Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTTTTTTTTTTTTGGGGAACGTTTTTGTTTACTGGAAAATTGTAAATTTATGAAATTGGAGGGAGGGTCGTAAACGGAATCCGACATTGAGCAACAGAGTTCGAGAAGAATCCATGGTGGCCATTTCCCTTTACAGAGGGAACCTCCACAGGGTCCCCGATGTGCCTCGTCGCTGGCTTATGCCGATCCACAACATTTCTATTAGAGACTTCAAATCCCTTCTGCACCGTCGTTCAAAAGCCCTCTCTCGCCTCTTCGCCACCGCCTCTTCTTCTCCGGCTAAAGTTTCTACTTCCCCTAACTCTAATCCTATTTCGAATTCTTTAATCAAACCAGACGTTGAAGGACCTAGAAATAATGCGTCTGCTCCTGAGGTGCCATTGGAAACTGAAAGGGTTGGTGTTGGTGATGAAAGACCTTCTGCGCATGTTAAGAAGAGGAAGAAGTCGGACATTGGCGATGATTGTTTGGGGAAATCGACTGAGGGGTTTGATTCTGTGAATGGAACAAAACCTTGTTTTATTGATCAAGGTTCTGATCCAGTGGAAAATGGTGGCGCGCATTCTAACGAGGAAAATCATGCTGTATTAGAAAACCCTAACAAAGAGGTATGGATTATGACCACCTCCATTAATTTTCAAGTATGCTTGAAGTCTATCGATCTTACCTGAGTTCCAAATTTTAGTGGTCGTATGACAGTTTTTTTGGCTCGTCCTGAATTTTGGCGCGGTTGTGTTTTTGTTGTTATTATCATTATTGTTCTACATGGTGAGTTATTTTTGTTACATCTAAAATAAAGTGATTACTATTTAACGAGGCTTTCAGATGTTTGGGAATGTTTTGAGATAACCATTGTTAACTGTATGTGAAGCTTGTAAATTTTGTTGAGCGTTCTTGTTGGTATAAGAAAGTTGAGGTAGATGGAAGTAAAATCAAGAAGAGCTTCCAAGTTTCTTGTCAATATAGATCTCGTGCCTCGACACCAGCATCGGATTTCTTTCGTTTTACCTTCTCCATTAATGTGTGTCACTGTGTTAGGCAAATGAGGATTTGTTAGATGTCGAGGAGAACAGGAAAAAGGAAGTTGAAGAGAAGCTAAAAGTTTTGAATGAGACAACACATAATCTTGTGCAAGTGTTAAAACAGGTATGTTACTGATCCTTCTACCTTGCCCGTCCGCTACCAAAATCCCCTTAACTACCTATGGGATTGATAAGTGAAGTAGGTCATTTTCTTGGTGTTGGTTGACAGATCTTCCATGTGGAAGAGGAAGTAAAAAGGCGTAGGAGTTTGCAAGGGACAGAAATTCGCGCTTCTGCTCCTCCTCTTCAAGTGGATGCCTCAGCCGATACGGGGTCGATGACCAGACCGCTTGCTCCTAGGGTAGCCACAGAAGTGAATGCTAATGGAGATACTGAAGGTGGAGAAGCTGATGATCTTTTGAACCAGAATGTTCCTTCAGAGTCTCCTCTTAGAAGGCCTGCCCACATACAACCTAATATGGTAATTGGTGTCACTATGACTTCCGTCGATTTCATTATAGCTTTATATGAGTTCATGATCAGTATCCTTGTTTTGTTGACTTTATGAGTGATTTTGCCTCTGGAACGTAAGAATAATTTTTATTGATATTTTAGTCATTTGAATCACTGAACTTGCTCATACAAGATTTTATTTCTTTCTTGTGGGGGTGAGGGGTGGCCAGGTAAGAATGTACAGTTCCCATGACTTATTACAATGTTCATAAGTAGCATAAATTGAGAAAGGAAAAAAAAAATATAATCAAAGGGCTCAGTTGGAGGATGTGAGATTCCACATCGGTTGGAGAAGAGAACGAAACATTCTTTATAAAGGTGTGAAAACCTCTTCCTAGCAGACGCGTTCTAAAATTTTGAGGAGAAGCCTGGAAAAGGACAATATCTGCTAGCGGTGAGCTTGGGCTGTTATAGAGATGCTTTTGAATTCTCCTTAGGAAGAAGGGCAAAGTTTTAGAATAATAGATTTTTTAGAGAGATTGAGAGGTCGGGTGAGGAAGTTTGGTGTGTGCCACTCGGCTTTTTCTCGACCATGAGCTTGGTCATGTTCTTTTGAATTGGAGTCACTTTTCTGTAGATAATCTCAGACTTTTTTTCGCCTTGTTGGAGCTTGTTCTTTTATATGGCCGGTATGAATCAATAACATTTTTAGTACCTTTAAATTCATTATAAAACTTCTTTGAAATTCCTATCAAAATTATGATCTTTTACATTAAACTATCAGCTTCAGAGTTCTAGGCGGTTCTTTGTTGGTTTGCATTCTGTGTCAGTCTAGATGTCTACCGAGAAAAAAATGTATCACTCAAGTTTAAACCATACCATCTCCTCTATGCTTGATGCGAAAAATCAAGCCTCATTCATATGTTTTTATCATTTTTCTAGTGAAGTAAAATACCATCATGTGCAGGGCTTGCATCCATCCCGAACAAATTTTAGCCTTACTGGAAGCCCGTCGTGTTTACCTCCGGCTGGGCAATCTGGGCTTCCTCCAAACCTGCCCACACTATCTGTATCTGGGACCAACTACATTGCATTCTCACATTCTCCTGCAGCATCTGGGGGCACTTCAGTTCTCAGAGATGCTCGGCAGCCTAGCCCATGGAATTAG
mRNA sequence
TTTTTTTTTTTTTTTTGGGGAACGTTTTTGTTTACTGGAAAATTGTAAATTTATGAAATTGGAGGGAGGGTCGTAAACGGAATCCGACATTGAGCAACAGAGTTCGAGAAGAATCCATGGTGGCCATTTCCCTTTACAGAGGGAACCTCCACAGGGTCCCCGATGTGCCTCGTCGCTGGCTTATGCCGATCCACAACATTTCTATTAGAGACTTCAAATCCCTTCTGCACCGTCGTTCAAAAGCCCTCTCTCGCCTCTTCGCCACCGCCTCTTCTTCTCCGGCTAAAGTTTCTACTTCCCCTAACTCTAATCCTATTTCGAATTCTTTAATCAAACCAGACGTTGAAGGACCTAGAAATAATGCGTCTGCTCCTGAGGTGCCATTGGAAACTGAAAGGGTTGGTGTTGGTGATGAAAGACCTTCTGCGCATGTTAAGAAGAGGAAGAAGTCGGACATTGGCGATGATTGTTTGGGGAAATCGACTGAGGGGTTTGATTCTGTGAATGGAACAAAACCTTGTTTTATTGATCAAGGTTCTGATCCAGTGGAAAATGGTGGCGCGCATTCTAACGAGGAAAATCATGCTGTATTAGAAAACCCTAACAAAGAGGCAAATGAGGATTTGTTAGATGTCGAGGAGAACAGGAAAAAGGAAGTTGAAGAGAAGCTAAAAGTTTTGAATGAGACAACACATAATCTTGTGCAAGTGTTAAAACAGATCTTCCATGTGGAAGAGGAAGTAAAAAGGCGTAGGAGTTTGCAAGGGACAGAAATTCGCGCTTCTGCTCCTCCTCTTCAAGTGGATGCCTCAGCCGATACGGGGTCGATGACCAGACCGCTTGCTCCTAGGGTAGCCACAGAAGTGAATGCTAATGGAGATACTGAAGGTGGAGAAGCTGATGATCTTTTGAACCAGAATGTTCCTTCAGAGTCTCCTCTTAGAAGGCCTGCCCACATACAACCTAATATGGGCTTGCATCCATCCCGAACAAATTTTAGCCTTACTGGAAGCCCGTCGTGTTTACCTCCGGCTGGGCAATCTGGGCTTCCTCCAAACCTGCCCACACTATCTGTATCTGGGACCAACTACATTGCATTCTCACATTCTCCTGCAGCATCTGGGGGCACTTCAGTTCTCAGAGATGCTCGGCAGCCTAGCCCATGGAATTAG
Coding sequence (CDS)
ATGGTGGCCATTTCCCTTTACAGAGGGAACCTCCACAGGGTCCCCGATGTGCCTCGTCGCTGGCTTATGCCGATCCACAACATTTCTATTAGAGACTTCAAATCCCTTCTGCACCGTCGTTCAAAAGCCCTCTCTCGCCTCTTCGCCACCGCCTCTTCTTCTCCGGCTAAAGTTTCTACTTCCCCTAACTCTAATCCTATTTCGAATTCTTTAATCAAACCAGACGTTGAAGGACCTAGAAATAATGCGTCTGCTCCTGAGGTGCCATTGGAAACTGAAAGGGTTGGTGTTGGTGATGAAAGACCTTCTGCGCATGTTAAGAAGAGGAAGAAGTCGGACATTGGCGATGATTGTTTGGGGAAATCGACTGAGGGGTTTGATTCTGTGAATGGAACAAAACCTTGTTTTATTGATCAAGGTTCTGATCCAGTGGAAAATGGTGGCGCGCATTCTAACGAGGAAAATCATGCTGTATTAGAAAACCCTAACAAAGAGGCAAATGAGGATTTGTTAGATGTCGAGGAGAACAGGAAAAAGGAAGTTGAAGAGAAGCTAAAAGTTTTGAATGAGACAACACATAATCTTGTGCAAGTGTTAAAACAGATCTTCCATGTGGAAGAGGAAGTAAAAAGGCGTAGGAGTTTGCAAGGGACAGAAATTCGCGCTTCTGCTCCTCCTCTTCAAGTGGATGCCTCAGCCGATACGGGGTCGATGACCAGACCGCTTGCTCCTAGGGTAGCCACAGAAGTGAATGCTAATGGAGATACTGAAGGTGGAGAAGCTGATGATCTTTTGAACCAGAATGTTCCTTCAGAGTCTCCTCTTAGAAGGCCTGCCCACATACAACCTAATATGGGCTTGCATCCATCCCGAACAAATTTTAGCCTTACTGGAAGCCCGTCGTGTTTACCTCCGGCTGGGCAATCTGGGCTTCCTCCAAACCTGCCCACACTATCTGTATCTGGGACCAACTACATTGCATTCTCACATTCTCCTGCAGCATCTGGGGGCACTTCAGTTCTCAGAGATGCTCGGCAGCCTAGCCCATGGAATTAG
Protein sequence
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVSTSPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLGKSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKEVEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTRPLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSPSCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN
Homology
BLAST of CmaCh10G001670 vs. ExPASy TrEMBL
Match:
A0A6J1JH31 (uncharacterized protein LOC111485647 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485647 PE=4 SV=1)
HSP 1 Score: 684.5 bits (1765), Expect = 2.4e-193
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST
Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
Query: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG
Sbjct: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
Query: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE 180
KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE
Sbjct: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE 180
Query: 181 VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR 240
VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR
Sbjct: 181 VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR 240
Query: 241 PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP 300
PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP
Sbjct: 241 PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP 300
Query: 301 SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN 352
SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN
Sbjct: 301 SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN 351
BLAST of CmaCh10G001670 vs. ExPASy TrEMBL
Match:
A0A6J1E5W7 (uncharacterized protein LOC111429740 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429740 PE=4 SV=1)
HSP 1 Score: 630.2 bits (1624), Expect = 5.3e-177
Identity = 326/352 (92.61%), Postives = 333/352 (94.60%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST
Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
Query: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
SPNSNP SNS IKPD EG RNNASAPEVPLETERV VGDERPS H+KKRKKSDIGDDCLG
Sbjct: 61 SPNSNPNSNSSIKPDGEGLRNNASAPEVPLETERVSVGDERPSPHIKKRKKSDIGDDCLG 120
Query: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEAN-EDLLDVEENRKK 180
KS EGFD VNG +PCF +QGSDPVEN GAHSN+ENHAVLENPN+EAN EDLLDVEENRKK
Sbjct: 121 KSAEGFDCVNGPRPCFAEQGSDPVENSGAHSNQENHAVLENPNEEANEEDLLDVEENRKK 180
Query: 181 EVEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMT 240
EVEEKLKVLNET HNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQ DASADTGSMT
Sbjct: 181 EVEEKLKVLNETKHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQADASADTGSMT 240
Query: 241 RPLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGS 300
RPL+PRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMG HPSRTN S+TGS
Sbjct: 241 RPLSPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGSHPSRTNLSVTGS 300
Query: 301 PSCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN 352
PSCLPP GQSGLPPNLPTLSVSGTNYIA SHSPAASGG SVLRDARQPSPWN
Sbjct: 301 PSCLPPGGQSGLPPNLPTLSVSGTNYIASSHSPAASGGISVLRDARQPSPWN 352
BLAST of CmaCh10G001670 vs. ExPASy TrEMBL
Match:
A0A6J1JCX2 (uncharacterized protein LOC111485647 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485647 PE=4 SV=1)
HSP 1 Score: 627.1 bits (1616), Expect = 4.5e-176
Identity = 328/351 (93.45%), Postives = 328/351 (93.45%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST
Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
Query: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
SPNSNPISNSLIKPDVEGPRNN VKKRKKSDIGDDCLG
Sbjct: 61 SPNSNPISNSLIKPDVEGPRNN-----------------------VKKRKKSDIGDDCLG 120
Query: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE 180
KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE
Sbjct: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE 180
Query: 181 VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR 240
VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR
Sbjct: 181 VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR 240
Query: 241 PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP 300
PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP
Sbjct: 241 PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP 300
Query: 301 SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN 352
SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN
Sbjct: 301 SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN 328
BLAST of CmaCh10G001670 vs. ExPASy TrEMBL
Match:
A0A6J1E0L7 (uncharacterized protein LOC111429740 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429740 PE=4 SV=1)
