CmaCh12G009220 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCACAGGCATCCCAGGTAATTCAGTCTTATGGTTCTTCATTATCTGCATATGGCCTGATTTTTCTAGGGGCTCATTTTGCATGGGCTTTTAGTTTAATGTTTCTATTCAGCAGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCATTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGAAGGAGTAACTCATTACCTTCTGGGTGGAATTGCCACAACATAG ATGGGCACAGGCATCCCAGGGGCTCATTTTGCATGGGCTTTTAGTTTAATGTTTCTATTCAGCAGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCATTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGAAGGAGTAACTCATTACCTTCTGGGTGGAATTGCCACAACATAG ATGGGCACAGGCATCCCAGGGGCTCATTTTGCATGGGCTTTTAGTTTAATGTTTCTATTCAGCAGGCGTGGTTATTGGCAAGAACTTATTGAATCCATCATTTGGGCTCATAATAAATTAAAAGTTGCTCCTGCTACTCAGCCTAGAGCCTTGAGCATTGTCCAAGGACGTGCTGAAGGAGTAACTCATTACCTTCTGGGTGGAATTGCCACAACATAG MGTGIPGAHFAWAFSLMFLFSRRGYWQELIESIIWAHNKLKVAPATQPRALSIVQGRAEGVTHYLLGGIATT Homology
BLAST of CmaCh12G009220 vs. ExPASy Swiss-Prot
Match: Q3V534 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Acorus calamus OX=4465 GN=psaA PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.3e-30 Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CmaCh12G009220 vs. ExPASy Swiss-Prot
Match: A4QJB5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Aethionema cordifolium OX=434059 GN=psaA PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.3e-30 Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CmaCh12G009220 vs. ExPASy Swiss-Prot
Match: A4QJJ9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Aethionema grandiflorum OX=72657 GN=psaA PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.3e-30 Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CmaCh12G009220 vs. ExPASy Swiss-Prot
Match: Q70Y03 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Amborella trichopoda OX=13333 GN=psaA PE=2 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.3e-30 Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CmaCh12G009220 vs. ExPASy Swiss-Prot
Match: A4QK18 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Arabis hirsuta OX=78191 GN=psaA PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 4.3e-30 Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CmaCh12G009220 vs. ExPASy TrEMBL
Match: A0A4Y7JYS7 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Papaver somniferum OX=3469 GN=C5167_008618 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 8.3e-29 Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of CmaCh12G009220 vs. ExPASy TrEMBL
Match: K9ZW81 (Photosystem I P700 apoprotein A1 (Fragment) OS=Balanites maughamii OX=66625 GN=psaA PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 7.1e-28 Identity = 63/71 (88.73%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of CmaCh12G009220 vs. ExPASy TrEMBL
Match: A0A1Z1GAA4 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Mangifera indica OX=29780 GN=psaA PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27 Identity = 63/66 (95.45%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CmaCh12G009220 vs. ExPASy TrEMBL
Match: A0A2S0DU88 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Dioscorea polystachya OX=55575 GN=psaA PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27 Identity = 63/66 (95.45%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CmaCh12G009220 vs. ExPASy TrEMBL
Match: A0A6G7IWP5 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Aesculus chinensis OX=290911 GN=psaA PE=3 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27 Identity = 63/66 (95.45%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CmaCh12G009220 vs. NCBI nr
Match: MQL94995.1 (hypothetical protein [Colocasia esculenta]) HSP 1 Score: 141.0 bits (354), Expect = 4.1e-30 Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 0
BLAST of CmaCh12G009220 vs. NCBI nr
Match: RZC64928.1 (hypothetical protein C5167_008618 [Papaver somniferum]) HSP 1 Score: 135.6 bits (340), Expect = 1.7e-28 Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 0
BLAST of CmaCh12G009220 vs. NCBI nr
Match: KAF5774549.1 (putative photosystem I PsaA/PsaB [Helianthus annuus]) HSP 1 Score: 133.3 bits (334), Expect = 8.6e-28 Identity = 68/89 (76.40%), Postives = 69/89 (77.53%), Query Frame = 0
BLAST of CmaCh12G009220 vs. NCBI nr
Match: KAF3613787.1 (Photosystem I chlorophyll a apoprotein A1 [Capsicum annuum]) HSP 1 Score: 132.5 bits (332), Expect = 1.5e-27 Identity = 62/66 (93.94%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CmaCh12G009220 vs. NCBI nr
Match: AFZ63891.1 (photosystem I P700 apoprotein A1, partial [Balanites maughamii]) HSP 1 Score: 132.5 bits (332), Expect = 1.5e-27 Identity = 63/71 (88.73%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of CmaCh12G009220 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 131.0 bits (328), Expect = 4.0e-31 Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of CmaCh12G009220 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 65.9 bits (159), Expect = 1.6e-11 Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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