CmaCh13G005170 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGCCACATCTCGATTGGCCAGATTCATAAGCGAAGCTTGCCCTCCCCAATTCGTCTCTGTAATGAGGCGCAGAAGCCCCAAAGTTCTAGACACCATTAATGAAGAAGATCACAGAGAAGCTCTCTCCTCCTCTTCCTCCTTGAAGATCGACAAATTCTCTGTTTCTTCGCTGCCGTCCACCATGGCTGCTTCTCCGCCTTCTCCTGCAACTTCCGCCGCCGTTAATTCCAAATACTTTCTCAATCAGGTCCCCTTGAGGTCCTTCTCCCTTTTCGAGCACTGA ATGGCAGCCACATCTCGATTGGCCAGATTCATAAGCGAAGCTTGCCCTCCCCAATTCGTCTCTGTAATGAGGCGCAGAAGCCCCAAAGTTCTAGACACCATTAATGAAGAAGATCACAGAGAAGCTCTCTCCTCCTCTTCCTCCTTGAAGATCGACAAATTCTCTGTTTCTTCGCTGCCGTCCACCATGGCTGCTTCTCCGCCTTCTCCTGCAACTTCCGCCGCCGTTAATTCCAAATACTTTCTCAATCAGGTCCCCTTGAGGTCCTTCTCCCTTTTCGAGCACTGA ATGGCAGCCACATCTCGATTGGCCAGATTCATAAGCGAAGCTTGCCCTCCCCAATTCGTCTCTGTAATGAGGCGCAGAAGCCCCAAAGTTCTAGACACCATTAATGAAGAAGATCACAGAGAAGCTCTCTCCTCCTCTTCCTCCTTGAAGATCGACAAATTCTCTGTTTCTTCGCTGCCGTCCACCATGGCTGCTTCTCCGCCTTCTCCTGCAACTTCCGCCGCCGTTAATTCCAAATACTTTCTCAATCAGGTCCCCTTGAGGTCCTTCTCCCTTTTCGAGCACTGA MAATSRLARFISEACPPQFVSVMRRRSPKVLDTINEEDHREALSSSSSLKIDKFSVSSLPSTMAASPPSPATSAAVNSKYFLNQVPLRSFSLFEH Homology
BLAST of CmaCh13G005170 vs. ExPASy TrEMBL
Match: A0A5A7UJX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00970 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 5.5e-28 Identity = 77/97 (79.38%), Postives = 82/97 (84.54%), Query Frame = 0
BLAST of CmaCh13G005170 vs. ExPASy TrEMBL
Match: A0A0A0LYE6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534780 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.9e-26 Identity = 74/98 (75.51%), Postives = 81/98 (82.65%), Query Frame = 0
BLAST of CmaCh13G005170 vs. ExPASy TrEMBL
Match: A0A314XQS6 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_10926 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.1e-11 Identity = 55/101 (54.46%), Postives = 64/101 (63.37%), Query Frame = 0
BLAST of CmaCh13G005170 vs. ExPASy TrEMBL
Match: A0A803R962 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10 Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of CmaCh13G005170 vs. ExPASy TrEMBL
Match: A0A6J5WYZ3 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS25601 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10 Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 0
BLAST of CmaCh13G005170 vs. NCBI nr
Match: KAG7019500.1 (hypothetical protein SDJN02_18461, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 155.6 bits (392), Expect = 2.1e-34 Identity = 86/93 (92.47%), Postives = 87/93 (93.55%), Query Frame = 0
BLAST of CmaCh13G005170 vs. NCBI nr
Match: KAG6583880.1 (hypothetical protein SDJN03_19812, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 138.3 bits (347), Expect = 3.5e-29 Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
BLAST of CmaCh13G005170 vs. NCBI nr
Match: KAA0054015.1 (hypothetical protein E6C27_scaffold318G00710 [Cucumis melo var. makuwa] >TYK20701.1 hypothetical protein E5676_scaffold480G00970 [Cucumis melo var. makuwa]) HSP 1 Score: 133.3 bits (334), Expect = 1.1e-27 Identity = 77/97 (79.38%), Postives = 82/97 (84.54%), Query Frame = 0
BLAST of CmaCh13G005170 vs. NCBI nr
Match: KGN65872.1 (hypothetical protein Csa_023250 [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 8.1e-26 Identity = 74/98 (75.51%), Postives = 81/98 (82.65%), Query Frame = 0
BLAST of CmaCh13G005170 vs. NCBI nr
Match: PQP93653.1 (hypothetical protein Pyn_10926 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 78.2 bits (191), Expect = 4.3e-11 Identity = 55/101 (54.46%), Postives = 64/101 (63.37%), Query Frame = 0
BLAST of CmaCh13G005170 vs. TAIR 10
Match: AT1G30260.1 (BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT4G21060.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 1.5e-09 Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of CmaCh13G005170 vs. TAIR 10
Match: AT4G21060.1 (Galactosyltransferase family protein ) HSP 1 Score: 50.8 bits (120), Expect = 6.9e-07 Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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