CmaCh11G000790 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGTGTGCTCAAGCAAGGGTGGGAGCAATATTTGTGATGATGATGTTGGAGGATTGAAAGAAAAGATAAGGCTGCTTAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAAAGAGGTCAAAGCCCATGAAAAGGACATGGTGGTGTTTGCATTTAAGGAAGCAGATTGGAAAACAGAGAAGAAGAAACTCAGAGAGGAGGTGAAGATGCTGAGGAAGAGGGTAAAAGAGAGGATGACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGCATGGGAGATTGAAAGAACTCCAAATACCATCTTTGAGCAGGTACAACAGGAAAGAGCACGCAGAGATGAAGCCATTGAGAAATGGAAGCAACTTTATCACGCTATCAAGATTGAGCTCGATGACCTAATTCAGAGAACACATAATGGTATGCCCATTCTAAATTTCCTTTTGTTTCTAAATTTTATAGTCTCTCGTTTTAAGGTGATGATATATGTCTTAACCAATTAAACTAGGTTTGAGTTGAGAATTTAAGGTAAGTCGAGCACATTCGATTTTTGATCGGATCACTAACAGGCACTCAATACTTGCTTTGATAGGAGATGGATTGTACTGGGGAGCGAACGAGAGAACAGAAGCACTACAAACGGAATTGCTAGCAAAGGAGGAGACCATAAAGGCCCTCAAAGAACAAGTGGCTTCAATGGAGCAAGAAAAATACAAGAGAGTCACAGAAATTGACATACTGAGGCAAAGCTTAAGAATTATGACCAGTAAGAAGGAAAAATAGATAGACACCTTCCATAGCTGTGTTTGTAAGTAGCCTGCCAGTGAAGTAAGGAGCACGAAAACAGAAGTTCCAATGAAAAGCCAATTGAAAGTGTTACTAGAAGCAAATGCATCCAGGAAGCTATTAGTTTTGCACCCCCACCCTTAATTTCAACCCAACTGTTACTTTCATAATCATTTCGTTGGGATGGTCCAATAGGTAAACTTTTTTGTTCTATAGACTGCAATGTTGAGAAAGTTCCAAAAAAAAAGAGAAAAAAGGGGCTTATCCTGACAGGAAGAAAAAATGGCGCATCAAATGTTCTCATTGAAATTTAGTGATAGCTTAATTTCTCTCGATTC ATGGGTGTGTGCTCAAGCAAGGGTGGGAGCAATATTTGTGATGATGATGTTGGAGGATTGAAAGAAAAGATAAGGCTGCTTAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAAAGAGGTCAAAGCCCATGAAAAGGACATGGTGGTGTTTGCATTTAAGGAAGCAGATTGGAAAACAGAGAAGAAGAAACTCAGAGAGGAGGTGAAGATGCTGAGGAAGAGGGTAAAAGAGAGGATGACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGCATGGGAGATTGAAAGAACTCCAAATACCATCTTTGAGCAGGTACAACAGGAAAGAGCACGCAGAGATGAAGCCATTGAGAAATGGAAGCAACTTTATCACGCTATCAAGATTGAGCTCGATGACCTAATTCAGAGAACACATAATGGAGATGGATTGTACTGGGGAGCGAACGAGAGAACAGAAGCACTACAAACGGAATTGCTAGCAAAGGAGGAGACCATAAAGGCCCTCAAAGAACAAGTGGCTTCAATGGAGCAAGAAAAATACAAGAGAGTCACAGAAATTGACATACTGAGGCAAAGCTTAAGAATTATGACCAGTAAGAAGGAAAAATAGATAGACACCTTCCATAGCTGTGTTTGTAAGTAGCCTGCCAGTGAAGTAAGGAGCACGAAAACAGAAGTTCCAATGAAAAGCCAATTGAAAGTGTTACTAGAAGCAAATGCATCCAGGAAGCTATTAGTTTTGCACCCCCACCCTTAATTTCAACCCAACTGTTACTTTCATAATCATTTCGTTGGGATGGTCCAATAGGTAAACTTTTTTGTTCTATAGACTGCAATGTTGAGAAAGTTCCAAAAAAAAAGAGAAAAAAGGGGCTTATCCTGACAGGAAGAAAAAATGGCGCATCAAATGTTCTCATTGAAATTTAGTGATAGCTTAATTTCTCTCGATTC ATGGGTGTGTGCTCAAGCAAGGGTGGGAGCAATATTTGTGATGATGATGTTGGAGGATTGAAAGAAAAGATAAGGCTGCTTAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAAAGAGGTCAAAGCCCATGAAAAGGACATGGTGGTGTTTGCATTTAAGGAAGCAGATTGGAAAACAGAGAAGAAGAAACTCAGAGAGGAGGTGAAGATGCTGAGGAAGAGGGTAAAAGAGAGGATGACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGCATGGGAGATTGAAAGAACTCCAAATACCATCTTTGAGCAGGTACAACAGGAAAGAGCACGCAGAGATGAAGCCATTGAGAAATGGAAGCAACTTTATCACGCTATCAAGATTGAGCTCGATGACCTAATTCAGAGAACACATAATGGAGATGGATTGTACTGGGGAGCGAACGAGAGAACAGAAGCACTACAAACGGAATTGCTAGCAAAGGAGGAGACCATAAAGGCCCTCAAAGAACAAGTGGCTTCAATGGAGCAAGAAAAATACAAGAGAGTCACAGAAATTGACATACTGAGGCAAAGCTTAAGAATTATGACCAGTAAGAAGGAAAAATAG MGVCSSKGGSNICDDDVGGLKEKIRLLREEVRGVMSEMDKEVKAHEKDMVVFAFKEADWKTEKKKLREEVKMLRKRVKERMTEIEEGNFGEKTATAWEIERTPNTIFEQVQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGANERTEALQTELLAKEETIKALKEQVASMEQEKYKRVTEIDILRQSLRIMTSKKEK Homology
BLAST of CmaCh11G000790 vs. ExPASy Swiss-Prot
Match: Q8IIG7 (Uncharacterized protein PF11_0207 OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF11_0207 PE=1 SV=2) HSP 1 Score: 46.6 bits (109), Expect = 4.0e-04 Identity = 52/196 (26.53%), Postives = 103/196 (52.55%), Query Frame = 0
BLAST of CmaCh11G000790 vs. TAIR 10
Match: AT3G23930.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins in 646 species: Archae - 82; Bacteria - 826; Metazoa - 5047; Fungi - 759; Plants - 314; Viruses - 86; Other Eukaryotes - 3525 (source: NCBI BLink). ) HSP 1 Score: 111.7 bits (278), Expect = 7.1e-25 Identity = 93/221 (42.08%), Postives = 128/221 (57.92%), Query Frame = 0
BLAST of CmaCh11G000790 vs. TAIR 10
Match: AT4G13540.1 (unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23930.1); Has 4658 Blast hits to 3455 proteins in 431 species: Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi - 436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783 (source: NCBI BLink). ) HSP 1 Score: 99.0 bits (245), Expect = 4.8e-21 Identity = 75/203 (36.95%), Postives = 115/203 (56.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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