CmaCh12G008370 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G008370
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	S-adenosylmethionine decarboxylase proenzyme
Location	Cma_Chr12: 6199915 .. 6201096 (+)
RNA-Seq Expression	CmaCh12G008370
Synteny	CmaCh12G008370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGTGTTCACCAAACTCCTAGAGGCATCTGCGGCTCCGCAACAATCTCCTTCTCCAATCGGTTTCGAAGGCTTCGAAAAACGCCTGGAAATCACATTCGCAAAACTGCCTATTTTTCAGGACTCTGAAGGACTTGGTCTCCGAGCTTTGACTCGATCTCAACTCGATTCAATCCTTGAACCTGCATTCTGCACTATCGTATCTCATCTCTCTAACTCCGATTTCGATTCTTACGTCCTCTCCGAATCGAGTCTCTTCGTTTATCCACATACGATCATCCTCAAAACTTGCGGCACCACCAAGCTTCTCCTCTCCATTCCGATGATTCTCGAACTTGCTGATTCGATCAAACTCTCCGCTGTCGCCGTGAAATACTCCCGCGGAACCTTCATCTTCCCCAACAATCAACCTGCTCCTCACCGTAGCTTCTCCGAGGAAGTTACCGCACTTAATGTCTACTTTGGTGATTTCTACTCCGAGGCGTACGTGATCGGCGATCCGGCTGTTCCGAATCGCAACTGGCACATCTACTCAGCCGTAAAATCGCGTACGACCGTGAATCGTACGGATATGATTACTCTGGAAATGTGTATGACGGGTTTGAACAGAGAAAAGGCCGCGGTGTTTTTCAAAAAATCTGGAGGCAACTCATCGGCGGAGAAAATGACGAAAATGTCCGGAATCTCTGAGATAATTCCGAATCATGCCATCTGCGATTTTGAATTTGATCCGTGTGGATACTCCATGAACGGGATCGAAGGTGCAGCGTACTCTACTGTGCACGTGACTCCAGAGGATGGTTTCAGTTACGCCAGCTACGAGGCGATGGGCTTCGATGTGGCGGAGCTTCCTTTCTCGCATCTGGTAAGCAGGGCGCTCCGGTGCTTTTCTCCGGCGGAATTCTCGATCGCCATCACGTCGAGCAGCGGCGGCGGCTCCCACACGTGGTCTGTTGACGATGCGGACGTGGAGGGGTACACGTGTGATAACATGGTGAAGCAGGAGCTGCCAGGTGGCGAGTGGCTAGTTTACCGTACGTACACAGTGGATAGAAGAAGAAGGTGCGCCGAGCTCCCACCGTGCAAGTCGCTGCTGCTGCTGCAGTGCTGGAAGGAGGCCGCCGCCGCCTCCGATGTGGGTGAGGAAGAGGCTGTGCTTCGCCGTGTGTTGTCGGCCTAG

mRNA sequence

ATGACTGTGTTCACCAAACTCCTAGAGGCATCTGCGGCTCCGCAACAATCTCCTTCTCCAATCGGTTTCGAAGGCTTCGAAAAACGCCTGGAAATCACATTCGCAAAACTGCCTATTTTTCAGGACTCTGAAGGACTTGGTCTCCGAGCTTTGACTCGATCTCAACTCGATTCAATCCTTGAACCTGCATTCTGCACTATCGTATCTCATCTCTCTAACTCCGATTTCGATTCTTACGTCCTCTCCGAATCGAGTCTCTTCGTTTATCCACATACGATCATCCTCAAAACTTGCGGCACCACCAAGCTTCTCCTCTCCATTCCGATGATTCTCGAACTTGCTGATTCGATCAAACTCTCCGCTGTCGCCGTGAAATACTCCCGCGGAACCTTCATCTTCCCCAACAATCAACCTGCTCCTCACCGTAGCTTCTCCGAGGAAGTTACCGCACTTAATGTCTACTTTGGTGATTTCTACTCCGAGGCGTACGTGATCGGCGATCCGGCTGTTCCGAATCGCAACTGGCACATCTACTCAGCCGTAAAATCGCGTACGACCGTGAATCGTACGGATATGATTACTCTGGAAATGTGTATGACGGGTTTGAACAGAGAAAAGGCCGCGGTGTTTTTCAAAAAATCTGGAGGCAACTCATCGGCGGAGAAAATGACGAAAATGTCCGGAATCTCTGAGATAATTCCGAATCATGCCATCTGCGATTTTGAATTTGATCCGTGTGGATACTCCATGAACGGGATCGAAGGTGCAGCGTACTCTACTGTGCACGTGACTCCAGAGGATGGTTTCAGTTACGCCAGCTACGAGGCGATGGGCTTCGATGTGGCGGAGCTTCCTTTCTCGCATCTGGTAAGCAGGGCGCTCCGGTGCTTTTCTCCGGCGGAATTCTCGATCGCCATCACGTCGAGCAGCGGCGGCGGCTCCCACACGTGGTCTGTTGACGATGCGGACGTGGAGGGGTACACGTGTGATAACATGGTGAAGCAGGAGCTGCCAGGTGGCGAGTGGCTAGTTTACCGTACGTACACAGTGGATAGAAGAAGAAGGTGCGCCGAGCTCCCACCGTGCAAGTCGCTGCTGCTGCTGCAGTGCTGGAAGGAGGCCGCCGCCGCCTCCGATGTGGGTGAGGAAGAGGCTGTGCTTCGCCGTGTGTTGTCGGCCTAG

Coding sequence (CDS)

ATGACTGTGTTCACCAAACTCCTAGAGGCATCTGCGGCTCCGCAACAATCTCCTTCTCCAATCGGTTTCGAAGGCTTCGAAAAACGCCTGGAAATCACATTCGCAAAACTGCCTATTTTTCAGGACTCTGAAGGACTTGGTCTCCGAGCTTTGACTCGATCTCAACTCGATTCAATCCTTGAACCTGCATTCTGCACTATCGTATCTCATCTCTCTAACTCCGATTTCGATTCTTACGTCCTCTCCGAATCGAGTCTCTTCGTTTATCCACATACGATCATCCTCAAAACTTGCGGCACCACCAAGCTTCTCCTCTCCATTCCGATGATTCTCGAACTTGCTGATTCGATCAAACTCTCCGCTGTCGCCGTGAAATACTCCCGCGGAACCTTCATCTTCCCCAACAATCAACCTGCTCCTCACCGTAGCTTCTCCGAGGAAGTTACCGCACTTAATGTCTACTTTGGTGATTTCTACTCCGAGGCGTACGTGATCGGCGATCCGGCTGTTCCGAATCGCAACTGGCACATCTACTCAGCCGTAAAATCGCGTACGACCGTGAATCGTACGGATATGATTACTCTGGAAATGTGTATGACGGGTTTGAACAGAGAAAAGGCCGCGGTGTTTTTCAAAAAATCTGGAGGCAACTCATCGGCGGAGAAAATGACGAAAATGTCCGGAATCTCTGAGATAATTCCGAATCATGCCATCTGCGATTTTGAATTTGATCCGTGTGGATACTCCATGAACGGGATCGAAGGTGCAGCGTACTCTACTGTGCACGTGACTCCAGAGGATGGTTTCAGTTACGCCAGCTACGAGGCGATGGGCTTCGATGTGGCGGAGCTTCCTTTCTCGCATCTGGTAAGCAGGGCGCTCCGGTGCTTTTCTCCGGCGGAATTCTCGATCGCCATCACGTCGAGCAGCGGCGGCGGCTCCCACACGTGGTCTGTTGACGATGCGGACGTGGAGGGGTACACGTGTGATAACATGGTGAAGCAGGAGCTGCCAGGTGGCGAGTGGCTAGTTTACCGTACGTACACAGTGGATAGAAGAAGAAGGTGCGCCGAGCTCCCACCGTGCAAGTCGCTGCTGCTGCTGCAGTGCTGGAAGGAGGCCGCCGCCGCCTCCGATGTGGGTGAGGAAGAGGCTGTGCTTCGCCGTGTGTTGTCGGCCTAG

Protein sequence

MTVFTKLLEASAAPQQSPSPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSHLSNSDFDSYVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGTFIFPNNQPAPHRSFSEEVTALNVYFGDFYSEAYVIGDPAVPNRNWHIYSAVKSRTTVNRTDMITLEMCMTGLNREKAAVFFKKSGGNSSAEKMTKMSGISEIIPNHAICDFEFDPCGYSMNGIEGAAYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAITSSSGGGSHTWSVDDADVEGYTCDNMVKQELPGGEWLVYRTYTVDRRRRCAELPPCKSLLLLQCWKEAAAASDVGEEEAVLRRVLSA

Homology

[Close]

BLAST of CmaCh12G008370 vs. ExPASy Swiss-Prot
Match: Q0JC10 (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica OX=39947 GN=SAMDC PE=2 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-114
Identity = 211/343 (61.52%), Postives = 260/343 (75.80%), Query Frame = 0


Query: 11  SAAPQQSPSPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSH 70
           SAA     S IGFEG+EKRLEITF++ P+F D +G GLRAL+R+Q+DS+L+ A CTIVS 
Sbjct: 5   SAADPPPVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSE 64

Query: 71  LSNSDFDSYVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGT 130
           LSN DFDSYVLSESSLF+Y   I++KTCGTTKLLL+IP ILELA+ + +   AVKYSRG 
Sbjct: 65  LSNKDFDSYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRGM 124

Query: 131 FIFPNNQPAPHRSFSEEVTALNVYFGDFYS--EAYVIGDPAVPNRNWHIYSAVKSRTTVN 190
           FIFP+ QPAPHRSFSEEV  LN YFG   S   AYVIGDPA P + WHIY A    T   
Sbjct: 125 FIFPSAQPAPHRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYA----TQHP 184

Query: 191 RTDMITLEMCMTGLNREKAAVFFKKS--GGNSSAEKMTKMSGISEIIPNHAICDFEFDPC 250
              M+TLEMCMTGL++EKA+VFFK S  G  S A++MTK+SGIS+IIP   ICDF+F+PC
Sbjct: 185 EQPMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPC 244

Query: 251 GYSMNGIEGAAYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAI 310
           GYSMN I G+A+ST+HVTPEDGFSYASYE +GFD + L +  LV R LRCF P+EFS+A+
Sbjct: 245 GYSMNAIHGSAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAV 304

Query: 311 TSSSG-GGSHTWSVDDADVEGYTCDNMVKQELPGGEWLVYRTY 349
           T   G G + TW+  + + + Y C+NMV+QELP G  L+Y+++
Sbjct: 305 TIFGGHGHAGTWA-KELNADAYKCNNMVEQELPCGGLLIYQSF 342

[Close]

BLAST of CmaCh12G008370 vs. ExPASy Swiss-Prot
Match: O24575 (S-adenosylmethionine decarboxylase proenzyme OS=Zea mays OX=4577 GN=SAMDC PE=2 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.8e-114
Identity = 212/343 (61.81%), Postives = 255/343 (74.34%), Query Frame = 0


Query: 11  SAAPQQSPSPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSH 70
           SAA     S IGFEG+EKRLEITF++ P+F D  G GLRAL+R+Q+DS+L+ A CTIVS 
Sbjct: 5   SAADASPVSAIGFEGYEKRLEITFSEAPVFVDPHGRGLRALSRAQIDSVLDLARCTIVSE 64

Query: 71  LSNSDFDSYVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGT 130
           LSN DFDSYVLSESSLF+YP  I++KTCGTTKLLL+IP ILELA+ + +   AVKYSRGT
Sbjct: 65  LSNKDFDSYVLSESSLFIYPLKIVIKTCGTTKLLLTIPRILELAEELSMPLAAVKYSRGT 124

Query: 131 FIFPNNQPAPHRSFSEEVTALNVYFGDFYS--EAYVIGDPAVPNRNWHIYSAVKSRTTVN 190
           FIFP  QPAPHRSFSEEV ALN YFG   S   AYVIGDPA P + WH++ A    T   
Sbjct: 125 FIFPGAQPAPHRSFSEEVAALNRYFGGLKSGGNAYVIGDPARPGQKWHVFYA----TEYP 184

Query: 191 RTDMITLEMCMTGLNREKAAVFFKKS--GGNSSAEKMTKMSGISEIIPNHAICDFEFDPC 250
              M+ LEMCMTGL+++KA VFFK +  G  + A++MTK+SGISEIIP   ICDF+F+PC
Sbjct: 185 EQPMVNLEMCMTGLDKKKACVFFKTNADGNTTCAKEMTKLSGISEIIPEMEICDFDFEPC 244

Query: 251 GYSMNGIEGAAYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAI 310
           GYSMN I G+A+ST+HVTPEDGFSYASYE MG D   L +  LV R LRCF P+EFS+A+
Sbjct: 245 GYSMNAIHGSAFSTIHVTPEDGFSYASYEVMGLDATALSYGDLVKRVLRCFGPSEFSVAV 304

Query: 311 TSSSG-GGSHTWSVDDADVEGYTCDNMVKQELPGGEWLVYRTY 349
           T   G G + TW       E Y C+NMV+QELPGG  LVY+++
Sbjct: 305 TIFGGRGHAGTWG-KALGAEVYDCNNMVEQELPGGGLLVYQSF 342

[Close]

BLAST of CmaCh12G008370 vs. ExPASy Swiss-Prot
Match: A2XV58 (S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica OX=39946 GN=SAMDC PE=2 SV=2)

HSP 1 Score: 414.1 bits (1063), Expect = 1.8e-114
Identity = 211/343 (61.52%), Postives = 259/343 (75.51%), Query Frame = 0


Query: 11  SAAPQQSPSPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSH 70
           SAA     S IGFEG+EKRLEITF++ P+F D +G GLRAL+R+Q+DS+L+ A CTIVS 
Sbjct: 5   SAADPPPVSAIGFEGYEKRLEITFSEAPVFADPDGRGLRALSRAQIDSVLDLARCTIVSE 64

Query: 71  LSNSDFDSYVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGT 130
           LSN DFDSYVLSESSLF+Y   I++KTCGTTKLLL+IP ILELA+ + +   AVKYSRG 
Sbjct: 65  LSNKDFDSYVLSESSLFIYSDKIVIKTCGTTKLLLTIPRILELAEGLSMPLAAVKYSRGM 124

Query: 131 FIFPNNQPAPHRSFSEEVTALNVYFGDFYS--EAYVIGDPAVPNRNWHIYSAVKSRTTVN 190
           FIFP+ QPAPHRSFSEEV  LN YFG   S   AYVIGDPA P + WHIY A    T   
Sbjct: 125 FIFPSAQPAPHRSFSEEVAVLNRYFGHLKSGGNAYVIGDPAKPGQKWHIYYA----TQHP 184

Query: 191 RTDMITLEMCMTGLNREKAAVFFKKS--GGNSSAEKMTKMSGISEIIPNHAICDFEFDPC 250
              M+TLEMCMTGL++EKA+VFFK S  G  S A++MTK+SGIS+IIP   ICDF+F+PC
Sbjct: 185 EQPMVTLEMCMTGLDKEKASVFFKTSADGHTSCAKEMTKLSGISDIIPEMEICDFDFEPC 244

Query: 251 GYSMNGIEGAAYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAI 310
           GYSMN I G A+ST+HVTPEDGFSYASYE +GFD + L +  LV R LRCF P+EFS+A+
Sbjct: 245 GYSMNAIHGLAFSTIHVTPEDGFSYASYEVVGFDASTLAYGDLVKRVLRCFGPSEFSVAV 304

Query: 311 TSSSG-GGSHTWSVDDADVEGYTCDNMVKQELPGGEWLVYRTY 349
           T   G G + TW+  + + + Y C+NMV+QELP G  L+Y+++
Sbjct: 305 TIFGGHGHAGTWA-KELNADAYKCNNMVEQELPCGGLLIYQSF 342

[Close]

BLAST of CmaCh12G008370 vs. ExPASy Swiss-Prot
Match: Q42829 (S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense OX=15565 GN=SAMDC PE=2 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.7e-109
Identity = 203/338 (60.06%), Postives = 248/338 (73.37%), Query Frame = 0


Query: 19  SPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSHLSNSDFDS 78
           S IGFEG+EKRLEITF++  IF D  G GLRAL+R+Q+DS+L+ A CTIVS LSN DFDS
Sbjct: 6   SAIGFEGYEKRLEITFSEASIFADPHGRGLRALSRAQIDSVLDLARCTIVSELSNKDFDS 65

Query: 79  YVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGTFIFPNNQP 138
           YVLSESSLF+Y   I++KTCGTT LLL+IP ILELA+ + +   AVKYSRG FIFP  QP
Sbjct: 66  YVLSESSLFIYSQKIVIKTCGTTMLLLTIPRILELAEELCMPLAAVKYSRGMFIFPGAQP 125

Query: 139 APHRSFSEEVTALNVYFGDFYS--EAYVIGDPAVPNRNWHIYSAVKSRTTVNRTDMITLE 198
           APHRSFSEEV  LN YFG   S   AYVIGDPA P + WHIY A    T      M+TLE
Sbjct: 126 APHRSFSEEVDVLNRYFGHLNSGGNAYVIGDPAKPGQKWHIYYA----TEQPEQPMVTLE 185

Query: 199 MCMTGLNREKAAVFFK--KSGGNSSAEKMTKMSGISEIIPNHAICDFEFDPCGYSMNGIE 258
           MCMTGL++ KA+VFFK    G  S A++MTK+SGIS+IIP   +CDF+F+PCGYSMN I 
Sbjct: 186 MCMTGLDKTKASVFFKTHADGHVSCAKEMTKLSGISDIIPEMEVCDFDFEPCGYSMNAIN 245

Query: 259 GAAYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAITSSSG-GG 318
           G+A+ST+HVTPEDGFSYASYE  G D + L +  +V R LRCF P+EFS+A+T   G G 
Sbjct: 246 GSAFSTIHVTPEDGFSYASYEVQGMDASALAYGDIVKRVLRCFGPSEFSVAVTIFGGRGH 305

Query: 319 SHTWSVDDADVEGYTCDNMVKQELPGGEWLVYRTYTVD 352
           + TW     D E Y C+N+V+QELP G  L+Y+++  +
Sbjct: 306 AATWG-KKLDAEAYDCNNVVEQELPCGGVLIYQSFAAN 338

[Close]

BLAST of CmaCh12G008370 vs. ExPASy Swiss-Prot
Match: Q96471 (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil OX=35883 GN=SAMDC PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 3.4e-97
Identity = 196/361 (54.29%), Postives = 244/361 (67.59%), Query Frame = 0


Query: 17  SPSPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSHLSNSDF 76
           S S IGFEG+EKRLEI+F +  IF D EG GLRAL++ QLD +L+PA CTIVS LSN++ 
Sbjct: 4   STSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSKEQLDKVLKPAECTIVSSLSNNEV 63

Query: 77  DSYVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGTFIFPNN 136
           DSYVLSESSLFVYP+ II+KTCGTTKLLLSIP ILELAD + L   +VKY+RG+F FP  
Sbjct: 64  DSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPPILELADGLSLKVKSVKYTRGSFNFPEV 123

Query: 137 QPAPHRSFSEEVTALNVYFGDF--YSEAYVIGDPAVPNRNWHIYSAVKSRTTVNRTDMIT 196
           QP PHR+FSEEV  L+ YFG     S+AYV+G  A   + WH+YSA  + +  N   + T
Sbjct: 124 QPYPHRNFSEEVAILDGYFGKLGTGSKAYVMGG-AGKQQQWHVYSA-SAESAENTFPIYT 183

Query: 197 LEMCMTGLNREKAAVFFKKSGGNSSAEKMTKMSGISEIIPNHAICDFEFDPCGYSMNGIE 256
           LEMCMTGL+++ A+VFFK    +SSA  MT  SGI +I+P   ICDF+F+PCGYSMN +E
Sbjct: 184 LEMCMTGLDKKSASVFFKTQ--SSSAAVMTDASGIRKILPGSDICDFDFEPCGYSMNAVE 243

Query: 257 GAAYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAITSSSGGGS 316
           G   ST+HVTPEDGFSYAS+EAMG+D  ++    L+ R L CF PAEFS+A+   S  G 
Sbjct: 244 GGTISTIHVTPEDGFSYASFEAMGYDFKDVNLDALIQRVLSCFQPAEFSVALHCDS-IGE 303

Query: 317 HTWSVDDADVEGYTCDNMVKQELPGGEWLVYRTYTVDRRRRCAELPPCKS--LLLLQCWK 374
              SV + DV+GY C     + L  G  ++Y  +T            C S    LL CW 
Sbjct: 304 KLDSVFELDVKGYACGERSYEALGKGGSIMYCGFT--------STGSCGSPRSTLLCCWS 351

[Close]

BLAST of CmaCh12G008370 vs. TAIR 10
Match: AT3G02470.1 (S-adenosylmethionine decarboxylase )

HSP 1 Score: 349.4 bits (895), Expect = 3.9e-96
Identity = 181/313 (57.83%), Postives = 227/313 (72.52%), Query Frame = 0


Query: 19  SPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSHLSNSDFDS 78
           S IGFEG+EKRLE+TF +  IFQDS+GLGLRALT+SQLD IL PA CTIVS LSN   DS
Sbjct: 4   SAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQLDS 63

Query: 79  YVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGTFIFPNNQP 138
           YVLSESS FVYP+ +I+KTCGTTKLLLSIP +L+LA  + LS  +VKY+RG+F+ P  QP
Sbjct: 64  YVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQP 123

Query: 139 APHRSFSEEVTALNVYFGD--FYSEAYVIGDPAVPNRNWHIYSAVKSRTTVNRTDMITLE 198
            PHRSFSEEV+ L+ +F      S AY++G+     + WH+Y+A    ++    ++ TLE
Sbjct: 124 FPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDD-ETKKWHVYAASAQDSSNCNNNVYTLE 183

Query: 199 MCMTGLNREKAAVFFKKSGGNSSAEKMTKMSGISEIIPNHAICDFEFDPCGYSMNGIEGA 258
           MCMTGL+REKAAVF+K     + +  MT  SGI +I+P   ICDFEF+PCGYSMN IEG 
Sbjct: 184 MCMTGLDREKAAVFYKDEADKTGS--MTDNSGIRKILPKSEICDFEFEPCGYSMNSIEGD 243

Query: 259 AYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAITSSSGGGSHT 318
           A ST+HVTPEDGFSYAS+EA+G+D   L  S LV+R L CF P +FS+A+ SS G  S+ 
Sbjct: 244 AISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGANSYK 303

Query: 319 WSVDDADVEGYTC 330
             +   D+E Y C
Sbjct: 304 PEI-TVDLEDYGC 312

[Close]

BLAST of CmaCh12G008370 vs. TAIR 10
Match: AT3G02470.3 (S-adenosylmethionine decarboxylase )

HSP 1 Score: 349.4 bits (895), Expect = 3.9e-96
Identity = 181/313 (57.83%), Postives = 227/313 (72.52%), Query Frame = 0


Query: 19  SPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSHLSNSDFDS 78
           S IGFEG+EKRLE+TF +  IFQDS+GLGLRALT+SQLD IL PA CTIVS LSN   DS
Sbjct: 4   SAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQLDS 63

Query: 79  YVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGTFIFPNNQP 138
           YVLSESS FVYP+ +I+KTCGTTKLLLSIP +L+LA  + LS  +VKY+RG+F+ P  QP
Sbjct: 64  YVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQP 123

Query: 139 APHRSFSEEVTALNVYFGD--FYSEAYVIGDPAVPNRNWHIYSAVKSRTTVNRTDMITLE 198
            PHRSFSEEV+ L+ +F      S AY++G+     + WH+Y+A    ++    ++ TLE
Sbjct: 124 FPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDD-ETKKWHVYAASAQDSSNCNNNVYTLE 183

Query: 199 MCMTGLNREKAAVFFKKSGGNSSAEKMTKMSGISEIIPNHAICDFEFDPCGYSMNGIEGA 258
           MCMTGL+REKAAVF+K     + +  MT  SGI +I+P   ICDFEF+PCGYSMN IEG 
Sbjct: 184 MCMTGLDREKAAVFYKDEADKTGS--MTDNSGIRKILPKSEICDFEFEPCGYSMNSIEGD 243

Query: 259 AYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAITSSSGGGSHT 318
           A ST+HVTPEDGFSYAS+EA+G+D   L  S LV+R L CF P +FS+A+ SS G  S+ 
Sbjct: 244 AISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGANSYK 303

Query: 319 WSVDDADVEGYTC 330
             +   D+E Y C
Sbjct: 304 PEI-TVDLEDYGC 312

[Close]

BLAST of CmaCh12G008370 vs. TAIR 10
Match: AT3G02470.4 (S-adenosylmethionine decarboxylase )

HSP 1 Score: 349.4 bits (895), Expect = 3.9e-96
Identity = 181/313 (57.83%), Postives = 227/313 (72.52%), Query Frame = 0


Query: 19  SPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSHLSNSDFDS 78
           S IGFEG+EKRLE+TF +  IFQDS+GLGLRALT+SQLD IL PA CTIVS LSN   DS
Sbjct: 4   SAIGFEGYEKRLEVTFFEPSIFQDSKGLGLRALTKSQLDEILTPAACTIVSSLSNDQLDS 63

Query: 79  YVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGTFIFPNNQP 138
           YVLSESS FVYP+ +I+KTCGTTKLLLSIP +L+LA  + LS  +VKY+RG+F+ P  QP
Sbjct: 64  YVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQP 123

