CmaCh12G000860 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G000860
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	60S ribosomal protein L5-like
Location	Cma_Chr12: 330900 .. 334279 (-)
RNA-Seq Expression	CmaCh12G000860
Synteny	CmaCh12G000860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATCATACGATCTCAACCGTTGATCACGTCACCTTAGGGTTCCGATAAATAACAGATTCTTCGACCAGAAAACTCCTCTGATTGCTTAGGCCGTCTCCGCGTTTCTCTTTCCCTCAGTCTACTTCAGGACTTGGCTTTCGAGATGGTGAGTCTTTTGCTCAACTCCTAAAGAATATTCTAGATTCTTCCATCGTTCTTGAAGCTCAGCTGAATTTTAGCATTCAGTTGATGCAATGGTACAGAAATTAGCTGCATTTTGTACTTGTTTTCTTTTTTCTTTCTTGGGGATCTCGACGTTGCATTAGCTTTTAATTCGTTCATATACTCGCATTCAATTGATATGTTCTGTTGTTTGATCGAGTTGTTTTCAAGAACATTGCGTCTCATTTATGATACTTGTTTCGGTGTCGAAGTGTAGTAAGTTTAAGTGGTATATATTTTGCTCATTATGTTCGTTTATTGCCGACGATTGTTACCTGTGAATTATCACTGGCATGTCTGATATCTTCAGGCGTTTGGGGAACGATTGAAGCAACTACATTGTTTCGCTTGATTTTTTTTTTTCATTGTTCAATATTGCTCCAAGAAATCAGACAAAAATTTATGGTTTTTTTTTTTTTTTTTTTTTTTTTTACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGCTTTTGCGAAAGCTCAAAAGACGAAAGCGTACTTCAAACGATACCAGGTCAAGTTCAGGAGAAGAAGAGGTATTTCCAATTTTTTGTTGTTTTATCTTGATGAATAGACTTGAGAAGTTTTTCAGTTTCTGATGTTGATCTCTTCTCCTGATAATGTACAGATGGTAAGACTGATTACCGTGCTAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAACACTCCCAAATACCGTTTTGTTATCAGATTTGTATCCTCATGCAGTTTGCTAAGTAGCGCAGTGATGTTTTGTTTTATTCTCCAATTGTTTCTTGATAAACTTGCAATGAGTGTTTTGGATCTTCCTCTCCCTTTTTCCCCTACTTCATTTTTCATGTCAGGGATACGAATACATGCCTCAACATAGGAATTTTTAGTTGGATGCATCATTTACTTAAGAGTTACGAGATGTAGGTTCTGTGGATTGGTCTATTGATTTATTTTGCAAGCTTTGATAGGCTTCCTTGTGCTATTCTGTGGTATAGTTATTCATCAAATTTATTAACATAGGATCAGTTCTTTTCCTTTTATGGTCCATTTAGATTCCTGCAAGTTCTCAATTTTCTATAATTTTCTTCGAATACATTTGACTTTCTGTTAATAGCTATATGTACCTTTTTATGTGTTGTTATGAATGGTGAGCTCTACTTGTGTTCACTTGAGAAATGGGAACCTTGATGTTAATATCTAGTCTAATAAGGATATTACAGCACAAATATTATCTTCTAGCATTGCTGGTGACATGGTTCTTGCTTCAGCTTATTCTCATGAGCTGCCTCATTACGGTCTTGAAGTTGGTCTAACAAATTATGCAGCAGGTAATATTTTGCACTGCATGTCTCTGGGTGAGTTTTTTCCCCCATCTTTTTCTAACTTCTTCATTTGTCTGGAATGGGTGTATGAAACGTGTGTAGCCTACTGCACTGGGCTCCTCTTGGCTCGCCGTGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGAGGGTAATCTTGAGGTAATCTATCAGTCTCCTCCATCTTCTCTTATAAAAGAACAAAATGAAATCTAAATAAAATGAAGTTCACCTCTTCTGTTATGGCTTACCCATTCCATTAAAAGTTTTATCCACTGGAAGTGTTTGTATAATTAGGTTACCGGAGAGGATTACTCTGTGGAACCCACAGATAGCCGAAGGCCTTTCAGAGCCCTCCTTGATGTAGGTTTAGTCCGAACAACAACAGGAAATCGTGTTTTTGGTGCCCTCAAGGTATTTTTAGCTATTCCATTTAAGATGAGCTTCAAGATCCGTCCTTTTTCTTCTATTTGCAATATTTTTATATGGTTTGATGAGTGTTGCATGAGTGGCTTTATTTATTTTTTTTAACCCATGGCTGGGTACAAAATGAGTAATATATCTCGTCGAACCAATTGTACATTTATGTGACATGTATATGTGTGTATTTTCTATATTTTGTTCTTTCGAACGTCTGTTTCAAATTTGAGCTTCCATGTTCATTATAATTTTGCTGCTTATTGTAATCGTGATGATAAGCTTTCAAGTTCACTGCAGTATCTGTTCGCGTTGTAATTTGAAAGATTACAAATTTCCAATTGGGACAGTAAATATTAGTGGCTCTTGGTATCTTTTCTCAAACCACTGAAGCTATATATTTCACGTCACACAGGGAGCTTTAGATGGTGGACTAGATGTACCACACTCTGTCAAGAGGTTTGCTGGATTTTCAAAGGACAGCAAGGAGCTTGATGCCGAAGTTCATCGCAAATACATATTTGGAGGCCACGTTGCTGCCTATATGAGGGTAAAGTTTCATAAGTTATTTCTTTATAACTATTTCAAAAGTTCCAGTATTAGTGCACAAACGAATTAGAATAGCCATGAAAATTCGTTTTCACTCTGAGTTGTATCACCAGACCTTGATGGAGGATGAGCCAGAGAAGTACCAATCTCAATTCAGTGAATATATCAAGAAGGGGATAGACGCTGACAACATTGAGGAGTTGTTGAAAAAAGTTCACTCTGCCATCCGTTCAGAACCCTTGTTGAAGAAGGTTGAGAAGCAACCACCAAAGAAGCACAAGAGGTAAATGACGAAACTCGGTTCATTTTTCATGATTGAACTAGCATTTTTAGTTCTGCATTCTAACGCGGTTTGTCTGATAGGTATAACTTGAAGAAACTCACGTATGAAGAAAGGAAGGCCAAGTTGGTTGAGCGTTTGAATGCGTTGAATTCTGCTGCAGGAGCTGACGACGACGAAGATGATGAAGAGTGA

