CmaCh13G004410 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G004410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ras-related protein Rab-5A
Location	Cma_Chr13: 4953641 .. 4957509 (+)
RNA-Seq Expression	CmaCh13G004410
Synteny	CmaCh13G004410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAAGAGAGAAAATGCAAAGGAAATAAATTTAATTTTCAATCGCTGTCGTGCGTAATCGAGTTGTTCTTGTTATTGTTCATCTTGAGGAGGGAGAAAAGAGGGCGTGTTTTGCTTCCAAGAGAGAGACAGGCATCTGTCTTGATTGTTTTGATTCATTCTTAACCATTTTTGTTCTGTCAACGCCTGTTCTTCCACGATTCTCTTCGATTTTTGTCTCGATTGCGGTTTACGGCCATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGAGGCTTTTCTCCCCTTTTTGATTTTTAAAGTTTGATTTCTTTTTTCTGTCCGGATTTTGATGCCAAATCGCGATGTGGGTCTCTTTGATTTTCCTTTTCCGGAATTGGGTTTTCATTATTGTTCTTCTTTTCATCGTCAATTCGATTTGGCTTAATCCTTGGTAGTCTTGATTTGTGGCTGAATTCTGATCTAGGGTTTTGTTTTGTTCGCGAATAACTGAATTTTTTTCTGGTTTGATTGTATTTCTGTTGGTTGTAATTACGAAATCTCTGTTTGCATTCTCTATATATCATTAACTTCTGATGATTGTTGGGATAATCCCTTTCCAATTTATAATTCGGTCGTGATCTAAGTTACTTCTCTGCATTTTAATTAGCAGAACGTTCAGTAGGATCGTGACTATTGCCCTTAGTTTCAGCAATCAATTTTATTAGACGGTATCCCTTTTTGAGATTTTTTTACATGTTCTTCCCCTCTTTGTCCAATTCTGAAATTAAATCATAAATTTTATTGACCTCATATTATGCTTGCCCCTGATTTTACTATCCAATTGTCTCACTTCAATGGCTATCATACATGGAATGTTATTTGTTGAAAAAAGAAGGGGCTGGATGGACTATGTCTAGCTACAACTATTTTGGAACAACACATGAAATCCAGTTTATTTTACTTTCATTTTTCGCTCAGGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGTTTGTATTATAAACCATTTGGATTTGGCTGTTGAAATTTTTGAAATGTCTTTCTGTCTTGGTCGTCTGTAATCTTTTTAATTGTTCAATTATGTAGGAATCGACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGTAAGTGGCGTTTGAAAACTCTTGATTGGTTGCATATGGTCTGAGAACAAAATAATTGTAATTGTGCTTGGGCATTACATCTTCAAATTCATTGTACAAGCCATCAGCCATTTCCGTGAAATATGTTTGGGATGAAAAAGTGTTATGATGTGTCTATGAATTAAGAACCAACCATTTGTTTTTATAATTAATTGCTAAAAGAACTTAGAAGTTGTAACGGCCCAAGTCCACCACTAGTCTATATTGTCCTCTTTGGGCTTTTCCTTTTGAGTTTCTTCTCAAGGTTTTTAAAACGCGTATGCTAGTGAGAGGTTTCCACATCTTTATAAAGAATGTTTTGTCCTCCTCCCCAACCAATGTGGGATTTCACAATCCACCCCCTTCTGGGCCCAGCGTTCTTGCTGGCACTTGTTCCCTTCTCTAATCAATGTGGGACCCCCAATCCACCCTCTCTAGTCCACCTCCCTTTGGGGCTCAGCCTCTTCACTGGCACATCGTCTAGTGTCTGGCTCTGATACCATTTGTAACTGCACAAGCCCACCGCTAGCGGATAGTGTCCTCTTTGGGCTTCTCCTTAAGGTTTTTAAAACGCGTTTGCTAAAGAGAGGTTTCTACGTCCTTATAAAGAATGTTTTGTTCTCCTCCCCAACCGACGTGAAATCTCACCTAAGTTCTTTTTCATTTTTAATCATTTAAAAAAAATGATGGGAGTTAACAAAATCTTTGAAATTTACCAACAGGTATTTGACTTACGAAAAGGAAACTTCAACAGAATTGATGTTTTGAACTTTTAACCAAGTGGGGGCTTTTGTGAAGTTATTAAGAGGCTTAGAGATAAATAAATCATGTCATGATGGTGCTTGATAAAGGAAACAGTGATGGGTTTGTATATGACCTGAAATGGGATCCTGTGTGTGTGTATTAGAGCGGGGAGCTAGGAGTAAAGCCTTTTTAGGAGTTCTTACCCTTCTGAAAAGCGACATACTCTATACATATCAGGCTTCACTAGGGATTATTTATCCTTTTATATACTACTGTAATTGAATTACAATTTTTATCCTTTTCATACCTCAACTCTTGTGTGTAACCTCTATTTGATCGTAGGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGTAGTCTTACTGTTGGGTGCCCTAAATTTACATTGGAAGAGCATCTGGATTGAACATTCTGTAAACTTTTAGCAAGTGAAATTAGTGTGGCAGTTGTCTACCTTATTTTTTTTACCAATTGGATCATCTCCTTTTATCAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATATGTTGGATTCTAGGAGTGTTGCTGCAGAGGCAAGTACTCCCAACCCCAGTTTTCTTTATTCTGTAGTACTTTGTTGAACTGGGATGCATTTCATACAAATAAAAAAGTATATTTCTGCTAGTGACGATCTTCTCTAGTTGGAATTTTGTGATTTTTTTGTACTAAGCTGTGACAATTGGTTCAATTGTTGCTCGTGTAATTGTGCATCATACAGGACGCTCAAACGTATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGGTTAGTAACTAGGACATATGAGTTCAAGGGACTGCCCCCGCCCCCCACCCCCCTACCGAAATAAAAGAGCTGAAACAAGATTTCTCTTTTATGCTTACGATATCTCTGGGTCGTAGACTTAAACAAGATTTGAGTTCTAAATTTGTATTTGACGGGATGGTGCAAAAAATGAGTTATAGAAACCGTAGTTCCGTGTCATATTTGTTTGATCAATGGGGATTTTGATTTATAAATGCAATATCCGACACGAGTTTCATGAGTTTGGGTTCATTAAGTCGCGATAGCAAACCTGTAGCTTGGGACAAGTAAATTTATATTAAGTAGATTCATCTTCTTTATCTGGAGGTTCACAAAGTTAGAGAAGTCCCTGCCCTTGACCCCACTCCCAACCACACATACACACACACACAAAAAGGTTCACAAAGTTGATTTTGATTCCTTGTTTTTCGATGCAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTCCAAGCACATCGTGTTGCTCGTAGAACGTCGTTGTTCTACTCTTAAGATGTCTGCAGAATGACCTCCATTTGTATGCAGAATTCTTAAGGAAAAGTGAAAAAAAAAAGGGTTGTTGATGTTGAATTTATTATGATGTGTAAATTGACTGCTGTGTTTAGATGATATGCTTCTTTTGCAGCCACCACAAATGTGGCAGACTCACTACTTTGTGTTTATATGATGACCTTCTGCTTGCTTCACACATGCACAGTTTTCTTGGCTTCTTTTTTTTCATTGGGGTAAACTTTGGAATTGGTCACTTGCCTATATGGAATGACTTTTCACGTGTTTAAAAGACTTTATTAAGTACTTGAAAAGTCATTTTTAATAGATTATGAAGAGAG

mRNA sequence

AAGAAAGAGAGAAAATGCAAAGGAAATAAATTTAATTTTCAATCGCTGTCGTGCGTAATCGAGTTGTTCTTGTTATTGTTCATCTTGAGGAGGGAGAAAAGAGGGCGTGTTTTGCTTCCAAGAGAGAGACAGGCATCTGTCTTGATTGTTTTGATTCATTCTTAACCATTTTTGTTCTGTCAACGCCTGTTCTTCCACGATTCTCTTCGATTTTTGTCTCGATTGCGGTTTACGGCCATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGAATCGACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATATGTTGGATTCTAGGAGTGACGCTCAAACGTATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTCCAAGCACATCGTGTTGCTCGTAGAACGTCGTTGTTCTACTCTTAAGATGTCTGCAGAATGACCTCCATTTGTATGCAGAATTCTTAAGGAAAAGTGAAAAAAAAAAGGGTTGTTGATGTTGAATTTATTATGATGTGTAAATTGACTGCTGTGTTTAGATGATATGCTTCTTTTGCAGCCACCACAAATGTGGCAGACTCACTACTTTGTGTTTATATGATGACCTTCTGCTTGCTTCACACATGCACAGTTTTCTTGGCTTCTTTTTTTTCATTGGGGTAAACTTTGGAATTGGTCACTTGCCTATATGGAATGACTTTTCACGTGTTTAAAAGACTTTATTAAGTACTTGAAAAGTCATTTTTAATAGATTATGAAGAGAG

