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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGTTGTCTTCAAATTCTATTAGGAGGCCTTGTAATCACCATCACAACATTGAGCCTCTTCAAGTTCTACTCAGCTGGGTTTATCTTCCACAAGGAGGACGTTTGCCGCTACTTCTACACCACGACGACAACAAAACAAATATACGAGGCAAGCTTCGATGCGAAAGCATTGTCGGATCGAGTCGAAGAAGTGCTAGATCAACTAGAAAGCTTGCAAGATAAACTCGAATCGGTGGTCGAGGAAATGGAAAGGGACAAGCAAGCATTGAGCAATGGTAATATGAGAAGAATTGAGCATAAAAAGTACTTGGAAATGGAAGTGATTAAGCCTCTTTATAATGCTCACATTGGGCTGAGACAAATTAGATTACCCAAAGTTGAAAAAATGAATGAAAATTCGAGTATGAAAGAGGAGCCTTTGATCAATAATTTTGTGGTTGAGGAGATAAGAAAGTATATTACTCCAAAGAAGAGTAGAACGGGGAAGGTGAATATGTATATGACTGAGAGTATATACAACACAATTGGACATGCTTGTGTGTTGGTTAGGAAGGAATTGGAAGAGTATATGAGTTATGACATTGGTTCTTATTGTAAAGATGATTGGAACATGGGTCAGAAACTAATGCTGAATGGCTGCGATCCGTTGCCCCGTCGACGGTGCCTGACGAGAGCGTCGAAGGTGTACCAAAAGCCGTATCCGGTGAACGAATCGCTATGGAAAACGCCCGACGATCGGAATGTAAGATGGAGTAACTATCAATGTAGGAACTTTTCATGCTTGTCAAGCAAGAATCCCAAGAGGGGGTACAACAAGTGTAGTGGTTGCTTTGAAATGGAGAAGGAGAAGGTTAAATGGGTGAGGAATAGTTCGGTTGCGGTGGATTTTAGGATATCGGACGTGTTGGGGATGAAGGCGGGGGAGATTCGGGTCGGGTTGGATTTCGGTATAAGCACGGGGAGTTTTGGTGCAAGAATGAGAGAAGAAAATGTGACAATTGTAACGACAGCTTTGAACCTTGGAGCTCCTTTCAATGAGTTTATTGCTTTAAGAGGGTTGATTCCTTTGTATGTGACACTAAACCAACGGCTTCCTTTGTTTGATAACACAATGGACTTGATTCACACAACTGGTTTCATGGATGGTTGGGTGGACATGCTGCTGCTGGATTTCATTCTTTTCGATTGGGATCGGGTTCTACGCCCGGGAGGATTGCTATGGATCGACCGATTCTTTTGCGATCGGAAGGATCTCGACGACTATATCTACATGTTTCTGCAGTTTAGATACAAGAAACATAAATGGGCTATTGCTCCTAAGTCAAAAAATGAAGTCTACCTATCTGCAGTCTTGGAAAAACCTCCCAGAGCAATATGA mRNA sequence ATGGGTTGTCTTCAAATTCTATTAGGAGGCCTTGTAATCACCATCACAACATTGAGCCTCTTCAAGTTCTACTCAGCTGGGTTTATCTTCCACAAGGAGGACGTTTGCCGCTACTTCTACACCACGACGACAACAAAACAAATATACGAGGCAAGCTTCGATGCGAAAGCATTGTCGGATCGAGTCGAAGAAGTGCTAGATCAACTAGAAAGCTTGCAAGATAAACTCGAATCGGTGGTCGAGGAAATGGAAAGGGACAAGCAAGCATTGAGCAATGGTAATATGAGAAGAATTGAGCATAAAAAGTACTTGGAAATGGAAGTGATTAAGCCTCTTTATAATGCTCACATTGGGCTGAGACAAATTAGATTACCCAAAGTTGAAAAAATGAATGAAAATTCGAGTATGAAAGAGGAGCCTTTGATCAATAATTTTGTGGTTGAGGAGATAAGAAAGTATATTACTCCAAAGAAGAGTAGAACGGGGAAGGTGAATATGTATATGACTGAGAGTATATACAACACAATTGGACATGCTTGTGTGTTGGTTAGGAAGGAATTGGAAGAGTATATGAGTTATGACATTGGTTCTTATTGTAAAGATGATTGGAACATGGGTCAGAAACTAATGCTGAATGGCTGCGATCCGTTGCCCCGTCGACGGTGCCTGACGAGAGCGTCGAAGGTGTACCAAAAGCCGTATCCGGTGAACGAATCGCTATGGAAAACGCCCGACGATCGGAATGTAAGATGGAGTAACTATCAATGTAGGAACTTTTCATGCTTGTCAAGCAAGAATCCCAAGAGGGGGTACAACAAGTGTAGTGGTTGCTTTGAAATGGAGAAGGAGAAGGTTAAATGGGTGAGGAATAGTTCGGTTGCGGTGGATTTTAGGATATCGGACGTGTTGGGGATGAAGGCGGGGGAGATTCGGGTCGGGTTGGATTTCGGTATAAGCACGGGGAGTTTTGGTGCAAGAATGAGAGAAGAAAATGTGACAATTGTAACGACAGCTTTGAACCTTGGAGCTCCTTTCAATGAGTTTATTGCTTTAAGAGGGTTGATTCCTTTGTATGTGACACTAAACCAACGGCTTCCTTTGTTTGATAACACAATGGACTTGATTCACACAACTGGTTTCATGGATGGTTGGGTGGACATGCTGCTGCTGGATTTCATTCTTTTCGATTGGGATCGGGTTCTACGCCCGGGAGGATTGCTATGGATCGACCGATTCTTTTGCGATCGGAAGGATCTCGACGACTATATCTACATGTTTCTGCAGTTTAGATACAAGAAACATAAATGGGCTATTGCTCCTAAGTCAAAAAATGAAGTCTACCTATCTGCAGTCTTGGAAAAACCTCCCAGAGCAATATGA Coding sequence (CDS) ATGGGTTGTCTTCAAATTCTATTAGGAGGCCTTGTAATCACCATCACAACATTGAGCCTCTTCAAGTTCTACTCAGCTGGGTTTATCTTCCACAAGGAGGACGTTTGCCGCTACTTCTACACCACGACGACAACAAAACAAATATACGAGGCAAGCTTCGATGCGAAAGCATTGTCGGATCGAGTCGAAGAAGTGCTAGATCAACTAGAAAGCTTGCAAGATAAACTCGAATCGGTGGTCGAGGAAATGGAAAGGGACAAGCAAGCATTGAGCAATGGTAATATGAGAAGAATTGAGCATAAAAAGTACTTGGAAATGGAAGTGATTAAGCCTCTTTATAATGCTCACATTGGGCTGAGACAAATTAGATTACCCAAAGTTGAAAAAATGAATGAAAATTCGAGTATGAAAGAGGAGCCTTTGATCAATAATTTTGTGGTTGAGGAGATAAGAAAGTATATTACTCCAAAGAAGAGTAGAACGGGGAAGGTGAATATGTATATGACTGAGAGTATATACAACACAATTGGACATGCTTGTGTGTTGGTTAGGAAGGAATTGGAAGAGTATATGAGTTATGACATTGGTTCTTATTGTAAAGATGATTGGAACATGGGTCAGAAACTAATGCTGAATGGCTGCGATCCGTTGCCCCGTCGACGGTGCCTGACGAGAGCGTCGAAGGTGTACCAAAAGCCGTATCCGGTGAACGAATCGCTATGGAAAACGCCCGACGATCGGAATGTAAGATGGAGTAACTATCAATGTAGGAACTTTTCATGCTTGTCAAGCAAGAATCCCAAGAGGGGGTACAACAAGTGTAGTGGTTGCTTTGAAATGGAGAAGGAGAAGGTTAAATGGGTGAGGAATAGTTCGGTTGCGGTGGATTTTAGGATATCGGACGTGTTGGGGATGAAGGCGGGGGAGATTCGGGTCGGGTTGGATTTCGGTATAAGCACGGGGAGTTTTGGTGCAAGAATGAGAGAAGAAAATGTGACAATTGTAACGACAGCTTTGAACCTTGGAGCTCCTTTCAATGAGTTTATTGCTTTAAGAGGGTTGATTCCTTTGTATGTGACACTAAACCAACGGCTTCCTTTGTTTGATAACACAATGGACTTGATTCACACAACTGGTTTCATGGATGGTTGGGTGGACATGCTGCTGCTGGATTTCATTCTTTTCGATTGGGATCGGGTTCTACGCCCGGGAGGATTGCTATGGATCGACCGATTCTTTTGCGATCGGAAGGATCTCGACGACTATATCTACATGTTTCTGCAGTTTAGATACAAGAAACATAAATGGGCTATTGCTCCTAAGTCAAAAAATGAAGTCTACCTATCTGCAGTCTTGGAAAAACCTCCCAGAGCAATATGA Protein sequence MGCLQILLGGLVITITTLSLFKFYSAGFIFHKEDVCRYFYTTTTTKQIYEASFDAKALSDRVEEVLDQLESLQDKLESVVEEMERDKQALSNGNMRRIEHKKYLEMEVIKPLYNAHIGLRQIRLPKVEKMNENSSMKEEPLINNFVVEEIRKYITPKKSRTGKVNMYMTESIYNTIGHACVLVRKELEEYMSYDIGSYCKDDWNMGQKLMLNGCDPLPRRRCLTRASKVYQKPYPVNESLWKTPDDRNVRWSNYQCRNFSCLSSKNPKRGYNKCSGCFEMEKEKVKWVRNSSVAVDFRISDVLGMKAGEIRVGLDFGISTGSFGARMREENVTIVTTALNLGAPFNEFIALRGLIPLYVTLNQRLPLFDNTMDLIHTTGFMDGWVDMLLLDFILFDWDRVLRPGGLLWIDRFFCDRKDLDDYIYMFLQFRYKKHKWAIAPKSKNEVYLSAVLEKPPRAI
Homology
BLAST of CmaCh11G011320 vs. ExPASy Swiss-Prot
Match: Q8RWB7 (Probable methyltransferase At1g29790 OS=Arabidopsis thaliana OX=3702 GN=CLSC5 PE=2 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 3.9e-52 Identity = 116/287 (40.42%), Postives = 171/287 (59.58%), Query Frame = 0 Query: 176 IGHACVLVRKELEEYMSYDIGSYCKDDWNMGQKLMLNGCDPLPRRRCLTRASKVYQKPYP 235 I AC L EYM+Y S C D ++ +KL+L GC PLPRRRC +R P Sbjct: 105 IASACHNYPDLLHEYMNYTPFSLCPSDTDLVEKLILRGCHPLPRRRCFSRT--------P 164
Query: 236 VNESLWKTPDDRNVRWSNYQCRNFSCLSSKNPKRGYNKCSGCFEMEKEKVKWVRNSSVAV 295 N S + + NV WS Y C++F CL +K G++ +EK K ++ S + Sbjct: 165 RNPS--DSKPESNVLWSYYSCKSFDCLITKFSDLGFD-----LSLEKSKSQFSAYKS-EL 224
Query: 296 DFRISDVLGMKAGE---IRVGLDFGISTGSFGARMREENVTIVTTALNLGAPFNEFIALR 355 D IS +L + +R+G+D G TGSF A M+ NVT++TT +N AP++E +A+R Sbjct: 225 DLPISQLLQIAKSANSVLRLGIDVGGGTGSFAAAMKARNVTVLTTTMNFNAPYSEAVAMR 284
Query: 356 GLIPLYVTLNQRLPLFDNTMDLIHTTGFMDGWVDMLLLDFILFDWDRVLRPGGLLWIDRF 415 GL+PL+V L QRLP+FD +DL+ ++ W+ + +++F FD DR+LR GG LW+DRF Sbjct: 285 GLVPLHVPLQQRLPVFDGVVDLVRCGRAVNRWIPVTVMEFFFFDLDRILRGGGYLWLDRF 344
Query: 416 FCDRKDLDD-YIYMFLQFRYKKHKWAIAPKSKN---EVYLSAVLEKP 456 F + DL++ Y M + YKK KWA+A K+ + EV+L+A+L+KP Sbjct: 345 FSKKVDLENVYAPMIGKLGYKKVKWAVANKADSKHGEVFLTALLQKP 375
BLAST of CmaCh11G011320 vs. TAIR 10
Match: AT3G05390.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G01240.1); Has 507 Blast hits to 498 proteins in 33 species: Archae - 4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 678.7 bits (1750), Expect = 3.2e-195 Identity = 322/459 (70.15%), Postives = 384/459 (83.66%), Query Frame = 0 Query: 1 MGCLQILLGGLVITITTLSLFKFYSAGFIFHKEDVCRYFYTTTTTKQIYEASFDAKALSD 60 M LQ++LG LVIT++ L++F+S G+ ED C Y T K++ FD KAL D Sbjct: 15 MAGLQVILGLLVITVSLSCLYRFHSVGYFLQNEDTCNNIY---TIKEVSSEGFDLKALHD 74
Query: 61 RVEEVLDQLESLQDKLESVVEEMERDKQALSNGNMRRIEHKKYLEMEVIKPLYNAHIGLR 120 RV+EVL+++++L +KLE V++ME+ K + E KK+LE EV+KP Y AHIGLR Sbjct: 75 RVDEVLEKMDNLYEKLEKTVKDMEKSKDG------SKKEMKKFLEDEVMKPFYYAHIGLR 134
Query: 121 QIRLPKVEKMNENSSMKEEPLINNFVVEEIRKYITPKKSRTGKVNMYMTESIYNTIGHAC 180 QIRLPK E + NS+ KEEPLIN F++EEIR+YITPK++R GK+NM+ TE +YNTIGHAC Sbjct: 135 QIRLPKPEGI-RNSTEKEEPLINKFLIEEIRQYITPKENRVGKINMFGTERVYNTIGHAC 194
Query: 181 VLVRKELEEYMSYDIGSYCKDDWNMGQKLMLNGCDPLPRRRCLTRASKVYQKPYPVNESL 240 L++ ELE+YM YD+G+YC DDWN+ QKLMLNGCDPLPRRRCLTRAS YQKPYP+NESL Sbjct: 195 ALMKMELEKYMDYDVGAYCDDDWNLAQKLMLNGCDPLPRRRCLTRASMTYQKPYPINESL 254
Query: 241 WKTPDDRNVRWSNYQCRNFSCLSSKNPKRGYNKCSGCFEMEKEKVKWVRNSSVAVDFRIS 300 WK PDDRNVRW NYQCRNF+CLSSKNPKRGY KCSGCFEMEKEK KWV+NSS+ VDF I Sbjct: 255 WKLPDDRNVRWGNYQCRNFACLSSKNPKRGYTKCSGCFEMEKEKDKWVKNSSLLVDFMIE 314
Query: 301 DVLGMKAGEIRVGLDFGISTGSFGARMREENVTIVTTALNLGAPFNEFIALRGLIPLYVT 360 DVL +K EIR+GLD+G+ TG+F ARMRE+NVTIVTTALNLGAPFNE IALRGLIPLY++ Sbjct: 315 DVLRVKPSEIRIGLDYGVGTGTFAARMREKNVTIVTTALNLGAPFNEMIALRGLIPLYIS 374
Query: 361 LNQRLPLFDNTMDLIHTTGFMDGWVDMLLLDFILFDWDRVLRPGGLLWIDRFFCDRKDLD 420 LNQRLP FDNTMD+IHTTG MDGW+D+LL+DF+L+DWDRVLRPGGLLWIDRFFC +KDLD Sbjct: 375 LNQRLPFFDNTMDMIHTTGLMDGWIDLLLMDFVLYDWDRVLRPGGLLWIDRFFCKKKDLD 434
Query: 421 DYIYMFLQFRYKKHKWAIAPKSKNEVYLSAVLEKPPRAI 460 DY+YMFLQFRYKKHKWAI+PKSK+EVYLSA+LEKPPRAI Sbjct: 435 DYMYMFLQFRYKKHKWAISPKSKDEVYLSALLEKPPRAI 463
BLAST of CmaCh11G011320 vs. TAIR 10
Match: AT4G01240.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 415.2 bits (1066), Expect = 6.7e-116 Identity = 204/433 (47.11%), Postives = 281/433 (64.90%), Query Frame = 0 Query: 49 YEASFD------AKALSDRVEEVLDQLESLQDKLESVVEEMERDKQALSNGNMRRIEHKK 108 Y SFD + +E + ++ D L+++ ++S+ + H Sbjct: 234 YHGSFDGDNYNIGSQMRKTIETAIFKIHQEMDDLKALEANSSTPPSSVSSASGSMFRHVA 293
Query: 109 YLEMEVIKPLYNAHIGLRQIRLPKVEKMNENSSMKEEPLI-------NNFVVEEIRKYIT 168 +L +V+ + + H+ L E S+ + PL +F+ EEI+KYI Sbjct: 294 FL-ADVLSLVQSVHMELPSF---------EERSVADHPLKQQKGDPGEHFMREEIKKYIK 353
Query: 169 PKKSRTGKVNMYMTESIYNTIGHACVLVRKELEEYMSYDIGSYCKDDWNMGQKLMLNGCD 228 K +R GK N + +IGHAC ++K+LEEYM YD+G C DDW + QKLM++GCD Sbjct: 354 IKPNRLGKQNFMGANGTFTSIGHACFAMKKDLEEYMDYDVGEICNDDWRLAQKLMVHGCD 413
Query: 229 PLPRRRCLTRASKVYQKPYPVNESLWKTPDDRNVRWSNYQCRNFSCLSSK-NPKRGYNKC 288 PLPRRRC +R ++Y KP+P+NESLWK PD+RNVRW Y+C+NF+CL+S ++G+ KC Sbjct: 414 PLPRRRCFSRGPQLYHKPFPINESLWKLPDNRNVRWGQYKCKNFACLASNTTARKGFFKC 473
Query: 289 SGCFEM-EKEKVKWVRNSSV------AVDFRISDVLGMKAGEIRVGLDFGISTGSFGARM 348 + CF + E +W+ + DF I++VL +K GEIR+GLDF I TG+F ARM Sbjct: 474 TDCFNLTHHESPRWLNRGEIDPETNQTADFSIAEVLEIKPGEIRIGLDFSIGTGTFAARM 533
Query: 349 REENVTIVTTALNLGAPFNEFIALRGLIPLYVTLNQRLPLFDNTMDLIHTTGFMDGWVDM 408 RE+NVTIV+ +NLGAPFNE IALRGL+PLY+T+NQRLP FD+T+D+IHTT F+DGW+D+ Sbjct: 534 REQNVTIVSATINLGAPFNEMIALRGLVPLYLTVNQRLPFFDSTLDMIHTTRFLDGWIDL 593
Query: 409 LLLDFILFDWDRVLRPGGLLWIDRFFCDRKDLDDYIYMFLQFRYKKHKWAIAP---KSKN 458 +LLDF+LFDWDRVLRPGGLLWID FFC ++D+ DY+ F RY+KHKW + P K Sbjct: 594 ILLDFVLFDWDRVLRPGGLLWIDGFFCLKEDVSDYMEAFKALRYRKHKWVVVPKKDKDDK 653
BLAST of CmaCh11G011320 vs. TAIR 10
Match: AT3G27230.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 257.7 bits (657), Expect = 1.8e-68 Identity = 131/314 (41.72%), Postives = 195/314 (62.10%), Query Frame = 0 Query: 146 VVEEIRKYITPKKSRTGKVNMYMTESIYNTIGHACVLVRKELEEYMSYDIGSYCKDDWNM 205 +V E++ ++ + GK + + +++GH+C L +YMSY + C DDW++ Sbjct: 102 IVPELKLFLQRHQLPLGKDSRTGITEMVSSVGHSCGKSTDLLSQYMSYKVFDRCPDDWSL 161
Query: 206 GQKLMLNGCDPLPRRRCLTRASKVYQKPYPVNESLWKTPDDRNVRWSNYQCRNFSCLSSK 265 GQKL+L C+PLPRRRCL + + Q +SLW++ +++V WS C++F CL K Sbjct: 162 GQKLILRACEPLPRRRCLAKTVQ-KQDLSKSPDSLWRSVSNKSVNWSGLGCKSFDCLKGK 221
Query: 266 NPKRGYNKCSGCFEMEKEKVKWVRNSSVAVDFRISDVLGMKAGEIRVGLDFGISTGSFGA 325 + +C GCF++ EK ++V+ DF I DVLG+ +G+IR+G D +G+F A Sbjct: 222 KLSK---ECVGCFDLGVEKDRFVKVKG-KNDFLIDDVLGLGSGKIRIGFDISGGSGTFAA 281
Query: 326 RMREENVTIVTTALNLGAPFNEFIALRGLIPLYVTLNQRLPLFDNTMDLIHTTGFMDGWV 385 RM E+NVT++T LN GAPF+EFIA RGL PL+++L+ R P DN DLIH + +D Sbjct: 282 RMAEKNVTVITNTLNNGAPFSEFIAARGLFPLFLSLDHRFPFLDNVFDLIHASSGLDVEG 341
Query: 386 DMLLLDFILFDWDRVLRPGGLLWIDRFFC-DRKDLDDYIYMFLQFRYKKHKWAIAPKSKN 445 L+F++FD DRVL+P GL W+D F+C + + + M +F YKK KW I K+ Sbjct: 342 KAEKLEFLMFDLDRVLKPRGLFWLDNFYCANDEKKKELTRMIERFGYKKLKWVIGEKADA 401
Query: 446 EVYLSAVLEKPPRA 459 +VYLSAVL+KP RA Sbjct: 402 QVYLSAVLQKPVRA 410
BLAST of CmaCh11G011320 vs. TAIR 10