HSP 1 Score: 617.8 bits (1592), Expect = 2.7e-173
Identity = 325/365 (89.04%), Postives = 332/365 (90.96%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST
Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
Query: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
SPNSNP SNS IKPD EG RNNASAPEVPLETERV VGDERPS H+KKRKKSDIGDDCLG
Sbjct: 61 SPNSNPNSNSSIKPDGEGLRNNASAPEVPLETERVSVGDERPSPHIKKRKKSDIGDDCLG 120
Query: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEAN-EDLLDVEENRKK 180
KS EGFD VNG +PCF +QGSDPVEN GAHSN+ENHAVLENPN+EAN EDLLDVEENRKK
Sbjct: 121 KSAEGFDCVNGPRPCFAEQGSDPVENSGAHSNQENHAVLENPNEEANEEDLLDVEENRKK 180
Query: 181 EVEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMT 240
EVEEKLKVLNET HNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQ DASADTGSMT
Sbjct: 181 EVEEKLKVLNETKHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQADASADTGSMT 240
Query: 241 RPLAPRVATEVNANGDTEGGEADDLLNQNV-------------PSESPLRRPAHIQPNMG 300
RPL+PRVATEVNANGDTEGGEADDLLNQNV SESPLRRPAHIQPNMG
Sbjct: 241 RPLSPRVATEVNANGDTEGGEADDLLNQNVLSRQMVRNCSTSPSSESPLRRPAHIQPNMG 300
Query: 301 LHPSRTNFSLTGSPSCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQ 352
HPSRTN S+TGSPSCLPP GQSGLPPNLPTLSVSGTNYIA SHSPAASGG SVLRDARQ
Sbjct: 301 SHPSRTNLSVTGSPSCLPPGGQSGLPPNLPTLSVSGTNYIASSHSPAASGGISVLRDARQ 360
BLAST of CmaCh10G001670 vs. ExPASy TrEMBL
Match:
A0A6J1E1I3 (uncharacterized protein LOC111429740 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111429740 PE=4 SV=1)
HSP 1 Score: 565.1 bits (1455), Expect = 2.1e-157
Identity = 305/365 (83.56%), Postives = 311/365 (85.21%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST
Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
Query: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
SPNSNP SNS IKPD EG RNN VKKRKKSDIGDDCLG
Sbjct: 61 SPNSNPNSNSSIKPDGEGLRNN-----------------------VKKRKKSDIGDDCLG 120
Query: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEAN-EDLLDVEENRKK 180
KS EGFD VNG +PCF +QGSDPVEN GAHSN+ENHAVLENPN+EAN EDLLDVEENRKK
Sbjct: 121 KSAEGFDCVNGPRPCFAEQGSDPVENSGAHSNQENHAVLENPNEEANEEDLLDVEENRKK 180
Query: 181 EVEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMT 240
EVEEKLKVLNET HNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQ DASADTGSMT
Sbjct: 181 EVEEKLKVLNETKHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQADASADTGSMT 240
Query: 241 RPLAPRVATEVNANGDTEGGEADDLLNQNV-------------PSESPLRRPAHIQPNMG 300
RPL+PRVATEVNANGDTEGGEADDLLNQNV SESPLRRPAHIQPNMG
Sbjct: 241 RPLSPRVATEVNANGDTEGGEADDLLNQNVLSRQMVRNCSTSPSSESPLRRPAHIQPNMG 300
Query: 301 LHPSRTNFSLTGSPSCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQ 352
HPSRTN S+TGSPSCLPP GQSGLPPNLPTLSVSGTNYIA SHSPAASGG SVLRDARQ
Sbjct: 301 SHPSRTNLSVTGSPSCLPPGGQSGLPPNLPTLSVSGTNYIASSHSPAASGGISVLRDARQ 342
BLAST of CmaCh10G001670 vs. NCBI nr
Match:
XP_022988390.1 (uncharacterized protein LOC111485647 isoform X1 [Cucurbita maxima] >XP_022988391.1 uncharacterized protein LOC111485647 isoform X1 [Cucurbita maxima])
HSP 1 Score: 684.5 bits (1765), Expect = 4.9e-193
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST
Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
Query: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG
Sbjct: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
Query: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE 180
KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE
Sbjct: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE 180
Query: 181 VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR 240
VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR
Sbjct: 181 VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR 240
Query: 241 PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP 300
PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP
Sbjct: 241 PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP 300
Query: 301 SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN 352
SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN
Sbjct: 301 SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN 351
BLAST of CmaCh10G001670 vs. NCBI nr
Match:
XP_022921485.1 (uncharacterized protein LOC111429740 isoform X2 [Cucurbita moschata])
HSP 1 Score: 630.2 bits (1624), Expect = 1.1e-176
Identity = 326/352 (92.61%), Postives = 333/352 (94.60%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST
Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
Query: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
SPNSNP SNS IKPD EG RNNASAPEVPLETERV VGDERPS H+KKRKKSDIGDDCLG
Sbjct: 61 SPNSNPNSNSSIKPDGEGLRNNASAPEVPLETERVSVGDERPSPHIKKRKKSDIGDDCLG 120
Query: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEAN-EDLLDVEENRKK 180
KS EGFD VNG +PCF +QGSDPVEN GAHSN+ENHAVLENPN+EAN EDLLDVEENRKK
Sbjct: 121 KSAEGFDCVNGPRPCFAEQGSDPVENSGAHSNQENHAVLENPNEEANEEDLLDVEENRKK 180
Query: 181 EVEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMT 240
EVEEKLKVLNET HNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQ DASADTGSMT
Sbjct: 181 EVEEKLKVLNETKHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQADASADTGSMT 240
Query: 241 RPLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGS 300
RPL+PRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMG HPSRTN S+TGS
Sbjct: 241 RPLSPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGSHPSRTNLSVTGS 300
Query: 301 PSCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN 352
PSCLPP GQSGLPPNLPTLSVSGTNYIA SHSPAASGG SVLRDARQPSPWN
Sbjct: 301 PSCLPPGGQSGLPPNLPTLSVSGTNYIASSHSPAASGGISVLRDARQPSPWN 352
BLAST of CmaCh10G001670 vs. NCBI nr
Match:
XP_022988392.1 (uncharacterized protein LOC111485647 isoform X2 [Cucurbita maxima])
HSP 1 Score: 627.1 bits (1616), Expect = 9.2e-176
Identity = 328/351 (93.45%), Postives = 328/351 (93.45%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST
Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
Query: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
SPNSNPISNSLIKPDVEGPRNN VKKRKKSDIGDDCLG
Sbjct: 61 SPNSNPISNSLIKPDVEGPRNN-----------------------VKKRKKSDIGDDCLG 120
Query: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE 180
KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE
Sbjct: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEENRKKE 180
Query: 181 VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR 240
VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR
Sbjct: 181 VEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMTR 240
Query: 241 PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP 300
PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP
Sbjct: 241 PLAPRVATEVNANGDTEGGEADDLLNQNVPSESPLRRPAHIQPNMGLHPSRTNFSLTGSP 300
Query: 301 SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN 352
SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN
Sbjct: 301 SCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQPSPWN 328
BLAST of CmaCh10G001670 vs. NCBI nr
Match:
KAG6589484.1 (hypothetical protein SDJN03_14907, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 618.6 bits (1594), Expect = 3.3e-173
Identity = 326/365 (89.32%), Postives = 333/365 (91.23%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST
Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
Query: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
SPNSNP SNS IKPD EG RNNASAPEVPLETERV VGDERPS H+KKRKKSDIGDDCLG
Sbjct: 61 SPNSNPNSNSSIKPDGEGLRNNASAPEVPLETERVSVGDERPSPHIKKRKKSDIGDDCLG 120
Query: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEAN-EDLLDVEENRKK 180
KS EGFD VNG +PCF +QGSDPVEN GAHSN+ENHAVLENPN+EAN EDLLDVEENRKK
Sbjct: 121 KSAEGFDCVNGPRPCFAEQGSDPVENSGAHSNQENHAVLENPNEEANEEDLLDVEENRKK 180
Query: 181 EVEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMT 240
EVEEKLKVLNET HNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMT
Sbjct: 181 EVEEKLKVLNETKHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMT 240
Query: 241 RPLAPRVATEVNANGDTEGGEADDLLNQNV-------------PSESPLRRPAHIQPNMG 300
RPLAPRVATEVNA+GDTEGGEADDLLNQNV SESPLRRPAHIQPNMG
Sbjct: 241 RPLAPRVATEVNADGDTEGGEADDLLNQNVLSRQMVWNCSTSPSSESPLRRPAHIQPNMG 300
Query: 301 LHPSRTNFSLTGSPSCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQ 352
HPSRTN S+TGSPSCLPP GQSGLPPNLPTLSVSGTNYIA SHSPAASGG SVLRDARQ
Sbjct: 301 SHPSRTNLSVTGSPSCLPPGGQSGLPPNLPTLSVSGTNYIASSHSPAASGGISVLRDARQ 360
BLAST of CmaCh10G001670 vs. NCBI nr
Match:
XP_022921484.1 (uncharacterized protein LOC111429740 isoform X1 [Cucurbita moschata] >KAG7023169.1 hypothetical protein SDJN02_14194 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 617.8 bits (1592), Expect = 5.6e-173
Identity = 325/365 (89.04%), Postives = 332/365 (90.96%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST
Sbjct: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
Query: 61 SPNSNPISNSLIKPDVEGPRNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIGDDCLG 120
SPNSNP SNS IKPD EG RNNASAPEVPLETERV VGDERPS H+KKRKKSDIGDDCLG
Sbjct: 61 SPNSNPNSNSSIKPDGEGLRNNASAPEVPLETERVSVGDERPSPHIKKRKKSDIGDDCLG 120
Query: 121 KSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEAN-EDLLDVEENRKK 180
KS EGFD VNG +PCF +QGSDPVEN GAHSN+ENHAVLENPN+EAN EDLLDVEENRKK
Sbjct: 121 KSAEGFDCVNGPRPCFAEQGSDPVENSGAHSNQENHAVLENPNEEANEEDLLDVEENRKK 180
Query: 181 EVEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQVDASADTGSMT 240
EVEEKLKVLNET HNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQ DASADTGSMT
Sbjct: 181 EVEEKLKVLNETKHNLVQVLKQIFHVEEEVKRRRSLQGTEIRASAPPLQADASADTGSMT 240
Query: 241 RPLAPRVATEVNANGDTEGGEADDLLNQNV-------------PSESPLRRPAHIQPNMG 300
RPL+PRVATEVNANGDTEGGEADDLLNQNV SESPLRRPAHIQPNMG
Sbjct: 241 RPLSPRVATEVNANGDTEGGEADDLLNQNVLSRQMVRNCSTSPSSESPLRRPAHIQPNMG 300
Query: 301 LHPSRTNFSLTGSPSCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASGGTSVLRDARQ 352
HPSRTN S+TGSPSCLPP GQSGLPPNLPTLSVSGTNYIA SHSPAASGG SVLRDARQ
Sbjct: 301 SHPSRTNLSVTGSPSCLPPGGQSGLPPNLPTLSVSGTNYIASSHSPAASGGISVLRDARQ 360
BLAST of CmaCh10G001670 vs. TAIR 10
Match:
AT3G47850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 57 Blast hits to 57 proteins in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )
HSP 1 Score: 179.5 bits (454), Expect = 4.7e-45
Identity = 152/375 (40.53%), Postives = 189/375 (50.40%), Query Frame = 0
Query: 1 MVAISLYRGNLHRVPDVPRRWLMPIHNISIRDFKSLLHRRSKALSRLFATASSSPAKVST 60
MVAIS+YRGNLH+VPDVPRRW+MP N+S +DFKSLLHRR KALSRL
Sbjct: 31 MVAISMYRGNLHKVPDVPRRWIMPDRNLSFKDFKSLLHRRKKALSRL-----------PL 90
Query: 61 SPNSNPISNSLIKPDVEGP-----RNNASAPEVPLETERVGVGDERPSAHVKKRKKSDIG 120
+PN N + + D E P N +S + E +R + R VK G
Sbjct: 91 NPNLNLSVKTELVTDQENPILPSEANGSSGKQKLFEVKREEICGNR----VK-------G 150
Query: 121 DDCLGKSTEGFDSVNGTKPCFIDQGSDPVENGGAHSNEENHAVLENPNKEANEDLLDVEE 180
D+ + EG S G +P + + + + +A E EA E + E
Sbjct: 151 DENNDRGFEGARSDGGDRPGRVTESKE------TDNVPHKYAAKEEETNEAAEKVPSETE 210
Query: 181 NRKKEVEEKLKVLNETTHNLVQVLKQIFHVEEEVKRRRSL--QGTEIRASAP--PLQVDA 240
++KEVEE+L+VLN HNLVQVLKQI + EEE+KRR + QGT + A+ P PL VD
Sbjct: 211 LKRKEVEERLQVLNAKKHNLVQVLKQILNAEEELKRRSYMQQQGTTV-ATRPSLPLHVDV 270
Query: 241 SADTGSMTRPLAPRVATEVNANGDTEGGEADDLLNQN--------------VPSESPLRR 300
S D+G N EGGE DD N N SESPLRR
Sbjct: 271 SNDSGG-------------NVGTHMEGGETDDAANHNNAQTRTLLRLCGASSSSESPLRR 330
Query: 301 PAHI-QPNMGLHPSRTNFSLTGSPSCLPPAGQSGLPPNLPTLSVSGTNYIAFSHSPAASG 352
A + Q NM H SR + P G S P + T+S SGTNYIA S SPA G
Sbjct: 331 AAALSQHNMVPHTSRWS----------PLVGPSQPGPAV-TVSASGTNYIASSPSPAGFG 352
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1JH31 | 2.4e-193 | 100.00 | uncharacterized protein LOC111485647 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1E5W7 | 5.3e-177 | 92.61 | uncharacterized protein LOC111429740 isoform X2 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1JCX2 | 4.5e-176 | 93.45 | uncharacterized protein LOC111485647 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1E0L7 | 2.7e-173 | 89.04 | uncharacterized protein LOC111429740 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1E1I3 | 2.1e-157 | 83.56 | uncharacterized protein LOC111429740 isoform X3 OS=Cucurbita moschata OX=3662 GN... | [more] |
Match Name | E-value | Identity | Description | |
XP_022988390.1 | 4.9e-193 | 100.00 | uncharacterized protein LOC111485647 isoform X1 [Cucurbita maxima] >XP_022988391... | [more] |
XP_022921485.1 | 1.1e-176 | 92.61 | uncharacterized protein LOC111429740 isoform X2 [Cucurbita moschata] | [more] |
XP_022988392.1 | 9.2e-176 | 93.45 | uncharacterized protein LOC111485647 isoform X2 [Cucurbita maxima] | [more] |
KAG6589484.1 | 3.3e-173 | 89.32 | hypothetical protein SDJN03_14907, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022921484.1 | 5.6e-173 | 89.04 | uncharacterized protein LOC111429740 isoform X1 [Cucurbita moschata] >KAG7023169... | [more] |
Match Name | E-value | Identity | Description | |
AT3G47850.1 | 4.7e-45 | 40.53 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |