CmaCh13G004410 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAAGAGAGAAAATGCAAAGGAAATAAATTTAATTTTCAATCGCTGTCGTGCGTAATCGAGTTGTTCTTGTTATTGTTCATCTTGAGGAGGGAGAAAAGAGGGCGTGTTTTGCTTCCAAGAGAGAGACAGGCATCTGTCTTGATTGTTTTGATTCATTCTTAACCATTTTTGTTCTGTCAACGCCTGTTCTTCCACGATTCTCTTCGATTTTTGTCTCGATTGCGGTTTACGGCCATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGAGGCTTTTCTCCCCTTTTTGATTTTTAAAGTTTGATTTCTTTTTTCTGTCCGGATTTTGATGCCAAATCGCGATGTGGGTCTCTTTGATTTTCCTTTTCCGGAATTGGGTTTTCATTATTGTTCTTCTTTTCATCGTCAATTCGATTTGGCTTAATCCTTGGTAGTCTTGATTTGTGGCTGAATTCTGATCTAGGGTTTTGTTTTGTTCGCGAATAACTGAATTTTTTTCTGGTTTGATTGTATTTCTGTTGGTTGTAATTACGAAATCTCTGTTTGCATTCTCTATATATCATTAACTTCTGATGATTGTTGGGATAATCCCTTTCCAATTTATAATTCGGTCGTGATCTAAGTTACTTCTCTGCATTTTAATTAGCAGAACGTTCAGTAGGATCGTGACTATTGCCCTTAGTTTCAGCAATCAATTTTATTAGACGGTATCCCTTTTTGAGATTTTTTTACATGTTCTTCCCCTCTTTGTCCAATTCTGAAATTAAATCATAAATTTTATTGACCTCATATTATGCTTGCCCCTGATTTTACTATCCAATTGTCTCACTTCAATGGCTATCATACATGGAATGTTATTTGTTGAAAAAAGAAGGGGCTGGATGGACTATGTCTAGCTACAACTATTTTGGAACAACACATGAAATCCAGTTTATTTTACTTTCATTTTTCGCTCAGGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGTTTGTATTATAAACCATTTGGATTTGGCTGTTGAAATTTTTGAAATGTCTTTCTGTCTTGGTCGTCTGTAATCTTTTTAATTGTTCAATTATGTAGGAATCGACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGTAAGTGGCGTTTGAAAACTCTTGATTGGTTGCATATGGTCTGAGAACAAAATAATTGTAATTGTGCTTGGGCATTACATCTTCAAATTCATTGTACAAGCCATCAGCCATTTCCGTGAAATATGTTTGGGATGAAAAAGTGTTATGATGTGTCTATGAATTAAGAACCAACCATTTGTTTTTATAATTAATTGCTAAAAGAACTTAGAAGTTGTAACGGCCCAAGTCCACCACTAGTCTATATTGTCCTCTTTGGGCTTTTCCTTTTGAGTTTCTTCTCAAGGTTTTTAAAACGCGTATGCTAGTGAGAGGTTTCCACATCTTTATAAAGAATGTTTTGTCCTCCTCCCCAACCAATGTGGGATTTCACAATCCACCCCCTTCTGGGCCCAGCGTTCTTGCTGGCACTTGTTCCCTTCTCTAATCAATGTGGGACCCCCAATCCACCCTCTCTAGTCCACCTCCCTTTGGGGCTCAGCCTCTTCACTGGCACATCGTCTAGTGTCTGGCTCTGATACCATTTGTAACTGCACAAGCCCACCGCTAGCGGATAGTGTCCTCTTTGGGCTTCTCCTTAAGGTTTTTAAAACGCGTTTGCTAAAGAGAGGTTTCTACGTCCTTATAAAGAATGTTTTGTTCTCCTCCCCAACCGACGTGAAATCTCACCTAAGTTCTTTTTCATTTTTAATCATTTAAAAAAAATGATGGGAGTTAACAAAATCTTTGAAATTTACCAACAGGTATTTGACTTACGAAAAGGAAACTTCAACAGAATTGATGTTTTGAACTTTTAACCAAGTGGGGGCTTTTGTGAAGTTATTAAGAGGCTTAGAGATAAATAAATCATGTCATGATGGTGCTTGATAAAGGAAACAGTGATGGGTTTGTATATGACCTGAAATGGGATCCTGTGTGTGTGTATTAGAGCGGGGAGCTAGGAGTAAAGCCTTTTTAGGAGTTCTTACCCTTCTGAAAAGCGACATACTCTATACATATCAGGCTTCACTAGGGATTATTTATCCTTTTATATACTACTGTAATTGAATTACAATTTTTATCCTTTTCATACCTCAACTCTTGTGTGTAACCTCTATTTGATCGTAGGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGTAGTCTTACTGTTGGGTGCCCTAAATTTACATTGGAAGAGCATCTGGATTGAACATTCTGTAAACTTTTAGCAAGTGAAATTAGTGTGGCAGTTGTCTACCTTATTTTTTTTACCAATTGGATCATCTCCTTTTATCAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATATGTTGGATTCTAGGAGTGTTGCTGCAGAGGCAAGTACTCCCAACCCCAGTTTTCTTTATTCTGTAGTACTTTGTTGAACTGGGATGCATTTCATACAAATAAAAAAGTATATTTCTGCTAGTGACGATCTTCTCTAGTTGGAATTTTGTGATTTTTTTGTACTAAGCTGTGACAATTGGTTCAATTGTTGCTCGTGTAATTGTGCATCATACAGGACGCTCAAACGTATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGGTTAGTAACTAGGACATATGAGTTCAAGGGACTGCCCCCGCCCCCCACCCCCCTACCGAAATAAAAGAGCTGAAACAAGATTTCTCTTTTATGCTTACGATATCTCTGGGTCGTAGACTTAAACAAGATTTGAGTTCTAAATTTGTATTTGACGGGATGGTGCAAAAAATGAGTTATAGAAACCGTAGTTCCGTGTCATATTTGTTTGATCAATGGGGATTTTGATTTATAAATGCAATATCCGACACGAGTTTCATGAGTTTGGGTTCATTAAGTCGCGATAGCAAACCTGTAGCTTGGGACAAGTAAATTTATATTAAGTAGATTCATCTTCTTTATCTGGAGGTTCACAAAGTTAGAGAAGTCCCTGCCCTTGACCCCACTCCCAACCACACATACACACACACACAAAAAGGTTCACAAAGTTGATTTTGATTCCTTGTTTTTCGATGCAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTCCAAGCACATCGTGTTGCTCGTAGAACGTCGTTGTTCTACTCTTAAGATGTCTGCAGAATGACCTCCATTTGTATGCAGAATTCTTAAGGAAAAGTGAAAAAAAAAAGGGTTGTTGATGTTGAATTTATTATGATGTGTAAATTGACTGCTGTGTTTAGATGATATGCTTCTTTTGCAGCCACCACAAATGTGGCAGACTCACTACTTTGTGTTTATATGATGACCTTCTGCTTGCTTCACACATGCACAGTTTTCTTGGCTTCTTTTTTTTCATTGGGGTAAACTTTGGAATTGGTCACTTGCCTATATGGAATGACTTTTCACGTGTTTAAAAGACTTTATTAAGTACTTGAAAAGTCATTTTTAATAGATTATGAAGAGAG AAGAAAGAGAGAAAATGCAAAGGAAATAAATTTAATTTTCAATCGCTGTCGTGCGTAATCGAGTTGTTCTTGTTATTGTTCATCTTGAGGAGGGAGAAAAGAGGGCGTGTTTTGCTTCCAAGAGAGAGACAGGCATCTGTCTTGATTGTTTTGATTCATTCTTAACCATTTTTGTTCTGTCAACGCCTGTTCTTCCACGATTCTCTTCGATTTTTGTCTCGATTGCGGTTTACGGCCATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGAATCGACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATATGTTGGATTCTAGGAGTGACGCTCAAACGTATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTCCAAGCACATCGTGTTGCTCGTAGAACGTCGTTGTTCTACTCTTAAGATGTCTGCAGAATGACCTCCATTTGTATGCAGAATTCTTAAGGAAAAGTGAAAAAAAAAAGGGTTGTTGATGTTGAATTTATTATGATGTGTAAATTGACTGCTGTGTTTAGATGATATGCTTCTTTTGCAGCCACCACAAATGTGGCAGACTCACTACTTTGTGTTTATATGATGACCTTCTGCTTGCTTCACACATGCACAGTTTTCTTGGCTTCTTTTTTTTCATTGGGGTAAACTTTGGAATTGGTCACTTGCCTATATGGAATGACTTTTCACGTGTTTAAAAGACTTTATTAAGTACTTGAAAAGTCATTTTTAATAGATTATGAAGAGAG ATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGAATCGACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATATGTTGGATTCTAGGAGTGACGCTCAAACGTATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTCCAAGCACATCGTGTTGCTCGTAG MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKSDMLDSRSDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVPSTSCCS Homology
BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot
Match: Q9SN68 (Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 2.9e-89 Identity = 169/200 (84.50%), Postives = 183/200 (91.50%), Query Frame = 0
BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot
Match: P31582 (Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 2.7e-87 Identity = 167/200 (83.50%), Postives = 180/200 (90.00%), Query Frame = 0
BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot
Match: Q0ILQ6 (Ras-related protein Rab5A OS=Oryza sativa subsp. japonica OX=39947 GN=RAB5A PE=1 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 5.8e-82 Identity = 163/201 (81.09%), Postives = 178/201 (88.56%), Query Frame = 0
BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot
Match: P31583 (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 5.8e-82 Identity = 158/200 (79.00%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot
Match: P29687 (Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 2.5e-80 Identity = 153/200 (76.50%), Postives = 173/200 (86.50%), Query Frame = 0
BLAST of CmaCh13G004410 vs. ExPASy TrEMBL
Match: A0A6J1KP17 (ras-related protein RABF2b-like OS=Cucurbita maxima OX=3661 GN=LOC111495218 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.5e-101 Identity = 195/199 (97.99%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of CmaCh13G004410 vs. ExPASy TrEMBL
Match: A0A6J1EHC6 (ras-related protein RABF2b-like OS=Cucurbita moschata OX=3662 GN=LOC111434185 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100 Identity = 194/199 (97.49%), Postives = 194/199 (97.49%), Query Frame = 0
BLAST of CmaCh13G004410 vs. ExPASy TrEMBL
Match: A0A6J1CLQ7 (ras-related protein RABF2b OS=Momordica charantia OX=3673 GN=LOC111012759 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 9.3e-99 Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of CmaCh13G004410 vs. ExPASy TrEMBL
Match: A0A1S3C8W6 (ras-related protein RABF2b OS=Cucumis melo OX=3656 GN=LOC103498306 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 9.3e-99 Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of CmaCh13G004410 vs. ExPASy TrEMBL
Match: A0A6J1GV53 (ras-related protein RABF2b OS=Cucurbita moschata OX=3662 GN=LOC111457198 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.5e-98 Identity = 189/199 (94.97%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of CmaCh13G004410 vs. NCBI nr
Match: XP_023000928.1 (ras-related protein RABF2b-like [Cucurbita maxima]) HSP 1 Score: 378.6 bits (971), Expect = 3.2e-101 Identity = 195/199 (97.99%), Postives = 195/199 (97.99%), Query Frame = 0
BLAST of CmaCh13G004410 vs. NCBI nr
Match: XP_022927321.1 (ras-related protein RABF2b-like [Cucurbita moschata] >XP_023519554.1 ras-related protein RABF2b-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6583806.1 Ras-related protein RABF2b, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 375.6 bits (963), Expect = 2.7e-100 Identity = 194/199 (97.49%), Postives = 194/199 (97.49%), Query Frame = 0
BLAST of CmaCh13G004410 vs. NCBI nr
Match: XP_038895356.1 (ras-related protein RABF2b [Benincasa hispida]) HSP 1 Score: 370.9 bits (951), Expect = 6.6e-99 Identity = 191/199 (95.98%), Postives = 192/199 (96.48%), Query Frame = 0
BLAST of CmaCh13G004410 vs. NCBI nr
Match: XP_022142715.1 (ras-related protein RABF2b [Momordica charantia]) HSP 1 Score: 369.4 bits (947), Expect = 1.9e-98 Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of CmaCh13G004410 vs. NCBI nr
Match: XP_008459092.1 (PREDICTED: ras-related protein RABF2b [Cucumis melo]) HSP 1 Score: 369.4 bits (947), Expect = 1.9e-98 Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of CmaCh13G004410 vs. TAIR 10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 329.3 bits (843), Expect = 2.1e-90 Identity = 169/200 (84.50%), Postives = 183/200 (91.50%), Query Frame = 0
BLAST of CmaCh13G004410 vs. TAIR 10
Match: AT5G45130.1 (RAB homolog 1 ) HSP 1 Score: 322.8 bits (826), Expect = 1.9e-88 Identity = 167/200 (83.50%), Postives = 180/200 (90.00%), Query Frame = 0
BLAST of CmaCh13G004410 vs. TAIR 10
Match: AT3G54840.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52 Identity = 102/171 (59.65%), Postives = 131/171 (76.61%), Query Frame = 0
BLAST of CmaCh13G004410 vs. TAIR 10
Match: AT3G54840.2 (Ras-related small GTP-binding family protein ) HSP 1 Score: 190.3 bits (482), Expect = 1.5e-48 Identity = 94/159 (59.12%), Postives = 123/159 (77.36%), Query Frame = 0
BLAST of CmaCh13G004410 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D ) HSP 1 Score: 152.9 bits (385), Expect = 2.6e-37 Identity = 79/199 (39.70%), Postives = 121/199 (60.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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