mRNA sequence

TATATCATACGATCTCAACCGTTGATCACGTCACCTTAGGGTTCCGATAAATAACAGATTCTTCGACCAGAAAACTCCTCTGATTGCTTAGGCCGTCTCCGCGTTTCTCTTTCCCTCAGTCTACTTCAGGACTTGGCTTTCGAGATGGCTTTTGCGAAAGCTCAAAAGACGAAAGCGTACTTCAAACGATACCAGGTCAAGTTCAGGAGAAGAAGAGATGGTAAGACTGATTACCGTGCTAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAACACTCCCAAATACCGTTTTGTTATCAGATTTGTATCCTCATGCAGTTTGCTAAGTAGCGCATCTAATAAGGATATTACAGCACAAATATTATCTTCTAGCATTGCTGGTGACATGGTTCTTGCTTCAGCTTATTCTCATGAGCTGCCTCATTACGGTCTTGAAGTTGGTCTAACAAATTATGCAGCAGCCTACTGCACTGGGCTCCTCTTGGCTCGCCGTGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGAGGGTAATCTTGAGGTTACCGGAGAGGATTACTCTGTGGAACCCACAGATAGCCGAAGGCCTTTCAGAGCCCTCCTTGATGTAGGTTTAGTCCGAACAACAACAGGAAATCGTGTTTTTGGTGCCCTCAAGGGAGCTTTAGATGGTGGACTAGATGTACCACACTCTGTCAAGAGGTTTGCTGGATTTTCAAAGGACAGCAAGGAGCTTGATGCCGAAGTTCATCGCAAATACATATTTGGAGGCCACGTTGCTGCCTATATGAGGACCTTGATGGAGGATGAGCCAGAGAAGTACCAATCTCAATTCAGTGAATATATCAAGAAGGGGATAGACGCTGACAACATTGAGGAGTTGTTGAAAAAAGTTCACTCTGCCATCCGTTCAGAACCCTTGTTGAAGAAGGTTGAGAAGCAACCACCAAAGAAGCACAAGAGGTATAACTTGAAGAAACTCACGTATGAAGAAAGGAAGGCCAAGTTGGTTGAGCGTTTGAATGCGTTGAATTCTGCTGCAGGAGCTGACGACGACGAAGATGATGAAGAGTGA