Match: AT5G40830.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 248.4 bits (633), Expect = 1.1e-65 Identity = 135/359 (37.60%), Postives = 212/359 (59.05%), Query Frame = 0 Query: 108 VIKPLYNAHIGLRQIRLPKVEKMNENSSMKEEPLINNFVVEEIRKYITPKKSRTGKVNMY 167 +++ + ++H L Q+ + + + S +E P +E++ ++ + GK + Sbjct: 71 ILREIDSSHHTLTQMEKQIIGYESLDLSQQEVP-------QELKLFLQQHQLPLGKDSRT 130
Query: 168 MTESIYNTIGHACVLVRKELEEYMSYDIGSYCKDDWNMGQKLMLNGCDPLPRRRCLTRAS 227 + ++GH+C + L +YMSY++ C DDW++ QKL+L C+PLPRRRCL + Sbjct: 131 GITQMVASVGHSCEMSLDLLSQYMSYNVFEKCPDDWSLAQKLILRACEPLPRRRCL---A 190
Query: 228 KVYQKP----YPVNESLWKTPDDRNVRWSNYQCRNFSCLSSKNPKRGYNKCSGCFEM--E 287 K KP +P +SLW+ + +V WS C++F CL K R C GCF++ Sbjct: 191 KTVHKPGLALFP--DSLWRPVGNSSVNWSGLGCKSFECLKGKKLSR---DCVGCFDLATS 250
Query: 288 KEKVKWVRNSSVAVDFRISDVLGMKAGEIRVGLDFGISTGSFGARMREENVTIVTTALNL 347 EK ++V+ + DF I DVL + G+IR+G D +G+F ARM E+NV I++ LN+ Sbjct: 251 HEKDRFVKVNG-KTDFLIDDVLDLGDGKIRIGFDISSGSGTFAARMAEKNVNIISNTLNI 310
Query: 348 GAPFNEFIALRGLIPLYVTLNQRLPLFDNTMDLIHTTGFMDGWVDML--LLDFILFDWDR 407 APF+EFIA RG+ PL+++L+QRLP +DN DLIH + +D V L+F++FD DR Sbjct: 311 DAPFSEFIAARGIFPLFMSLDQRLPFYDNVFDLIHASNGLDLAVSNKPEKLEFLMFDLDR 370
Query: 408 VLRPGGLLWIDRFFCDRKDLDDYIYMFLQ-FRYKKHKWAIAPKSKNEVYLSAVLEKPPR 458 +L+PGGL W+D F+C + + ++ F YKK KW + K+ EV+LSAVL+KP R Sbjct: 371 ILKPGGLFWLDNFYCGNDEKKRVLTRLIERFGYKKLKWVVGEKTDAEVFLSAVLQKPAR 413
BLAST of CmaCh11G011320 vs. TAIR 10
Match: AT5G40830.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 248.4 bits (633), Expect = 1.1e-65 Identity = 135/359 (37.60%), Postives = 212/359 (59.05%), Query Frame = 0 Query: 108 VIKPLYNAHIGLRQIRLPKVEKMNENSSMKEEPLINNFVVEEIRKYITPKKSRTGKVNMY 167 +++ + ++H L Q+ + + + S +E P +E++ ++ + GK + Sbjct: 71 ILREIDSSHHTLTQMEKQIIGYESLDLSQQEVP-------QELKLFLQQHQLPLGKDSRT 130
Query: 168 MTESIYNTIGHACVLVRKELEEYMSYDIGSYCKDDWNMGQKLMLNGCDPLPRRRCLTRAS 227 + ++GH+C + L +YMSY++ C DDW++ QKL+L C+PLPRRRCL + Sbjct: 131 GITQMVASVGHSCEMSLDLLSQYMSYNVFEKCPDDWSLAQKLILRACEPLPRRRCL---A 190
Query: 228 KVYQKP----YPVNESLWKTPDDRNVRWSNYQCRNFSCLSSKNPKRGYNKCSGCFEM--E 287 K KP +P +SLW+ + +V WS C++F CL K R C GCF++ Sbjct: 191 KTVHKPGLALFP--DSLWRPVGNSSVNWSGLGCKSFECLKGKKLSR---DCVGCFDLATS 250
Query: 288 KEKVKWVRNSSVAVDFRISDVLGMKAGEIRVGLDFGISTGSFGARMREENVTIVTTALNL 347 EK ++V+ + DF I DVL + G+IR+G D +G+F ARM E+NV I++ LN+ Sbjct: 251 HEKDRFVKVNG-KTDFLIDDVLDLGDGKIRIGFDISSGSGTFAARMAEKNVNIISNTLNI 310
Query: 348 GAPFNEFIALRGLIPLYVTLNQRLPLFDNTMDLIHTTGFMDGWVDML--LLDFILFDWDR 407 APF+EFIA RG+ PL+++L+QRLP +DN DLIH + +D V L+F++FD DR Sbjct: 311 DAPFSEFIAARGIFPLFMSLDQRLPFYDNVFDLIHASNGLDLAVSNKPEKLEFLMFDLDR 370
Query: 408 VLRPGGLLWIDRFFCDRKDLDDYIYMFLQ-FRYKKHKWAIAPKSKNEVYLSAVLEKPPR 458 +L+PGGL W+D F+C + + ++ F YKK KW + K+ EV+LSAVL+KP R Sbjct: 371 ILKPGGLFWLDNFYCGNDEKKRVLTRLIERFGYKKLKWVVGEKTDAEVFLSAVLQKPAR 413
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q8RWB7 | 3.9e-52 | 40.42 | Probable methyltransferase At1g29790 OS=Arabidopsis thaliana OX=3702 GN=CLSC5 PE... | [more] |
Match Name | E-value | Identity | Description | |
AT3G05390.1 | 3.2e-195 | 70.15 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... | [more] |
AT4G01240.1 | 6.7e-116 | 47.11 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | [more] |
AT3G27230.1 | 1.8e-68 | 41.72 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | [more] |
AT5G40830.1 | 1.1e-65 | 37.60 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | [more] |
AT5G40830.2 | 1.1e-65 | 37.60 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | [more] |
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 55..93 |
None | No IPR available | GENE3D | 3.40.50.150 | Vaccinia Virus protein VP39 | coord: 279..450 e-value: 1.6E-5 score: 26.2 |
None | No IPR available | PANTHER | PTHR44067 | S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED | coord: 1..458 |
None | No IPR available | PANTHER | PTHR44067:SF9 | F22F7.17 PROTEIN | coord: 1..458 |
IPR004159 | Putative S-adenosyl-L-methionine-dependent methyltransferase | PFAM | PF03141 | Methyltransf_29 | coord: 279..409 e-value: 1.4E-6 score: 27.2 |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase | SUPERFAMILY | 53335 | S-adenosyl-L-methionine-dependent methyltransferases | coord: 303..427 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0032259 |
methylation |
cellular_component |
GO:0005737 |
cytoplasm |
cellular_component |
GO:0016021 |
integral component of membrane |
cellular_component |
GO:0043231 |
intracellular membrane-bounded organelle |
molecular_function |
GO:0008168 |
methyltransferase activity |
|