CmaCh12G009360 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G009360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	prefoldin subunit 1
Location	Cma_Chr12: 7281190 .. 7283436 (+)
RNA-Seq Expression	CmaCh12G009360
Synteny	CmaCh12G009360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTTACATCGGACCCTAAAAATTTTCAAACATTCATATTCGTAATTCGCAGAGTTGTAATCAAAGATCGTCTACTTGAATTCTGAATCTTCGCAATGGCGGACGAGGCGAACAGAGCTGTGAGTACTTTTTTCACTCTTCTCATCTTGTTTTTCCACTCGCCTCTGCCATTTTCCCGATGCATGAACTCTTGATTTTGTTTCTGGAATCAGACATTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGGTAATCTCCTTTCATTTTTCACTTAATTTTTTTGTACTTACTGTCTAGATTGTTCTTATTCATATTCGTGTTTAATTACTAAAGTAAACGAATGTTTCCTAGGTTAACTGATGAATCCAATCAATGTTCGTATTTCCAGTTCTGTCATTCTTCGATGTTTCGCTTTATTTGAATGGAGAGTTCTTGATTTATGAGTTCAAGCTGGTGTTCTTTCTCCTTGCTTTGCAGGTGCAAAGTCAGGTACGAAACAAGGAGGGAGAAAAGAAGCGTGCCTTTTTAACCTTGGAGGAACTTAAACAGTTGTCCGATGACACCAATGCGTACAAATCGATAGGTACTTGACAAATCTGTATTTTGTAACTGGAAATTTGTTCATTCTTTGCCTCAATCGTGATTACTTATCATTGATTTCTTTCCATCATTCTTTGTGGTGCAGGGAGAGCGTGAGTTATGCTACAATTGATCGATCCAGTTAAAGTTAGATTTTCATTTATCTCATAGTATATATATGAAATTCTCTTACTTTGTGTTGTCTCATCCTGACCAGGTTTGTTTTAGAGCCGAAATCGGTTCTAATGGCGGAACAGGAGCAAAAGCTCAAGGATAGTGAAGCTGCAATTGTATCACTGCAGGTTCATATTAGTATTACTTTCATCTGTAGAGACGAAATCTTCCTTTGAGCATTTTTCATTCACTAACTAACATTTTCTTGCTCTTCTATGTTCTATGTGTAATGACCCTAGATTTTTACTAACCTAAAGTCGCTACTATCATCATACTATACTCTCTTATACGGAAAATAAACCTTGAAAATATTGTCGTAAAACATTGCCATGGACTTGTAGGTTCGAAATCATCTTTAAAAGAACCTAAGGAAATACTAAATAAAACAAGTAAAACATTAAAAGTAACAACACCCTATACTAACCTAAAGTCTAAGAAATGAAATACCACTATCCTATGCACGTGTCATAGTCTCTACTAGCGATGCCCTCGTCAACTGTACAAGGGTACCTTGTCTTTACCTGAAATAGAAGTAGCACACGGCTTGAGTATTTTAAGAAATATTCAGTAAGTGGGGGTCAGGGAATGCAAACACATGCAATTCATGATTAGAGACCCATCGTTAAAATCATCATAGGGGTCGTTACACTATGTTTTCTCGAAATTTTAATTCTTGCATTAACACAGAATCCACACACACACAAAAGGGTATTTCTTATGAGGATCTGGGCATATTCAAACACTTCTTTGAACGAATTACGTTCTGTGAAGAGTTTGATGTCATTAATGCTATCCTCTTTCTTGCCAACTAGAACTTAGCTCAAGCATGCACAAAAAATTCTTGGCTTTCAATTCTTTCTTGCCAATTTGAACTTAGCTCAATCTGGGAAGGCATATACACGCACAATATTCTTGACATCTAATTGAAAGCGAACTTACTTTTCTGTTTTGGCATCTAATTGAAAGCGAACGAATCACGTTATTTGACTGGTAGAGGTGTCGTTACCAAGAGATTTGGAGAGTAGGCTGAACTTTTGTGATTTACACTATTTGGCAATGTTCTTATTTAATCTTTGATAAATGGCATTTGGGTATTTTTTTTTGATTATGGGTTCATGGAAGATGGTTTTTTTGCACATTTGCAGAGCTCAAAGGAGTATCTAGAGAAGCAAAAGGCGGAGGTGGAGAACAACTTGAAGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGACTGTAGCATAAGACATGCTCTCCTCTCTCCATTTGAATCTGAAATTAGCTGATCTTGTTCACAAGAATTTTAGTTTGTTGGTTGCTGTGTTATTCTGATGCCTAAACTCTGTTTCATATGCATTACATACTCCTTAAGTTCCCAGTTCTGTCAAGGGATACGTTCGAAATTTCTTAATTAGATAATGGATAGAATGCCCAAAAATGATTCTCCATTCTCTCTCTCTTTT

mRNA sequence

CAGTTACATCGGACCCTAAAAATTTTCAAACATTCATATTCGTAATTCGCAGAGTTGTAATCAAAGATCGTCTACTTGAATTCTGAATCTTCGCAATGGCGGACGAGGCGAACAGAGCTACATTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGGTGCAAAGTCAGGTACGAAACAAGGAGGGAGAAAAGAAGCGTGCCTTTTTAACCTTGGAGGAACTTAAACAGTTGTCCGATGACACCAATGCGTACAAATCGATAGGGAGAGCGTTTGTTTTAGAGCCGAAATCGGTTCTAATGGCGGAACAGGAGCAAAAGCTCAAGGATAGTGAAGCTGCAATTGTATCACTGCAGAGCTCAAAGGAGTATCTAGAGAAGCAAAAGGCGGAGGTGGAGAACAACTTGAAGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGACTGTAGCATAAGACATGCTCTCCTCTCTCCATTTGAATCTGAAATTAGCTGATCTTGTTCACAAGAATTTTAGTTTGTTGGTTGCTGTGTTATTCTGATGCCTAAACTCTGTTTCATATGCATTACATACTCCTTAAGTTCCCAGTTCTGTCAAGGGATACGTTCGAAATTTCTTAATTAGATAATGGATAGAATGCCCAAAAATGATTCTCCATTCTCTCTCTCTTTT

Coding sequence (CDS)

ATGGCGGACGAGGCGAACAGAGCTACATTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGGTGCAAAGTCAGGTACGAAACAAGGAGGGAGAAAAGAAGCGTGCCTTTTTAACCTTGGAGGAACTTAAACAGTTGTCCGATGACACCAATGCGTACAAATCGATAGGGAGAGCGTTTGTTTTAGAGCCGAAATCGGTTCTAATGGCGGAACAGGAGCAAAAGCTCAAGGATAGTGAAGCTGCAATTGTATCACTGCAGAGCTCAAAGGAGTATCTAGAGAAGCAAAAGGCGGAGGTGGAGAACAACTTGAAGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGACTGTAGCATAA

Protein sequence

MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIARQIMSMTVA

Homology

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BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot
Match: O60925 (Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 6.1e-11
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRAFV 66
           +  F E+Q ++I+   K+K    Q+      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELL 114
           L+ K  + ++  +K K +E  I  L+  K YLE+   E E+N++E+L
Sbjct: 70  LQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

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BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot
Match: Q3SZE2 (Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRAFV 66
           +  F E+Q ++I+   K+K    Q+      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADVQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELL 114
           L+ K  +  +  +K K +E  I  L+  K YLE+   E E+N++E+L
Sbjct: 70  LQSKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

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BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot
Match: Q9CWM4 (Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRAFV 66
           +  F E+Q ++I+   K+K    Q+      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELL 114
           L+ K V+  +  +K K ++  I  L+  K YLE+   E E+N++E+L
Sbjct: 70  LQSKEVIHNQLLEKQKIAKEKIKELEQKKSYLERSVKEAEDNIREML 116

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BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot
Match: Q5RAM7 (Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRAFV 66
           +  F E+Q ++I+   K+K    Q+      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELL 114
           L+ K  +  +  +K K +E  I  L+  K YLE+   E E+N++E+L
Sbjct: 70  LQSKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot
Match: Q54JS0 (Probable prefoldin subunit 1 OS=Dictyostelium discoideum OX=44689 GN=pfdn1 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.7e-09
Identity = 28/110 (25.45%), Postives = 66/110 (60.00%), Query Frame = 0


Query: 6   NRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRAF 65
           ++  F E + ++  ++  L  ++ +++  E ++K+  +T+ EL+ LS +T  YK++G+ F
Sbjct: 5   DKQAFFETREKLYTLSRSLNIIKQRIQIAENDRKKCLITINELESLSSETKTYKAVGKMF 64

Query: 66  VLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQ 116
           V+ P + L  E +Q+++  E  +  L +  +Y++ Q  + E +L EL+++
Sbjct: 65  VISPMTSLKTELKQQVQKDEEDVKGLINQSKYIDAQITDTERSLNELVRK 114

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BLAST of CmaCh12G009360 vs. ExPASy TrEMBL
Match: A0A6J1HND5 (prefoldin subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111465792 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.6e-59
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120

Query: 121 RQIMSMTVA 130
           RQIMSMTVA
Sbjct: 121 RQIMSMTVA 129

[Close]

BLAST of CmaCh12G009360 vs. ExPASy TrEMBL
Match: A0A6J1FB94 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444061 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 6.9e-58
Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGRAFVLEPKSVLMAEQEQK KDSEAAIVSLQSSKEYLEKQKAEVENNLKEL+QQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKFKDSEAAIVSLQSSKEYLEKQKAEVENNLKELVQQDPGIA 120

Query: 121 RQIMSMTVA 130
           RQIMSM+VA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of CmaCh12G009360 vs. ExPASy TrEMBL
Match: A0A6J1ENI7 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.9e-54
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANRATFLEIQGRMIEITGKLKQVQ+Q+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGR FVLEPKSVLM EQEQKLKDSEAAI SL SSKEYLEKQ AEVENNL+ELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIGSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMTVA 130
           RQIMSM++A
Sbjct: 121 RQIMSMSLA 129

[Close]

BLAST of CmaCh12G009360 vs. ExPASy TrEMBL
Match: A0A6J1D9I1 (prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.9e-53
Identity = 115/129 (89.15%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANR  FLEIQGRMIE+TGKLKQVQ+Q+RNKEGEKKRAFLTLEEL+QLS+DTNAYKS
Sbjct: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGR FVLEPKSVLM EQEQKLKDSEAAI SLQ+SKEYLEKQ AEVENNL+ELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMTVA 130
           RQIMSM+VA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of CmaCh12G009360 vs. ExPASy TrEMBL
Match: A0A0A0LJF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51
Identity = 113/129 (87.60%), Postives = 120/129 (93.02%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADE NRATFLEIQGRMIEITGKLKQ+Q+Q+RNKEGEKKRAFLTLEELKQL++DTN YKS
Sbjct: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGR FVLE KSVLM EQEQK KDSE AI SLQSSKEYLEKQ AEVENNL+ELLQQDPGIA
Sbjct: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMTVA 130
           RQIMSM+VA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of CmaCh12G009360 vs. NCBI nr
Match: XP_022966081.1 (prefoldin subunit 1 [Cucurbita maxima])

HSP 1 Score: 237.3 bits (604), Expect = 7.5e-59
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120

Query: 121 RQIMSMTVA 130
           RQIMSMTVA
Sbjct: 121 RQIMSMTVA 129

[Close]

BLAST of CmaCh12G009360 vs. NCBI nr
Match: XP_023536940.1 (prefoldin subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234.6 bits (597), Expect = 4.9e-58
Identity = 127/129 (98.45%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNL+ELLQQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMTVA 130
           RQIMSM+VA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of CmaCh12G009360 vs. NCBI nr
Match: KAG6586128.1 (Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57
Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGRAFVLEPKSVLMAEQEQK KDSEAAIVSLQSSKEYLEKQKAEVENNL+ELLQQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKFKDSEAAIVSLQSSKEYLEKQKAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMTVA 130
           RQIMSM+VA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of CmaCh12G009360 vs. NCBI nr
Match: XP_022937756.1 (prefoldin subunit 1-like [Cucurbita moschata])

HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57
Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGRAFVLEPKSVLMAEQEQK KDSEAAIVSLQSSKEYLEKQKAEVENNLKEL+QQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKFKDSEAAIVSLQSSKEYLEKQKAEVENNLKELVQQDPGIA 120

Query: 121 RQIMSMTVA 130
           RQIMSM+VA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of CmaCh12G009360 vs. NCBI nr
Match: XP_022929581.1 (prefoldin subunit 1-like [Cucurbita moschata])

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANRATFLEIQGRMIEITGKLKQVQ+Q+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGR FVLEPKSVLM EQEQKLKDSEAAI SL SSKEYLEKQ AEVENNL+ELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIGSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMTVA 130
           RQIMSM++A
Sbjct: 121 RQIMSMSLA 129

[Close]

BLAST of CmaCh12G009360 vs. TAIR 10
Match: AT2G07340.1 (PREFOLDIN 1 )

HSP 1 Score: 191.0 bits (484), Expect = 5.8e-49
Identity = 99/128 (77.34%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEA RA F+EIQ  MIE+TGKLKQVQ+Q+RNKEG++KRAFLTLEEL+ L ++TN YKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IGR FVLEPK+VL  EQEQKLKDSEAA+ SLQ+SKEYLEKQ AEVENNL+ELLQQ+PGIA
Sbjct: 61  IGRTFVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIA 120

Query: 121 RQIMSMTV 129
           +QIMSM++
Sbjct: 121 QQIMSMSM 128

[Close]

BLAST of CmaCh12G009360 vs. TAIR 10
Match: AT2G07340.2 (PREFOLDIN 1 )

HSP 1 Score: 185.3 bits (469), Expect = 3.2e-47
Identity = 98/128 (76.56%), Postives = 116/128 (90.62%), Query Frame = 0


Query: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADEA RA F+EIQ  MIE+TGKLKQVQ+Q+RNKEG++KRAFLTLEEL+ L ++TN YKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120
           IG+ FVLEPK+VL  EQEQKLKDSEAA+ SLQ+SKEYLEKQ AEVENNL+ELLQQ+PGIA
Sbjct: 61  IGK-FVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIA 120

Query: 121 RQIMSMTV 129
           +QIMSM++
Sbjct: 121 QQIMSMSM 127

The following BLAST results are available for this feature:

BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O60925	6.1e-11	34.58	Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2	[more]
Q3SZE2	1.4e-10	34.58	Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1	[more]
Q9CWM4	1.4e-10	34.58	Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1	[more]
Q5RAM7	1.4e-10	34.58	Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1	[more]
Q54JS0	9.7e-09	25.45	Probable prefoldin subunit 1 OS=Dictyostelium discoideum OX=44689 GN=pfdn1 PE=3 ...	[more]

BLAST of CmaCh12G009360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HND5	3.6e-59	100.00	prefoldin subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111465792 PE=3 SV=1	[more]
A0A6J1FB94	6.9e-58	97.67	prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444061 PE=3 SV=1	[more]
A0A6J1ENI7	7.9e-54	91.47	prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1	[more]
A0A6J1D9I1	3.9e-53	89.15	prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1	[more]
A0A0A0LJF7	1.3e-51	87.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1	[more]

BLAST of CmaCh12G009360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966081.1	7.5e-59	100.00	prefoldin subunit 1 [Cucurbita maxima]	[more]
XP_023536940.1	4.9e-58	98.45	prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6586128.1	1.4e-57	97.67	Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022937756.1	1.4e-57	97.67	prefoldin subunit 1-like [Cucurbita moschata]	[more]
XP_022929581.1	1.6e-53	91.47	prefoldin subunit 1-like [Cucurbita moschata]	[more]

BLAST of CmaCh12G009360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07340.1	5.8e-49	77.34	PREFOLDIN 1	[more]
AT2G07340.2	3.2e-47	76.56	PREFOLDIN 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 74..115
None	No IPR available	COILS	Coil	Coil	coord: 31..51
None	No IPR available	PANTHER	PTHR20903	PREFOLDIN SUBUNIT 1-RELATED	coord: 1..123
None	No IPR available	PANTHER	PTHR20903:SF0	PREFOLDIN SUBUNIT 1	coord: 1..123
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 10..114
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 13..115 e-value: 1.1E-18 score: 67.1
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 8..117 e-value: 7.2E-15 score: 56.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G009360.1	CmaCh12G009360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0051082	unfolded protein binding