Coding sequence (CDS)

ATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGAATCGACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAATAAATCAGATATGTTGGATTCTAGGAGTGACGCTCAAACGTATGCGCAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTCCAAGCACATCGTGTTGCTCGTAG

Protein sequence

MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKSDMLDSRSDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVPSTSCCS

Homology

[Close]

BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot
Match: Q9SN68 (Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 2.9e-89
Identity = 169/200 (84.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA +GNK+INAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSD+LD+R     DAQTYAQENGLFFMETSAK+A NV +IFYEIA+RLPRVQP +N 
Sbjct: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180

Query: 181 PGMVL-DRPAERVPSTSCCS 196
            GMVL DR  +R  S+SCC+
Sbjct: 181 TGMVLPDRAMDRAVSSSCCA 200

[Close]

BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot
Match: P31582 (Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 2.7e-87
Identity = 167/200 (83.50%), Postives = 180/200 (90.00%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+SGNKNINAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNK+D+LD+R     +A+ YAQEN LFFMETSAK+A NV DIFYEIAKRLPRVQP +N 
Sbjct: 121 AGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENP 180

Query: 181 PGMVL-DRPAERVPSTSCCS 196
            GMVL + P     S+SCC+
Sbjct: 181 TGMVLPNGPGATAVSSSCCA 200

[Close]

BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot
Match: Q0ILQ6 (Ras-related protein Rab5A OS=Oryza sativa subsp. japonica OX=39947 GN=RAB5A PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 5.8e-82
Identity = 163/201 (81.09%), Postives = 178/201 (88.56%), Query Frame = 0


Query: 2   ATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKF 61
           A  GNK  NAKLVLLGDVG GKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVND TVKF
Sbjct: 3   ANPGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKF 62

Query: 62  EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALA 121
           EIWDTAGQERYHSLAPMYYRGAAAAI+VYDITN ASF RAKKWVQELQAQGNPN +MALA
Sbjct: 63  EIWDTAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAKKWVQELQAQGNPNTIMALA 122

Query: 122 GNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNTP 181
           GNK+DM+++R     +A+TYAQENGLFFMETSAK+A NVND+F+EIAKRL + Q  Q+TP
Sbjct: 123 GNKADMVEARQVPAEEAKTYAQENGLFFMETSAKTAINVNDVFHEIAKRLLQGQQAQDTP 182

Query: 182 -GMVLD-RPAER-VPSTSCCS 196
            GMVL+ RPAER V S+SCCS
Sbjct: 183 AGMVLNQRPAERMVSSSSCCS 203

[Close]

BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot
Match: P31583 (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 5.8e-82
Identity = 158/200 (79.00%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+S + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS TLAVN+ATVK
Sbjct: 1   MASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+  SF RAKKWVQELQ QGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNK+D+ D R     +A+ YA+ENGLFFMETSAK+A NVN IFYEIAKRLPR QP QN 
Sbjct: 121 AGNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAKRLPRAQPAQNP 180

Query: 181 PGMVL-DRPAERVPSTSCCS 196
            GMVL DR AE   +TSCC+
Sbjct: 181 AGMVLVDRAAEGTRATSCCT 200

[Close]

BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot
Match: P29687 (Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.5e-80
Identity = 153/200 (76.50%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+  + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS T++VN+ATVK
Sbjct: 1   MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+  S  RAKKWVQELQ QGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSTESLARAKKWVQELQKQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNK+D+ D R     +A+ YA+ENGLFFMETSAK+A NVNDIFYEIAKRLPR QP QN 
Sbjct: 121 AGNKADLEDKRKVTAEEARLYAEENGLFFMETSAKTATNVNDIFYEIAKRLPRAQPAQNP 180

Query: 181 PGMVL-DRPAERVPSTSCCS 196
            GMVL D+PA+   + SCC+
Sbjct: 181 AGMVLEDKPAQGSQAASCCT 200

[Close]

BLAST of CmaCh13G004410 vs. ExPASy TrEMBL
Match: A0A6J1KP17 (ras-related protein RABF2b-like OS=Cucurbita maxima OX=3661 GN=LOC111495218 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.5e-101
Identity = 195/199 (97.99%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRS----DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSDMLDSRS    DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT
Sbjct: 121 AGNKSDMLDSRSVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180

Query: 181 PGMVLDRPAERVPSTSCCS 196
           PGMVLDRPAERVPSTSCCS
Sbjct: 181 PGMVLDRPAERVPSTSCCS 199

[Close]

BLAST of CmaCh13G004410 vs. ExPASy TrEMBL
Match: A0A6J1EHC6 (ras-related protein RABF2b-like OS=Cucurbita moschata OX=3662 GN=LOC111434185 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100
Identity = 194/199 (97.49%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRS----DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSDMLDSRS    DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT
Sbjct: 121 AGNKSDMLDSRSVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180

Query: 181 PGMVLDRPAERVPSTSCCS 196
           PGMVLDRPAERV STSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmaCh13G004410 vs. ExPASy TrEMBL
Match: A0A6J1CLQ7 (ras-related protein RABF2b OS=Momordica charantia OX=3673 GN=LOC111012759 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 9.3e-99
Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ SFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSD+LDSR     DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQN 
Sbjct: 121 AGNKSDLLDSRKVAVEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVPSTSCCS 196
           PGMVLDRPAERV STSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmaCh13G004410 vs. ExPASy TrEMBL
Match: A0A1S3C8W6 (ras-related protein RABF2b OS=Cucumis melo OX=3656 GN=LOC103498306 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 9.3e-99
Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ SFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSD+LDSR     DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQN 
Sbjct: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVPSTSCCS 196
           PGMVLDRPAERV STSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmaCh13G004410 vs. ExPASy TrEMBL
Match: A0A6J1GV53 (ras-related protein RABF2b OS=Cucurbita moschata OX=3662 GN=LOC111457198 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.5e-98
Identity = 189/199 (94.97%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSD+LDSR     DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQN 
Sbjct: 121 AGNKSDLLDSRKVSAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVPSTSCCS 196
           PGMVLDRPAERV S SCCS
Sbjct: 181 PGMVLDRPAERVASASCCS 199

[Close]

BLAST of CmaCh13G004410 vs. NCBI nr
Match: XP_023000928.1 (ras-related protein RABF2b-like [Cucurbita maxima])

HSP 1 Score: 378.6 bits (971), Expect = 3.2e-101
Identity = 195/199 (97.99%), Postives = 195/199 (97.99%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRS----DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSDMLDSRS    DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT
Sbjct: 121 AGNKSDMLDSRSVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180

Query: 181 PGMVLDRPAERVPSTSCCS 196
           PGMVLDRPAERVPSTSCCS
Sbjct: 181 PGMVLDRPAERVPSTSCCS 199

[Close]

BLAST of CmaCh13G004410 vs. NCBI nr
Match: XP_022927321.1 (ras-related protein RABF2b-like [Cucurbita moschata] >XP_023519554.1 ras-related protein RABF2b-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6583806.1 Ras-related protein RABF2b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 375.6 bits (963), Expect = 2.7e-100
Identity = 194/199 (97.49%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSRS----DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSDMLDSRS    DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT
Sbjct: 121 AGNKSDMLDSRSVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180

Query: 181 PGMVLDRPAERVPSTSCCS 196
           PGMVLDRPAERV STSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmaCh13G004410 vs. NCBI nr
Match: XP_038895356.1 (ras-related protein RABF2b [Benincasa hispida])

HSP 1 Score: 370.9 bits (951), Expect = 6.6e-99
Identity = 191/199 (95.98%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSD+LDSR     DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQN 
Sbjct: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVPSTSCCS 196
           PGMVLDRPAERV STSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmaCh13G004410 vs. NCBI nr
Match: XP_022142715.1 (ras-related protein RABF2b [Momordica charantia])

HSP 1 Score: 369.4 bits (947), Expect = 1.9e-98
Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ SFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSD+LDSR     DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQN 
Sbjct: 121 AGNKSDLLDSRKVAVEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVPSTSCCS 196
           PGMVLDRPAERV STSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmaCh13G004410 vs. NCBI nr
Match: XP_008459092.1 (PREDICTED: ras-related protein RABF2b [Cucumis melo])

HSP 1 Score: 369.4 bits (947), Expect = 1.9e-98
Identity = 190/199 (95.48%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ SFDRAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQGSFDRAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSD+LDSR     DAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQN 
Sbjct: 121 AGNKSDLLDSRKVAAEDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNA 180

Query: 181 PGMVLDRPAERVPSTSCCS 196
           PGMVLDRPAERV STSCCS
Sbjct: 181 PGMVLDRPAERVASTSCCS 199

[Close]

BLAST of CmaCh13G004410 vs. TAIR 10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 329.3 bits (843), Expect = 2.1e-90
Identity = 169/200 (84.50%), Postives = 183/200 (91.50%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA +GNK+INAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNKSD+LD+R     DAQTYAQENGLFFMETSAK+A NV +IFYEIA+RLPRVQP +N 
Sbjct: 121 AGNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEIARRLPRVQPTENP 180

Query: 181 PGMVL-DRPAERVPSTSCCS 196
            GMVL DR  +R  S+SCC+
Sbjct: 181 TGMVLPDRAMDRAVSSSCCA 200

[Close]

BLAST of CmaCh13G004410 vs. TAIR 10
Match: AT5G45130.1 (RAB homolog 1 )

HSP 1 Score: 322.8 bits (826), Expect = 1.9e-88
Identity = 167/200 (83.50%), Postives = 180/200 (90.00%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+SGNKNINAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMAL 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQASF+RAKKWVQELQAQGNPNMVMAL
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMAL 120

Query: 121 AGNKSDMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNT 180
           AGNK+D+LD+R     +A+ YAQEN LFFMETSAK+A NV DIFYEIAKRLPRVQP +N 
Sbjct: 121 AGNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENP 180

Query: 181 PGMVL-DRPAERVPSTSCCS 196
            GMVL + P     S+SCC+
Sbjct: 181 TGMVLPNGPGATAVSSSCCA 200

[Close]

BLAST of CmaCh13G004410 vs. TAIR 10
Match: AT3G54840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52
Identity = 102/171 (59.65%), Postives = 131/171 (76.61%), Query Frame = 0


Query: 7   KNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 66
           KN+  KLVLLGD G GKS +VLRFV+GQF    + T+GA+F SQT+A+ D+ TVKFEIWD
Sbjct: 30  KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89

Query: 67  TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKS 126
           TAGQERY +LAP+YYRGA  A+IVYDIT+  SF +A+ WV+ELQ  G+P++VMAL GNK+
Sbjct: 90  TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149

Query: 127 DMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQP 173
           D+ + R     D    A++NG+FF+ETSAK+A N+N +F EI KRLPR  P
Sbjct: 150 DLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLFEEIGKRLPRPAP 200

[Close]

BLAST of CmaCh13G004410 vs. TAIR 10
Match: AT3G54840.2 (Ras-related small GTP-binding family protein )

HSP 1 Score: 190.3 bits (482), Expect = 1.5e-48
Identity = 94/159 (59.12%), Postives = 123/159 (77.36%), Query Frame = 0


Query: 7   KNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 66
           KN+  KLVLLGD G GKS +VLRFV+GQF    + T+GA+F SQT+A+ D+ TVKFEIWD
Sbjct: 30  KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89

Query: 67  TAGQERYHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKS 126
           TAGQERY +LAP+YYRGA  A+IVYDIT+  SF +A+ WV+ELQ  G+P++VMAL GNK+
Sbjct: 90  TAGQERYSALAPLYYRGAGVAVIVYDITSPESFKKAQYWVKELQKHGSPDIVMALVGNKA 149

Query: 127 DMLDSR----SDAQTYAQENGLFFMETSAKSAANVNDIF 161
           D+ + R     D    A++NG+FF+ETSAK+A N+N +F
Sbjct: 150 DLHEKREVPTEDGMELAEKNGMFFIETSAKTADNINQLF 188

[Close]

BLAST of CmaCh13G004410 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 152.9 bits (385), Expect = 2.6e-37
Identity = 79/199 (39.70%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 12  KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
           K+VL+GD G GKS+L+ RF + +F    +STIG  F +++L VN+  +K +IWDTAGQER
Sbjct: 15  KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQER 74

Query: 72  YHSLAPMYYRGAAAAIIVYDITNQASFDRAKKWVQELQAQGNPNMVMALAGNKSDMLD-- 131
           Y ++   YYRGA  A++VYD+T  ++F+  ++W++EL+   +PN+V+ L GNKSD+    
Sbjct: 75  YRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLV 134

Query: 132 --SRSDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRV---------QPVQNTP- 191
                DA+++A+   L+FMETSA  + NV + F E+  ++  V         +   N P 
Sbjct: 135 AVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGEDSGNVPS 194

Query: 192 -GMVLDRPAERVPSTSCCS 196
            G  +D     V  T CCS
Sbjct: 195 KGEKIDVDVSAVKKTGCCS 213

The following BLAST results are available for this feature:

BLAST of CmaCh13G004410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN68	2.9e-89	84.50	Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1	[more]
P31582	2.7e-87	83.50	Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1	[more]
Q0ILQ6	5.8e-82	81.09	Ras-related protein Rab5A OS=Oryza sativa subsp. japonica OX=39947 GN=RAB5A PE=1...	[more]
P31583	5.8e-82	79.00	Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1	[more]
P29687	2.5e-80	76.50	Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1	[more]

BLAST of CmaCh13G004410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KP17	1.5e-101	97.99	ras-related protein RABF2b-like OS=Cucurbita maxima OX=3661 GN=LOC111495218 PE=4...	[more]
A0A6J1EHC6	1.3e-100	97.49	ras-related protein RABF2b-like OS=Cucurbita moschata OX=3662 GN=LOC111434185 PE...	[more]
A0A6J1CLQ7	9.3e-99	95.48	ras-related protein RABF2b OS=Momordica charantia OX=3673 GN=LOC111012759 PE=4 S...	[more]
A0A1S3C8W6	9.3e-99	95.48	ras-related protein RABF2b OS=Cucumis melo OX=3656 GN=LOC103498306 PE=4 SV=1	[more]
A0A6J1GV53	3.5e-98	94.97	ras-related protein RABF2b OS=Cucurbita moschata OX=3662 GN=LOC111457198 PE=4 SV...	[more]

BLAST of CmaCh13G004410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000928.1	3.2e-101	97.99	ras-related protein RABF2b-like [Cucurbita maxima]	[more]
XP_022927321.1	2.7e-100	97.49	ras-related protein RABF2b-like [Cucurbita moschata] >XP_023519554.1 ras-related...	[more]
XP_038895356.1	6.6e-99	95.98	ras-related protein RABF2b [Benincasa hispida]	[more]
XP_022142715.1	1.9e-98	95.48	ras-related protein RABF2b [Momordica charantia]	[more]
XP_008459092.1	1.9e-98	95.48	PREDICTED: ras-related protein RABF2b [Cucumis melo]	[more]

BLAST of CmaCh13G004410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19640.1	2.1e-90	84.50	Ras-related small GTP-binding family protein	[more]
AT5G45130.1	1.9e-88	83.50	RAB homolog 1	[more]
AT3G54840.1	1.0e-52	59.65	Ras-related small GTP-binding family protein	[more]
AT3G54840.2	1.5e-48	59.12	Ras-related small GTP-binding family protein	[more]
AT4G18800.1	2.6e-37	39.70	RAB GTPase homolog A1D	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 114..127 score: 43.62 coord: 34..50 score: 30.56 coord: 11..32 score: 47.13 coord: 145..167 score: 40.38 coord: 52..74 score: 46.26
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 16..193 e-value: 8.7E-6 score: 32.7
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 12..170 e-value: 1.1E-22 score: 91.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 11..170 e-value: 4.9E-73 score: 258.6
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..195
None	No IPR available	PANTHER	PTHR24073:SF1090	RAS-RELATED PROTEIN RABF2B	coord: 1..195
None	No IPR available	PROSITE	PS51419	RAB	coord: 6..194 score: 30.599342
None	No IPR available	CDD	cd01860	Rab5_related	coord: 10..168 e-value: 6.51933E-111 score: 311.793
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 13..170 e-value: 2.4E-10 score: 13.3
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 12..167 e-value: 5.4E-55 score: 185.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..181 score: 15.221788
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..163 e-value: 1.9E-26 score: 90.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 2..186 e-value: 2.3E-61 score: 208.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G004410.1	CmaCh13G004410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0030139	endocytic vesicle
cellular_component	GO:0005768	endosome
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding