CmaCh11G010780 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCGGATAGCAGGAGTCGAAGCAGGAGCAGAAGCAGGAGCCCAGTGGCTCGTAAGATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATCACGTCGGGGTTTCAGGTTTATTATTCTGATAAATTATTTATTTCTCATATCTGATATGTAGGCTGGGTAGAATCTGCAGATGTATGAGTTTTTTTAATGCAGTCATGTTATTTTTGTAATCCATTTCTGGCTGTGGAGCTATCTCCCCCCTGTTTAGATTGGGTATATTTCATTCAACCATCAATTAATATCATTTCTTCTCAATTCATACACAGATACACATGCACACACATGGTCATGGAGTCATATCTCTTATGTTTTAAAGGAATTATATGTAACTATTGCATGATTGTGCTATGCTGGTTCTGAATGTTTTGTCATTGATCAAGTTGACAAATCTCTGCATTAATCATGCTTGAGCAGACATGGAAGTCTCCAATACAGCTGCAATGGATATAATATTCATGTTATACTAATTGTATGGTAGTAGTATTTGATGCTGATGTTTCTGTTTTTTGGCATGATTATTTGTATAAAAAAACGTTGTGGTTTTATCATGGTTTAGTTTTGTCATTTGTGACATGACTTGGTGAAATTCATATTGCAACTTTTCTATTAATGGTTTGTTATAAGATTATAAACTGCTTTCTTCATGGATCCTTTTGTTCTGGCTATGAGCTGGTGAGAAAAGCTGAAGACTTGGGGATATTTTACTGTTCAAGGTCAGAGTGGAGTATTGATTAGTTAGGATAATGTCTGCGTGTTGACTGTGTGTTCACCAGTGTAACTGGGAAAACTTTTGAGTTGTTTACTCCCTAAAACTCCATTTAATATATATATATATATATATATGGGGGATTTACTATTGCGGAGGGAGCTTATAATGTTGTGGGTGAACCTTTCTTTTTAATTTCTTCATTATGTTTATCTTTCATTTTCTCCTTGTTTGGCATGAAGCTGTAATCTTAATCTGATTTTGTCTCCAGTCGAGACAATCTTTGCAAGAACTGCAAGCGTCCTGGCCACTTTGCAAGAGAATGCCCTAATGTGGCAATTTGTCACAACTGTGGTCTCCCTGGGTAAGGGAACTTGATCTTATGCTTATTGCCTTTGCCGCTTGTTTGGATACATTTTATTGTGAGAATCCTCGTTTTGTACTAAACTAAGGGCGTGTTTGGATTACTCGCCCGTTTAAGCCTGGTTTTTAAAATTATTTTCAATATAATTTTTTTTTTTTTTTTTTTTTGCATTCTGTTAATTAGAAATGTGTTTTTTTGCTAAATATTTTTTAGATTTTCCTTTAATCATTTATGAAACAATTTTGGACAATCTATCTACGGTGTTTCTTCAATCTATCTTTACATTGATCCAACTTTTTAAGTGATTGTTATTTAGTTTGTGATTGTGATCGTTTCAGAAATGCCTCAACTTTTTTTTAAGTGATTGTGATGATATAAAATCACACAATAAGCTATGCTTGACATGTCTAAAATGATTTAACTTTTCAATGGTACTTAAAGAATAGTCGAGTTATTCCAAATATACATTAAATATTCACGATTCTACTTATTTTCTGGCATTGCAAAGGGTGGGTTGTTATTTTCCATTCTACTTGACATTAAATTTACGGATTTGGTCCTATGCTATCATGTCATTGGCGTGGAGTATTCAATCTTGTAGCCTCTAATCAACAGTTTCACCAATCTTAAAATTCAGAATTTGAGATTTGAAGTTGAGTCGAGTATATAATTGGGAGATACAATTGAAGCAGTTGTTCTGTCATTGAATCAAATTATAGTTTGCTTATTGGCATACATTTGATAGAACAATGACACTCGTTTTTCTTTATAGCTTACTTTTCTATGTATAAATTTGTGATACTGCATCTAGGCATATTGCTTCAGAGTGCACAACGAAGTCACTATGCTGGAATTGTCGTGAACCTGGTCATGTTGCAAGTAGCTGTTCAAATGAAGGTATCTGCCACACCTGCGGGAAGGCAGGACATCGAGCCAGGGAATGCACAGCTCCTCCGCTGCCACCCGGGGACTTGAGGCTTTGCAACAATTGCTACAAGCAGGGTCATATAGCAGCTGATTGTACTAATGAAAAGGCATGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGCGATTGTCCAAATGACCCTATTTGCAACCTGTGCAATGTATCTGGGCATGTAGCCAGGCAGTGTCCGAAATCCAATGTCCTCGGAGACCGGGGAGACCGAGGCATCGGCAGTGGCGGTGGCAGTATACGTGGTGGTGGTGGTGGTTACCGGGATGTTGTGTGCAGGACCTGCCAGCAGCTTGGCCATATGAGTAGGGATTGCATGAGCCCTTTGATGATTTGCCATAACTGTGGGGGACGTGGTCACCTAGCATACGAATGCCCATCAGGTCGGTTTATGGAGCGTTATCCCAGGAGGTACTGAAGACGTGATTAGGAAGAGGCCTTCGGATTTTGCTTCGAGTTTAGACATTTTGGGAACTAAACTCTATAGATTGCTCTGCTCTGCTTGCTGCGTGCTGCTTGCTGCTTGCTGCTTACATGGGTAGTATTTGCTCATGTTGTTACCAAACATTGTTTTGTGGGTTAGACCATGAATTTTTAGTATTGTTTATCTTGCTTCTATAATATAATACGACTTCCTTTCAATGGTTCATTAGTTTAGTTTGTTGATTTCACTCTTAATGAAATTTCCTTGTAAAGTATGAACTTCGACTTGCATTTGAGATGCTTGTTATCAACGACGTTGTGA ATGAGTTCGGATAGCAGGAGTCGAAGCAGGAGCAGAAGCAGGAGCCCAGTGGCTCGTAAGATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATCACGTCGGGGTTTCAGTCGAGACAATCTTTGCAAGAACTGCAAGCGTCCTGGCCACTTTGCAAGAGAATGCCCTAATGTGGCAATTTGTCACAACTGTGGTCTCCCTGGGCATATTGCTTCAGAGTGCACAACGAAGTCACTATGCTGGAATTGTCGTGAACCTGGTCATGTTGCAAGTAGCTGTTCAAATGAAGGTATCTGCCACACCTGCGGGAAGGCAGGACATCGAGCCAGGGAATGCACAGCTCCTCCGCTGCCACCCGGGGACTTGAGGCTTTGCAACAATTGCTACAAGCAGGGTCATATAGCAGCTGATTGTACTAATGAAAAGGCATGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGCGATTGTCCAAATGACCCTATTTGCAACCTGTGCAATGTATCTGGGCATGTAGCCAGGCAGTGTCCGAAATCCAATGTCCTCGGAGACCGGGGAGACCGAGGCATCGGCAGTGGCGGTGGCAGTATACGTGGTGGTGGTGGTGGTTACCGGGATGTTGTGTGCAGGACCTGCCAGCAGCTTGGCCATATGAGTAGGGATTGCATGAGCCCTTTGATGATTTGCCATAACTGTGGGGGACGTGGTCACCTAGCATACGAATGCCCATCAGGTCGGTTTATGGAGCGTTATCCCAGGAGTATGAACTTCGACTTGCATTTGAGATGCTTGTTATCAACGACGTTGTGA ATGAGTTCGGATAGCAGGAGTCGAAGCAGGAGCAGAAGCAGGAGCCCAGTGGCTCGTAAGATCCGGTCTGATCGTTTTTCATATCGTGATGCACCATACAGGAGAGAATCACGTCGGGGTTTCAGTCGAGACAATCTTTGCAAGAACTGCAAGCGTCCTGGCCACTTTGCAAGAGAATGCCCTAATGTGGCAATTTGTCACAACTGTGGTCTCCCTGGGCATATTGCTTCAGAGTGCACAACGAAGTCACTATGCTGGAATTGTCGTGAACCTGGTCATGTTGCAAGTAGCTGTTCAAATGAAGGTATCTGCCACACCTGCGGGAAGGCAGGACATCGAGCCAGGGAATGCACAGCTCCTCCGCTGCCACCCGGGGACTTGAGGCTTTGCAACAATTGCTACAAGCAGGGTCATATAGCAGCTGATTGTACTAATGAAAAGGCATGCAACAATTGCAGGAAGACAGGCCATCTTGCTCGCGATTGTCCAAATGACCCTATTTGCAACCTGTGCAATGTATCTGGGCATGTAGCCAGGCAGTGTCCGAAATCCAATGTCCTCGGAGACCGGGGAGACCGAGGCATCGGCAGTGGCGGTGGCAGTATACGTGGTGGTGGTGGTGGTTACCGGGATGTTGTGTGCAGGACCTGCCAGCAGCTTGGCCATATGAGTAGGGATTGCATGAGCCCTTTGATGATTTGCCATAACTGTGGGGGACGTGGTCACCTAGCATACGAATGCCCATCAGGTCGGTTTATGGAGCGTTATCCCAGGAGTATGAACTTCGACTTGCATTTGAGATGCTTGTTATCAACGACGTTGTGA MSSDSRSRSRSRSRSPVARKIRSDRFSYRDAPYRRESRRGFSRDNLCKNCKRPGHFARECPNVAICHNCGLPGHIASECTTKSLCWNCREPGHVASSCSNEGICHTCGKAGHRARECTAPPLPPGDLRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNDPICNLCNVSGHVARQCPKSNVLGDRGDRGIGSGGGSIRGGGGGYRDVVCRTCQQLGHMSRDCMSPLMICHNCGGRGHLAYECPSGRFMERYPRSMNFDLHLRCLLSTTL Homology
BLAST of CmaCh11G010780 vs. ExPASy Swiss-Prot
Match: P53849 (Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GIS2 PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.4e-25 Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of CmaCh11G010780 vs. ExPASy Swiss-Prot
Match: P36627 (Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=byr3 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.6e-22 Identity = 63/189 (33.33%), Postives = 82/189 (43.39%), Query Frame = 0
BLAST of CmaCh11G010780 vs. ExPASy Swiss-Prot
Match: Q3T0Q6 (Cellular nucleic acid-binding protein OS=Bos taurus OX=9913 GN=CNBP PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 7.3e-22 Identity = 61/167 (36.53%), Postives = 80/167 (47.90%), Query Frame = 0
BLAST of CmaCh11G010780 vs. ExPASy Swiss-Prot
Match: O42395 (Cellular nucleic acid-binding protein OS=Gallus gallus OX=9031 GN=CNBP PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.6e-21 Identity = 61/169 (36.09%), Postives = 80/169 (47.34%), Query Frame = 0
BLAST of CmaCh11G010780 vs. ExPASy Swiss-Prot
Match: P62633 (Cellular nucleic acid-binding protein OS=Homo sapiens OX=9606 GN=CNBP PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.7e-21 Identity = 61/174 (35.06%), Postives = 80/174 (45.98%), Query Frame = 0
BLAST of CmaCh11G010780 vs. TAIR 10
Match: AT1G75560.1 (zinc knuckle (CCHC-type) family protein ) HSP 1 Score: 334.0 bits (855), Expect = 1.2e-91 Identity = 164/260 (63.08%), Postives = 193/260 (74.23%), Query Frame = 0
BLAST of CmaCh11G010780 vs. TAIR 10
Match: AT1G75560.2 (zinc knuckle (CCHC-type) family protein ) HSP 1 Score: 334.0 bits (855), Expect = 1.2e-91 Identity = 164/260 (63.08%), Postives = 193/260 (74.23%), Query Frame = 0
BLAST of CmaCh11G010780 vs. TAIR 10
Match: AT4G36020.1 (cold shock domain protein 1 ) HSP 1 Score: 97.4 bits (241), Expect = 1.8e-20 Identity = 72/236 (30.51%), Postives = 93/236 (39.41%), Query Frame = 0
BLAST of CmaCh11G010780 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 ) HSP 1 Score: 83.2 bits (204), Expect = 3.6e-16 Identity = 63/195 (32.31%), Postives = 82/195 (42.05%), Query Frame = 0
BLAST of CmaCh11G010780 vs. TAIR 10
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein ) HSP 1 Score: 72.8 bits (177), Expect = 4.9e-13 Identity = 59/228 (25.88%), Postives = 84/228 (36.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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