTCTTTTCCCAGTAGGGTTCCCAATACGTAGGAGGGATTGATCAGATAACAAAAAAGATACCTAAGAAGTTCAATCAATTTACAAAAAATAACAAAAAAAGATCAAGCGGTGGTTATTCTAAAATAGGGATAACTGTGAGTGGTTGCATTGGCCGAAGAAAAAACTTGCAAGCTGGCTAACTCTTTGACAACACCACCACAGGGTGAGTTTTATTCTTTTTCCTTACTTTACTTTTGTTTGGGGTGAGGTATAAGATCCAAAATAAATCATAAAATATAAAACCTGATGTTGTAGGATTATGTTAATCTTGGGTATTTTTTTGGTTAATCCCTTTTTACCATCTTTTTGTGTCAATTCTTTATAAATTGAGAATCTCCCTCTGGTTTATTCTATTACTTGATTGTAGTAAAGATACTTGGTTTAATTTTGGGAAAAAACTCTCCTTTTATCTCTTAGGCTACACCATATATCGTTATAAAGGTTTGAGCTACAATATCAGGGATCTTTTTATAAAACAATCTTTCGCAATCAGAGTTCCCCATGGAGAAAAGGCAATTTATAGTATTTATTCTCATTGCAGATAAAGTTCTTCATGATAGGAGGAGGCGAAGGACAAGGGGGGACTTCGTTTTTAAGCATAGATAGGCTGATGATTTTGTGTTTGAGATTATTTTTTTATTTTTTTATTTTTTTATTTTTTTATTTTTTGCATTGGCATGACTTCTAAATACACTCGATGATTTATGCCTCTTATGGTCGCTCATTTTCATTGGCTTGTCTGGCAACTTTGGATAGAGTAGTTGTTGCCTTTTATTCCTTTTCTTTTTTTGGCAGTAAATTTACTGGGTTAGAAGACATTTCGGATGGTATAGTTCTTGTGTTTAGATGAAGCCCTCTTTGAAGACTTTTTTTTATATTTTATTTTTGTTGGGCACATACTAAATGAGGAGCGGTTCTTATACTGTATGCTCTTGGGAGAATGTTTTTATACTTAAGTAATTTCTGTTTATTGGGTGCAATTGTTATGAATTTGTTTATCGTTGATATCGAATTAGCTTTATCAAGATGGTGCATTTCCCACCGGAAAAAGGCCAAGCAGATTGTTGAAACTTGGGATAAATTATTCAACTCATCTCAGCAAGAGCAGCGTGTTTCATTTCTGTATTTGGCAAATGACATTTTGCAAAACAGCAGGCGCAAGGGAAGTGAATTTGTGAATGAATTCTGGAAAGTTCTTCCTGGTGCTCTCAAGTATGTCTACGATCAAGGCGATGAAAGTGGAAAGAAAGCAGCTGCTAGACTTGTATGTCCTCCTCTTTATAATTGTGTAGAAAAAAAAATGGTGGCATTAAATCTTTTTGGCTTTTTATATCTGGCAAGCTAGTTGACTCTGGGAATATGTTTCTCATAAGTATAAAATTTTGCATCGTGGGTATCTGACTTTTAAATTCTTCTCCTCCTTTCCTTCTTCAAAAAAATAAAAATAAAAATAAATAATAAATAAAATAAAAGAGGAAAAGGAGGATGGATTCAATTCATTCAGCTTGACAAGTTTGTATCACATTTCTAGTAAGGCTTCTCATAGACTGGCATTGTTAATAAAACTCTCATTTCTACTTAAGCAGTCTTTTGATTATGGTGTTTTTGATTATGGTGTTTTGTGAGTACTGTGGGTGCACCATTGATGTAATTCTTAAAGCTTGTATATTAGTTAGGAATAATCCAGTAAATTCTAGATATGTGGGTTTAATACTTCAGTTTGAAGCGTAATATGTGGGCCTTTTTCCTTCCCCTTTTGTCCTCCCATTCCTAGACCTAAGTTTAGTTTAGTTTTTTTTTATTCTTATTTTATTTTTAACCAATTATAATGATAATTGTTCTCTTACAGTAAAGAAGGAATTTAGGAACTATGAATCTTGTAAGGGATAGATGAATTTTCTTGATTTGATCTTATGACAAATATAGCTATTAGTGAGAGAGGAAAGGAAAATGAGCTGAGGTTTCATACAAAAACTTGTCATTCAAAAAGCTTATATTATTGGTTATGGTTTTATTAATTCTATCATTGTCGTAAGTATTTTAGAGAAAATTTGAGATGGTAAGCCTCCGGCATTCTTTTCATTTCGTATCTTATATTCTTGTTTATGTAAGACCAAAGAAAAATTTGTCACTTGAAGTTGATTGACACAAGATTTGATTTCCAATTCTCTTTCTTATACCAGTAGATGTTCCAAGTAAATTGATCATGTGACACTTGTTGATAGTGGATAATTTAGTAGGTTTGTATCATCCTAATCAGCCTTAGTGATGATACTATACACTAGTTGATATTGGAAATTTCAGTAGGTATGTGATATCTTAGTAAGTCCTTGAGAAGATTTTATATTTACAAGATCCATAAGAGATCCCTTATTTTGAATTCATAAGCTAATTTTTGTTTAGATATACATACATTCGCAAGCTCTTGAACTTAGCTAGTCTAATCTTGTGTCAGGGAGAAGCATATTTGATTTAGGTTGTGTAGATTTCTGTCCACATGGCAGCTGGAGGATTCTTTTTCCTATTTTAGACGAGAAGCTTCAGCTAGAACATTATCCAATTGATGTCTATTTTCTTTGATAATTAAAACATTTGAAGAGATCCCATTCCTTCTCGGGTTGAGGCAAGGTAGTTTTAATGTTCTGTGAGATTATCTCTTGTTTGAAGATTAATAGAAGCAAGTGTTAGATTTTAGGTCTAAATTGTGACCTTATCAAGTTGAGTGGGTAGGCTGCTTTAGTGAAGCATGATGTGGGAGACTTTCCTTCTTCCTATTTAGGTCCTCTCTTGGCCATAATCCTTAGATGTCTTTTGTTTTGGGACCTAGTAGCATGAAAGAGTTGAAAGAAGCCTGCCAAATTTTCTTTCGGAAGGTGATTGGTTCACCTTTGTATATTCAGTCTCGAGTAATATTCTGGTCTACTTTATGTCCCTATTTAGAGGCCTTGTAATAAGACTTTGGAGAAGCTTATAGGTATATTTTTACGGGAAGAAGTTGATGAGGGGAAAGGTTCCCATCATGTATGGTGGAAGGTGGTGAAGAAGTCGTGGACCTTGGGGGATGAGGCATAGGTAATTTATGGGCACAAAACAAGGTCTTGTAGGCTTAATGGTTGTGTTTCCATCATGAATCTAACACCTTATGGCATGAAGTCAATGCAAGCATGGTACTCACTCGTTTAAGTGGACCTTGGGCAAGGTTAAAGGTACTTCCAGAAACTCTTGGAAAGATGTTTCTCCTAAGCTCCCTTACCTTTGTAAATTGGGTGATGTGAGGAATATTGACTTTTGAGAGGATAAATGATTGGAGTGTAGACTCATTTGCTGTTTGTTTCCCCATTTATTTAAGTTTGCTTTATTTTTTAGAGATCTTTGTCTTAAAGACTTTTCTTATAGTTCCTTCTTTAACCGTATGGTAAGCTCATCCCCTTCTAATGGTTTGTCTTTTCCTTCTTGTGAAAGGTGAAAATTCTCAGGTAAGTTAAGTTCATGTGGCAGGTCATGGATAGAAGAGTAACACCTTGGATTGGATTTGAGCAGTGTTTTCAAAGTACAAGGTGCACTCCTAGGTGATAAACTTTTTAATTGCCTTAAGGCGAGAGGTGACAAAAAAAACACACCTGATTTTTGGAAGGCACACTTAATAAAATAATAAATAAAATATTATTACATATAAGAAAATACTTGATTTTTAAAGTGTTAAAATATTAACAAAATAATTCCTGATTAAAAAGAAATTAACTCAAATAATGTTGAGAAAAAGAAAAGATACTTGAAAAAAGAAATAGAAAGAAAAATGATTTTTAAAAGGTAAAAAGATAGGGGTCTCATGGTTTGAGACATATTTATTATAGAGGAAATATATTGACAATTGGTAGTTTGGCTAGCGTGCAGCTAACATTTCTTTATTCGTGGCAGCCTACCATTCGATTCTTCTAGGAATGTAAAAATAATAGCATTTTCATCGACTTTTCTTCTTCACTTCTGAATTTTTCAAACCTTCTTATTCCTTTTCTTCTTGTTTGGTATAAACCGTTGGTAAATGGCCGAACAAAAAGAGAGATTCCACCTTTTATTCTATTTCTTCTTCTTCTTTGACCCTTCTTTTTCTTCAATTCTTCTTCCTTGATTCTTCCTTTCTTTAATTATTTACTTATGAACTTTGATTCCTCCTCTTAATAAAAAAAAAATTAAAAGAACAAAATTTTTAAAAAAGGAAAAAGAAAAGTTGAACAATTAGAGAAGGTGATCGTTTGTGTCGCCTTGAACATATCTTCAAGGTGACTAAAAGTCTCAAATGGCAAGTGCCTTAATGAAGGTGCTCGCATTGATTACTTGCAAAGCATTAAGACCTGCCTCACCTCTTGCCATTGTGGAGCACCTGACTACGTGTCGACAACTCTAGAATTTTTGGAGATGTGCCTGTGTAGCCTAAGAGGTCATAAGGGAGAATTTTCTAAAAATCCAATCAAAGCCTAAATTATCTATCAAAAGTACTTAGTACATTAGGAGGAACTCCTTATTTATCTGGTTAAAGGAATCAATTTAGAGATTGCGATAATCCTTCCTACATCATTTCTAGCGTGGTTTGGTTGTTTTGTTGCATTATTTGTAGGAGGGAAGTTGAAGACCTTGATCAAGTTTTTTCTTTTTTAGGTGTGTTTTTGCAGGAGCCGCTTGGAGTTGTTTCTTTAAGGCATTTGACTTCTGCATTGTTAGACCTTAGGGTTGGAGGGAGACGAGCAATGAGCTCCTTCACATGCCCTTTAGTGAGAAGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGCAAGCTTAGATTTGTGNAATTTTGTGGGGCTTTAGGGGTGAGAGGAATAGCAAAATCTTTGTAGGACTTTCTCCGTGGACTTTACTTTTGTATGTCCTTATATTTTTTCATTTTTCTCACATCACCAACCAAATTCGCCATAGGTGGGTGGGTGATGGAGGAGGCACATCATTTTGGACCAACCCATGGATTGAAAACACCACGCTAGCCCTTTTGTATACTCTCTCACAGCAAATGAACCACTATCAAAGAAACGTGGAATAACGTCAGCTGTTTCTGGAACCTAATTTTTTATAGGAACCTAAAATATAATGAAGCTACGGAATGGTTCGAATTAACCCTCGACCTTGCCCCAGTTGTATTGTCAAATGAAGTAGACGCATTGACATGACTTCTTACTGCTAATGGGGTCTTCTCTACGAGATCTTTGATGATGGACATAGGAAAAAAAGTAGAAGTAATAAATTCCATGCTTGCAAAGACAGTAATCAGCCTAAAAAGGTAAGATATTTCCTTTGAAAAATAGTGCATTAAGTCATTAGCACAAGTGAAAATCTTCAAAAAAAAGAAAAATAATAAAATAAAAAATAAAAAATAAAAAAAAATCCCCAACATGACTCTATTTCCAAATTGACATCCACTATGCAAGAAAGATATGAATCACAAAGCCACCTTATTCATGCAATGCACATATGCTCAAAATTTTTAGATAAAGATTCTCAACATCTTCGGATGGCTTCTCACATTTCTTAGGGAGGTAAAAGATTATTTGTACTGGACCTTAATGTACCATTCCTTCAAGAACGAAAAAGCCTACTTTGGAAAAATCTCATCATGACTTTCTTTTGGAATTTGTGGAAAGAAAGAAATTAAGGAGTATTCACGAAAAACATAAACAAAGCTCTTCGACAATGTTGTTTACCAAGCTATATTTTAGTGTAAACTATCTAATATTTTAGTTTCCTATAGTTATACCTCCCTCATTGTGAATAAGGAAGGACTTTTGTGAACATCATGGGTATTACATCCTAAAAAAAAAAAAAAAAAAAAAAAAGGATGACCAGCCCATTCAGAAAGCTTTCGAGAAGGATGCTGATGAGATTTTCAAAAGATGATGATGTTAGTGTTGGTAGTTTTATTTTCTGATATTTGATCCAAGCTTGGTGGTCGGTGAAGAGTCTTGTGAATATAATAATGAGCAATCTGGTTTGGAAGATAGAGCTTGGATTATCTGAGGATATCCCCCTTAGTAACTTTCTTTGTTCTCCCTCTATTGCATCGATTAAAAAGATATTTTTGCATTATTGTGAAGAATTCAGCATCACTCTCTATGAAATTAGGCCTAAGAGTTTGTGTTAGCCATCGAGGATCTTCATGGATTCTCATGTTTCTCTTCTTTCACGTTGGTGGTGTTTGGAGGTAGACTTTTCCATCTGGATCTTGTTTTACGCTAATTCTTGCAGAGATTGAGTTTTGTTCTTGGTTGTTCGTGTTCTCCACCCCCCACCCCCCTGTTTTTCTGGTTTTGTTCAGGAATCAGTGGTCGGTGCCTTGGGTTTGAAGAGCATTTTTCCCTATTTGGTTGGCTATATTGTTCTGTTTTTTTTTTTTTTCAAAAAAATCTTCTATCACTCCCTATAGGAGTTTGTATGCTTGAATTCTCGTGTTCTTTTTTATCTATCAATGAAAAGTATGTTTCTTATTCCAGAAAATTTGTCTCTCTACAAATGTTAGTGCCGTGCATTGGTTGCTTAGTCCATATGTATGCATGCTTTACCTGCGTTACCTTGAGTACAGTTCTGTGCTTATAGACATGACAGCGTCATTTCAATTTGCTTTGTTAAATACTGGTTGCATGTTGCTGAGAGTTTGACGTGTTACAAGTTTCAATATCCTTTTTATGAGAAAGCGTGTTATACTTTGATAAGGCAAATGAAAGGTTATCTTTTTTTTTTTTTTTTTTTGGTTACAGATCACAATTGATTGACATTTCCTTCTAAATTATCCTCTCGTGCATTTTTTGATTTTATTTGCTGCTTGAAACCACAAGCCCTGTAATGTTGATTTACATTGCAATAGTAAGATGCAGTTCCTCCTTTCCCATCTTTTCTTGTGACAGTATCTTTGGTGTTATTTCTTTAGTTGGGATTTCATTTGTCTCACTCATTTTTTTATGCCTTGTTTCCCTTATGGGAGTTGGTTTGTTAAGGTCAACATTTGGGAAGAAAGGAAGGTTTTTGGTTCTCGAGGTCAGAATCTTAAGGATGAAATGCTTGGTAAATATCCACCTCCAACTCCATTACCCAGCAGCAATGGCAAGAGTTCAAATCCTAAAAAAATAGTGAAGAGGGATGCCCACTCTGTGAGAATTGTAAGAGCTTGGCTGTGGTAGCAGCGGAATATTGCAGTTTCCATTTTATTTCTTGTGTTATGACCCCTATATTTTTATTGGTTTACTCTAGAAACTGGCTGTTGGAGGTGTTCCAGAGAGGATTCTTACTGCATTTCAATCTGTACTTGATGAACATCTGACTGAGGATGCTGCTCTGAACGACTGTAGTTCTGCTACTCATCATCTGAATCAAATTGAGGAAGACTTGAATGCTTCCTTAGCTCAAGGTATAATCTCATCTACTTTAGTCATCTCATGCAATTTTAGTTTAAGATGTTGTCATGTAAGCCAAGCTTTGCATCATGAAGGTGGTCTTTTGTAAAAGGTGCTAGTCATGCTATATAGACTTTCGATAGAACAAAATAATAAAGTATTTTAGCTTGTAAAGAGTGTGCTATTAAAAATATTTATGATAGGTTCAATTTATACTTTTTCATTAAATCATTGAGAAGTTATCTATGGTTAAAAAAATCTCTTTATTCATGAGAATTGAATATTTTGGTGATGGGCTTTTCTTTCTTATTTATTTTTATTTTTTTACTTTTTGCCTTGTAACGTGATAAGTAGTGTTGGACTTCGCTGTATAGGATATCAGATCAAACTAAATTGAGAATTTGTGCTGTACATAGATCTATGTCCTTAATATCAGTGTTTTAAGATGCATCATAGGCGCTAGGTAACTTGAGGGTACTGAATCAATGATTTAAGAGCCATGCCTAGGTAGGTATACTGCTTCATACCACCTTACCACGACCTGTCTTTTCAGCTCATTACCTGCAACATTTTGACCTGCAATCAGGCTGTTTGCATCATGTCTCCTGTGTAGGCTGTCATTTATCATCTTACGTCCTTCACTGTCCGTCTGCTCGCCCCATCTTCTGTTTGTCAATACAGGGTCTTTGACGGACTTTGTTGTTTGTTATCTCGCTACTTCTTTGTTGGTTGGTTCATTTATGTTTTATAGGTTTGTAGATGTTATGGATTCAAGAAGTTTCAGAACAAATATTTCTGCATTAGCCTTTTTGTCAAAGATTTAAAAAAAGAAGAAGAAATTGGAGTGTTTTTATAGTTTTGTTCCTTATTTCCTTTCACTCTTCTTGGAGTTCGTATCTTTCAAACATCCGTCTCTTTTCATATGTTCGATAAAAAATTCTATTTCTTGTTTTAAAAAGATCTCTGCCTTCTCATGCCCCTAATAACATTATAGCTCCCCAGTTCTAGCAGATTGAAATCCTCCACCACATTCATTATTGAAGGCATACATCCAAATCAGACTCCTGGCTTTGTAGTTTGGAATCATGACTCCTCTGGTATTTTTCTGTGAATTCAGCCATCTGGACTCCTCACACAAGGCTTCATATCTAAATTCTTCCCCAGCTAAACGAATTTGTAAAGGACACAGCCACTTAAGGAGATGCTTTATAGTGGAGTCACTTAACAGCTATTCTATCAAATAATCAGGTGGTTGAATCTTCATGGAAGGATGCAAAGATTCAACCTTTGTAGCCTTAATGAGCATGCTGAGAATGTGATAGAAATCTCCAATCCAAATTGAGTGTTGGAACATTGACCAAATCAACGGGACATCTACCCATATTTTTATTGCTTCGAAACCCTAATTTTATTTCATACGTATCTTATTTTTAAACACCTAATGCCCTCTCTATAGATTGTAATGCAGTGGTCGTAATATTCTCGGGCTTATTTTTTTCTGGCATATAGAATTCCTACTGCTATATTTTTATGCTTGTGTCGTGAGTCCTTATTCCTTGAAACGTATTTTATAAGAGAAACACTCCCTTTACTTTCCTTCCAAAATAGGAACTCAACCAAGGTCTGCATTGCTTGACGACCTTCAAGAGCAGGAAAATGTAATTCAACGATGTATTAGGCAACTCGAAAGTGTTGAGGCAACTAGGGCTTCTTTGGTTTCCTTGCTTGTAGAAGCGCTTCTGGACCAAGTAACTTTCCTTCATCTTTTTTATTTCCTTCAATTATTTATCCTGATTGCAAGCTTCCTCGATATTTTTGAGATACTTACATTGTAAAGTTGATTTCTCTGGGAAAAATTACAGGAATCAAAGCTGGAACTAGTTCGCAATCAGTTGCAGGTAAGATAAACCTCTCTTTATATTTTCTTTTCTGAAGTAGCAAGAGTCTAGGTTTGGGATCACCTGTTGGCCTAAAGTTAGTTTGAAGGTGGGTTGATATGTCCTTAATACCTTGAAATTGGATGTCAAAACGTTAAAACTTTGGTACGCCTTGAAACATTTAAATCAGAGGACCAGATTAATATAATTCTTTCATTGTAGACACATGGTGGTGGTGGACATAGACACCCTTGAGCAAGTGATCACAATAAGAATTTTACTGTAGCACGTACGTATAGGAGAAAGATCAAACTGAATGAACTTGTTGAAGTGTATAGTTATGTGGACACATTTGATTTTAGGGGTCTTTTTAAGTTTGATGTAAGTTTGACTGTATCCATCTCTGTCAACTTGTTGATTGTTTTCTACCATTCACATGGACGGAGATCTAATATGAAATATATCACGTATTTTGGGGAACGTAAAACAATTAGCTTTAGAGTTCGGCATTTTCTAATTTCAGTTTGCTTATGTATGTTGGAAATTATTGCTTATGACTCTGCAGATTGCTCGATCTCAAATTGAGCTAGCAAGTAATGTTCGGAAGAGATCTACTTCGACTACCGTTCCTGGTCCTTCAGCTACTAACATTAATGTACCGACAGAAACGACCCATGTGATTGATACTAAGTTATCTTCTGTCCAACAGAACGCAATCGCTTCTCCTGTCCAGGCTATGGTTTCCTTTGCTGGTCCAAAAACCAGTGAAGATGAAACGAAGAGAGCAGCTGCTGCTGCTGTTGCTGCGAAGTTGGCTGCTTCTACATCTTCGGCACAGATGCTTACCTCTGTTCTTTCATCCCTTGTTGCAGAAGAAGCTGCTTCCATGAATGGTAGCCTAAAATCATCTGGGTTTGCTTCATTGTCCATACTCCCCTCTGAGAAACGACAGAAAATTGAGAAGCCAATGCCTATATCCGATGTCAGCAGTTCAGATGGTATTGGCGCATCATTCATTACACCTATGCAACAACAACAATTGGCAAGTGTGCCTCTTGCACAATCAGCAAACGGGCAACCTGTATCCCAGGCGAACCTATGTCAAGCTTCATTTGCTCCACCACCTCCACCAGCACCACCATCTTTATCCTCAACTCCATCGGTGAATCAATATGGGCAGTCTGGTGGATTAATGGGGGTATCACCGTATAGTTTTGGAGCATATTCTCTACCACCTCCACCTCCTTTGCCTCCTCATATTGCAATGGGTTTGAGTAGGCCAATGTCTCAGCCGCCTCAGCAGCAGCCTCAGCCTCAGCTGACACTGCCTACTTCAGCAGGATTTTATCGGCCACCAGGTATAGGTTTTTATGGGCAAGGCCAGCAGTCGACGCCGCCACCCGTTCCTAGGCAGTAAGTTTCCAGGTAGAATTTACTTGGGCCAAATCTTCACTCAAGGATTAATAGCTTTAATGGGTCAAATTGGCCATACCATTTCTACTTGCCAATTGAGAGTTCATTTCAGAATTTGTATTATCATGTAAATTAGTAGATTTCTTTTTGGTCTGTAGAAGTTTTAGTATGTCTTCTCCTGCAAACAATCTAAAAGAGCATGTTGCAGCTGAGGTTGGTCCATGCTGATAGCATACATTAGGCTTTTCTAATGTAATGCTATCAAAAATTGGAAAGCTCGGTGGAGTCTCGGTTACCTCGAAAATTTTACTGTGGCAAGGTAAGCAGCTCTTGGCCCTGTGTGGAAGCTGGTTAGAGTACTGTAGTACTGCTTAGAAGATTTTTAGTTGACATGTTAGAGATTCAGCTTTGAAGACGCTTTGGCTTTATATCTGGCTGGATAGAGTAGGGAAATAGACTTATTTGGATAGCAATAACAGGGATGATATTGGTCTGTAATATAACTTGGTGAGGCCATGAAAATTACAAGTTGTTAACACAGCAGTGCCATAGTTTTGTAATCTGTTGCTCTGTTTTCTTATTATTCAGTAGAGAACTCTTATTTAAAATAAA

mRNA sequence

ATGAACAACGAGGTTTTTGAAGCGCAGGTATTGGGTGAGAAGTTATCCAAGCTCAACAATTCTCAGCAGAGCATTGAGTCTTTATCAAGATGGTGCATTTCCCACCGGAAAAAGGCCAAGCAGATTGTTGAAACTTGGGATAAATTATTCAACTCATCTCAGCAAGAGCAGCGTGTTTCATTTCTGTATTTGGCAAATGACATTTTGCAAAACAGCAGGCGCAAGGGAAGTGAATTTGTGAATGAATTCTGGAAAGTTCTTCCTGGTGCTCTCAAGTATGTCTACGATCAAGGCGATGAAAGTGGAAAGAAAGCAGCTGCTAGACTTGTCAACATTTGGGAAGAAAGGAAGGTTTTTGGTTCTCGAGGTCAGAATCTTAAGGATGAAATGCTTGGTAAATATCCACCTCCAACTCCATTACCCAGCAGCAATGGCAAGAGTTCAAATCCTAAAAAAATAGTGAAGAGGGATGCCCACTCTGTGAGAATTAAACTGGCTGTTGGAGGTGTTCCAGAGAGGATTCTTACTGCATTTCAATCTGTACTTGATGAACATCTGACTGAGGATGCTGCTCTGAACGACTGTAGTTCTGCTACTCATCATCTGAATCAAATTGAGGAAGACTTGAATGCTTCCTTAGCTCAAGGAACTCAACCAAGGTCTGCATTGCTTGACGACCTTCAAGAGCAGGAAAATGTAATTCAACGATGTATTAGGCAACTCGAAAGTGTTGAGGCAACTAGGGCTTCTTTGGTTTCCTTGCTTGTAGAAGCGCTTCTGGACCAAGAATCAAAGCTGGAACTAGTTCGCAATCAGTTGCAGATTGCTCGATCTCAAATTGAGCTAGCAAGTAATGTTCGGAAGAGATCTACTTCGACTACCGTTCCTGGTCCTTCAGCTACTAACATTAATGTACCGACAGAAACGACCCATGTGATTGATACTAAGTTATCTTCTGTCCAACAGAACGCAATCGCTTCTCCTGTCCAGGCTATGGTTTCCTTTGCTGGTCCAAAAACCAGTGAAGATGAAACGAAGAGAGCAGCTGCTGCTGCTGTTGCTGCGAAGTTGGCTGCTTCTACATCTTCGGCACAGATGCTTACCTCTGTTCTTTCATCCCTTGTTGCAGAAGAAGCTGCTTCCATGAATGGTAGCCTAAAATCATCTGGGTTTGCTTCATTGTCCATACTCCCCTCTGAGAAACGACAGAAAATTGAGAAGCCAATGCCTATATCCGATGTCAGCAGTTCAGATGGTATTGGCGCATCATTCATTACACCTATGCAACAACAACAATTGGCAAGTGTGCCTCTTGCACAATCAGCAAACGGGCAACCTGTATCCCAGGCGAACCTATGTCAAGCTTCATTTGCTCCACCACCTCCACCAGCACCACCATCTTTATCCTCAACTCCATCGGTGAATCAATATGGGCAGTCTGGTGGATTAATGGGGGTATCACCGTATAGTTTTGGAGCATATTCTCTACCACCTCCACCTCCTTTGCCTCCTCATATTGCAATGGGTTTGAGTAGGCCAATGTCTCAGCCGCCTCAGCAGCAGCCTCAGCCTCAGCTGACACTGCCTACTTCAGCAGGATTTTATCGGCCACCAGGTATAGGTTTTTATGGGCAAGGCCAGCAGTCGACGCCGCCACCCGTTCCTAGGCAGTAAGTTTCCAGGTAGAATTTACTTGGGCCAAATCTTCACTCAAGGATTAATAGCTTTAATGGGTCAAATTGGCCATACCATTTCTACTTGCCAATTGAGAGTTCATTTCAGAATTTGTATTATCATGTAAATTAGTAGATTTCTTTTTGGTCTGTAGAAGTTTTAGTATGTCTTCTCCTGCAAACAATCTAAAAGAGCATGTTGCAGCTGAGGTTGGTCCATGCTGATAGCATACATTAGGCTTTTCTAATGTAATGCTATCAAAAATTGGAAAGCTCGGTGGAGTCTCGGTTACCTCGAAAATTTTACTGTGGCAAGGTAAGCAGCTCTTGGCCCTGTGTGGAAGCTGGTTAGAGTACTGTAGTACTGCTTAGAAGATTTTTAGTTGACATGTTAGAGATTCAGCTTTGAAGACGCTTTGGCTTTATATCTGGCTGGATAGAGTAGGGAAATAGACTTATTTGGATAGCAATAACAGGGATGATATTGGTCTGTAATATAACTTGGTGAGGCCATGAAAATTACAAGTTGTTAACACAGCAGTGCCATAGTTTTGTAATCTGTTGCTCTGTTTTCTTATTATTCAGTAGAGAACTCTTATTTAAAATAAA

Coding sequence (CDS)

ATGAACAACGAGGTTTTTGAAGCGCAGGTATTGGGTGAGAAGTTATCCAAGCTCAACAATTCTCAGCAGAGCATTGAGTCTTTATCAAGATGGTGCATTTCCCACCGGAAAAAGGCCAAGCAGATTGTTGAAACTTGGGATAAATTATTCAACTCATCTCAGCAAGAGCAGCGTGTTTCATTTCTGTATTTGGCAAATGACATTTTGCAAAACAGCAGGCGCAAGGGAAGTGAATTTGTGAATGAATTCTGGAAAGTTCTTCCTGGTGCTCTCAAGTATGTCTACGATCAAGGCGATGAAAGTGGAAAGAAAGCAGCTGCTAGACTTGTCAACATTTGGGAAGAAAGGAAGGTTTTTGGTTCTCGAGGTCAGAATCTTAAGGATGAAATGCTTGGTAAATATCCACCTCCAACTCCATTACCCAGCAGCAATGGCAAGAGTTCAAATCCTAAAAAAATAGTGAAGAGGGATGCCCACTCTGTGAGAATTAAACTGGCTGTTGGAGGTGTTCCAGAGAGGATTCTTACTGCATTTCAATCTGTACTTGATGAACATCTGACTGAGGATGCTGCTCTGAACGACTGTAGTTCTGCTACTCATCATCTGAATCAAATTGAGGAAGACTTGAATGCTTCCTTAGCTCAAGGAACTCAACCAAGGTCTGCATTGCTTGACGACCTTCAAGAGCAGGAAAATGTAATTCAACGATGTATTAGGCAACTCGAAAGTGTTGAGGCAACTAGGGCTTCTTTGGTTTCCTTGCTTGTAGAAGCGCTTCTGGACCAAGAATCAAAGCTGGAACTAGTTCGCAATCAGTTGCAGATTGCTCGATCTCAAATTGAGCTAGCAAGTAATGTTCGGAAGAGATCTACTTCGACTACCGTTCCTGGTCCTTCAGCTACTAACATTAATGTACCGACAGAAACGACCCATGTGATTGATACTAAGTTATCTTCTGTCCAACAGAACGCAATCGCTTCTCCTGTCCAGGCTATGGTTTCCTTTGCTGGTCCAAAAACCAGTGAAGATGAAACGAAGAGAGCAGCTGCTGCTGCTGTTGCTGCGAAGTTGGCTGCTTCTACATCTTCGGCACAGATGCTTACCTCTGTTCTTTCATCCCTTGTTGCAGAAGAAGCTGCTTCCATGAATGGTAGCCTAAAATCATCTGGGTTTGCTTCATTGTCCATACTCCCCTCTGAGAAACGACAGAAAATTGAGAAGCCAATGCCTATATCCGATGTCAGCAGTTCAGATGGTATTGGCGCATCATTCATTACACCTATGCAACAACAACAATTGGCAAGTGTGCCTCTTGCACAATCAGCAAACGGGCAACCTGTATCCCAGGCGAACCTATGTCAAGCTTCATTTGCTCCACCACCTCCACCAGCACCACCATCTTTATCCTCAACTCCATCGGTGAATCAATATGGGCAGTCTGGTGGATTAATGGGGGTATCACCGTATAGTTTTGGAGCATATTCTCTACCACCTCCACCTCCTTTGCCTCCTCATATTGCAATGGGTTTGAGTAGGCCAATGTCTCAGCCGCCTCAGCAGCAGCCTCAGCCTCAGCTGACACTGCCTACTTCAGCAGGATTTTATCGGCCACCAGGTATAGGTTTTTATGGGCAAGGCCAGCAGTCGACGCCGCCACCCGTTCCTAGGCAGTAA

Protein sequence

MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVSFLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFGSRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQSVLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQLESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSATNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAASTSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGIGASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYGQSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQPQPQLTLPTSAGFYRPPGIGFYGQGQQSTPPPVPRQ

Homology

[Close]

BLAST of CmaCh14G004700 vs. ExPASy Swiss-Prot
Match: Q9NQG5 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9606 GN=RPRD1B PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 4.9e-25
Identity = 100/305 (32.79%), Postives = 153/305 (50.16%), Query Frame = 0


Query: 6   FEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVSFLYLA 65
           F    L +KLS+L+NSQQS+++LS W I HRK A  IV  W +    ++  ++++FLYLA
Sbjct: 4   FSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLA 63

Query: 66  NDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFGSRG-Q 125
           ND++QNS+RKG EF  EF  VL  A  +V  + DE  KK   RL+NIW+ER V+G    Q
Sbjct: 64  NDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQ 123

Query: 126 NLKDEML-GKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKL---AVGGVPERILTAFQS 185
            LK  M   K PPP        K++  KK +KR    ++ +      G    +  +A   
Sbjct: 124 QLKLSMEDSKSPPP--------KATEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPL 183

Query: 186 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQE-------NV 245
           + +E +    AL D  +A      + + + ASL Q  Q  S LL+ + ++E        V
Sbjct: 184 LTEELI---KALQDLENAASGDATVRQKI-ASLPQEVQDVS-LLEKITDKEAAERLSKTV 243

Query: 246 IQRCI------RQLESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVR 293
            + C+       +L +    R  L  +LVE   +Q+  L     +L+  + ++   + VR
Sbjct: 244 DEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVR 295

[Close]

BLAST of CmaCh14G004700 vs. ExPASy Swiss-Prot
Match: Q9CSU0 (Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=10090 GN=Rprd1b PE=1 SV=2)

HSP 1 Score: 117.5 bits (293), Expect = 4.9e-25
Identity = 100/305 (32.79%), Postives = 153/305 (50.16%), Query Frame = 0


Query: 6   FEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVSFLYLA 65
           F    L +KLS+L+NSQQS+++LS W I HRK A  IV  W +    ++  ++++FLYLA
Sbjct: 4   FSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLA 63

Query: 66  NDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFGSRG-Q 125
           ND++QNS+RKG EF  EF  VL  A  +V  + DE  KK   RL+NIW+ER V+G    Q
Sbjct: 64  NDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQ 123

Query: 126 NLKDEML-GKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKL---AVGGVPERILTAFQS 185
            LK  M   K PPP        K++  KK +KR    ++ +      G    +  +A   
Sbjct: 124 QLKLSMEDSKSPPP--------KAAEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPL 183

Query: 186 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQE-------NV 245
           + +E +    AL D  +A      + + + ASL Q  Q  S LL+ + ++E        V
Sbjct: 184 LTEELI---KALQDLENAASGDATVRQKI-ASLPQEVQDVS-LLEKITDKEAAERLSKTV 243

Query: 246 IQRCI------RQLESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVR 293
            + C+       +L +    R  L  +LVE   +Q+  L     +L+  + ++   + VR
Sbjct: 244 DEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKEVLSEKEKKLEEYKQKLARVTQVR 295

[Close]

BLAST of CmaCh14G004700 vs. ExPASy Swiss-Prot
Match: Q0P5J9 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=9913 GN=RPRD1A PE=2 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 2.7e-23
Identity = 93/317 (29.34%), Postives = 160/317 (50.47%), Query Frame = 0


Query: 6   FEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVSFLYLA 65
           F    L +KLS+L+NSQQS+++LS W I HRK ++ IV  W++    ++  ++++FLYLA
Sbjct: 4   FSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLA 63

Query: 66  NDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFGSRG-Q 125
           ND++QNS+RKG EF  +F  V+  A K+V  + DES KK   R+++IWEER V+ +   +
Sbjct: 64  NDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLE 123

Query: 126 NLKDEMLGKYPP-----------PTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGG---V 185
            LK  + G   P                SS G  S P + +        ++ A  G   V
Sbjct: 124 QLKQALYGDKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAV 183

Query: 186 PERILTAFQSVLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQ 245
            +RI +    V +  L +   + D  S    L+++ ED    LA      +A +DD ++ 
Sbjct: 184 HQRIASLPVEVQEVSLLD--KITDKESG-ERLSKMVEDACMLLADYNGRLAAEIDDRKQL 243

Query: 246 ENVIQRCIRQLESVEATRASLVSLLVEALLDQESKLELVRNQL-QIARSQIELASNVRKR 305
             ++              A  +    EAL ++E KLE  + +L +++  + EL S ++  
Sbjct: 244 TRML--------------ADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSL 303

Query: 306 STSTTVPGPSATNINVP 307
              + +P  + +++++P
Sbjct: 304 PDLSRLPNVTGSHMHLP 303

[Close]

BLAST of CmaCh14G004700 vs. ExPASy Swiss-Prot
Match: Q96P16 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9606 GN=RPRD1A PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.7e-23
Identity = 93/317 (29.34%), Postives = 160/317 (50.47%), Query Frame = 0


Query: 6   FEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVSFLYLA 65
           F    L +KLS+L+NSQQS+++LS W I HRK ++ IV  W++    ++  ++++FLYLA
Sbjct: 4   FSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLA 63

Query: 66  NDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFGSRG-Q 125
           ND++QNS+RKG EF  +F  V+  A K+V  + DES KK   R+++IWEER V+ +   +
Sbjct: 64  NDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLE 123

Query: 126 NLKDEMLGKYPP-----------PTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGG---V 185
            LK  + G   P                SS G  S P + +        ++ A  G   V
Sbjct: 124 QLKQALYGDKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAV 183

Query: 186 PERILTAFQSVLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQ 245
            +RI +    V +  L +   + D  S    L+++ ED    LA      +A +DD ++ 
Sbjct: 184 HQRIASLPVEVQEVSLLD--KITDKESG-ERLSKMVEDACMLLADYNGRLAAEIDDRKQL 243

Query: 246 ENVIQRCIRQLESVEATRASLVSLLVEALLDQESKLELVRNQL-QIARSQIELASNVRKR 305
             ++              A  +    EAL ++E KLE  + +L +++  + EL S ++  
Sbjct: 244 TRML--------------ADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSL 303

Query: 306 STSTTVPGPSATNINVP 307
              + +P  + +++++P
Sbjct: 304 PDLSRLPNVTGSHMHLP 303

[Close]

BLAST of CmaCh14G004700 vs. ExPASy Swiss-Prot
Match: Q5R8Y3 (Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9601 GN=RPRD1A PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.7e-23
Identity = 93/317 (29.34%), Postives = 160/317 (50.47%), Query Frame = 0


Query: 6   FEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVSFLYLA 65
           F    L +KLS+L+NSQQS+++LS W I HRK ++ IV  W++    ++  ++++FLYLA
Sbjct: 4   FSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLA 63

Query: 66  NDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFGSRG-Q 125
           ND++QNS+RKG EF  +F  V+  A K+V  + DES KK   R+++IWEER V+ +   +
Sbjct: 64  NDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLE 123

Query: 126 NLKDEMLGKYPP-----------PTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGG---V 185
            LK  + G   P                SS G  S P + +        ++ A  G   V
Sbjct: 124 QLKQALYGDKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAV 183

Query: 186 PERILTAFQSVLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQ 245
            +RI +    V +  L +   + D  S    L+++ ED    LA      +A +DD ++ 
Sbjct: 184 HQRIASLPVEVQEVSLLD--KITDKESG-ERLSKMVEDACMLLADYNGRLAAEIDDRKQL 243

Query: 246 ENVIQRCIRQLESVEATRASLVSLLVEALLDQESKLELVRNQL-QIARSQIELASNVRKR 305
             ++              A  +    EAL ++E KLE  + +L +++  + EL S ++  
Sbjct: 244 TRML--------------ADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSL 303

Query: 306 STSTTVPGPSATNINVP 307
              + +P  + +++++P
Sbjct: 304 PDLSRLPNVTGSHMHLP 303

[Close]

BLAST of CmaCh14G004700 vs. ExPASy TrEMBL
Match: A0A6J1J690 (regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481606 PE=4 SV=1)

HSP 1 Score: 1042.0 bits (2693), Expect = 9.2e-301
Identity = 557/557 (100.00%), Postives = 557/557 (100.00%), Query Frame = 0


Query: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60
           MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS
Sbjct: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60

Query: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120
           FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG
Sbjct: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120

Query: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180
           SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS
Sbjct: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180

Query: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240
           VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ
Sbjct: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240

Query: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300
           LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA
Sbjct: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300

Query: 301 TNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAAS 360
           TNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAAS
Sbjct: 301 TNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAAS 360

Query: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGI 420
           TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGI
Sbjct: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGI 420

Query: 421 GASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYGQS 480
           GASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYGQS
Sbjct: 421 GASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYGQS 480

Query: 481 GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQPQPQLTLPTSAGFYRPPGI 540
           GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQPQPQLTLPTSAGFYRPPGI
Sbjct: 481 GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQPQPQLTLPTSAGFYRPPGI 540

Query: 541 GFYGQGQQSTPPPVPRQ 558
           GFYGQGQQSTPPPVPRQ
Sbjct: 541 GFYGQGQQSTPPPVPRQ 557

[Close]

BLAST of CmaCh14G004700 vs. ExPASy TrEMBL
Match: A0A6J1F335 (UPF0400 protein C337.03-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441698 PE=4 SV=1)

HSP 1 Score: 1005.4 bits (2598), Expect = 9.5e-290
Identity = 542/559 (96.96%), Postives = 545/559 (97.50%), Query Frame = 0


Query: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60
           MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRK+AKQIVETWDKLFNSSQQEQRVS
Sbjct: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKRAKQIVETWDKLFNSSQQEQRVS 60

Query: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120
           FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDE+GKKAAARLVNIWEERKVFG
Sbjct: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDENGKKAAARLVNIWEERKVFG 120

Query: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180
           SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS
Sbjct: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180

Query: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240
           VLDEHL EDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ
Sbjct: 181 VLDEHLNEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240

Query: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300
           LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTST VPGPSA
Sbjct: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTPVPGPSA 300

Query: 301 TNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAAS 360
           T INVPTETTHVIDTKL SVQQNAIASPVQAM SFAGPKTSEDETKRAAAAAVAAKLAAS
Sbjct: 301 TTINVPTETTHVIDTKLPSVQQNAIASPVQAMASFAGPKTSEDETKRAAAAAVAAKLAAS 360

Query: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGI 420
           TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSI PSEKRQK+EKPMPISDVS SDGI
Sbjct: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSIFPSEKRQKLEKPMPISDVSGSDGI 420

Query: 421 GASFITPM--QQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYG 480
           GASFITPM  QQQQL SVPLAQSANGQPVSQAN CQASFAPPPPPAPPSLSSTP VNQY 
Sbjct: 421 GASFITPMQQQQQQLTSVPLAQSANGQPVSQANPCQASFAPPPPPAPPSLSSTPPVNQYA 480

Query: 481 QSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQPQPQLTLPTSAGFYRPP 540
           QSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQ QPQLTLPTSAGFYRPP
Sbjct: 481 QSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQ-QPQLTLPTSAGFYRPP 540

Query: 541 GIGFYGQGQQSTPPPVPRQ 558
           GIGFYGQGQQSTPPPVPRQ
Sbjct: 541 GIGFYGQGQQSTPPPVPRQ 558

[Close]

BLAST of CmaCh14G004700 vs. ExPASy TrEMBL
Match: A0A1S3B7H0 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucumis melo OX=3656 GN=LOC103486842 PE=4 SV=1)

HSP 1 Score: 901.7 bits (2329), Expect = 1.5e-258
Identity = 493/561 (87.88%), Postives = 514/561 (91.62%), Query Frame = 0


Query: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60
           MNNEVFEAQVL EKLSKLNNSQQSIESLS+WCISHRKKAKQIVETWDKLFNSSQ+EQRVS
Sbjct: 1   MNNEVFEAQVLAEKLSKLNNSQQSIESLSKWCISHRKKAKQIVETWDKLFNSSQKEQRVS 60

Query: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120
           FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYD GDESGKKA ARLVNIWEERKVFG
Sbjct: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDHGDESGKKAVARLVNIWEERKVFG 120

Query: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180
           SRGQ+LKDEMLGK PPPTPLPSSNGKSSNP KIVKRDAHSVRIKLAVGGVPE+ILTAFQS
Sbjct: 121 SRGQSLKDEMLGKNPPPTPLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQS 180

Query: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240
           VLDEHL EDAALN+CSSATHHLNQIEEDLN SLAQGTQPRS LLDDLQ+QE VIQ CIRQ
Sbjct: 181 VLDEHLNEDAALNNCSSATHHLNQIEEDLNVSLAQGTQPRSGLLDDLQDQETVIQECIRQ 240

Query: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300
           LE VEATRASLVSLLVEAL DQESKLELVRNQLQ+ARSQIELASNVRKR TSTT PGPSA
Sbjct: 241 LEGVEATRASLVSLLVEALQDQESKLELVRNQLQVARSQIELASNVRKRFTSTTAPGPSA 300

Query: 301 TNINVPTETTHVIDTKLSSVQQNAIASP---VQAMVSFAGPKTSEDETKRAAAAAVAAKL 360
           T I++ TE THV DTKLSSVQQN I+S    VQAM SF GPKTSE+E KRAAAAAVAAKL
Sbjct: 301 TTIDLLTEMTHVTDTKLSSVQQNIISSQPPLVQAMGSFPGPKTSEEENKRAAAAAVAAKL 360

Query: 361 AASTSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSS 420
           AASTSSAQMLTSVLSSLVAEEAASMNG LKSSGF+SL     EKRQK+EKPMPISDVSSS
Sbjct: 361 AASTSSAQMLTSVLSSLVAEEAASMNGGLKSSGFSSL--FSPEKRQKLEKPMPISDVSSS 420

Query: 421 DGIGASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQY 480
           DG+GASF+ PM QQQ+ S+PLAQSANGQPVSQAN  QASFAPPPPP PPSLSSTP VNQY
Sbjct: 421 DGVGASFVAPM-QQQMTSMPLAQSANGQPVSQANPSQASFAPPPPPVPPSLSSTPPVNQY 480

Query: 481 GQSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQPQ-PQLTLPTSAGFYR 540
            QSGGL+GV PY+FGAYSLPPPPPLPPHIAMGLSRP SQPP QQ Q PQ + PTS+GFYR
Sbjct: 481 AQSGGLIGVLPYNFGAYSLPPPPPLPPHIAMGLSRPTSQPPPQQLQPPQQSQPTSSGFYR 540

Query: 541 PPGIGFYGQGQQSTPPPVPRQ 558
           PPGIGFYGQGQQSTPPPVPRQ
Sbjct: 541 PPGIGFYGQGQQSTPPPVPRQ 558

[Close]

BLAST of CmaCh14G004700 vs. ExPASy TrEMBL
Match: A0A6J1DF20 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Momordica charantia OX=3673 GN=LOC111019832 PE=4 SV=1)

HSP 1 Score: 871.7 bits (2251), Expect = 1.6e-249
Identity = 485/561 (86.45%), Postives = 506/561 (90.20%), Query Frame = 0


Query: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60
           MNNE FEAQ+L +KLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQ+EQRVS
Sbjct: 1   MNNEGFEAQLLADKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQKEQRVS 60

Query: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120
           FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYD GD+SGKKA ARLV+IWEERKVFG
Sbjct: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDHGDDSGKKAVARLVDIWEERKVFG 120

Query: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180
           SRGQ+LKDEMLGK PP  PLPSSNGKSSNP KIVKRDAHSVRIKLAVGGVPE+ILTAFQS
Sbjct: 121 SRGQSLKDEMLGKNPP--PLPSSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQS 180

Query: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240
           VLDEHL ED ALN+CSSATHHLNQIEEDLNA+LAQGTQPRSALLDDLQEQE+VIQ+CI Q
Sbjct: 181 VLDEHLNEDTALNNCSSATHHLNQIEEDLNATLAQGTQPRSALLDDLQEQESVIQQCIGQ 240

Query: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300
           LESVEATR SLVSLLVEAL DQESKLELVRNQLQIARSQIELASNVRKR T T VPGP A
Sbjct: 241 LESVEATRGSLVSLLVEALQDQESKLELVRNQLQIARSQIELASNVRKRLT-TPVPGPLA 300

Query: 301 TNINVPTETTHVIDTKLSSVQQNAIASP---VQAMVSFAGPKTSEDETKRAAAAAVAAKL 360
             I++ TE THV DTKL+SVQ N I+S    VQAMVSFAGPKTSE+E KRAAAAAVAAKL
Sbjct: 301 ATIDLLTEMTHVADTKLTSVQSNTISSQSPLVQAMVSFAGPKTSEEENKRAAAAAVAAKL 360

Query: 361 AASTSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSS 420
           AASTSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASL I   EKRQK+EKPMPISDV+SS
Sbjct: 361 AASTSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLPIFSPEKRQKLEKPMPISDVNSS 420

Query: 421 DGIGASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQY 480
           D IG SF+T MQQQQL SV LAQSAN QPVSQAN  QASF PPPPPAPPSLSST  VN Y
Sbjct: 421 DSIG-SFVTSMQQQQLTSVALAQSANVQPVSQANPSQASFTPPPPPAPPSLSSTTPVNPY 480

Query: 481 GQSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQP-QPQLTLPTSAGFYR 540
            QSG LMGV PY FGAYSLPPPPPLPPHIAMGL+RP SQPPQQQP QPQ + PTS GFYR
Sbjct: 481 PQSGALMGVLPYGFGAYSLPPPPPLPPHIAMGLTRPTSQPPQQQPQQPQQSQPTSGGFYR 540

Query: 541 PPGIGFYGQGQQSTPPPVPRQ 558
           PPGIGFYGQ QQSTPPPVPRQ
Sbjct: 541 PPGIGFYGQSQQSTPPPVPRQ 557

[Close]

BLAST of CmaCh14G004700 vs. ExPASy TrEMBL
Match: A0A6J1I2G4 (regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111470291 PE=4 SV=1)

HSP 1 Score: 866.3 bits (2237), Expect = 6.9e-248
Identity = 483/563 (85.79%), Postives = 506/563 (89.88%), Query Frame = 0


Query: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60
           MNNE FEAQVL EKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQ+EQRVS
Sbjct: 1   MNNEGFEAQVLSEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQKEQRVS 60

Query: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120
           FLYLANDILQNSRRKGSEFVNEFWKVLP +LKYVYD GDESGKKA ARLV+IWEERKVFG
Sbjct: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPVSLKYVYDHGDESGKKAVARLVDIWEERKVFG 120

Query: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180
           SRGQ+LKDEMLGK PP  PLP+SNGKSSNP KIVKRDAHSVRIKLAVGGVPE+ILTAFQS
Sbjct: 121 SRGQSLKDEMLGKNPP--PLPNSNGKSSNPIKIVKRDAHSVRIKLAVGGVPEKILTAFQS 180

Query: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240
           VLDEHL EDAALN+CSSATHHLNQIEEDLNAS+AQGTQPRSALLDDLQEQENV+Q+CI Q
Sbjct: 181 VLDEHLNEDAALNNCSSATHHLNQIEEDLNASIAQGTQPRSALLDDLQEQENVVQQCIGQ 240

Query: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300
           LESVEATRASLVSLLVEAL DQESKLELVRNQLQIARSQIELASNVRKR  S  VPGP A
Sbjct: 241 LESVEATRASLVSLLVEALQDQESKLELVRNQLQIARSQIELASNVRKRIAS-PVPGPLA 300

Query: 301 TNINVPTETTHVIDTKLSSVQQNAIASP---VQAMVSFAGPKTSEDETKRAAAAAVAAKL 360
           T+I++ TE THV D KLSS Q N I+S    VQAMVS AGPK+SE+E KRAAAAAVAAKL
Sbjct: 301 TSIDLLTEMTHVTDAKLSSAQSNTISSQSPLVQAMVSSAGPKSSEEENKRAAAAAVAAKL 360

Query: 361 AASTSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSS 420
           AASTSSAQMLTSVLSSLVAEEAASMNG LKS+GFASLSI   EKRQK+EKPMPISD  SS
Sbjct: 361 AASTSSAQMLTSVLSSLVAEEAASMNGGLKSAGFASLSIFSPEKRQKLEKPMPISD--SS 420

Query: 421 DGIGASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQY 480
           DGIGASF+TPMQQQQL +V LAQSAN QPVSQAN  QASFAPPPPPAPP       VNQY
Sbjct: 421 DGIGASFVTPMQQQQLTNVALAQSANIQPVSQANQSQASFAPPPPPAPP-------VNQY 480

Query: 481 GQSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQP---QPQLTLPTSAGF 540
            QSGG+MGV PY+FGAYSLPPPPPLPPHI MGLSRP SQPPQQQP   QPQ + PTSAGF
Sbjct: 481 AQSGGIMGVLPYNFGAYSLPPPPPLPPHIVMGLSRPTSQPPQQQPQPQQPQQSQPTSAGF 540

Query: 541 YRPPGIGFYGQGQQSTPPPVPRQ 558
           YRPPGIGFYGQGQQSTPPPVPRQ
Sbjct: 541 YRPPGIGFYGQGQQSTPPPVPRQ 551

[Close]

BLAST of CmaCh14G004700 vs. NCBI nr
Match: XP_022982898.1 (regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1042.0 bits (2693), Expect = 1.9e-300
Identity = 557/557 (100.00%), Postives = 557/557 (100.00%), Query Frame = 0


Query: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60
           MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS
Sbjct: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60

Query: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120
           FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG
Sbjct: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120

Query: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180
           SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS
Sbjct: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180

Query: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240
           VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ
Sbjct: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240

Query: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300
           LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA
Sbjct: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300

Query: 301 TNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAAS 360
           TNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAAS
Sbjct: 301 TNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAAS 360

Query: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGI 420
           TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGI
Sbjct: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGI 420

Query: 421 GASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYGQS 480
           GASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYGQS
Sbjct: 421 GASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYGQS 480

Query: 481 GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQPQPQLTLPTSAGFYRPPGI 540
           GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQPQPQLTLPTSAGFYRPPGI
Sbjct: 481 GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQPQPQLTLPTSAGFYRPPGI 540

Query: 541 GFYGQGQQSTPPPVPRQ 558
           GFYGQGQQSTPPPVPRQ
Sbjct: 541 GFYGQGQQSTPPPVPRQ 557

[Close]

BLAST of CmaCh14G004700 vs. NCBI nr
Match: XP_023526660.1 (UPF0400 protein C337.03-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1007.3 bits (2603), Expect = 5.2e-290
Identity = 541/560 (96.61%), Postives = 545/560 (97.32%), Query Frame = 0


Query: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60
           MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRK+AKQIVETWDKLFNSSQQEQRVS
Sbjct: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKRAKQIVETWDKLFNSSQQEQRVS 60

Query: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120
           FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDE+GKKAAARLVNIWEERKVFG
Sbjct: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDENGKKAAARLVNIWEERKVFG 120

Query: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180
           SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS
Sbjct: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180

Query: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240
           VLDEHL EDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ
Sbjct: 181 VLDEHLNEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240

Query: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300
           LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTST VPGPSA
Sbjct: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTQVPGPSA 300

Query: 301 TNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAAS 360
           T INVPTETTHVIDTKL SVQQNAIASPVQAM SFAGPKTSEDETKRAAAAAVAAKLAAS
Sbjct: 301 TTINVPTETTHVIDTKLPSVQQNAIASPVQAMASFAGPKTSEDETKRAAAAAVAAKLAAS 360

Query: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGI 420
           TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSI PSEKRQK+EKPMPISDVS SDGI
Sbjct: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSIFPSEKRQKLEKPMPISDVSGSDGI 420

Query: 421 GASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYGQS 480
           GASFITPMQQQQL SVPLAQSANGQPVSQAN CQASFAPPPPPAPPSLSSTP VNQY QS
Sbjct: 421 GASFITPMQQQQLTSVPLAQSANGQPVSQANPCQASFAPPPPPAPPSLSSTPPVNQYAQS 480

Query: 481 GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPP---QQQPQPQLTLPTSAGFYRP 540
           GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPP   QQQ QPQL+LPTSAGFYRP
Sbjct: 481 GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQQQQQQPQLSLPTSAGFYRP 540

Query: 541 PGIGFYGQGQQSTPPPVPRQ 558
           PGIGFYGQGQQSTPPPVPRQ
Sbjct: 541 PGIGFYGQGQQSTPPPVPRQ 560

[Close]

BLAST of CmaCh14G004700 vs. NCBI nr
Match: XP_022934552.1 (UPF0400 protein C337.03-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1005.4 bits (2598), Expect = 2.0e-289
Identity = 542/559 (96.96%), Postives = 545/559 (97.50%), Query Frame = 0


Query: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60
           MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRK+AKQIVETWDKLFNSSQQEQRVS
Sbjct: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKRAKQIVETWDKLFNSSQQEQRVS 60

Query: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120
           FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDE+GKKAAARLVNIWEERKVFG
Sbjct: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDENGKKAAARLVNIWEERKVFG 120

Query: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180
           SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS
Sbjct: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180

Query: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240
           VLDEHL EDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ
Sbjct: 181 VLDEHLNEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240

Query: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300
           LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTST VPGPSA
Sbjct: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTPVPGPSA 300

Query: 301 TNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAAS 360
           T INVPTETTHVIDTKL SVQQNAIASPVQAM SFAGPKTSEDETKRAAAAAVAAKLAAS
Sbjct: 301 TTINVPTETTHVIDTKLPSVQQNAIASPVQAMASFAGPKTSEDETKRAAAAAVAAKLAAS 360

Query: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGI 420
           TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSI PSEKRQK+EKPMPISDVS SDGI
Sbjct: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSIFPSEKRQKLEKPMPISDVSGSDGI 420

Query: 421 GASFITPM--QQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYG 480
           GASFITPM  QQQQL SVPLAQSANGQPVSQAN CQASFAPPPPPAPPSLSSTP VNQY 
Sbjct: 421 GASFITPMQQQQQQLTSVPLAQSANGQPVSQANPCQASFAPPPPPAPPSLSSTPPVNQYA 480

Query: 481 QSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQPQPQLTLPTSAGFYRPP 540
           QSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQ QPQLTLPTSAGFYRPP
Sbjct: 481 QSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQ-QPQLTLPTSAGFYRPP 540

Query: 541 GIGFYGQGQQSTPPPVPRQ 558
           GIGFYGQGQQSTPPPVPRQ
Sbjct: 541 GIGFYGQGQQSTPPPVPRQ 558

[Close]

BLAST of CmaCh14G004700 vs. NCBI nr
Match: XP_023522356.1 (regulation of nuclear pre-mRNA domain-containing protein 1A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 989.6 bits (2557), Expect = 1.1e-284
Identity = 534/560 (95.36%), Postives = 539/560 (96.25%), Query Frame = 0


Query: 1   MNNEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVS 60
           MNNE FEAQVL EKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQ+EQRVS
Sbjct: 1   MNNEGFEAQVLSEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQKEQRVS 60

Query: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFG 120
           FLYLANDILQNSRRKGSEFVNEFWKVLP +LK VYD GDESGKKA ARLV+IWEERKVFG
Sbjct: 61  FLYLANDILQNSRRKGSEFVNEFWKVLPVSLKNVYDHGDESGKKAVARLVDIWEERKVFG 120

Query: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180
           SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS
Sbjct: 121 SRGQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQS 180

Query: 181 VLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240
           VLDEHL EDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ
Sbjct: 181 VLDEHLNEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIRQ 240

Query: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSA 300
           LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTST VPGPSA
Sbjct: 241 LESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTPVPGPSA 300

Query: 301 TNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAAS 360
           T INVPTETTHVIDTKL SVQQNAIASPVQAM SFAGPKTSEDETKRAAAAAVAAKLAAS
Sbjct: 301 TTINVPTETTHVIDTKLPSVQQNAIASPVQAMASFAGPKTSEDETKRAAAAAVAAKLAAS 360

Query: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGI 420
           TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSI PSEKRQK+EKPMPISDVS SDGI
Sbjct: 361 TSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSIFPSEKRQKLEKPMPISDVSGSDGI 420

Query: 421 GASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYGQS 480
           GASFITPMQQQQL SVPLAQSANGQPVSQAN CQASFAPPPPPAPPSLSSTP VNQY QS
Sbjct: 421 GASFITPMQQQQLTSVPLAQSANGQPVSQANPCQASFAPPPPPAPPSLSSTPPVNQYAQS 480

Query: 481 GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPP---QQQPQPQLTLPTSAGFYRP 540
           GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPP   QQQ QPQL+LPTSAGFYRP
Sbjct: 481 GGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQQQQQQPQLSLPTSAGFYRP 540

Query: 541 PGIGFYGQGQQSTPPPVPRQ 558
           PGIGFYGQGQQSTPPPVPRQ
Sbjct: 541 PGIGFYGQGQQSTPPPVPRQ 560

[Close]

BLAST of CmaCh14G004700 vs. NCBI nr
Match: KAG7017605.1 (Regulation of nuclear pre-mRNA domain-containing protein 1B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 961.8 bits (2485), Expect = 2.5e-276
Identity = 539/650 (82.92%), Postives = 544/650 (83.69%), Query Frame = 0


Query: 1   MNNEVFEAQVLGEKLSKLNNSQQSIE---------------------------------- 60
           MNNEVFEAQVLGEKLSKLNNSQQSIE                                  
Sbjct: 1   MNNEVFEAQVLGEKLSKLNNSQQSIECIVVPLLAQGLSPLILGRLGGLKVSFKRKGVSSC 60

Query: 61  --------------------------------------------------------SLSR 120
                                                                   +LSR
Sbjct: 61  YQLEGLNSGPWKDLAWAPNLKKAGDNTHDFGPIYLLQEWVYAAGVWPFEYLEMSLGALSR 120

Query: 121 WCISHRKKAKQIVETWDKLFNSSQQEQRVSFLYLANDILQNSRRKGSEFVNEFWKVLPGA 180
           WCISHRK+AKQIVETWDKLFNSSQQEQRVSFLYLANDILQNSRRKGSEFVNEFWKVLPGA
Sbjct: 121 WCISHRKRAKQIVETWDKLFNSSQQEQRVSFLYLANDILQNSRRKGSEFVNEFWKVLPGA 180

Query: 181 LKYVYDQGDESGKKAAARLVNIWEERKVFGSRGQNLKDEMLGKYPPPTPLPSSNGKSSNP 240
           LKYVYDQGDE+GKKAAARLVNIWEERKVFGSRGQNLKDEMLGKYPPPTPLPSSNGKSSNP
Sbjct: 181 LKYVYDQGDENGKKAAARLVNIWEERKVFGSRGQNLKDEMLGKYPPPTPLPSSNGKSSNP 240

Query: 241 KKIVKRDAHSVRIKLAVGGVPERILTAFQSVLDEHLTEDAALNDCSSATHHLNQIEEDLN 300
           KKI+KRDAHSVRIKLAVGGVPERILTAFQSVLDEHL EDAALNDCSSATHHLNQIEEDLN
Sbjct: 241 KKIMKRDAHSVRIKLAVGGVPERILTAFQSVLDEHLNEDAALNDCSSATHHLNQIEEDLN 300

Query: 301 ASLAQGTQPRSALLDDLQEQENVIQRCIRQLESVEATRASLVSLLVEALLDQESKLELVR 360
           ASLAQGTQPRSALLDDLQE ENVIQRCIRQLESVEATRASLVSLLVEALLDQESKLELVR
Sbjct: 301 ASLAQGTQPRSALLDDLQEHENVIQRCIRQLESVEATRASLVSLLVEALLDQESKLELVR 360

Query: 361 NQLQIARSQIELASNVRKRSTSTTVPGPSATNINVPTETTHVIDTKLSSVQQNAIASPVQ 420
           NQLQIARSQIELASNVRKRSTST VPGPSAT INVPTETTHVIDTKL SVQQNAIASPVQ
Sbjct: 361 NQLQIARSQIELASNVRKRSTSTPVPGPSATTINVPTETTHVIDTKLPSVQQNAIASPVQ 420

Query: 421 AMVSFAGPKTSEDETKRAAAAAVAAKLAASTSSAQMLTSVLSSLVAEEAASMNGSLKSSG 480
           AM SFAGPKTSEDETKRAAAAAVAAKLAASTSSAQMLTSVLSSLVAEEAASMNGSLKSSG
Sbjct: 421 AMASFAGPKTSEDETKRAAAAAVAAKLAASTSSAQMLTSVLSSLVAEEAASMNGSLKSSG 480

Query: 481 FASLSILPSEKRQKIEKPMPISDVSSSDGIGASFITPM---QQQQLASVPLAQSANGQPV 540
           FASLSI PSEKRQK+EKPMPISDVS SDGIGASFITPM   QQQQL SVPLAQSANGQPV
Sbjct: 481 FASLSIFPSEKRQKLEKPMPISDVSGSDGIGASFITPMQQQQQQQLTSVPLAQSANGQPV 540

Query: 541 SQANLCQASFAPPPPPAPPSLSSTPSVNQYGQSGGLMGVSPYSFGAYSLPPPPPLPPHIA 558
           SQAN CQASFAPPPPPAPPSLSSTP VNQY QSGGLMGVSPYSFGAYSLPPPPPLPPHIA
Sbjct: 541 SQANPCQASFAPPPPPAPPSLSSTPPVNQYAQSGGLMGVSPYSFGAYSLPPPPPLPPHIA 600

[Close]

BLAST of CmaCh14G004700 vs. TAIR 10
Match: AT5G10060.1 (ENTH/VHS family protein )

HSP 1 Score: 274.6 bits (701), Expect = 1.7e-73
Identity = 207/554 (37.36%), Postives = 298/554 (53.79%), Query Frame = 0


Query: 3   NEVFEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVSFL 62
           + VF  Q+L +KL+KLN+SQQSIE+LS WCI +R KA+ IV TW+K F+S++ +Q+V  L
Sbjct: 2   SSVFSDQILIDKLAKLNSSQQSIETLSHWCIFNRSKAELIVTTWEKQFHSTEMDQKVPLL 61

Query: 63  YLANDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFGSR 122
           YLANDILQNS+R+G+EFV EFW VLP ALK +  QGD++GK A AR++ IWEER+VFGSR
Sbjct: 62  YLANDILQNSKRQGNEFVQEFWNVLPKALKDIVSQGDDNGKSAVARVIKIWEERRVFGSR 121

Query: 123 GQNLKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLA-VGGVPERILTAFQSV 182
            ++LKD MLG+   P PL  S  K     K  KR++ S R KLA  GGV E+I +A+  V
Sbjct: 122 SKSLKDVMLGE-DVPLPLDISK-KRPRGSKSSKRESKSSRTKLASSGGVAEKIASAYHLV 181

Query: 183 LDEHLTEDAALNDCSSATHHLNQIEEDLN--ASLAQGTQPRSALLDDLQEQENVIQRCIR 242
           + E+  E+A +N C SA   + ++E+D+    S A+    R +L  +L+E+E ++++CI 
Sbjct: 182 VAENSNEEAEMNKCKSAVKRIRKMEKDVEEACSTAKDNPKRKSLAKELEEEEYLLRQCIE 241

Query: 243 QLESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPS 302
           +L+SV+ +R+SLV+ L +AL +QES+L+ ++ Q+Q+A+ Q E A N++KR          
Sbjct: 242 KLKSVQGSRSSLVNQLKDALREQESELDNLKAQIQVAKEQTEEAQNMQKRLNDEDYTSKQ 301

Query: 303 ATNINVPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAA 362
            T     TET                              T   +  +   A++AA L A
Sbjct: 302 TTAATTITET---------------------------NDNTKSGQASKMTPASIAAMLTA 361

Query: 363 STSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDG 422
           STSS  ++ SVLSS  AE       + K+SG +           K E  +P+SD +    
Sbjct: 362 STSSHMIMQSVLSSFAAE-------ATKTSGLS-----------KSESTVPVSDTN---- 421

Query: 423 IGASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVNQYGQ 482
                         AS P   ++     +Q    Q  +   P P PP     P +N    
Sbjct: 422 --------------ASFPSYNNSQ----NQTPTTQGQYHVIPNPPPPQFLKPPVMN---- 469

Query: 483 SGGLMGVSPYSFGAYSLP----PPPPLPPHIAMGLSRPMSQPPQQQPQPQLTLPTSAGFY 542
                  +PY+FG   L     PPPP PPH+ +G  +P   P     Q     PT    +
Sbjct: 482 -------NPYAFGNIPLMPPGLPPPPPPPHL-IGNQQPQI-PQSNSAQQSQQGPT----F 469

Query: 543 RPPGIGFYGQGQQS 550
           +PPGI +YG    S
Sbjct: 542 QPPGIMYYGAPHHS 469

[Close]

BLAST of CmaCh14G004700 vs. TAIR 10
Match: AT3G26990.1 (ENTH/VHS family protein )

HSP 1 Score: 264.2 bits (674), Expect = 2.3e-70
Identity = 215/570 (37.72%), Postives = 299/570 (52.46%), Query Frame = 0


Query: 6   FEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVSFLYLA 65
           F AQ+L EKL+KLNNSQ SIE+LS WCI H  KAK +VETW + F+ + +EQR+++LYLA
Sbjct: 5   FNAQILVEKLAKLNNSQASIETLSHWCIFHMNKAKHVVETWGRQFHCAPREQRLAYLYLA 64

Query: 66  NDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFGSRGQN 125
           NDILQNSRRKGSEFV EFWKVLP AL+ + + GD+ G+K+A RLVNIWEERKVFGSRGQ 
Sbjct: 65  NDILQNSRRKGSEFVGEFWKVLPDALRDMIENGDDFGRKSARRLVNIWEERKVFGSRGQI 124

Query: 126 LKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAV------GGVPERILTAFQ 185
           LK+E+LG+ P        NG          R+ + V +KL+V      G   E++++A +
Sbjct: 125 LKEELLGRQP-------ENG---------TRNGNLVPLKLSVPQRQVNGSTLEKVVSAVE 184

Query: 186 SVLDEHLTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPRSALLDDLQEQENVIQRCIR 245
            +    + EDA +   ++A  +L +  +++   L+ G  P  A++ +LQ Q  +++ CI 
Sbjct: 185 VLHGVQIDEDALVGKSTNAAGYLEKATQEVERDLSSGHAPGPAVVKELQGQHVILRDCIE 244

Query: 246 QLESVEATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNV-RKRSTSTTVPGP 305
           QL ++E +R SL+S L EAL +QE KLE VRN LQIAR Q +   ++ R+         P
Sbjct: 245 QLGAMETSRTSLISHLREALQEQELKLEQVRNHLQIARFQSDRTGDLCRQLLDHGGSSQP 304

Query: 306 SATNINVPTETTHVIDTKLSSVQQNAIASPVQ--AMVSFA-GPKTSEDETKRAAAAAVAA 365
            AT      E   V  T  ++  Q+   S V+  A V FA  P  S ++ ++ AAAAV A
Sbjct: 305 PATEEEESKEVIKVSST--AAAPQSFTHSDVEQSAPVMFASNPTQSLEDPRKTAAAAVVA 364

Query: 366 KLAASTSSAQMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVS 425
           KL ASTSSA+ML+ VLSSL +E     N     +   S    P EKR K++         
Sbjct: 365 KLTASTSSAEMLSYVLSSLASEGIIGNNNPPAVTETLSSVDFPPEKRPKLQNH------- 424

Query: 426 SSDGIGASFITPMQQQQLASVPLAQSANGQPVSQANLCQASFAPPPPPAPPSLSSTPSVN 485
                  S+++P  Q    +                   +S  P P P PP     P   
Sbjct: 425 -----DQSYLSPHHQNTATT------------------SSSTPPQPLPPPPPFQLQPQFL 484

Query: 486 QYGQSGGLMGVSPYSFGAYSLPPPPPLPPHIAMGLSRPMSQPPQQQP-QPQLT------L 545
           Q  Q  G +  +P+++              IA   +    Q  +Q P  P LT       
Sbjct: 485 QPLQPPGPVNHTPFNY-------------TIATSTATTQQQQQEQGPWVPGLTQLSTTSA 513

Query: 546 PTSAGFYRPPG-IGFYGQGQQSTPPPVPRQ 558
           P+   + +  G  GFYG        PV RQ
Sbjct: 545 PSENSYQKFQGQDGFYGINSSVPITPVTRQ 513

[Close]

BLAST of CmaCh14G004700 vs. TAIR 10
Match: AT5G65180.1 (ENTH/VHS family protein )

HSP 1 Score: 255.0 bits (650), Expect = 1.4e-67
Identity = 185/499 (37.07%), Postives = 275/499 (55.11%), Query Frame = 0


Query: 6   FEAQVLGEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWDKLFNSSQQEQRVSFLYLA 65
           F  ++L + L+KLN++QQSI++LS+WCI HR +A+ +V TW+K F+S+Q  Q+V  LYLA
Sbjct: 5   FSEEILIDNLAKLNSTQQSIQTLSQWCIVHRSEAELVVTTWEKQFHSTQIGQKVPLLYLA 64

Query: 66  NDILQNSRRKGSEFVNEFWKVLPGALKYVYDQGDESGKKAAARLVNIWEERKVFGSRGQN 125
           NDILQNS+R+G+EFV EFWKVLPGALK +   GD+ GK   +RLVNIWEER+VFGSR ++
Sbjct: 65  NDILQNSKRQGNEFVQEFWKVLPGALKDIVSLGDDYGKGVVSRLVNIWEERRVFGSRSKS 124

Query: 126 LKDEMLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQSVLDEH 185
           LKD ML +  PP PL  S  K     K  KRD+ S + KL+ GGV E+I++AF  V  E+
Sbjct: 125 LKDVMLSEEAPP-PLDVSK-KRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSAFNLVRAEN 184

Query: 186 LTEDAALNDCSSATHHLNQIEEDLNASLAQGTQPR-SALLDDLQEQENVIQRCIRQLESV 245
             E+  +N C SA   + ++E+D+  + +    PR  +L  +L+E+EN++++ + +L+SV
Sbjct: 185 SNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEKLKSV 244

Query: 246 EATRASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSATNIN 305
           E +R SLV+ L EAL +QES+LE +++Q+Q+A+ Q E A N++KR  + T          
Sbjct: 245 EESRTSLVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNET---------- 304

Query: 306 VPTETTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAASTSSA 365
                   ++    +  Q+A  +P                   A+ AA+A  L +ST+S+
Sbjct: 305 -------PVNNNNGTSGQSAKITP-------------------ASIAAMAEMLTSSTNSS 364

Query: 366 QMLTSVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGIGASF 425
            ++ SVLSS  A EA   +G  KS+                      SD +       +F
Sbjct: 365 MIMHSVLSSFAA-EATQTSGLTKSN---------------------TSDTN-------AF 424

Query: 426 ITPMQQQQLASVPLAQSANGQPVSQAN--LCQASFAPPPPPA--PPSLSSTPSVNQYGQS 485
           + P   QQ   +P   ++   P    N  L      PPPPP   PP + +  +     Q 
Sbjct: 425 VVPPNPQQYHIIPNPAASQQFPYGFGNIPLMPPGALPPPPPGTLPPHMMNNNNQPNAAQQ 436

Query: 486 GGLMGVSPYSFGAYSLPPP 500
               G S +  G     PP
Sbjct: 485 QAQQGQSFHPPGMMYFGPP 436

[Close]

BLAST of CmaCh14G004700 vs. TAIR 10
Match: AT5G65180.2 (ENTH/VHS family protein )

HSP 1 Score: 99.0 bits (245), Expect = 1.3e-20
Identity = 110/375 (29.33%), Postives = 175/375 (46.67%), Query Frame = 0


Query: 130 MLGKYPPPTPLPSSNGKSSNPKKIVKRDAHSVRIKLAVGGVPERILTAFQSVLDEHLTED 189
           ML +  PP PL  S  K     K  KRD+ S + KL+ GGV E+I++AF  V  E+  E+
Sbjct: 1   MLSEEAPP-PLDVSK-KRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSAFNLVRAENSNEE 60

Query: 190 AALNDCSSATHHLNQIEEDLNASLAQGTQPR-SALLDDLQEQENVIQRCIRQLESVEATR 249
             +N C SA   + ++E+D+  + +    PR  +L  +L+E+EN++++ + +L+SVE +R
Sbjct: 61  TEMNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLAKELEEEENILRQSVEKLKSVEESR 120

Query: 250 ASLVSLLVEALLDQESKLELVRNQLQIARSQIELASNVRKRSTSTTVPGPSATNINVPTE 309
            SLV+ L EAL +QES+LE +++Q+Q+A+ Q E A N++KR  + T              
Sbjct: 121 TSLVNHLREALREQESELENLQSQIQVAQEQTEEAQNMQKRLNNET-------------- 180

Query: 310 TTHVIDTKLSSVQQNAIASPVQAMVSFAGPKTSEDETKRAAAAAVAAKLAASTSSAQMLT 369
               ++    +  Q+A  +P                   A+ AA+A  L +ST+S+ ++ 
Sbjct: 181 ---PVNNNNGTSGQSAKITP-------------------ASIAAMAEMLTSSTNSSMIMH 240

Query: 370 SVLSSLVAEEAASMNGSLKSSGFASLSILPSEKRQKIEKPMPISDVSSSDGIGASFITPM 429
           SVLSS  A EA   +G  KS+                      SD +       +F+ P 
Sbjct: 241 SVLSSFAA-EATQTSGLTKSN---------------------TSDTN-------AFVVPP 300

Query: 430 QQQQLASVPLAQSANGQPVSQAN--LCQASFAPPPPPA--PPSLSSTPSVNQYGQSGGLM 489
             QQ   +P   ++   P    N  L      PPPPP   PP + +  +     Q     
Sbjct: 301 NPQQYHIIPNPAASQQFPYGFGNIPLMPPGALPPPPPGTLPPHMMNNNNQPNAAQQQAQQ 308

Query: 490 GVSPYSFGAYSLPPP 500
           G S +  G     PP
Sbjct: 361 GQSFHPPGMMYFGPP 308

The following BLAST results are available for this feature:

BLAST of CmaCh14G004700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9NQG5	4.9e-25	32.79	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Homo sapiens OX=9...	[more]
Q9CSU0	4.9e-25	32.79	Regulation of nuclear pre-mRNA domain-containing protein 1B OS=Mus musculus OX=1...	[more]
Q0P5J9	2.7e-23	29.34	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Bos taurus OX=991...	[more]
Q96P16	2.7e-23	29.34	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Homo sapiens OX=9...	[more]
Q5R8Y3	2.7e-23	29.34	Regulation of nuclear pre-mRNA domain-containing protein 1A OS=Pongo abelii OX=9...	[more]

BLAST of CmaCh14G004700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J690	9.2e-301	100.00	regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1 OS=C...	[more]
A0A6J1F335	9.5e-290	96.96	UPF0400 protein C337.03-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A1S3B7H0	1.5e-258	87.88	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucumis melo...	[more]
A0A6J1DF20	1.6e-249	86.45	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Momordica ch...	[more]
A0A6J1I2G4	6.9e-248	85.79	regulation of nuclear pre-mRNA domain-containing protein 1B-like OS=Cucurbita ma...	[more]

BLAST of CmaCh14G004700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982898.1	1.9e-300	100.00	regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1 [Cuc...	[more]
XP_023526660.1	5.2e-290	96.61	UPF0400 protein C337.03-like [Cucurbita pepo subsp. pepo]	[more]
XP_022934552.1	2.0e-289	96.96	UPF0400 protein C337.03-like isoform X1 [Cucurbita moschata]	[more]
XP_023522356.1	1.1e-284	95.36	regulation of nuclear pre-mRNA domain-containing protein 1A-like [Cucurbita pepo...	[more]
KAG7017605.1	2.5e-276	82.92	Regulation of nuclear pre-mRNA domain-containing protein 1B [Cucurbita argyrospe...	[more]

BLAST of CmaCh14G004700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10060.1	1.7e-73	37.36	ENTH/VHS family protein	[more]
AT3G26990.1	2.3e-70	37.72	ENTH/VHS family protein	[more]
AT5G65180.1	1.4e-67	37.07	ENTH/VHS family protein	[more]
AT5G65180.2	1.3e-20	29.33	ENTH/VHS family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 227..247
None	No IPR available	COILS	Coil	Coil	coord: 259..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 498..557
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 453..479
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 403..422
None	No IPR available	PANTHER	PTHR12460:SF21	RNA POLYMERASE II-BINDING DOMAIN PROTEIN	coord: 1..557
None	No IPR available	PANTHER	PTHR12460	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	coord: 1..557
None	No IPR available	CDD	cd16981	CID_RPRD_like	coord: 9..131 e-value: 2.29604E-61 score: 196.263
IPR006569	CID domain	SMART	SM00582	558neu5	coord: 10..131 e-value: 7.7E-40 score: 148.4
IPR006569	CID domain	PFAM	PF04818	CID	coord: 10..121 e-value: 2.8E-35 score: 121.2
IPR006569	CID domain	PROSITE	PS51391	CID	coord: 3..135 score: 46.142975
IPR008942	ENTH/VHS	GENE3D	1.25.40.90		coord: 5..133 e-value: 1.8E-40 score: 140.2
IPR008942	ENTH/VHS	SUPERFAMILY	48464	ENTH/VHS domain	coord: 9..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G004700.1	CmaCh14G004700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing