CmaCh12G009360 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGTTACATCGGACCCTAAAAATTTTCAAACATTCATATTCGTAATTCGCAGAGTTGTAATCAAAGATCGTCTACTTGAATTCTGAATCTTCGCAATGGCGGACGAGGCGAACAGAGCTGTGAGTACTTTTTTCACTCTTCTCATCTTGTTTTTCCACTCGCCTCTGCCATTTTCCCGATGCATGAACTCTTGATTTTGTTTCTGGAATCAGACATTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGGTAATCTCCTTTCATTTTTCACTTAATTTTTTTGTACTTACTGTCTAGATTGTTCTTATTCATATTCGTGTTTAATTACTAAAGTAAACGAATGTTTCCTAGGTTAACTGATGAATCCAATCAATGTTCGTATTTCCAGTTCTGTCATTCTTCGATGTTTCGCTTTATTTGAATGGAGAGTTCTTGATTTATGAGTTCAAGCTGGTGTTCTTTCTCCTTGCTTTGCAGGTGCAAAGTCAGGTACGAAACAAGGAGGGAGAAAAGAAGCGTGCCTTTTTAACCTTGGAGGAACTTAAACAGTTGTCCGATGACACCAATGCGTACAAATCGATAGGTACTTGACAAATCTGTATTTTGTAACTGGAAATTTGTTCATTCTTTGCCTCAATCGTGATTACTTATCATTGATTTCTTTCCATCATTCTTTGTGGTGCAGGGAGAGCGTGAGTTATGCTACAATTGATCGATCCAGTTAAAGTTAGATTTTCATTTATCTCATAGTATATATATGAAATTCTCTTACTTTGTGTTGTCTCATCCTGACCAGGTTTGTTTTAGAGCCGAAATCGGTTCTAATGGCGGAACAGGAGCAAAAGCTCAAGGATAGTGAAGCTGCAATTGTATCACTGCAGGTTCATATTAGTATTACTTTCATCTGTAGAGACGAAATCTTCCTTTGAGCATTTTTCATTCACTAACTAACATTTTCTTGCTCTTCTATGTTCTATGTGTAATGACCCTAGATTTTTACTAACCTAAAGTCGCTACTATCATCATACTATACTCTCTTATACGGAAAATAAACCTTGAAAATATTGTCGTAAAACATTGCCATGGACTTGTAGGTTCGAAATCATCTTTAAAAGAACCTAAGGAAATACTAAATAAAACAAGTAAAACATTAAAAGTAACAACACCCTATACTAACCTAAAGTCTAAGAAATGAAATACCACTATCCTATGCACGTGTCATAGTCTCTACTAGCGATGCCCTCGTCAACTGTACAAGGGTACCTTGTCTTTACCTGAAATAGAAGTAGCACACGGCTTGAGTATTTTAAGAAATATTCAGTAAGTGGGGGTCAGGGAATGCAAACACATGCAATTCATGATTAGAGACCCATCGTTAAAATCATCATAGGGGTCGTTACACTATGTTTTCTCGAAATTTTAATTCTTGCATTAACACAGAATCCACACACACACAAAAGGGTATTTCTTATGAGGATCTGGGCATATTCAAACACTTCTTTGAACGAATTACGTTCTGTGAAGAGTTTGATGTCATTAATGCTATCCTCTTTCTTGCCAACTAGAACTTAGCTCAAGCATGCACAAAAAATTCTTGGCTTTCAATTCTTTCTTGCCAATTTGAACTTAGCTCAATCTGGGAAGGCATATACACGCACAATATTCTTGACATCTAATTGAAAGCGAACTTACTTTTCTGTTTTGGCATCTAATTGAAAGCGAACGAATCACGTTATTTGACTGGTAGAGGTGTCGTTACCAAGAGATTTGGAGAGTAGGCTGAACTTTTGTGATTTACACTATTTGGCAATGTTCTTATTTAATCTTTGATAAATGGCATTTGGGTATTTTTTTTTGATTATGGGTTCATGGAAGATGGTTTTTTTGCACATTTGCAGAGCTCAAAGGAGTATCTAGAGAAGCAAAAGGCGGAGGTGGAGAACAACTTGAAGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGACTGTAGCATAAGACATGCTCTCCTCTCTCCATTTGAATCTGAAATTAGCTGATCTTGTTCACAAGAATTTTAGTTTGTTGGTTGCTGTGTTATTCTGATGCCTAAACTCTGTTTCATATGCATTACATACTCCTTAAGTTCCCAGTTCTGTCAAGGGATACGTTCGAAATTTCTTAATTAGATAATGGATAGAATGCCCAAAAATGATTCTCCATTCTCTCTCTCTTTT CAGTTACATCGGACCCTAAAAATTTTCAAACATTCATATTCGTAATTCGCAGAGTTGTAATCAAAGATCGTCTACTTGAATTCTGAATCTTCGCAATGGCGGACGAGGCGAACAGAGCTACATTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGGTGCAAAGTCAGGTACGAAACAAGGAGGGAGAAAAGAAGCGTGCCTTTTTAACCTTGGAGGAACTTAAACAGTTGTCCGATGACACCAATGCGTACAAATCGATAGGGAGAGCGTTTGTTTTAGAGCCGAAATCGGTTCTAATGGCGGAACAGGAGCAAAAGCTCAAGGATAGTGAAGCTGCAATTGTATCACTGCAGAGCTCAAAGGAGTATCTAGAGAAGCAAAAGGCGGAGGTGGAGAACAACTTGAAGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGACTGTAGCATAAGACATGCTCTCCTCTCTCCATTTGAATCTGAAATTAGCTGATCTTGTTCACAAGAATTTTAGTTTGTTGGTTGCTGTGTTATTCTGATGCCTAAACTCTGTTTCATATGCATTACATACTCCTTAAGTTCCCAGTTCTGTCAAGGGATACGTTCGAAATTTCTTAATTAGATAATGGATAGAATGCCCAAAAATGATTCTCCATTCTCTCTCTCTTTT ATGGCGGACGAGGCGAACAGAGCTACATTTTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGGTGCAAAGTCAGGTACGAAACAAGGAGGGAGAAAAGAAGCGTGCCTTTTTAACCTTGGAGGAACTTAAACAGTTGTCCGATGACACCAATGCGTACAAATCGATAGGGAGAGCGTTTGTTTTAGAGCCGAAATCGGTTCTAATGGCGGAACAGGAGCAAAAGCTCAAGGATAGTGAAGCTGCAATTGTATCACTGCAGAGCTCAAAGGAGTATCTAGAGAAGCAAAAGGCGGAGGTGGAGAACAACTTGAAGGAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGACTGTAGCATAA MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIARQIMSMTVA Homology
BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot
Match: O60925 (Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2) HSP 1 Score: 68.6 bits (166), Expect = 6.1e-11 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 0
BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot
Match: Q3SZE2 (Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10 Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 0
BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot
Match: Q9CWM4 (Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10 Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 0
BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot
Match: Q5RAM7 (Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10 Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 0
BLAST of CmaCh12G009360 vs. ExPASy Swiss-Prot
Match: Q54JS0 (Probable prefoldin subunit 1 OS=Dictyostelium discoideum OX=44689 GN=pfdn1 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.7e-09 Identity = 28/110 (25.45%), Postives = 66/110 (60.00%), Query Frame = 0
BLAST of CmaCh12G009360 vs. ExPASy TrEMBL
Match: A0A6J1HND5 (prefoldin subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111465792 PE=3 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 3.6e-59 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CmaCh12G009360 vs. ExPASy TrEMBL
Match: A0A6J1FB94 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444061 PE=3 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 6.9e-58 Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of CmaCh12G009360 vs. ExPASy TrEMBL
Match: A0A6J1ENI7 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 7.9e-54 Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of CmaCh12G009360 vs. ExPASy TrEMBL
Match: A0A6J1D9I1 (prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 3.9e-53 Identity = 115/129 (89.15%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of CmaCh12G009360 vs. ExPASy TrEMBL
Match: A0A0A0LJF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51 Identity = 113/129 (87.60%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of CmaCh12G009360 vs. NCBI nr
Match: XP_022966081.1 (prefoldin subunit 1 [Cucurbita maxima]) HSP 1 Score: 237.3 bits (604), Expect = 7.5e-59 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CmaCh12G009360 vs. NCBI nr
Match: XP_023536940.1 (prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 234.6 bits (597), Expect = 4.9e-58 Identity = 127/129 (98.45%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CmaCh12G009360 vs. NCBI nr
Match: KAG6586128.1 (Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of CmaCh12G009360 vs. NCBI nr
Match: XP_022937756.1 (prefoldin subunit 1-like [Cucurbita moschata]) HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57 Identity = 126/129 (97.67%), Postives = 128/129 (99.22%), Query Frame = 0
BLAST of CmaCh12G009360 vs. NCBI nr
Match: XP_022929581.1 (prefoldin subunit 1-like [Cucurbita moschata]) HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53 Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of CmaCh12G009360 vs. TAIR 10
Match: AT2G07340.1 (PREFOLDIN 1 ) HSP 1 Score: 191.0 bits (484), Expect = 5.8e-49 Identity = 99/128 (77.34%), Postives = 116/128 (90.62%), Query Frame = 0
BLAST of CmaCh12G009360 vs. TAIR 10
Match: AT2G07340.2 (PREFOLDIN 1 ) HSP 1 Score: 185.3 bits (469), Expect = 3.2e-47 Identity = 98/128 (76.56%), Postives = 116/128 (90.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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