Query: 139 APHRSFSEEVTALNVYFGD--FYSEAYVIGDPAVPNRNWHIYSAVKSRTTVNRTDMITLE 198
            PHRSFSEEV+ L+ +F      S AY++G+     + WH+Y+A    ++    ++ TLE
Sbjct: 124 FPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDD-ETKKWHVYAASAQDSSNCNNNVYTLE 183

Query: 199 MCMTGLNREKAAVFFKKSGGNSSAEKMTKMSGISEIIPNHAICDFEFDPCGYSMNGIEGA 258
           MCMTGL+REKAAVF+K     + +  MT  SGI +I+P   ICDFEF+PCGYSMN IEG 
Sbjct: 184 MCMTGLDREKAAVFYKDEADKTGS--MTDNSGIRKILPKSEICDFEFEPCGYSMNSIEGD 243

Query: 259 AYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAITSSSGGGSHT 318
           A ST+HVTPEDGFSYAS+EA+G+D   L  S LV+R L CF P +FS+A+ SS G  S+ 
Sbjct: 244 AISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCFEPKQFSVAVHSSVGANSYK 303

Query: 319 WSVDDADVEGYTC 330
             +   D+E Y C
Sbjct: 304 PEI-TVDLEDYGC 312

[Close]

BLAST of CmaCh12G008370 vs. TAIR 10
Match: AT5G15950.1 (Adenosylmethionine decarboxylase family protein )

HSP 1 Score: 337.4 bits (864), Expect = 1.5e-92
Identity = 172/321 (53.58%), Postives = 229/321 (71.34%), Query Frame = 0


Query: 19  SPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSHLSNSDFDS 78
           S IGFEG+EKRLE+TF +  +F D++G GLRAL +SQ+D IL+PA CTIVS LSN   DS
Sbjct: 4   SAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQLDS 63

Query: 79  YVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGTFIFPNNQP 138
           YVLSESSLF++P+ I++KTCGTTKLLLSI  +L LA  + L   AV+Y+RG+F+ P  QP
Sbjct: 64  YVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPGGQP 123

Query: 139 APHRSFSEEVTALNVYFG--DFYSEAYVIGDPAVPNRNWHIYSAVKSRTTVNRTDMITLE 198
            PHR+FSEEV+ L+ +F      S AY++G+     + WH+YSA  S  + N+ ++ TLE
Sbjct: 124 FPHRNFSEEVSVLDGHFAKLGLSSVAYLMGNDD-ETKKWHVYSA-SSANSNNKNNVYTLE 183

Query: 199 MCMTGLNREKAAVFFKKSGGNSSAEKMTKMSGISEIIPNHAICDFEFDPCGYSMNGIEGA 258
           MCMTGL+++KA+VF+K    +SSA  MT  SGI +I+P   ICDFEF+PCGYSMN IEG 
Sbjct: 184 MCMTGLDKDKASVFYKNE--SSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEGD 243

Query: 259 AYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAITSSSGGGSHT 318
           A ST+HVTPEDGFSYAS+EA+G+D   +  SHLVS+ L CF P +FS+A+ S+    S+ 
Sbjct: 244 AISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVAQKSYD 303

Query: 319 WSVDDADVEGYTCDNMVKQEL 338
             +   D++ Y C     + L
Sbjct: 304 SGL-SVDLDDYGCKESTMESL 319

[Close]

BLAST of CmaCh12G008370 vs. TAIR 10
Match: AT5G15950.2 (Adenosylmethionine decarboxylase family protein )

HSP 1 Score: 337.4 bits (864), Expect = 1.5e-92
Identity = 172/321 (53.58%), Postives = 229/321 (71.34%), Query Frame = 0


Query: 19  SPIGFEGFEKRLEITFAKLPIFQDSEGLGLRALTRSQLDSILEPAFCTIVSHLSNSDFDS 78
           S IGFEG+EKRLE+TF +  +F D++G GLRAL +SQ+D IL+PA CTIVS LSN   DS
Sbjct: 4   SAIGFEGYEKRLEVTFFEPGLFLDTQGKGLRALAKSQIDEILQPAECTIVSSLSNDQLDS 63

Query: 79  YVLSESSLFVYPHTIILKTCGTTKLLLSIPMILELADSIKLSAVAVKYSRGTFIFPNNQP 138
           YVLSESSLF++P+ I++KTCGTTKLLLSI  +L LA  + L   AV+Y+RG+F+ P  QP
Sbjct: 64  YVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPGGQP 123

Query: 139 APHRSFSEEVTALNVYFG--DFYSEAYVIGDPAVPNRNWHIYSAVKSRTTVNRTDMITLE 198
            PHR+FSEEV+ L+ +F      S AY++G+     + WH+YSA  S  + N+ ++ TLE
Sbjct: 124 FPHRNFSEEVSVLDGHFAKLGLSSVAYLMGNDD-ETKKWHVYSA-SSANSNNKNNVYTLE 183

Query: 199 MCMTGLNREKAAVFFKKSGGNSSAEKMTKMSGISEIIPNHAICDFEFDPCGYSMNGIEGA 258
           MCMTGL+++KA+VF+K    +SSA  MT  SGI +I+P   ICDFEF+PCGYSMN IEG 
Sbjct: 184 MCMTGLDKDKASVFYKNE--SSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEGD 243

Query: 259 AYSTVHVTPEDGFSYASYEAMGFDVAELPFSHLVSRALRCFSPAEFSIAITSSSGGGSHT 318
           A ST+HVTPEDGFSYAS+EA+G+D   +  SHLVS+ L CF P +FS+A+ S+    S+ 
Sbjct: 244 AISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCFKPKQFSVAVHSTVAQKSYD 303

Query: 319 WSVDDADVEGYTCDNMVKQEL 338
             +   D++ Y C     + L
Sbjct: 304 SGL-SVDLDDYGCKESTMESL 319

The following BLAST results are available for this feature:

BLAST of CmaCh12G008370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0JC10	1.1e-114	61.52	S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. japonica OX=...	[more]
O24575	1.8e-114	61.81	S-adenosylmethionine decarboxylase proenzyme OS=Zea mays OX=4577 GN=SAMDC PE=2 S...	[more]
A2XV58	1.8e-114	61.52	S-adenosylmethionine decarboxylase proenzyme OS=Oryza sativa subsp. indica OX=39...	[more]
Q42829	1.7e-109	60.06	S-adenosylmethionine decarboxylase proenzyme OS=Hordeum chilense OX=15565 GN=SAM...	[more]
Q96471	3.4e-97	54.29	S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil OX=35883 GN=SAMDC PE...	[more]

BLAST of CmaCh12G008370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02470.1	3.9e-96	57.83	S-adenosylmethionine decarboxylase	[more]
AT3G02470.3	3.9e-96	57.83	S-adenosylmethionine decarboxylase	[more]
AT3G02470.4	3.9e-96	57.83	S-adenosylmethionine decarboxylase	[more]
AT5G15950.1	1.5e-92	53.58	Adenosylmethionine decarboxylase family protein	[more]
AT5G15950.2	1.5e-92	53.58	Adenosylmethionine decarboxylase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001985	S-adenosylmethionine decarboxylase	TIGRFAM	TIGR00535	TIGR00535	coord: 23..348 e-value: 4.4E-119 score: 395.3
IPR001985	S-adenosylmethionine decarboxylase	PIRSF	PIRSF001355	SAM_decarbox_euk	coord: 5..357 e-value: 2.8E-105 score: 350.0
IPR001985	S-adenosylmethionine decarboxylase	PFAM	PF01536	SAM_decarbox	coord: 22..348 e-value: 3.3E-106 score: 355.3
IPR001985	S-adenosylmethionine decarboxylase	PANTHER	PTHR11570	S-ADENOSYLMETHIONINE DECARBOXYLASE	coord: 17..371
None	No IPR available	GENE3D	3.30.360.50		coord: 13..83 e-value: 3.8E-23 score: 83.3
None	No IPR available	GENE3D	3.60.90.10		coord: 84..351 e-value: 2.3E-90 score: 304.4
None	No IPR available	PANTHER	PTHR11570:SF24	S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME	coord: 17..371
IPR018166	S-adenosylmethionine decarboxylase, conserved site	PROSITE	PS01336	ADOMETDC	coord: 78..88
IPR016067	S-adenosylmethionine decarboxylase, core	SUPERFAMILY	56276	S-adenosylmethionine decarboxylase	coord: 22..348

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G008370.1	CmaCh12G008370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006557	S-adenosylmethioninamine biosynthetic process
biological_process	GO:0008295	spermidine biosynthetic process
biological_process	GO:0006597	spermine biosynthetic process
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004014	adenosylmethionine decarboxylase activity