CmaCh10G001530 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G001530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr10: 701101 .. 701794 (-)
RNA-Seq Expression	CmaCh10G001530
Synteny	CmaCh10G001530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCTGGGCCAAACCACTCTGTTTCGAATCACCATCAGAAACCCCAACAAGTTGGCCGGGATCCGCCGCCATGGCCGGAGAAGAGAGAGAAGAGAAAAGGGGTTTGATGAGGAAGAGGAGAGATGGGGTCATCTTATAAGGAAATGGGAAATGGTTGGTCTAATTAATGGGCGGAGTAAAAGCAGGGATTCTGAGGATCCAAAATTTCAGCGAGATCATAGTGGAAGGAAGAGGGTTTGTTTATTGTGATTTCATGATATTTGTGAGAGACAGAGCGAATCCAAATCCCGATGGCAGAGAAGATTAGAGAGCCACTTGTCAATTGTCGCCATGATCGGTCAAAACAGAGGGCGAAGGAAGCGAAGCAGAGTCAGAATCAAAGCACTCTGCAGATTGTCCGTACGATCTATACTATTTTATTTCTTATGATATTACTATTTTGAATCCAGTTTTCATTTTCATTTTCATTTTTAGTATAATTTTGTATTATTTAATTCAAAACAATTAAATTAGTGCAGAAGGAGCAGGGGTAAACGAAAATGGCGGCAGCTAAAGAGGAAAGCCGCCCAATGCAGCGGTGCAGAATCCAGAGAACGATACAGTGTCAGGCGGCACCCCGGTGGAGATTCTTTATTCTCAATTCATTCATACAAATTTAAAATAAAAATAAATTTATTTCAATTAAAGGGAG

mRNA sequence

ATGAATCTGGGCCAAACCACTCTGTTTCGAATCACCATCAGAAACCCCAACAAGTTGGCCGGGATCCGCCGCCATGGCCGGAGAAGAGAGAGAAGAGAAAAGGGGTTTGATGAGGAAGAGGAGAGATGGGGTCATCTTATAAGGAAATGGGAAATGGTTGGTCTAATTAATGGGCGGAGTAAAAGCAGGGATTCTGAGGATCCAAAATTTCAGCGAGATCATAGTGGAAGGAAGAGGACAGAGCGAATCCAAATCCCGATGGCAGAGAAGATTAGAGAGCCACTTGTCAATTGTCGCCATGATCGGTCAAAACAGAGGGCGAAGGAAGCGAAGCAGAGTCAGAATCAAAGCACTCTGCAGATTGTCCAAGGAGCAGGGGTAAACGAAAATGGCGGCAGCTAAAGAGGAAAGCCGCCCAATGCAGCGGTGCAGAATCCAGAGAACGATACAGTGTCAGGCGGCACCCCGGTGGAGATTCTTTATTCTCAATTCATTCATACAAATTTAAAATAAAAATAAATTTATTTCAATTAAAGGGAG

Coding sequence (CDS)

ATGAATCTGGGCCAAACCACTCTGTTTCGAATCACCATCAGAAACCCCAACAAGTTGGCCGGGATCCGCCGCCATGGCCGGAGAAGAGAGAGAAGAGAAAAGGGGTTTGATGAGGAAGAGGAGAGATGGGGTCATCTTATAAGGAAATGGGAAATGGTTGGTCTAATTAATGGGCGGAGTAAAAGCAGGGATTCTGAGGATCCAAAATTTCAGCGAGATCATAGTGGAAGGAAGAGGACAGAGCGAATCCAAATCCCGATGGCAGAGAAGATTAGAGAGCCACTTGTCAATTGTCGCCATGATCGGTCAAAACAGAGGGCGAAGGAAGCGAAGCAGAGTCAGAATCAAAGCACTCTGCAGATTGTCCAAGGAGCAGGGGTAAACGAAAATGGCGGCAGCTAA

Protein sequence

MNLGQTTLFRITIRNPNKLAGIRRHGRRRERREKGFDEEEERWGHLIRKWEMVGLINGRSKSRDSEDPKFQRDHSGRKRTERIQIPMAEKIREPLVNCRHDRSKQRAKEAKQSQNQSTLQIVQGAGVNENGGS

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh10G001530 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G001530 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G001530 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh10G001530 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G001530.1	CmaCh10G001530.1	mRNA