Coding sequence (CDS)

ATGGCTTTTGCGAAAGCTCAAAAGACGAAAGCGTACTTCAAACGATACCAGGTCAAGTTCAGGAGAAGAAGAGATGGTAAGACTGATTACCGTGCTAGGATTCGCCTCATTAATCAAGACAAGAACAAGTACAACACTCCCAAATACCGTTTTGTTATCAGATTTGTATCCTCATGCAGTTTGCTAAGTAGCGCATCTAATAAGGATATTACAGCACAAATATTATCTTCTAGCATTGCTGGTGACATGGTTCTTGCTTCAGCTTATTCTCATGAGCTGCCTCATTACGGTCTTGAAGTTGGTCTAACAAATTATGCAGCAGCCTACTGCACTGGGCTCCTCTTGGCTCGCCGTGTCTTGAAGAAGCTTGAGATGGATGATGAGTACGAGGGTAATCTTGAGGTTACCGGAGAGGATTACTCTGTGGAACCCACAGATAGCCGAAGGCCTTTCAGAGCCCTCCTTGATGTAGGTTTAGTCCGAACAACAACAGGAAATCGTGTTTTTGGTGCCCTCAAGGGAGCTTTAGATGGTGGACTAGATGTACCACACTCTGTCAAGAGGTTTGCTGGATTTTCAAAGGACAGCAAGGAGCTTGATGCCGAAGTTCATCGCAAATACATATTTGGAGGCCACGTTGCTGCCTATATGAGGACCTTGATGGAGGATGAGCCAGAGAAGTACCAATCTCAATTCAGTGAATATATCAAGAAGGGGATAGACGCTGACAACATTGAGGAGTTGTTGAAAAAAGTTCACTCTGCCATCCGTTCAGAACCCTTGTTGAAGAAGGTTGAGAAGCAACCACCAAAGAAGCACAAGAGGTATAACTTGAAGAAACTCACGTATGAAGAAAGGAAGGCCAAGTTGGTTGAGCGTTTGAATGCGTTGAATTCTGCTGCAGGAGCTGACGACGACGAAGATGATGAAGAGTGA

Protein sequence

MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAGADDDEDDEE

Homology

[Close]

BLAST of CmaCh12G000860 vs. ExPASy Swiss-Prot
Match: Q6UNT2 (60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.3e-139
Identity = 253/311 (81.35%), Postives = 280/311 (90.03%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           MAFAKAQKTKAYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFV+R      
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR------ 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                SNKDITAQI+S+SIAGD+VLASAYSHELP YGLEVGLTNYAAAYCTGLLLARRVL
Sbjct: 61  ----TSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           K LEMD EYEGN+E TGEDYSVEP D+RRPFRALLDVGL+RTTTGNRVFGALKGALDGGL
Sbjct: 121 KMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           D+PHS KRFAG++K+ ++LD EVHRKYIFGGHVAAYMRTLMEDEPEKYQS FSEYIKKGI
Sbjct: 181 DIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGI 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           +AD +E L KKVH+AIR+ P+ KK +K  PK HKRYNLKKLTY+ERKA+LVERLNALNSA
Sbjct: 241 EADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSA 300

Query: 301 AGADDDEDDEE 312
           A  DDD+D+++
Sbjct: 301 ADGDDDDDEDD 301

[Close]

BLAST of CmaCh12G000860 vs. ExPASy Swiss-Prot
Match: P49227 (60S ribosomal protein L5-2 OS=Arabidopsis thaliana OX=3702 GN=RPL5B PE=2 SV=3)

HSP 1 Score: 475.3 bits (1222), Expect = 5.2e-133
Identity = 241/311 (77.49%), Postives = 271/311 (87.14%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           M F K+ K+ AYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFV+RF     
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                +NKDI AQI+S+SIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           K LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGL
Sbjct: 121 KMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           D+PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+
Sbjct: 181 DIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGV 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           +A++IEE+ KKVH+AIR+EP  KK EK  PK+HKRYNLKKLTYEERK KL+ER+ ALN A
Sbjct: 241 EAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGA 300

Query: 301 AGADDDEDDEE 312
            G DDDEDDEE
Sbjct: 301 GGDDDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. ExPASy Swiss-Prot
Match: Q8LBI1 (60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=RPL5A PE=1 SV=2)

HSP 1 Score: 471.5 bits (1212), Expect = 7.5e-132
Identity = 240/311 (77.17%), Postives = 270/311 (86.82%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           M F K+ K+ AYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFV+RF     
Sbjct: 1   MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                +NKDI AQI+S+SIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           K LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGL
Sbjct: 121 KMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           D+PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+
Sbjct: 181 DIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGV 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           +A++IEEL KKVH+AIR++P  KK  K  PK+HKRYNLKKLTYEERK KL+ER+ ALN A
Sbjct: 241 EAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGA 300

Query: 301 AGADDDEDDEE 312
            G DDDEDDEE
Sbjct: 301 GGDDDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. ExPASy Swiss-Prot
Match: A2WXX3 (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 SV=2)

HSP 1 Score: 459.5 bits (1181), Expect = 3.0e-128
Identity = 229/309 (74.11%), Postives = 267/309 (86.41%), Query Frame = 0


Query: 3   FAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLL 62
           F K QKT AY+KR+QVKF+RRR GKTDYRARIRL NQDKNKYNTPKYRFV+RF       
Sbjct: 4   FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRF------- 63

Query: 63  SSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKK 122
              +NKDITAQI+ ++IAGD+V+A+AYSHELP YGLEVGLTNYAAAYCTGLLLARRVLK 
Sbjct: 64  ---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKL 123

Query: 123 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 182
             +D EYEGN+E TGEDY VEP D RRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 124 RGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 183

Query: 183 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 242
           PHS KRFAGF KD K+LD+++HRKYI+GGHVA YMR++ E+EPEK+Q+ FSEY+KKGIDA
Sbjct: 184 PHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDA 243

Query: 243 DNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 302
           D +E L KKVH+AIR++P + K  K+ P  HKRYNLKKLTYE+RKA LVERLNALNS+AG
Sbjct: 244 DGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAG 302

Query: 303 ADDDEDDEE 312
           ADDD+++E+
Sbjct: 304 ADDDDEEED 302

[Close]

BLAST of CmaCh12G000860 vs. ExPASy Swiss-Prot
Match: Q0JGY1 (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=2 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 8.6e-128
Identity = 229/309 (74.11%), Postives = 266/309 (86.08%), Query Frame = 0


Query: 3   FAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSLL 62
           F K QKT AY KR+QVKF+RRR GKTDYRARIRL NQDKNKYNTPKYRFV+RF       
Sbjct: 4   FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRF------- 63

Query: 63  SSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKK 122
              +NKDITAQI+ ++IAGD+V+A+AYSHELP YGLEVGLTNYAAAYCTGLLLARRVLK 
Sbjct: 64  ---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKL 123

Query: 123 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 182
             +D EYEGN+E TGEDY VEP D RRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 124 RGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 183

Query: 183 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 242
           PHS KRFAGF KD K+LD+++HRKYI+GGHVA YMR++ E+EPEK+Q+ FSEY+KKGIDA
Sbjct: 184 PHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDA 243

Query: 243 DNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 302
           D +E L KKVH+AIR++P + K  K+ P  HKRYNLKKLTYE+RKA LVERLNALNS+AG
Sbjct: 244 DGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAG 302

Query: 303 ADDDEDDEE 312
           ADDD+++E+
Sbjct: 304 ADDDDEEED 302

[Close]

BLAST of CmaCh12G000860 vs. ExPASy TrEMBL
Match: A0A6J1KRC2 (60S ribosomal protein L5-like OS=Cucurbita maxima OX=3661 GN=LOC111496513 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.0e-160
Identity = 301/311 (96.78%), Postives = 301/311 (96.78%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF     
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL
Sbjct: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI
Sbjct: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA
Sbjct: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300

Query: 301 AGADDDEDDEE 312
           AGADDDEDDEE
Sbjct: 301 AGADDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. ExPASy TrEMBL
Match: A0A6J1GH83 (60S ribosomal protein L5-like OS=Cucurbita moschata OX=3662 GN=LOC111454170 PE=3 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.8e-160
Identity = 300/311 (96.46%), Postives = 301/311 (96.78%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF     
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL
Sbjct: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI
Sbjct: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           DADNIEELLKKVHSAIRSEPL+KKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA
Sbjct: 241 DADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300

Query: 301 AGADDDEDDEE 312
           AGADDDEDDEE
Sbjct: 301 AGADDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. ExPASy TrEMBL
Match: A0A5A7VC42 (60S ribosomal protein L5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00440 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 9.8e-151
Identity = 281/311 (90.35%), Postives = 293/311 (94.21%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           MAFAKAQKTKAYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVIRF     
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                +NKDITAQI+SSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----TNKDITAQIVSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           KKLEMDDEYEGNLE TGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL
Sbjct: 121 KKLEMDDEYEGNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           DVPHSVKRFAGFSK + EL+A+VHRKYIFGGHVAAYMRTLMEDEPEKYQ+QFS+YIKKGI
Sbjct: 181 DVPHSVKRFAGFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFSDYIKKGI 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           + DNIEELLKKVHSAIR+EPL K  EKQPPK HKRYNLKKLTYE+RKAKLVERLNALNSA
Sbjct: 241 EPDNIEELLKKVHSAIRAEPLAKTTEKQPPKTHKRYNLKKLTYEQRKAKLVERLNALNSA 300

Query: 301 AGADDDEDDEE 312
           AGADDDEDDEE
Sbjct: 301 AGADDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. ExPASy TrEMBL
Match: A0A1S3BCD6 (60S ribosomal protein L5-like OS=Cucumis melo OX=3656 GN=LOC103488491 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 9.8e-151
Identity = 281/311 (90.35%), Postives = 293/311 (94.21%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           MAFAKAQKTKAYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYRFVIRF     
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVIRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                +NKDITAQI+SSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----TNKDITAQIVSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           KKLEMDDEYEGNLE TGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL
Sbjct: 121 KKLEMDDEYEGNLEATGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           DVPHSVKRFAGFSK + EL+A+VHRKYIFGGHVAAYMRTLMEDEPEKYQ+QFS+YIKKGI
Sbjct: 181 DVPHSVKRFAGFSKGNNELNADVHRKYIFGGHVAAYMRTLMEDEPEKYQTQFSDYIKKGI 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           + DNIEELLKKVHSAIR+EPL K  EKQPPK HKRYNLKKLTYE+RKAKLVERLNALNSA
Sbjct: 241 EPDNIEELLKKVHSAIRAEPLAKTTEKQPPKTHKRYNLKKLTYEQRKAKLVERLNALNSA 300

Query: 301 AGADDDEDDEE 312
           AGADDDEDDEE
Sbjct: 301 AGADDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. ExPASy TrEMBL
Match: A0A6J1BRE1 (60S ribosomal protein L5-like OS=Momordica charantia OX=3673 GN=LOC111004895 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 6.3e-150
Identity = 278/311 (89.39%), Postives = 295/311 (94.86%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           MAFAKAQKTKAYFKRYQVK++RRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF     
Sbjct: 1   MAFAKAQKTKAYFKRYQVKYKRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                +NKDITAQI+SSSIAGDMVLA+AYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----TNKDITAQIVSSSIAGDMVLAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           K LEMD EYEGNLEVTGED+SVEPTD+RRPFRALLDVGLVRTTTGNRVFGALKGALDGGL
Sbjct: 121 KSLEMDKEYEGNLEVTGEDFSVEPTDNRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           DVPHSVKRFAGFSKD+KELDAEVHRKYIFGGHVAAYMR+LMEDEPEKYQS FS+YIKKGI
Sbjct: 181 DVPHSVKRFAGFSKDNKELDAEVHRKYIFGGHVAAYMRSLMEDEPEKYQSHFSDYIKKGI 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           + DNIEELLKKVH+AIRSEPL+KK EKQPPK+HKR+NLKKLTYEERKAKLVERLNALNSA
Sbjct: 241 EPDNIEELLKKVHAAIRSEPLVKKTEKQPPKEHKRFNLKKLTYEERKAKLVERLNALNSA 300

Query: 301 AGADDDEDDEE 312
           AGADDD+ D+E
Sbjct: 301 AGADDDDXDDE 301

[Close]

BLAST of CmaCh12G000860 vs. NCBI nr
Match: KAG7020150.1 (60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 590.5 bits (1521), Expect = 8.5e-165
Identity = 305/310 (98.39%), Postives = 310/310 (100.00%), Query Frame = 0


Query: 2   AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 61
           AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL
Sbjct: 26  AFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCSL 85

Query: 62  LSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 121
           L+SASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK
Sbjct: 86  LNSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLK 145

Query: 122 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 181
           KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD
Sbjct: 146 KLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLD 205

Query: 182 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 241
           VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID
Sbjct: 206 VPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGID 265

Query: 242 ADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 301
           ADNIEELLKKVHSAIRSEPL+KKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA
Sbjct: 266 ADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAA 325

Query: 302 GADDDEDDEE 312
           GADDDED+++
Sbjct: 326 GADDDEDEDD 335

[Close]

BLAST of CmaCh12G000860 vs. NCBI nr
Match: XP_023002749.1 (60S ribosomal protein L5-like [Cucurbita maxima])

HSP 1 Score: 574.3 bits (1479), Expect = 6.3e-160
Identity = 301/311 (96.78%), Postives = 301/311 (96.78%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF     
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL
Sbjct: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI
Sbjct: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA
Sbjct: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300

Query: 301 AGADDDEDDEE 312
           AGADDDEDDEE
Sbjct: 301 AGADDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. NCBI nr
Match: XP_022951292.1 (60S ribosomal protein L5-like [Cucurbita moschata])

HSP 1 Score: 573.2 bits (1476), Expect = 1.4e-159
Identity = 300/311 (96.46%), Postives = 301/311 (96.78%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF     
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----SNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL
Sbjct: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI
Sbjct: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           DADNIEELLKKVHSAIRSEPL+KKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA
Sbjct: 241 DADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300

Query: 301 AGADDDEDDEE 312
           AGADDDEDDEE
Sbjct: 301 AGADDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. NCBI nr
Match: XP_023538585.1 (60S ribosomal protein L5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 572.8 bits (1475), Expect = 1.8e-159
Identity = 299/311 (96.14%), Postives = 301/311 (96.78%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF     
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                SNKDITAQILSSSIAGDMVLASAYSH+LPHYGLEVGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----SNKDITAQILSSSIAGDMVLASAYSHDLPHYGLEVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL
Sbjct: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGH+AAYMRTLMEDEPEKYQSQFSEYIKKGI
Sbjct: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHIAAYMRTLMEDEPEKYQSQFSEYIKKGI 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA
Sbjct: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300

Query: 301 AGADDDEDDEE 312
           AGADDDEDDEE
Sbjct: 301 AGADDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. NCBI nr
Match: KAG6585230.1 (60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 571.6 bits (1472), Expect = 4.1e-159
Identity = 299/311 (96.14%), Postives = 301/311 (96.78%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF     
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                SNKDITAQILSSSIAGDMVLASAYSHELPH+GLEVGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----SNKDITAQILSSSIAGDMVLASAYSHELPHFGLEVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL
Sbjct: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI
Sbjct: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           DADNIEELLKKVHSAIRSEPL+KKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA
Sbjct: 241 DADNIEELLKKVHSAIRSEPLVKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300

Query: 301 AGADDDEDDEE 312
           AGADDDEDDEE
Sbjct: 301 AGADDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. TAIR 10
Match: AT5G39740.1 (ribosomal protein L5 B )

HSP 1 Score: 475.3 bits (1222), Expect = 3.7e-134
Identity = 241/311 (77.49%), Postives = 271/311 (87.14%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           M F K+ K+ AYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFV+RF     
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                +NKDI AQI+S+SIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           K LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGL
Sbjct: 121 KMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           D+PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+
Sbjct: 181 DIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGV 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           +A++IEE+ KKVH+AIR+EP  KK EK  PK+HKRYNLKKLTYEERK KL+ER+ ALN A
Sbjct: 241 EAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGA 300

Query: 301 AGADDDEDDEE 312
            G DDDEDDEE
Sbjct: 301 GGDDDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. TAIR 10
Match: AT5G39740.2 (ribosomal protein L5 B )

HSP 1 Score: 475.3 bits (1222), Expect = 3.7e-134
Identity = 241/311 (77.49%), Postives = 271/311 (87.14%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           M F K+ K+ AYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFV+RF     
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                +NKDI AQI+S+SIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           K LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGL
Sbjct: 121 KMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           D+PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+
Sbjct: 181 DIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGV 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           +A++IEE+ KKVH+AIR+EP  KK EK  PK+HKRYNLKKLTYEERK KL+ER+ ALN A
Sbjct: 241 EAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGA 300

Query: 301 AGADDDEDDEE 312
            G DDDEDDEE
Sbjct: 301 GGDDDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. TAIR 10
Match: AT3G25520.1 (ribosomal protein L5 )

HSP 1 Score: 471.5 bits (1212), Expect = 5.3e-133
Identity = 240/311 (77.17%), Postives = 270/311 (86.82%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVIRFVSSCS 60
           M F K+ K+ AYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFV+RF     
Sbjct: 1   MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRF----- 60

Query: 61  LLSSASNKDITAQILSSSIAGDMVLASAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVL 120
                +NKDI AQI+S+SIAGD+V ASAY+HELP YGL VGLTNYAAAYCTGLLLARRVL
Sbjct: 61  -----TNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVL 120

Query: 121 KKLEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGL 180
           K LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGL
Sbjct: 121 KMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGL 180

Query: 181 DVPHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGI 240
           D+PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG+
Sbjct: 181 DIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGV 240

Query: 241 DADNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSA 300
           +A++IEEL KKVH+AIR++P  KK  K  PK+HKRYNLKKLTYEERK KL+ER+ ALN A
Sbjct: 241 EAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGA 300

Query: 301 AGADDDEDDEE 312
            G DDDEDDEE
Sbjct: 301 GGDDDDEDDEE 301

[Close]

BLAST of CmaCh12G000860 vs. TAIR 10
Match: AT3G25520.2 (ribosomal protein L5 )

HSP 1 Score: 295.0 bits (754), Expect = 6.8e-80
Identity = 145/189 (76.72%), Postives = 167/189 (88.36%), Query Frame = 0


Query: 123 LEMDDEYEGNLEVTGEDYSVEPTDSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDV 182
           LEMDDEYEGN+E TGED+SVEPTDSRRPFRALLDVGL+RTTTGNRVFGALKGALDGGLD+
Sbjct: 2   LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 61

Query: 183 PHSVKRFAGFSKDSKELDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSQFSEYIKKGIDA 242
           PHS KRFAGF K++K+LDAE+HR YI+GGHV+ YM+ L EDEPEK Q+ FS YIKKG++A
Sbjct: 62  PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 121

Query: 243 DNIEELLKKVHSAIRSEPLLKKVEKQPPKKHKRYNLKKLTYEERKAKLVERLNALNSAAG 302
           ++IEEL KKVH+AIR++P  KK  K  PK+HKRYNLKKLTYEERK KL+ER+ ALN A G
Sbjct: 122 ESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGG 181

Query: 303 ADDDEDDEE 312
            DDDEDDEE
Sbjct: 182 DDDDEDDEE 190

The following BLAST results are available for this feature:

BLAST of CmaCh12G000860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6UNT2	1.3e-139	81.35	60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1	[more]
P49227	5.2e-133	77.49	60S ribosomal protein L5-2 OS=Arabidopsis thaliana OX=3702 GN=RPL5B PE=2 SV=3	[more]
Q8LBI1	7.5e-132	77.17	60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=RPL5A PE=1 SV=2	[more]
A2WXX3	3.0e-128	74.11	60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 ...	[more]
Q0JGY1	8.6e-128	74.11	60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=...	[more]

BLAST of CmaCh12G000860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KRC2	3.0e-160	96.78	60S ribosomal protein L5-like OS=Cucurbita maxima OX=3661 GN=LOC111496513 PE=3 S...	[more]
A0A6J1GH83	6.8e-160	96.46	60S ribosomal protein L5-like OS=Cucurbita moschata OX=3662 GN=LOC111454170 PE=3...	[more]
A0A5A7VC42	9.8e-151	90.35	60S ribosomal protein L5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BCD6	9.8e-151	90.35	60S ribosomal protein L5-like OS=Cucumis melo OX=3656 GN=LOC103488491 PE=3 SV=1	[more]
A0A6J1BRE1	6.3e-150	89.39	60S ribosomal protein L5-like OS=Momordica charantia OX=3673 GN=LOC111004895 PE=...	[more]

BLAST of CmaCh12G000860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020150.1	8.5e-165	98.39	60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023002749.1	6.3e-160	96.78	60S ribosomal protein L5-like [Cucurbita maxima]	[more]
XP_022951292.1	1.4e-159	96.46	60S ribosomal protein L5-like [Cucurbita moschata]	[more]
XP_023538585.1	1.8e-159	96.14	60S ribosomal protein L5-like [Cucurbita pepo subsp. pepo]	[more]
KAG6585230.1	4.1e-159	96.14	60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh12G000860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39740.1	3.7e-134	77.49	ribosomal protein L5 B	[more]
AT5G39740.2	3.7e-134	77.49	ribosomal protein L5 B	[more]
AT3G25520.1	5.3e-133	77.17	ribosomal protein L5	[more]
AT3G25520.2	6.8e-80	76.72	ribosomal protein L5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 280..300
None	No IPR available	GENE3D	3.30.420.100		coord: 1..301 e-value: 5.2E-140 score: 468.1
None	No IPR available	PANTHER	PTHR23410:SF28	SUBFAMILY NOT NAMED	coord: 1..309
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 41..180 e-value: 1.55132E-22 score: 87.9807
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 11..261
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PRINTS	PR00058	RIBOSOMALL5	coord: 20..39 score: 74.06 coord: 174..193 score: 66.88 coord: 216..236 score: 52.98 coord: 43..62 score: 48.75 coord: 154..173 score: 77.19
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PFAM	PF17144	Ribosomal_L5e	coord: 14..185 e-value: 1.4E-76 score: 256.0
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PANTHER	PTHR23410	RIBOSOMAL PROTEIN L5-RELATED	coord: 1..309
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	HAMAP	MF_01337_A	Ribosomal_L18_A	coord: 14..256 score: 19.035315
IPR025607	Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal	PFAM	PF14204	Ribosomal_L18_c	coord: 201..291 e-value: 1.4E-34 score: 118.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G000860.1	CmaCh12G000860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome