CmaCh10G004370 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCATCAGGGCTGTTTCCATTCTCGCTTTGCTGCTTGCTCTGTCCGTCATTGTATCAGAAAGCCGCGTCGCAAGGATGGATTTGGGCCTCGACCTCGGCGGAGTTGGCGTCGGTATTGGCACCGGCGTGGGGTTGGGGTTGGGTGGCAGTGGCTCCGGATCTGGGTCTGGGTCTGGCTCCGGATCTGGGTCCAGCTCTGCTTCGTCATCGCACTCCTCAAGCTCCAGCTCTGGCTCTGGCTCTGACACTGGGTCCGAAGCTGGTTCGTACGCCGGCTCTTACGCTGGGTCGGGTGGAAACAGAAACAGGGGATCTGGATCTGGGTCGGGGTCGGGGTCAGGATATGGTGCGGGTTCTGGCAGGGGAAGCGGCTCTGGCGGCGGGGAAGGATATGGAGAGGGGCACGGGTACGGCGAGGGGCATGGTTATGGGAATGACGGCGAAAACTGAGATAAAAAATGTTATGAAATAAGGATAATCATCGTCTTATTTGTGTGGATAGATGAATAAAGGCTATGGATGATGATGAATCCCTGATTATGTTCTTGCTTTGTTCTTCCACCCAGTTTGAATCATGTAGTATCTCTGTATGCAGTACTTAATAAAATTTGGATTCATCAACTTCATGTTTTTTTCTCTGTGGTCATTTTCGTGGACATTTATATTGACATTTCTACAACCCTACTTTATATCATTATCTCGGACCAAAAGCATTCTCCTCCGCTTTATATTGGTACACATATTTTTTACCAGAACAAGTACATTAGCTAATTAAGGAGATGATCATCAGTCATGAGAACTTATAGTTTTAATACCAAACTTATGTAATATTGATCATACATGCATATCTTTGGTTTTAAAATTTTTTTTAGAAGATTTTTACTATTAATTTATCATTTTAACAACTAAGATGCTAAGCTTGTTACACATGAACTGAACCATAAATATTTATTGAACATCTAATGAGTCTAAAAAAACAAACTAACTAACCTTAAAATATTTGAATGTCAAGGAAATTCTTAAACGGTAAGTTGTAAGACCATGTATATATGAGGCTTGATACCTATCCAAGGTTGGAAAGTCAATGAAGTTGGTGTATTCTTTGGATAAACACAAGTGCCCCAAATCGCGCTGGCGTTTCGAACGCGTAGATGGGCCAAAGAGGTGAATGAAAGTGGCTACCATATATTCAACTAAATCCCTCCCTCTAAACTTTTTGCCGTGCTTTTTTTTTTTTTTTTTTCTTAATTAGATAGACACGACATCCATGAACGGCTATCGGATTGGAGTCCACTAAACTTAGTGGGCAAACCGACGGAGAGGGCGTCGGCAACCAATATTATTGAATAA ATGGCTTCCATCAGGGCTGTTTCCATTCTCGCTTTGCTGCTTGCTCTGTCCGTCATTGTATCAGAAAGCCGCGTCGCAAGGATGGATTTGGGCCTCGACCTCGGCGGAGTTGGCGTCGGTATTGGCACCGGCGTGGGGTTGGGGTTGGGTGGCAGTGGCTCCGGATCTGGGTCTGGGTCTGGCTCCGGATCTGGGTCCAGCTCTGCTTCGTCATCGCACTCCTCAAGCTCCAGCTCTGGCTCTGGCTCTGACACTGGGTCCGAAGCTGGTTCGTACGCCGGCTCTTACGCTGGGTCGGGTGGAAACAGAAACAGGGGATCTGGATCTGGGTCGGGGTCGGGGTCAGGATATGGTGCGGGTTCTGGCAGGGGAAGCGGCTCTGGCGGCGGGGAAGGATATGGAGAGGGGCACGGGTACGGCGAGGGGCATGATAGACACGACATCCATGAACGGCTATCGGATTGGAGTCCACTAAACTTAGTGGGCAAACCGACGGAGAGGGCGTCGGCAACCAATATTATTGAATAA ATGGCTTCCATCAGGGCTGTTTCCATTCTCGCTTTGCTGCTTGCTCTGTCCGTCATTGTATCAGAAAGCCGCGTCGCAAGGATGGATTTGGGCCTCGACCTCGGCGGAGTTGGCGTCGGTATTGGCACCGGCGTGGGGTTGGGGTTGGGTGGCAGTGGCTCCGGATCTGGGTCTGGGTCTGGCTCCGGATCTGGGTCCAGCTCTGCTTCGTCATCGCACTCCTCAAGCTCCAGCTCTGGCTCTGGCTCTGACACTGGGTCCGAAGCTGGTTCGTACGCCGGCTCTTACGCTGGGTCGGGTGGAAACAGAAACAGGGGATCTGGATCTGGGTCGGGGTCGGGGTCAGGATATGGTGCGGGTTCTGGCAGGGGAAGCGGCTCTGGCGGCGGGGAAGGATATGGAGAGGGGCACGGGTACGGCGAGGGGCATGATAGACACGACATCCATGAACGGCTATCGGATTGGAGTCCACTAAACTTAGTGGGCAAACCGACGGAGAGGGCGTCGGCAACCAATATTATTGAATAA MASIRAVSILALLLALSVIVSESRVARMDLGLDLGGVGVGIGTGVGLGLGGSGSGSGSGSGSGSGSSSASSSHSSSSSSGSGSDTGSEAGSYAGSYAGSGGNRNRGSGSGSGSGSGYGAGSGRGSGSGGGEGYGEGHGYGEGHDRHDIHERLSDWSPLNLVGKPTERASATNIIE Homology
BLAST of CmaCh10G004370 vs. ExPASy TrEMBL
Match: A0A6J1E1T0 (glycine-rich cell wall structural protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111430015 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 4.4e-39 Identity = 131/142 (92.25%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of CmaCh10G004370 vs. ExPASy TrEMBL
Match: A0A6J1E521 (putative glycine-rich cell wall structural protein 1 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111430014 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 1.2e-28 Identity = 111/144 (77.08%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of CmaCh10G004370 vs. ExPASy TrEMBL
Match: A0A6J1JHN1 (glycine-rich cell wall structural protein 2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111485793 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.0e-27 Identity = 127/173 (73.41%), Postives = 129/173 (74.57%), Query Frame = 0
BLAST of CmaCh10G004370 vs. ExPASy TrEMBL
Match: A0A6P5XT71 (putative glycine-rich cell wall structural protein 1 OS=Durio zibethinus OX=66656 GN=LOC111285959 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.7e-27 Identity = 113/156 (72.44%), Postives = 126/156 (80.77%), Query Frame = 0
BLAST of CmaCh10G004370 vs. ExPASy TrEMBL
Match: A0A7N2L1G7 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 8.5e-27 Identity = 109/151 (72.19%), Postives = 128/151 (84.77%), Query Frame = 0
BLAST of CmaCh10G004370 vs. NCBI nr
Match: XP_022921884.1 (glycine-rich cell wall structural protein 2-like [Cucurbita moschata] >KAG6589744.1 hypothetical protein SDJN03_15167, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 171.0 bits (432), Expect = 9.0e-39 Identity = 131/142 (92.25%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of CmaCh10G004370 vs. NCBI nr
Match: XP_038879815.1 (putative per-hexamer repeat protein 5 [Benincasa hispida]) HSP 1 Score: 152.5 bits (384), Expect = 3.3e-33 Identity = 120/147 (81.63%), Postives = 127/147 (86.39%), Query Frame = 0
BLAST of CmaCh10G004370 vs. NCBI nr
Match: XP_023515818.1 (putative glycine-rich cell wall structural protein 1 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 139.0 bits (349), Expect = 3.8e-29 Identity = 119/158 (75.32%), Postives = 123/158 (77.85%), Query Frame = 0
BLAST of CmaCh10G004370 vs. NCBI nr
Match: XP_022921883.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita moschata]) HSP 1 Score: 136.3 bits (342), Expect = 2.5e-28 Identity = 111/144 (77.08%), Postives = 123/144 (85.42%), Query Frame = 0
BLAST of CmaCh10G004370 vs. NCBI nr
Match: XP_023515819.1 (putative glycine-rich cell wall structural protein 1 isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 136.3 bits (342), Expect = 2.5e-28 Identity = 111/144 (77.08%), Postives = 122/144 (84.72%), Query Frame = 0
BLAST of CmaCh10G004370 vs. TAIR 10
Match: AT4G30460.1 (glycine-rich protein ) HSP 1 Score: 104.8 bits (260), Expect = 7.4e-23 Identity = 98/150 (65.33%), Postives = 110/150 (73.33%), Query Frame = 0
BLAST of CmaCh10G004370 vs. TAIR 10
Match: AT4G30450.1 (glycine-rich protein ) HSP 1 Score: 72.8 bits (177), Expect = 3.1e-13 Identity = 65/104 (62.50%), Postives = 83/104 (79.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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