CmaCh13G006030 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGGGGAAAAAGAAAAAAAAAAGAAAAAAAAAAGGCGTCGACGGCCGGCCACGCGCTTGCCGCGTGAGATTCCACGTGCATCGTAGTCAATCAATGCCCGGCCAAAGGCACTCCCACGTGAACCCTCTCCGTTTCGGAAATTCCCTCTCCCGTTCCCGCTGGCCAGGCCGCAGTCTTCCCGCTTGTCAGCGACCCCACCTTTCCTCCTCACCGTCCGCTTTCTTTTGGGCCGAAGCCGAAGCCGAAGCCGAATCCGAGCCCTTCCGACACACTAACCAAACCATGACCCAACCCCCCTCCCGGTCCCGGCCCGCTTCCTTTTCGGTTCCCTATCCCTATCCGCTTCCCATTTCATCCCCGGCGATATCATCGCCGACGCTCCCTCTTTTATACCTCTTTTACCCATTCCCTTCGTCATCTTCTTCCCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTCTCCCTTATCTCTTTTCTGAGTTCTGATGGGGGATCTCACCGATTCTCTCACCCCTTCCTCTGCTAACTCCCGCCAGGTTCCCATTCGCGAAGACTGTTGGAGCGAGGATGCTACCTCTACTCTCATCGACGCTTGGGGTCGTCGTTTTCTCGACCTCAATCGTGGAAATCTCCGCCAGAAGGACTGGCAGGACGTTGCCGATTCTGTCAACTCCCTTCATGGCCTTACCAAGAAGACCCATCGCACCGATATTCAGTGTAAGAACCGGATCGACACCGTTAAGAAGAAGTACAAGACCGAGAGGGCTCGGGTTGCTGCCTCCCATGGCAGTTTTGTCTCCTCTTGGCCCTTTTATGCTCGTCTTGATGAACTTATTGGCCCTACTGTCTCCATGAAGAAACCCTCCTCTCCTCCTATGGCTCTTCCTTTGCCCTTTCGGAAGACGCCACCCCCTGCCGTTGCTGCTACTCCTGCCGTCGTCGCCGTGTCTCAGAAGCGGACTGCCGCAGCGGTGGACGACGGGTATTTTCGGAGGAATTACTCGGCTATAGCGGCTGCTGCTGCGGCGGCTGCATTGACGGAGGAAGAGGAGGACGACGAAGAGGAGGAGGAGGAGCGAGTGAGCGACGACGAGGAGGCGGAAGGGGAGGGCATGAGTAGGTTGGCAAGAGCAATTAAAAGGTTCGGGGAGGTGTATGAAAGAGTGGAAGCCGAGAAGGTGCGGCTGATGGTGGAATTGGAGAAGCAGAGGATGCAATTTGCCAAGGATTTGGAGGTACAGCGGATGCATATGTTTATGGAGACCCAGGTTCAGCTTGAGAGGATTAAGCGAGGGAAGAAATCAAATCCCAGTGGTAAGGCTAAGGGAACTTTCTGCTCTGTTTTCCCATTGAAATTGTTTTTTTCTTTTAGCACGAAGCTGAAGTTTGCTCTGTTACAGATTCAACATTTATTTCAGCGTATTCTGTGCTGACTTCGTGGTAGATTTAGTTCATCTGATTGTTTTCTAGAATATTTTGGTTTTTGATATCTCTGGAATAGAATGGTTTCCCAAGAAATTCTACAACTTTAAAATAAACTACTAATTTAACCTGGCATGGTCACATTTCAATCTTCTTTTAGAAATGTTAGTAAACTTTTTTATTTTCTTTTCCTTCTATGGACCCACGAGATGATTCTTTAATTTTACTGGTGCTGGTGCCATGTAATTACAATATAGAGCTTATATCTGGATATGGGTTGTGATGAAGTGGTATGTCCTTGCTTATATTGCATTGCTACATGACCAACTCTTAATGATTAAGAGAAGTATGTGAGGGCTTTAGAGATTTTAAACATTTAGAAGTGTGCTTGAACAATTCAATACTGCATAAAGATCACTTGGGCACAAATTTTTTTCTAGCTTTGTCTGAGTGGACGCCTAATTGTTCACTATGGTCACATTTACATGCAATTAGTGATCACTCTGAACTTTTCTTGGAGAGAATAGGTCCTGACTTGCAAGGCTTTTCTGCATACTACAAAGAAAAAAGTAATGCAGTTATTCAGGTTTGAGGTGATCATGTTTTGGTATATTTATCATCTTTGAATGTTGAAAATTTGAATTGCAGAAAGAATCAGAGCATAAGAAAGGGAGAAGAAGTGAGGTAAGACAAGTATAACTGTGGTATAGTTTAATAGCATGAAGAAACAACCACCAGAAGAAGAGCTGTACGTGACTGGAAATAGAAATAATGAAATCCCATTGCGTTTGAACCCCCTATTGTTCCTGATAAGAAAAAAGAGTGCCGACACTTACTAACGGTTTAATATACACATCATGTCTTTTTTCTGTGTTTCAAATAGATAATGTGTGGCTTGGAACAATGTTCTCATTCGTTTTTGCGAATTTAAGAACATTGGAATATAGGACTGATACTAAGCATCAGAAACTTGGCGAAGTGGAGCCAAGTTCTGCTTTATTTTATATGAGCAAAGTGGTATTAGATTACTGGATTATCTCCTATGGCTATTTTGTTTGTCTTTGACTCATTTTTTAAACTTGGGTTTAGGTACTTAAAAGGATGATTCCTTCCTCAAAATTATACTATTGGATCATATAGTCCAATGTCAGTTTCCTCTGAAGATTATGAAACCAGCTCTCTTCTTCATTTCTGATGTAACATGTCATGCGTCCACTCTTAATCTGTTCTTTGGTCTTCTTGGGTTTTACTTATGGGATTCAGGTTCATAAAATGATATAAGATTGTTATCTGCGAGAATTGCAAGTGTATAGGAACCCTGTTTCTTGAAAACCTCTTCTACTGTCAAGTTTGTGGTAGCTACCCTTACATTATTGGGGACAGTCATTTGATAATGTCAAGACATGAATATTCATAATCAACTGTCAAAGGGACAAGGTGACCAGAATTATGGGATAAAACATGCATGACATTTACTTGTACGTTTCAAGTTACAATATTGCCTTGATTGTTTACTTGTTGCATTCGTTCGAGTTTGAAATAACTGATTCCTGTGCTTTGCTACACACCGTTTGAAATCAAATGTTCATTTTACTTCGTGTGGTTTATGAAACTAAAAAACATTTCTTTTTCTGATGCAGACATCTAGAGGAGGTAGCCGTGTGAGAGGGAATGACAGAGAAACTTCTTAAGGTACATACACACGGAAGCTGGTATTCTCAGGAGATGATAAAAACTTCTAATTTTAACTTCACAATATGGAAAGTTATTTTGTGAAGCTAGCTAAGACCAACCCCCTTCCCCTCTCCTTGTGGGGAAGTTAGGCGAACCGATGTAATCGACTTTTAGATGTGAAGCTAATTTGTGACAACCTTTTATCTTCTACTTTGAGAATTAGCGTGGTGGATACATTGAGCTTCTTAAAATATCCTATGCCTCGTTTTTAAAGATGTTGTTAGGAAAGCTAATCTGGTATGAATGTTGTATACAGCTTTCCCTCATCTTCTCATGTGGTGTAATGGTAAGTGCTCTTGTTTCAATGAACAAACTGAGAAATGTGATAATCTATCTATTATGACAAGGTGGGTGTTTCTTTTATACGTATTTCCACGCCTTGTGTTACCTGGAAATACAAAAAAT AATGGGGAAAAAGAAAAAAAAAAGAAAAAAAAAAGGCGTCGACGGCCGGCCACGCGCTTGCCGCGTGAGATTCCACGTGCATCGTAGTCAATCAATGCCCGGCCAAAGGCACTCCCACGTGAACCCTCTCCGTTTCGGAAATTCCCTCTCCCGTTCCCGCTGGCCAGGCCGCAGTCTTCCCGCTTGTCAGCGACCCCACCTTTCCTCCTCACCGTCCGCTTTCTTTTGGGCCGAAGCCGAAGCCGAAGCCGAATCCGAGCCCTTCCGACACACTAACCAAACCATGACCCAACCCCCCTCCCGGTCCCGGCCCGCTTCCTTTTCGGTTCCCTATCCCTATCCGCTTCCCATTTCATCCCCGGCGATATCATCGCCGACGCTCCCTCTTTTATACCTCTTTTACCCATTCCCTTCGTCATCTTCTTCCCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTCTCCCTTATCTCTTTTCTGAGTTCTGATGGGGGATCTCACCGATTCTCTCACCCCTTCCTCTGCTAACTCCCGCCAGGTTCCCATTCGCGAAGACTGTTGGAGCGAGGATGCTACCTCTACTCTCATCGACGCTTGGGGTCGTCGTTTTCTCGACCTCAATCGTGGAAATCTCCGCCAGAAGGACTGGCAGGACGTTGCCGATTCTGTCAACTCCCTTCATGGCCTTACCAAGAAGACCCATCGCACCGATATTCAGTGTAAGAACCGGATCGACACCGTTAAGAAGAAGTACAAGACCGAGAGGGCTCGGGTTGCTGCCTCCCATGGCAGTTTTGTCTCCTCTTGGCCCTTTTATGCTCGTCTTGATGAACTTATTGGCCCTACTGTCTCCATGAAGAAACCCTCCTCTCCTCCTATGGCTCTTCCTTTGCCCTTTCGGAAGACGCCACCCCCTGCCGTTGCTGCTACTCCTGCCGTCGTCGCCGTGTCTCAGAAGCGGACTGCCGCAGCGGTGGACGACGGGTATTTTCGGAGGAATTACTCGGCTATAGCGGCTGCTGCTGCGGCGGCTGCATTGACGGAGGAAGAGGAGGACGACGAAGAGGAGGAGGAGGAGCGAGTGAGCGACGACGAGGAGGCGGAAGGGGAGGGCATGAGTAGGTTGGCAAGAGCAATTAAAAGGTTCGGGGAGGTGTATGAAAGAGTGGAAGCCGAGAAGGTGCGGCTGATGGTGGAATTGGAGAAGCAGAGGATGCAATTTGCCAAGGATTTGGAGGTACAGCGGATGCATATGTTTATGGAGACCCAGGTTCAGCTTGAGAGGATTAAGCGAGGGAAGAAATCAAATCCCAGTGACATCTAGAGGAGGTAGCCGTGTGAGAGGGAATGACAGAGAAACTTCTTAAGGTACATACACACGGAAGCTGGTATTCTCAGGAGATGATAAAAACTTCTAATTTTAACTTCACAATATGGAAAGTTATTTTGTGAAGCTAGCTAAGACCAACCCCCTTCCCCTCTCCTTGTGGGGAAGTTAGGCGAACCGATGTAATCGACTTTTAGATGTGAAGCTAATTTGTGACAACCTTTTATCTTCTACTTTGAGAATTAGCGTGGTGGATACATTGAGCTTCTTAAAATATCCTATGCCTCGTTTTTAAAGATGTTGTTAGGAAAGCTAATCTGGTATGAATGTTGTATACAGCTTTCCCTCATCTTCTCATGTGGTGTAATGGTAAGTGCTCTTGTTTCAATGAACAAACTGAGAAATGTGATAATCTATCTATTATGACAAGGTGGGTGTTTCTTTTATACGTATTTCCACGCCTTGTGTTACCTGGAAATACAAAAAAT ATGGGGGATCTCACCGATTCTCTCACCCCTTCCTCTGCTAACTCCCGCCAGGTTCCCATTCGCGAAGACTGTTGGAGCGAGGATGCTACCTCTACTCTCATCGACGCTTGGGGTCGTCGTTTTCTCGACCTCAATCGTGGAAATCTCCGCCAGAAGGACTGGCAGGACGTTGCCGATTCTGTCAACTCCCTTCATGGCCTTACCAAGAAGACCCATCGCACCGATATTCAGTGTAAGAACCGGATCGACACCGTTAAGAAGAAGTACAAGACCGAGAGGGCTCGGGTTGCTGCCTCCCATGGCAGTTTTGTCTCCTCTTGGCCCTTTTATGCTCGTCTTGATGAACTTATTGGCCCTACTGTCTCCATGAAGAAACCCTCCTCTCCTCCTATGGCTCTTCCTTTGCCCTTTCGGAAGACGCCACCCCCTGCCGTTGCTGCTACTCCTGCCGTCGTCGCCGTGTCTCAGAAGCGGACTGCCGCAGCGGTGGACGACGGGTATTTTCGGAGGAATTACTCGGCTATAGCGGCTGCTGCTGCGGCGGCTGCATTGACGGAGGAAGAGGAGGACGACGAAGAGGAGGAGGAGGAGCGAGTGAGCGACGACGAGGAGGCGGAAGGGGAGGGCATGAGTAGGTTGGCAAGAGCAATTAAAAGGTTCGGGGAGGTGTATGAAAGAGTGGAAGCCGAGAAGGTGCGGCTGATGGTGGAATTGGAGAAGCAGAGGATGCAATTTGCCAAGGATTTGGAGGTACAGCGGATGCATATGTTTATGGAGACCCAGGTTCAGCTTGAGAGGATTAAGCGAGGGAAGAAATCAAATCCCAGTGACATCTAG MGDLTDSLTPSSANSRQVPIREDCWSEDATSTLIDAWGRRFLDLNRGNLRQKDWQDVADSVNSLHGLTKKTHRTDIQCKNRIDTVKKKYKTERARVAASHGSFVSSWPFYARLDELIGPTVSMKKPSSPPMALPLPFRKTPPPAVAATPAVVAVSQKRTAAAVDDGYFRRNYSAIAAAAAAAALTEEEEDDEEEEEERVSDDEEAEGEGMSRLARAIKRFGEVYERVEAEKVRLMVELEKQRMQFAKDLEVQRMHMFMETQVQLERIKRGKKSNPSDI Homology
BLAST of CmaCh13G006030 vs. ExPASy Swiss-Prot
Match: Q9LJG8 (Trihelix transcription factor ASIL2 OS=Arabidopsis thaliana OX=3702 GN=ASIL2 PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32 Identity = 114/333 (34.23%), Postives = 165/333 (49.55%), Query Frame = 0
BLAST of CmaCh13G006030 vs. ExPASy Swiss-Prot
Match: Q9SYG2 (Trihelix transcription factor ASIL1 OS=Arabidopsis thaliana OX=3702 GN=ASIL1 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 7.4e-30 Identity = 104/272 (38.24%), Postives = 146/272 (53.68%), Query Frame = 0
BLAST of CmaCh13G006030 vs. ExPASy TrEMBL
Match: A0A6J1KJD8 (trihelix transcription factor ASIL1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495157 PE=4 SV=1) HSP 1 Score: 524.2 bits (1349), Expect = 3.2e-145 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmaCh13G006030 vs. ExPASy TrEMBL
Match: A0A6J1EG41 (trihelix transcription factor ASIL1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111434006 PE=4 SV=1) HSP 1 Score: 522.7 bits (1345), Expect = 9.4e-145 Identity = 276/278 (99.28%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmaCh13G006030 vs. ExPASy TrEMBL
Match: A0A6J1KL19 (trihelix transcription factor ASIL1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495157 PE=4 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 3.6e-144 Identity = 276/277 (99.64%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of CmaCh13G006030 vs. ExPASy TrEMBL
Match: A0A6J1EGN6 (trihelix transcription factor ASIL1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434006 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 1.0e-143 Identity = 274/277 (98.92%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of CmaCh13G006030 vs. ExPASy TrEMBL
Match: A0A5A7UU58 (Trihelix transcription factor ASIL2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002280 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 7.0e-132 Identity = 253/276 (91.67%), Postives = 266/276 (96.38%), Query Frame = 0
BLAST of CmaCh13G006030 vs. NCBI nr
Match: XP_023000825.1 (trihelix transcription factor ASIL1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 524.2 bits (1349), Expect = 6.7e-145 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmaCh13G006030 vs. NCBI nr
Match: XP_022927072.1 (trihelix transcription factor ASIL1-like isoform X2 [Cucurbita moschata] >KAG6583959.1 Trihelix transcription factor ASIL2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 522.7 bits (1345), Expect = 1.9e-144 Identity = 276/278 (99.28%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmaCh13G006030 vs. NCBI nr
Match: XP_023000824.1 (trihelix transcription factor ASIL1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 520.8 bits (1340), Expect = 7.4e-144 Identity = 276/277 (99.64%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of CmaCh13G006030 vs. NCBI nr
Match: XP_023519391.1 (trihelix transcription factor ASIL1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 520.4 bits (1339), Expect = 9.6e-144 Identity = 274/278 (98.56%), Postives = 278/278 (100.00%), Query Frame = 0
BLAST of CmaCh13G006030 vs. NCBI nr
Match: XP_022927071.1 (trihelix transcription factor ASIL1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 519.2 bits (1336), Expect = 2.1e-143 Identity = 274/277 (98.92%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of CmaCh13G006030 vs. TAIR 10
Match: AT3G58630.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 193.0 bits (489), Expect = 3.3e-49 Identity = 134/295 (45.42%), Postives = 180/295 (61.02%), Query Frame = 0
BLAST of CmaCh13G006030 vs. TAIR 10
Match: AT3G11100.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 179.9 bits (455), Expect = 2.9e-45 Identity = 114/264 (43.18%), Postives = 163/264 (61.74%), Query Frame = 0
BLAST of CmaCh13G006030 vs. TAIR 10
Match: AT5G05550.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 179.9 bits (455), Expect = 2.9e-45 Identity = 110/282 (39.01%), Postives = 165/282 (58.51%), Query Frame = 0
BLAST of CmaCh13G006030 vs. TAIR 10
Match: AT5G05550.2 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 179.9 bits (455), Expect = 2.9e-45 Identity = 110/282 (39.01%), Postives = 165/282 (58.51%), Query Frame = 0
BLAST of CmaCh13G006030 vs. TAIR 10
Match: AT3G14180.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 140.6 bits (353), Expect = 1.9e-33 Identity = 114/333 (34.23%), Postives = 165/333 (49.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|