Homology
BLAST of CmaCh12G009200 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 142.9 bits (359), Expect = 6.7e-33
Identity = 101/334 (30.24%), Postives = 163/334 (48.80%), Query Frame = 0
Query: 1 MPGRFWGEVVMTAVYLLNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVAY-------- 60
+P FWGE V TA YL+NRSP+ L + W NK+ + H +VFGC A+
Sbjct: 605 LPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQR 664
Query: 61 --MKGGELTCLPTSSSTKALS-KQWNDV-------IEADHNPNKFMVKYLITESEEGGAQ 120
+ + C+ + + W+ V + ++ ++E + G
Sbjct: 665 TKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGII 724
Query: 121 HQQPSPPPAGATPEPVEFTTPRTA-----------------DSTLDADHDTDLEARYRRM 180
+ P P E TT + + + +H T E +++ +
Sbjct: 725 PNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQPL 784
Query: 181 DDLVGGGEPPGLAAHKLKEMAELHAISAD-EPNTFVEV----EKNPCWLKAMQEEMTSIT 240
E P + + + E IS D EP + EV EKN +KAMQEEM S+
Sbjct: 785 ----RRSERPRVESRRYPS-TEYVLISDDREPESLKEVLSHPEKNQL-MKAMQEEMESLQ 844
Query: 241 ENQTWSLEDIPPGHQAIGLKWVFKLKRKEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPV 295
+N T+ L ++P G + + KWVFKLK+ ++V++KARLV KG+ QK+G+DF+E+F+PV
Sbjct: 845 KNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPV 904
BLAST of CmaCh12G009200 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 133.7 bits (335), Expect = 4.1e-30
Identity = 109/405 (26.91%), Postives = 166/405 (40.99%), Query Frame = 0
Query: 5 FWGEVVMTAVYLLNRSPTRSL--DGKTSYEAWYNKKPAVHHFRVFGCVAYMKGGELTCLP 64
FWGE V+TA YL+NR P+R+L KT YE W+NKKP + H RVFG Y+
Sbjct: 609 FWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGATVYVHIKNKQGKF 668
Query: 65 TSSSTKAL--------SKQWND-----------VIEADHNPNKFMVKY---LITESEEGG 124
S K++ K W+ V++ + N VK+ + +S+E
Sbjct: 669 DDKSFKSIFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVNSRAVKFETVFLKDSKESE 728
Query: 125 AQH--------QQPSPPPAGATPEPVEFTTPRTADSTLDADHDTDL-------------- 184
++ Q P + ++F + +D+
Sbjct: 729 NKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSRKIIQTEFPNESKECD 788
Query: 185 -----------------EARYRRMDDLV----GGGEP----PGLAAHKLKEMA------- 244
E++ R+ DD + G G P A LKE+
Sbjct: 789 NIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKN 848
Query: 245 ---------------------------------ELHAISADEPNTFVEV---EKNPCWLK 296
H I D PN+F E+ + W +
Sbjct: 849 DGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEE 908
BLAST of CmaCh12G009200 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 2.9e-20
Identity = 72/249 (28.92%), Postives = 108/249 (43.37%), Query Frame = 0
Query: 55 GGELTCLPTSSSTKALSKQWNDVIEADHNPNKFMVKYLITESEEGGAQHQQPSPPP---- 114
G + T PT + T+ S Q + +NP L +S AQ SP P
Sbjct: 838 GPQPTTQPTQTQTQTHSSQ----NTSQNNPTNESPSQL-AQSLSTPAQSSSSSPSPTTSA 897
Query: 115 ----AGATPEPVEFTTPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAAHKLKEMA 174
TP + P ++ ++ L +G G+ K
Sbjct: 898 SSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTH------SMGTRAKAGIIKPNPKYSL 957
Query: 175 ELHAISADEPNTFVEVEKNPCWLKAMQEEMTSITENQTWSLEDIPPGHQAI-GLKWVFKL 234
+ + EP T ++ K+ W AM E+ + N TW L PP H I G +W+F
Sbjct: 958 AVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTK 1017
Query: 235 KRKEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAITAHYSWEVHHMDV 294
K G + ++KARLVAKGY Q+ G+D+ E F+PV + S+R +L + SW + +DV
Sbjct: 1018 KYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1075
BLAST of CmaCh12G009200 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 1.5e-19
Identity = 47/121 (38.84%), Postives = 70/121 (57.85%), Query Frame = 0
Query: 175 EPNTFVEVEKNPCWLKAMQEEMTSITENQTWSL-EDIPPGHQAIGLKWVFKLKRKEKGEV 234
EP T ++ K+ W +AM E+ + N TW L PP +G +W+F K G +
Sbjct: 938 EPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSL 997
Query: 235 VKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAITAHYSWEVHHMDVKSAFLNGE 294
++KARLVAKGY Q+ G+D+ E F+PV + S+R +L + SW + +DV +AFL G
Sbjct: 998 NRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGT 1057
BLAST of CmaCh12G009200 vs. ExPASy Swiss-Prot
Match:
P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)
HSP 1 Score: 85.9 bits (211), Expect = 9.8e-16
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 0
Query: 175 EPNTFVEVEKNPCWLKAMQEEMTSITENQTWSLEDIPPGHQAIGLKWVFKLKRKEKGEVV 234
EP + + K+P W +AMQEE+ +++ N+TW L P +G KWVFK K G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 235 KHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAI 273
+ KARLVAKG+ Q++G+ F E ++PV R ++R +L +
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124
BLAST of CmaCh12G009200 vs. ExPASy TrEMBL
Match:
Q7XPB1 (OSJNBb0026E15.10 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0026E15.10 PE=4 SV=2)
HSP 1 Score: 304.7 bits (779), Expect = 4.9e-79
Identity = 166/344 (48.26%), Postives = 211/344 (61.34%), Query Frame = 0
Query: 1 MPGRFWGEVVMTAVYLLNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVAYMK------ 60
+PGRFWGE + TAV+LLNRSPT+SLD +T YEAWY + PAVH R FGCV ++K
Sbjct: 711 VPGRFWGEAMSTAVFLLNRSPTKSLDNQTPYEAWYGQWPAVHFLRTFGCVGHVKITKPGL 770
Query: 61 ------GGELTCLPTSSSTKA----------------------LSKQWNDVI-EADHNPN 120
+ L +KA ++ W V +
Sbjct: 771 KKLDDRSAPMVLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDIAWDWGPVTPDGAPQLE 830
Query: 121 KFMVKYLITESEEGGAQHQQPSP---------------PPAGATPEPVEFTTPRTADSTL 180
F V+ ++T + G A P+P PP+ +PE VEF TP T DS L
Sbjct: 831 PFTVEQVVT-TTIGTAPASSPTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPPTQDSIL 890
Query: 181 DADHDTDLEARYRRMDDLVGGGEPPGLAAHKLKEMAELHAISADEPNTFVEVEKNPCWLK 240
DAD D D+ RYR +D+L+G PPG A L+++ ELH +SADEP + E E +P W
Sbjct: 891 DADADDDVVPRYRLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEADPSWRG 950
Query: 241 AMQEEMTSITENQTWSLEDIPPGHQAIGLKWVFKLKRKEKGEVVKHKARLVAKGYVQKQG 295
AMQ+E+ +I +N TWSL D+P GH+AIGLKWV+KLKR E+G +V++KARLVAKGYVQ+QG
Sbjct: 951 AMQDELNAIVDNDTWSLTDLPHGHRAIGLKWVYKLKRDEQGAIVRYKARLVAKGYVQRQG 1010
BLAST of CmaCh12G009200 vs. ExPASy TrEMBL
Match:
Q2QSF4 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g24300 PE=4 SV=1)
HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74
Identity = 163/340 (47.94%), Postives = 210/340 (61.76%), Query Frame = 0
Query: 1 MPGRFWGEVVMTAVYLLNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVAYM------- 60
MPG FWGE V TAV+LLNRSPT+ L KT Y AWY ++PAVH R FGC+ ++
Sbjct: 81 MPGLFWGEAVSTAVFLLNRSPTKFLANKTPYRAWYGERPAVHFLRTFGCIGHVNNDKPGL 140
Query: 61 -----KGGELTCLPTSSSTKALSKQWNDVIEADHNPNKFMVKYLITESEE------GGAQ 120
+ + L +KA + ++ V D P F V++ ++ ++E
Sbjct: 141 KKLDDRSAPIVLLGYEQGSKAY-RLYDPV--GDREP--FTVEHAVSTTKEEVVTPASSPP 200
Query: 121 HQQPSPPPAGATPE--------PVEFTTPRTADSTLDADHDTD-LEARYRRMDDLVGGGE 180
Q P P TPE VE +P + DS LD D D + E RYR +D+++G
Sbjct: 201 RSQSPPTPVSPTPEQGMQATEAEVEHASPPSHDSILDTDADPEKREPRYRTLDNILGPAS 260
Query: 181 PPGLAAHKLKEMAELHAISADEPNTFVEVEK--NPCWLKAMQEEMTSITENQTWSLEDIP 240
P G+A +L E ELHA+SA+EP++ E E +P W AM++EM SI EN TWSL D+P
Sbjct: 261 PSGMAT-RLLEQLELHAVSAEEPSSLAEAEAEVDPNWKGAMEDEMKSIEENNTWSLTDLP 320
Query: 241 PGHQAIGLKWVFKLKRKEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLA 300
GH+AIGLKWV+KLKR E+G VV HKARLVAKGYVQ+QGVDF+EVF PVARLESV LLA
Sbjct: 321 AGHRAIGLKWVYKLKRDEQGAVVCHKARLVAKGYVQRQGVDFDEVFTPVARLESVHLLLA 380
Query: 301 ITAHYSWEVHHMDVKSAFLNGELRRPSISDNHLASWTTTT 312
+ AH +WEVHHMDVKSAFLN EL+ + L +W+ T
Sbjct: 381 VAAHQAWEVHHMDVKSAFLNSELQ-----EMQLRTWSLHT 409
BLAST of CmaCh12G009200 vs. ExPASy TrEMBL
Match:
A0A7I8IFL9 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_02003168 PE=4 SV=1)
HSP 1 Score: 287.3 bits (734), Expect = 8.2e-74
Identity = 160/344 (46.51%), Postives = 214/344 (62.21%), Query Frame = 0
Query: 1 MPGRFWGEVVMTAVYLLNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVAYM------- 60
+PG FWGE V TAVY+LNR PT+S+DG T +E W+ KKPAVHH +VFGC+AY+
Sbjct: 134 LPGWFWGEAVATAVYILNRCPTKSVDGMTPFEVWHGKKPAVHHLKVFGCIAYVLNTTPHL 193
Query: 61 -----KGGELTCLPTSSSTKALSKQ---------WNDVI------EADHNPNKFMVKYLI 120
+G ++ + +KA DV+ +A + + F ++Y +
Sbjct: 194 KKLEDRGRKMIFIGYEYGSKAYRAYDPTARRVHVTRDVVFDENARDAGSHDDMFTLEYAV 253
Query: 121 -----------TESEEGGAQHQQPSPPPA-----GATP-----EPVEFTTPRTAD-STLD 180
E + A +P PP+ GA P E VEF +P + LD
Sbjct: 254 GNQVPPELDGAIEVLDDDAPGPEPMSPPSVHYSGGAAPIEDGGEEVEFASPPSVHIDHLD 313
Query: 181 ADHDTDLEARYRRMDDLVGGGEPPGLAAHKLKEMAELHAISADEPNTFVEVEKNPCWLKA 240
A+HD D R+R++D++VG P GLA+ L ELHA+S+DEP +FVE E +P W KA
Sbjct: 314 ANHD-DAPLRFRKIDNIVGLASPRGLASRAL-IAKELHAVSSDEPVSFVEAEGHPSWRKA 373
Query: 241 MQEEMTSITENQTWSLEDIPPGHQAIGLKWVFKLKRKEKGEVVKHKARLVAKGYVQKQGV 296
M+EEM SI EN+TWSL D+P G +AIGLKWV+K+KR E G V K+KARLV KGY Q+QG+
Sbjct: 374 MEEEMASIEENRTWSLVDLPHGRRAIGLKWVYKVKRDENGAVAKYKARLVVKGYAQRQGI 433
BLAST of CmaCh12G009200 vs. ExPASy TrEMBL
Match:
A0A3L6TJD2 (Integrase catalytic domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G10330 PE=4 SV=1)
HSP 1 Score: 276.9 bits (707), Expect = 1.1e-70
Identity = 171/369 (46.34%), Postives = 209/369 (56.64%), Query Frame = 0
Query: 1 MPGRFWGEVVMTAVYLLNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVA-------YM 60
+PG FWGE V TAV++LNRSPTRSLDGKT YEA + +PAV R FGC+A Y+
Sbjct: 166 LPGTFWGEAVTTAVFILNRSPTRSLDGKTPYEA-HGDRPAVSFLRTFGCIAHVRNTKPYL 225
Query: 61 KGGELTCLPT-----SSSTKALS--------------------KQWNDVIEA---DHNPN 120
K E P + +KA QW+ EA D N
Sbjct: 226 KKLEDRSTPMIFVGYEAGSKAYRVYNPVDGRVLVTRDVVFDEVAQWDWGAEAGGEDSGGN 285
Query: 121 -KFMVKY-LITESEEGG---------------------------------AQHQQPSPPP 180
+F V + ES GG H PSP P
Sbjct: 286 GEFTVVFPANVESVVGGEPAGRSPAAMNSPPSATTRSTDAVPTTPSSPMVTAHTPPSPAP 345
Query: 181 ----AGATPEPVEFTT-PRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAAHKLKEM 240
+PEP+EF T P LDADHD D+ R+RR+D+L+G G PGLA ++
Sbjct: 346 TLNVTHVSPEPIEFATPPSNFHDDLDADHDDDVPVRFRRLDELLGPGTLPGLAP-RVSGD 405
Query: 241 AELHAISADEPNTFVEVEKNPCWLKAMQEEMTSITENQTWSLEDIPPGHQAIGLKWVFKL 295
EL +A+EP +F E EK+ CW +AM+EEM SI EN+TWSL ++P GH+ IGLKWVFK+
Sbjct: 406 GELLFTTAEEPTSFKEAEKHQCWQRAMEEEMKSIEENKTWSLIELPAGHKPIGLKWVFKV 465
BLAST of CmaCh12G009200 vs. ExPASy TrEMBL
Match:
A0A7I8IJM7 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_04004410 PE=4 SV=1)
HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 159/354 (44.92%), Postives = 214/354 (60.45%), Query Frame = 0
Query: 1 MPGRFWGEVVMTAVYLLNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVAYM------- 60
+PG FWGE V TAVY+LNR PT+S+DG T +E W+ KKPAVHH +VFGC+AY+
Sbjct: 155 LPGWFWGEAVATAVYILNRCPTKSVDGMTPFEVWHGKKPAVHHLKVFGCIAYVLNTTPHL 214
Query: 61 -----KGGELTCLPTSSSTKAL--------------------SKQWN-----DVIEADHN 120
+G ++ + +KA + QW+ + +A +
Sbjct: 215 KKLEDRGRKMIFIGYEYGSKAYRAYDPTARRVHVTRDVVFDENAQWDWGSGAEQGDAGSH 274
Query: 121 PNKFMVKYLI-----------TESEEGGAQHQQPSPPPA-----GATP-----EPVEFTT 180
+ F ++Y + E + A +P PP+ GA P E VEF +
Sbjct: 275 DDMFTLEYAVGNQVPPELDGAIEVLDDDAPGPEPMSPPSVHYSGGAAPIEDGGEEVEFAS 334
Query: 181 PRTAD-STLDADHDTDLEARYRRMDDLVGGGEPPGLAAHKLKEMAELHAISADEPNTFVE 240
P + LDA+HD D R+R++D++VG P GLA+ L ELHA+S+DEP +FVE
Sbjct: 335 PPSVHIDHLDANHD-DAPLRFRKIDNIVGLASPRGLASRAL-IAKELHAVSSDEPVSFVE 394
Query: 241 VEKNPCWLKAMQEEMTSITENQTWSLEDIPPGHQAIGLKWVFKLKRKEKGEVVKHKARLV 296
E +P W KAM+EEM SI EN+T SL D+P G +AIGLKWV+K+KR E VVK+KARLV
Sbjct: 395 AEGHPSWRKAMEEEMASIEENRTGSLVDLPHGRRAIGLKWVYKVKRDENRAVVKYKARLV 454
BLAST of CmaCh12G009200 vs. NCBI nr
Match:
XP_023522344.1 (uncharacterized protein LOC111786267, partial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 365.5 bits (937), Expect = 4.9e-97
Identity = 210/359 (58.50%), Postives = 226/359 (62.95%), Query Frame = 0
Query: 1 MPGRFWGEVVMTAVYLLNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVAYMKGGELTC 60
MPGRFWGE VMTAVYLLNRSPTRSLDGKT YEAW + V VF
Sbjct: 1 MPGRFWGEAVMTAVYLLNRSPTRSLDGKTPYEAW--GRAHVSRDVVF------------- 60
Query: 61 LPTSSSTKALSKQWNDVIEADHNPNKFMVKYLITESEEGGAQHQQPSPPPAGATPEPVEF 120
++ QWNDVIEADHNPN+F V+YL+TE EE GAQHQ+PSPPPAGA PEPVEF
Sbjct: 61 ------DESTFWQWNDVIEADHNPNQFTVEYLVTEPEE-GAQHQEPSPPPAGAPPEPVEF 120
Query: 121 TTPRTADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAAHKLKEMAELHAISADEPNTFV 180
TPRTA+STLDADHDT LEARYRR+DDLVGGGEPPGLAA +LKE+AELHAISADEPNTF
Sbjct: 121 ATPRTANSTLDADHDTYLEARYRRIDDLVGGGEPPGLAARELKEVAELHAISADEPNTFA 180
Query: 181 EVEKNPCWLKAMQEEMTSITENQTWSLEDIPPGHQAIGLKWVFKLKRKEKGEVVKHKARL 240
E EKNPCW LKR +K EVVK+KARL
Sbjct: 181 EAEKNPCW------------------------------------LKRNKKREVVKYKARL 240
Query: 241 VAKGYVQKQGVDFEEVFAPVARLESVRFLLAITAHYSWEVHHMDVKSAFLNGEL------ 300
V KGYVQK GVDFEEVFAPV RLESVRFLL+I AHYSWEVHHMDVKSAFLN EL
Sbjct: 241 VVKGYVQKLGVDFEEVFAPVVRLESVRFLLSIAAHYSWEVHHMDVKSAFLNEELKETVYV 300
Query: 301 RRP----------------------------------------SISDNHLASWTTTTPI 314
R+P S+SDNHLASWTTTT I
Sbjct: 301 RQPPGFLDNDNQNKVLRLHKALYGLRQAPLAWNAKLDSTLLSXSMSDNHLASWTTTTRI 301
BLAST of CmaCh12G009200 vs. NCBI nr
Match:
CAE03692.2 (OSJNBb0026E15.10 [Oryza sativa Japonica Group])
HSP 1 Score: 304.7 bits (779), Expect = 1.0e-78
Identity = 166/344 (48.26%), Postives = 211/344 (61.34%), Query Frame = 0
Query: 1 MPGRFWGEVVMTAVYLLNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVAYMK------ 60
+PGRFWGE + TAV+LLNRSPT+SLD +T YEAWY + PAVH R FGCV ++K
Sbjct: 711 VPGRFWGEAMSTAVFLLNRSPTKSLDNQTPYEAWYGQWPAVHFLRTFGCVGHVKITKPGL 770
Query: 61 ------GGELTCLPTSSSTKA----------------------LSKQWNDVI-EADHNPN 120
+ L +KA ++ W V +
Sbjct: 771 KKLDDRSAPMVLLGYEQGSKAYRLYDPVSERVHVSRDVVFDEDIAWDWGPVTPDGAPQLE 830
Query: 121 KFMVKYLITESEEGGAQHQQPSP---------------PPAGATPEPVEFTTPRTADSTL 180
F V+ ++T + G A P+P PP+ +PE VEF TP T DS L
Sbjct: 831 PFTVEQVVT-TTIGTAPASSPTPPSPPSPAPSAPTTPAPPSPPSPEAVEFVTPPTQDSIL 890
Query: 181 DADHDTDLEARYRRMDDLVGGGEPPGLAAHKLKEMAELHAISADEPNTFVEVEKNPCWLK 240
DAD D D+ RYR +D+L+G PPG A L+++ ELH +SADEP + E E +P W
Sbjct: 891 DADADDDVVPRYRLVDNLLGNASPPGHAPRVLEQL-ELHVVSADEPASLAEAEADPSWRG 950
Query: 241 AMQEEMTSITENQTWSLEDIPPGHQAIGLKWVFKLKRKEKGEVVKHKARLVAKGYVQKQG 295
AMQ+E+ +I +N TWSL D+P GH+AIGLKWV+KLKR E+G +V++KARLVAKGYVQ+QG
Sbjct: 951 AMQDELNAIVDNDTWSLTDLPHGHRAIGLKWVYKLKRDEQGAIVRYKARLVAKGYVQRQG 1010
BLAST of CmaCh12G009200 vs. NCBI nr
Match:
XP_023521510.1 (uncharacterized protein LOC111785335 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 298.9 bits (764), Expect = 5.6e-77
Identity = 185/395 (46.84%), Postives = 211/395 (53.42%), Query Frame = 0
Query: 17 LNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVAYMK------------GGELTCLPTS 76
+NRSPTR L GKTSYEAWYNKK AVHHFRVF C+AYMK G ++ +
Sbjct: 41 VNRSPTRRLYGKTSYEAWYNKKLAVHHFRVFDCIAYMKVVHPHLAKLDPRGLKVVFIGYE 100
Query: 77 SSTKALSKQWNDVIEADHNPNKFMVKYLITESEEGGAQHQQPSPPPAGATPEPVEFTTPR 136
+K NDVIE D NPN+F V+YLITE EGGAQH++ SP A TP+PVEF TPR
Sbjct: 101 PRSK------NDVIEVDQNPNQFTVEYLITEPREGGAQHRELSPTSAAVTPKPVEFATPR 160
Query: 137 TADSTLDADHDTDLEARYRRMDDLVGGGEPPGLAAHKLKEMAELHAISADEPNTFVEVEK 196
TADSTLD DHD DL ARYRRMDDLVGGGEPPGLA +L+E+ ELHAIS DEPNTF + E+
Sbjct: 161 TADSTLDVDHDDDLVARYRRMDDLVGGGEPPGLATRELEEVTELHAISTDEPNTFAKAER 220
Query: 197 NPCWLKAMQEEMTS-------------------------------------ITENQTWS- 256
NPC LK ++ S ITE +
Sbjct: 221 NPCCLKVHHMDVKSAFLNGELKETIDVQQPPGFLDNDNPGKNPNQFTVEYLITEPREGGA 280
Query: 257 -------------------------------------------LEDI-----PPGHQAIG 296
++D+ PPG
Sbjct: 281 QHRELSPTSAAVTPKPVEFATPRTADSTLDVDHDDDLVARYRRMDDLVGGGEPPGLATRE 340
BLAST of CmaCh12G009200 vs. NCBI nr
Match:
ABA97666.1 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group])
HSP 1 Score: 288.9 bits (738), Expect = 5.8e-74
Identity = 163/340 (47.94%), Postives = 210/340 (61.76%), Query Frame = 0
Query: 1 MPGRFWGEVVMTAVYLLNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVAYM------- 60
MPG FWGE V TAV+LLNRSPT+ L KT Y AWY ++PAVH R FGC+ ++
Sbjct: 81 MPGLFWGEAVSTAVFLLNRSPTKFLANKTPYRAWYGERPAVHFLRTFGCIGHVNNDKPGL 140
Query: 61 -----KGGELTCLPTSSSTKALSKQWNDVIEADHNPNKFMVKYLITESEE------GGAQ 120
+ + L +KA + ++ V D P F V++ ++ ++E
Sbjct: 141 KKLDDRSAPIVLLGYEQGSKAY-RLYDPV--GDREP--FTVEHAVSTTKEEVVTPASSPP 200
Query: 121 HQQPSPPPAGATPE--------PVEFTTPRTADSTLDADHDTD-LEARYRRMDDLVGGGE 180
Q P P TPE VE +P + DS LD D D + E RYR +D+++G
Sbjct: 201 RSQSPPTPVSPTPEQGMQATEAEVEHASPPSHDSILDTDADPEKREPRYRTLDNILGPAS 260
Query: 181 PPGLAAHKLKEMAELHAISADEPNTFVEVEK--NPCWLKAMQEEMTSITENQTWSLEDIP 240
P G+A +L E ELHA+SA+EP++ E E +P W AM++EM SI EN TWSL D+P
Sbjct: 261 PSGMAT-RLLEQLELHAVSAEEPSSLAEAEAEVDPNWKGAMEDEMKSIEENNTWSLTDLP 320
Query: 241 PGHQAIGLKWVFKLKRKEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLA 300
GH+AIGLKWV+KLKR E+G VV HKARLVAKGYVQ+QGVDF+EVF PVARLESV LLA
Sbjct: 321 AGHRAIGLKWVYKLKRDEQGAVVCHKARLVAKGYVQRQGVDFDEVFTPVARLESVHLLLA 380
Query: 301 ITAHYSWEVHHMDVKSAFLNGELRRPSISDNHLASWTTTT 312
+ AH +WEVHHMDVKSAFLN EL+ + L +W+ T
Sbjct: 381 VAAHQAWEVHHMDVKSAFLNSELQ-----EMQLRTWSLHT 409
BLAST of CmaCh12G009200 vs. NCBI nr
Match:
CAA2616957.1 (unnamed protein product [Spirodela intermedia])
HSP 1 Score: 287.3 bits (734), Expect = 1.7e-73
Identity = 160/344 (46.51%), Postives = 214/344 (62.21%), Query Frame = 0
Query: 1 MPGRFWGEVVMTAVYLLNRSPTRSLDGKTSYEAWYNKKPAVHHFRVFGCVAYM------- 60
+PG FWGE V TAVY+LNR PT+S+DG T +E W+ KKPAVHH +VFGC+AY+
Sbjct: 134 LPGWFWGEAVATAVYILNRCPTKSVDGMTPFEVWHGKKPAVHHLKVFGCIAYVLNTTPHL 193
Query: 61 -----KGGELTCLPTSSSTKALSKQ---------WNDVI------EADHNPNKFMVKYLI 120
+G ++ + +KA DV+ +A + + F ++Y +
Sbjct: 194 KKLEDRGRKMIFIGYEYGSKAYRAYDPTARRVHVTRDVVFDENARDAGSHDDMFTLEYAV 253
Query: 121 -----------TESEEGGAQHQQPSPPPA-----GATP-----EPVEFTTPRTAD-STLD 180
E + A +P PP+ GA P E VEF +P + LD
Sbjct: 254 GNQVPPELDGAIEVLDDDAPGPEPMSPPSVHYSGGAAPIEDGGEEVEFASPPSVHIDHLD 313
Query: 181 ADHDTDLEARYRRMDDLVGGGEPPGLAAHKLKEMAELHAISADEPNTFVEVEKNPCWLKA 240
A+HD D R+R++D++VG P GLA+ L ELHA+S+DEP +FVE E +P W KA
Sbjct: 314 ANHD-DAPLRFRKIDNIVGLASPRGLASRAL-IAKELHAVSSDEPVSFVEAEGHPSWRKA 373
Query: 241 MQEEMTSITENQTWSLEDIPPGHQAIGLKWVFKLKRKEKGEVVKHKARLVAKGYVQKQGV 296
M+EEM SI EN+TWSL D+P G +AIGLKWV+K+KR E G V K+KARLV KGY Q+QG+
Sbjct: 374 MEEEMASIEENRTWSLVDLPHGRRAIGLKWVYKVKRDENGAVAKYKARLVVKGYAQRQGI 433
BLAST of CmaCh12G009200 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 122.9 bits (307), Expect = 5.1e-28
Identity = 54/122 (44.26%), Postives = 85/122 (69.67%), Query Frame = 0
Query: 173 ADEPNTFVEVEKNPCWLKAMQEEMTSITENQTWSLEDIPPGHQAIGLKWVFKLKRKEKGE 232
A EP+T+ E ++ W AM +E+ ++ TW + +PP + IG KWV+K+K G
Sbjct: 83 AKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGT 142
Query: 233 VVKHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAITAHYSWEVHHMDVKSAFLNG 292
+ ++KARLVAKGY Q++G+DF E F+PV +L SV+ +LAI+A Y++ +H +D+ +AFLNG
Sbjct: 143 IERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNG 202
Query: 293 EL 295
+L
Sbjct: 203 DL 204
BLAST of CmaCh12G009200 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 85.9 bits (211), Expect = 6.9e-17
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 0
Query: 175 EPNTFVEVEKNPCWLKAMQEEMTSITENQTWSLEDIPPGHQAIGLKWVFKLKRKEKGEVV 234
EP + + K+P W +AMQEE+ +++ N+TW L P +G KWVFK K G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 235 KHKARLVAKGYVQKQGVDFEEVFAPVARLESVRFLLAI 273
+ KARLVAKG+ Q++G+ F E ++PV R ++R +L +
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 6.7e-33 | 30.24 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 4.1e-30 | 26.91 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q94HW2 | 2.9e-20 | 28.92 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.5e-19 | 38.84 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P92520 | 9.8e-16 | 40.82 | Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
Q7XPB1 | 4.9e-79 | 48.26 | OSJNBb0026E15.10 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBb0026E... | [more] |
Q2QSF4 | 2.8e-74 | 47.94 | Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ... | [more] |
A0A7I8IFL9 | 8.2e-74 | 46.51 | Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_02003168 PE=4 SV... | [more] |
A0A3L6TJD2 | 1.1e-70 | 46.34 | Integrase catalytic domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2... | [more] |
A0A7I8IJM7 | 1.4e-70 | 44.92 | Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_04004410 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
XP_023522344.1 | 4.9e-97 | 58.50 | uncharacterized protein LOC111786267, partial [Cucurbita pepo subsp. pepo] | [more] |
CAE03692.2 | 1.0e-78 | 48.26 | OSJNBb0026E15.10 [Oryza sativa Japonica Group] | [more] |
XP_023521510.1 | 5.6e-77 | 46.84 | uncharacterized protein LOC111785335 [Cucurbita pepo subsp. pepo] | [more] |
ABA97666.1 | 5.8e-74 | 47.94 | retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] | [more] |
CAA2616957.1 | 1.7e-73 | 46.51 | unnamed protein product [Spirodela intermedia] | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 5.1e-28 | 44.26 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 6.9e-17 | 40.82 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |